Query 005536
Match_columns 692
No_of_seqs 575 out of 3789
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 01:01:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 7.1E-60 1.5E-64 505.1 28.7 293 310-604 61-355 (361)
2 KOG0192 Tyrosine kinase specif 100.0 9.8E-48 2.1E-52 408.7 24.8 258 327-606 44-308 (362)
3 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-46 3.6E-51 397.9 18.1 256 326-604 208-464 (468)
4 KOG0581 Mitogen-activated prot 100.0 2.3E-44 5.1E-49 365.5 24.0 255 314-595 76-333 (364)
5 KOG0575 Polo-like serine/threo 100.0 9.5E-44 2.1E-48 380.3 27.9 246 324-595 18-267 (592)
6 KOG0595 Serine/threonine-prote 100.0 1.8E-44 3.9E-49 369.0 20.6 202 323-531 9-219 (429)
7 KOG0615 Serine/threonine prote 100.0 2.5E-44 5.3E-49 367.2 19.0 261 322-611 170-444 (475)
8 KOG1026 Nerve growth factor re 100.0 4.8E-44 1E-48 396.3 16.1 261 322-604 484-765 (774)
9 KOG0591 NIMA (never in mitosis 100.0 1.4E-44 3E-49 352.1 8.9 255 325-598 20-282 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 2.8E-43 6E-48 357.6 14.8 261 323-611 24-288 (357)
11 KOG0193 Serine/threonine prote 100.0 3.1E-43 6.8E-48 374.2 13.1 267 315-603 383-655 (678)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-42 2.4E-47 377.6 11.9 256 326-604 631-894 (996)
13 KOG1095 Protein tyrosine kinas 100.0 1.7E-41 3.7E-46 388.8 20.0 261 324-606 692-966 (1025)
14 cd05102 PTKc_VEGFR3 Catalytic 100.0 5E-41 1.1E-45 360.5 21.8 261 322-603 5-336 (338)
15 KOG0198 MEKK and related serin 100.0 3.4E-41 7.5E-46 348.3 19.6 252 324-596 17-275 (313)
16 KOG0661 MAPK related serine/th 100.0 1.1E-41 2.4E-46 353.4 15.3 267 322-596 8-290 (538)
17 PLN00113 leucine-rich repeat r 100.0 5.2E-40 1.1E-44 399.9 30.8 267 321-604 687-954 (968)
18 KOG0600 Cdc2-related protein k 100.0 1.8E-40 3.8E-45 346.8 21.7 266 325-595 118-398 (560)
19 PHA02988 hypothetical protein; 100.0 3.5E-40 7.6E-45 345.1 23.7 262 310-603 11-281 (283)
20 KOG3653 Transforming growth fa 100.0 9.3E-41 2E-45 346.2 18.3 264 327-604 213-506 (534)
21 KOG0194 Protein tyrosine kinas 100.0 6.9E-41 1.5E-45 360.8 16.6 266 316-606 149-425 (474)
22 KOG0578 p21-activated serine/t 100.0 1.5E-40 3.2E-45 353.2 17.6 249 324-596 273-522 (550)
23 KOG0593 Predicted protein kina 100.0 1E-40 2.2E-45 328.2 13.5 266 324-596 2-283 (396)
24 cd05631 STKc_GRK4 Catalytic do 100.0 9.8E-40 2.1E-44 342.0 21.7 262 325-609 1-266 (285)
25 KOG0582 Ste20-like serine/thre 100.0 1.5E-39 3.3E-44 335.1 22.2 261 323-596 25-292 (516)
26 cd05072 PTKc_Lyn Catalytic dom 100.0 2.7E-39 5.9E-44 333.4 24.0 256 323-601 5-261 (261)
27 KOG0592 3-phosphoinositide-dep 100.0 1.1E-39 2.4E-44 343.4 20.2 249 321-594 70-335 (604)
28 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-39 2.7E-44 337.5 20.1 256 323-601 4-265 (266)
29 cd05096 PTKc_DDR1 Catalytic do 100.0 5.7E-39 1.2E-43 339.2 25.5 262 324-600 5-304 (304)
30 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.3E-39 4.9E-44 333.2 20.7 251 324-598 4-255 (256)
31 KOG0616 cAMP-dependent protein 100.0 4.7E-40 1E-44 323.0 14.6 257 324-612 44-305 (355)
32 cd05068 PTKc_Frk_like Catalyti 100.0 2.1E-39 4.5E-44 334.5 20.0 257 322-601 4-261 (261)
33 cd05148 PTKc_Srm_Brk Catalytic 100.0 8E-40 1.7E-44 337.2 16.8 258 321-601 3-261 (261)
34 cd05052 PTKc_Abl Catalytic dom 100.0 2.4E-39 5.3E-44 334.5 20.4 255 324-601 6-262 (263)
35 KOG0583 Serine/threonine prote 100.0 5.9E-39 1.3E-43 344.5 23.5 256 321-609 14-280 (370)
36 cd05104 PTKc_Kit Catalytic dom 100.0 2.7E-39 5.8E-44 352.0 21.1 259 322-601 33-374 (375)
37 PF07714 Pkinase_Tyr: Protein 100.0 2E-39 4.3E-44 334.8 18.4 249 328-598 3-259 (259)
38 KOG4278 Protein tyrosine kinas 100.0 3.6E-40 7.9E-45 348.4 12.7 264 316-602 259-524 (1157)
39 KOG0605 NDR and related serine 100.0 6.7E-39 1.5E-43 338.0 22.1 267 322-614 139-455 (550)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 3.7E-39 8.1E-44 350.7 20.7 261 320-601 34-372 (374)
41 cd05595 STKc_PKB_beta Catalyti 100.0 6.4E-39 1.4E-43 342.1 22.0 240 330-595 1-249 (323)
42 cd05108 PTKc_EGFR Catalytic do 100.0 7.8E-39 1.7E-43 340.2 21.9 258 324-605 7-272 (316)
43 KOG0597 Serine-threonine prote 100.0 1.2E-39 2.7E-44 342.7 14.7 246 324-596 2-250 (808)
44 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-38 2.3E-43 330.1 21.6 255 324-601 4-265 (266)
45 cd05048 PTKc_Ror Catalytic Dom 100.0 6.8E-39 1.5E-43 334.6 20.1 256 324-601 5-283 (283)
46 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.7E-39 1.5E-43 330.1 19.6 252 324-599 4-256 (256)
47 KOG1094 Discoidin domain recep 100.0 1.1E-39 2.4E-44 344.1 13.6 264 323-601 537-804 (807)
48 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-38 2.5E-43 341.5 21.6 251 324-595 1-255 (333)
49 KOG4721 Serine/threonine prote 100.0 8.9E-40 1.9E-44 343.2 12.5 248 312-599 119-366 (904)
50 cd07848 STKc_CDKL5 Catalytic d 100.0 9.9E-39 2.2E-43 334.2 20.3 267 324-595 1-282 (287)
51 cd06649 PKc_MEK2 Catalytic dom 100.0 4.3E-38 9.4E-43 336.9 25.6 199 323-528 4-204 (331)
52 KOG0659 Cdk activating kinase 100.0 5.1E-39 1.1E-43 311.5 16.5 264 324-596 2-280 (318)
53 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-38 2.4E-43 340.3 20.8 248 330-610 1-257 (323)
54 PTZ00263 protein kinase A cata 100.0 1.6E-38 3.5E-43 339.8 21.9 255 324-609 18-276 (329)
55 cd05588 STKc_aPKC Catalytic do 100.0 3.7E-38 7.9E-43 337.1 24.2 261 330-610 1-268 (329)
56 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-38 3.5E-43 333.0 21.0 263 324-595 1-285 (290)
57 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-38 3.4E-43 327.8 20.4 254 323-600 5-259 (260)
58 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.9E-38 1.1E-42 324.0 24.0 255 322-600 4-259 (260)
59 cd05071 PTKc_Src Catalytic dom 100.0 2E-38 4.4E-43 327.6 21.1 255 323-601 5-260 (262)
60 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.7E-38 5.7E-43 346.0 22.9 262 320-602 33-398 (400)
61 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-38 3.6E-43 333.5 20.4 259 324-604 5-285 (291)
62 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-38 3.8E-43 332.8 20.4 259 324-604 5-282 (288)
63 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.6E-38 3.5E-43 333.3 20.0 263 324-595 5-283 (288)
64 cd05612 STKc_PRKX_like Catalyt 100.0 9.8E-39 2.1E-43 335.5 18.4 254 324-609 1-259 (291)
65 cd05059 PTKc_Tec_like Catalyti 100.0 1.6E-38 3.5E-43 327.0 19.5 250 325-598 5-255 (256)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 5E-38 1.1E-42 335.9 23.9 240 330-595 1-249 (328)
67 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-38 4.5E-43 338.4 20.8 249 330-610 1-258 (325)
68 cd05614 STKc_MSK2_N N-terminal 100.0 8.3E-38 1.8E-42 334.7 25.3 262 325-609 1-272 (332)
69 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-38 3.7E-43 330.8 19.4 255 324-600 5-280 (280)
70 cd05062 PTKc_IGF-1R Catalytic 100.0 1.3E-38 2.7E-43 331.7 18.3 258 321-600 3-277 (277)
71 cd05585 STKc_YPK1_like Catalyt 100.0 2.6E-38 5.6E-43 335.7 20.4 248 332-609 1-252 (312)
72 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.1E-37 2.5E-42 333.0 25.0 261 330-610 1-266 (327)
73 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-37 3.1E-42 321.5 24.9 259 324-602 2-266 (267)
74 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-38 6.8E-43 336.4 20.5 250 330-608 1-255 (321)
75 cd05069 PTKc_Yes Catalytic dom 100.0 4.4E-38 9.5E-43 324.6 20.7 253 324-600 6-259 (260)
76 cd05053 PTKc_FGFR Catalytic do 100.0 4.5E-38 9.7E-43 330.2 21.0 263 318-602 6-292 (293)
77 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-38 5.5E-43 337.1 19.4 254 330-609 1-259 (321)
78 cd06650 PKc_MEK1 Catalytic dom 100.0 1.1E-37 2.4E-42 333.9 24.4 200 323-529 4-205 (333)
79 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-37 2.4E-42 332.5 24.3 247 330-609 2-261 (323)
80 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.2E-38 2E-42 326.3 23.1 267 326-602 6-282 (283)
81 PTZ00426 cAMP-dependent protei 100.0 3.1E-38 6.7E-43 339.0 20.0 254 322-611 28-291 (340)
82 KOG2052 Activin A type IB rece 100.0 3.5E-38 7.6E-43 324.9 19.2 275 312-603 199-505 (513)
83 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.7E-38 1.5E-42 327.3 21.8 264 324-602 4-284 (284)
84 cd05034 PTKc_Src_like Catalyti 100.0 4.2E-38 9E-43 324.4 19.7 257 321-600 3-260 (261)
85 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-37 5.2E-42 317.5 25.2 249 325-596 1-252 (256)
86 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.2E-37 6.9E-42 318.6 26.2 259 324-602 2-266 (267)
87 cd05054 PTKc_VEGFR Catalytic d 100.0 5.3E-38 1.2E-42 336.9 20.9 261 322-603 5-335 (337)
88 PTZ00267 NIMA-related protein 100.0 4.6E-38 9.9E-43 352.8 21.3 250 325-596 68-322 (478)
89 cd05601 STKc_CRIK Catalytic do 100.0 1.9E-37 4E-42 331.7 24.9 258 324-610 1-269 (330)
90 PHA03212 serine/threonine kina 100.0 9.8E-38 2.1E-42 341.1 23.1 268 323-609 91-381 (391)
91 cd05626 STKc_LATS2 Catalytic d 100.0 4E-37 8.8E-42 335.8 27.9 257 325-610 2-311 (381)
92 cd05035 PTKc_Axl_like Catalyti 100.0 9.4E-38 2E-42 323.6 21.7 254 326-601 1-272 (273)
93 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-37 3.4E-42 328.1 23.8 272 323-609 4-293 (303)
94 cd05090 PTKc_Ror1 Catalytic do 100.0 6.2E-38 1.3E-42 327.6 20.5 255 324-600 5-282 (283)
95 KOG1989 ARK protein kinase fam 100.0 1.9E-37 4.2E-42 345.6 25.2 266 320-608 33-319 (738)
96 cd05073 PTKc_Hck Catalytic dom 100.0 2.7E-37 5.9E-42 318.6 24.4 256 322-601 4-260 (260)
97 cd05607 STKc_GRK7 Catalytic do 100.0 6.2E-38 1.4E-42 326.9 19.8 256 332-610 1-260 (277)
98 cd05618 STKc_aPKC_iota Catalyt 100.0 2.4E-37 5.3E-42 330.8 24.6 261 330-610 1-268 (329)
99 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-37 2.6E-42 335.7 22.4 258 324-610 1-291 (350)
100 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.5E-38 1.2E-42 336.4 19.6 273 325-610 1-296 (338)
101 cd05085 PTKc_Fer Catalytic dom 100.0 1.5E-37 3.3E-42 318.2 21.8 247 330-599 1-249 (250)
102 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-37 3.2E-42 324.4 22.0 256 325-604 8-271 (279)
103 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-37 2.5E-42 320.3 20.9 251 323-601 5-256 (256)
104 cd05590 STKc_nPKC_eta Catalyti 100.0 4.7E-38 1E-42 335.0 18.4 255 330-611 1-260 (320)
105 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-37 2.8E-42 331.9 21.8 251 330-609 1-256 (323)
106 cd05089 PTKc_Tie1 Catalytic do 100.0 9.9E-38 2.2E-42 328.7 20.6 257 324-604 2-278 (297)
107 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-37 6E-42 330.8 24.3 261 324-610 1-272 (332)
108 cd05596 STKc_ROCK Catalytic do 100.0 2E-37 4.4E-42 336.7 23.5 260 321-609 40-309 (370)
109 KOG0588 Serine/threonine prote 100.0 6E-38 1.3E-42 336.5 18.9 252 325-610 13-269 (786)
110 cd08229 STKc_Nek7 Catalytic do 100.0 2.9E-37 6.3E-42 319.3 23.6 258 324-601 2-265 (267)
111 cd05605 STKc_GRK4_like Catalyt 100.0 1.8E-37 3.9E-42 324.8 22.3 261 325-608 1-265 (285)
112 KOG1025 Epidermal growth facto 100.0 3.3E-38 7.1E-43 343.6 16.8 251 328-602 700-958 (1177)
113 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-37 3.1E-42 321.9 21.0 256 323-601 4-267 (268)
114 cd05592 STKc_nPKC_theta_delta 100.0 1.8E-37 3.9E-42 329.9 22.2 238 330-593 1-243 (316)
115 cd05589 STKc_PKN Catalytic dom 100.0 6.8E-38 1.5E-42 334.3 18.9 255 326-609 1-262 (324)
116 cd05092 PTKc_TrkA Catalytic do 100.0 1E-37 2.2E-42 325.7 19.7 255 324-600 5-280 (280)
117 cd05582 STKc_RSK_N N-terminal 100.0 3.6E-38 7.7E-43 335.5 16.5 252 330-609 2-259 (318)
118 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-37 3.2E-42 328.4 21.1 256 324-603 7-282 (303)
119 PTZ00283 serine/threonine prot 100.0 6.7E-38 1.4E-42 352.0 19.5 258 317-596 25-296 (496)
120 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-37 3.2E-42 326.1 20.7 257 325-603 1-288 (290)
121 PLN00034 mitogen-activated pro 100.0 1.1E-37 2.3E-42 336.8 20.2 252 325-609 75-333 (353)
122 cd05084 PTKc_Fes Catalytic dom 100.0 1.6E-37 3.4E-42 318.6 20.4 248 330-600 1-252 (252)
123 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-37 2.6E-42 326.5 19.7 261 320-602 2-279 (288)
124 cd05043 PTK_Ryk Pseudokinase d 100.0 2.4E-37 5.3E-42 322.5 21.8 259 323-603 5-278 (280)
125 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-37 2.3E-42 330.0 19.5 260 323-604 17-302 (307)
126 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-37 3.9E-42 321.7 20.7 254 326-601 1-271 (272)
127 cd06637 STKc_TNIK Catalytic do 100.0 1.6E-37 3.4E-42 322.1 20.3 253 320-595 2-267 (272)
128 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-37 2.9E-42 332.0 20.3 257 325-609 1-262 (324)
129 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.2E-37 2.7E-42 324.4 19.5 256 322-599 4-276 (277)
130 KOG0589 Serine/threonine prote 100.0 2.3E-38 5.1E-43 335.0 14.1 252 324-598 4-259 (426)
131 KOG0611 Predicted serine/threo 100.0 4.4E-38 9.6E-43 319.0 15.3 246 323-596 52-302 (668)
132 cd05597 STKc_DMPK_like Catalyt 100.0 5.5E-37 1.2E-41 328.3 24.8 260 324-610 1-272 (331)
133 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-37 3.7E-42 339.5 21.1 263 319-602 32-400 (401)
134 cd05055 PTKc_PDGFR Catalytic d 100.0 2.9E-37 6.3E-42 326.1 22.1 260 321-601 32-301 (302)
135 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-37 6.5E-42 319.3 21.8 253 324-597 9-265 (267)
136 KOG0694 Serine/threonine prote 100.0 5.4E-38 1.2E-42 339.7 16.7 243 322-591 366-613 (694)
137 KOG0580 Serine/threonine prote 100.0 2.1E-38 4.6E-43 303.1 12.0 247 323-595 21-271 (281)
138 cd05624 STKc_MRCK_beta Catalyt 100.0 4.8E-37 1E-41 328.8 23.8 261 324-610 1-272 (331)
139 cd05616 STKc_cPKC_beta Catalyt 100.0 2.2E-37 4.7E-42 330.3 20.9 256 325-608 1-261 (323)
140 cd05628 STKc_NDR1 Catalytic do 100.0 5.2E-37 1.1E-41 332.8 24.2 260 324-611 1-300 (363)
141 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-37 4.6E-42 322.1 20.3 256 323-600 5-277 (277)
142 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-37 3.1E-42 331.0 19.4 252 330-609 1-257 (318)
143 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-37 5.2E-42 320.3 20.5 255 324-601 4-266 (267)
144 cd05115 PTKc_Zap-70 Catalytic 100.0 4.1E-37 9E-42 317.0 22.1 247 331-601 2-255 (257)
145 cd05621 STKc_ROCK2 Catalytic d 100.0 6.1E-37 1.3E-41 332.8 24.3 262 318-609 37-309 (370)
146 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-37 2.3E-42 325.7 17.8 254 325-600 6-282 (283)
147 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1E-36 2.2E-41 318.7 25.2 262 324-601 4-283 (284)
148 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.1E-37 4.5E-42 327.2 20.1 262 321-604 12-299 (304)
149 cd05599 STKc_NDR_like Catalyti 100.0 3.8E-37 8.2E-42 333.9 22.4 258 324-610 1-302 (364)
150 cd05116 PTKc_Syk Catalytic dom 100.0 2.6E-37 5.7E-42 318.2 20.1 246 331-601 2-255 (257)
151 cd05097 PTKc_DDR_like Catalyti 100.0 6.2E-37 1.3E-41 322.2 23.3 263 323-600 4-295 (295)
152 KOG0201 Serine/threonine prote 100.0 1.8E-38 3.8E-43 327.3 11.1 248 324-596 13-262 (467)
153 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-37 7.8E-42 316.5 20.8 250 325-597 1-252 (255)
154 cd05082 PTKc_Csk Catalytic dom 100.0 3.1E-37 6.8E-42 317.3 20.3 249 324-601 6-256 (256)
155 cd05619 STKc_nPKC_theta Cataly 100.0 5.1E-37 1.1E-41 326.4 22.2 237 330-592 1-242 (316)
156 cd05109 PTKc_HER2 Catalytic do 100.0 4.8E-37 1E-41 320.2 21.6 258 324-605 7-272 (279)
157 cd05047 PTKc_Tie Catalytic dom 100.0 4.2E-37 9.2E-42 319.1 21.0 249 330-602 1-269 (270)
158 cd06624 STKc_ASK Catalytic dom 100.0 6.5E-37 1.4E-41 317.1 22.3 257 318-596 2-264 (268)
159 cd05051 PTKc_DDR Catalytic dom 100.0 9.7E-37 2.1E-41 320.4 23.8 263 323-600 4-296 (296)
160 cd05608 STKc_GRK1 Catalytic do 100.0 5.5E-37 1.2E-41 320.3 21.7 256 332-609 1-262 (280)
161 cd05112 PTKc_Itk Catalytic dom 100.0 3.8E-37 8.1E-42 316.4 20.1 251 324-598 4-255 (256)
162 cd05040 PTKc_Ack_like Catalyti 100.0 5.2E-37 1.1E-41 315.5 21.1 248 330-599 1-256 (257)
163 KOG4257 Focal adhesion tyrosin 100.0 1.1E-37 2.3E-42 330.7 16.1 256 324-603 389-651 (974)
164 cd06619 PKc_MKK5 Catalytic dom 100.0 1.8E-36 3.9E-41 316.1 24.9 249 325-596 2-252 (279)
165 cd05065 PTKc_EphR_B Catalytic 100.0 4.7E-37 1E-41 318.4 20.3 254 325-601 5-268 (269)
166 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.3E-37 1.2E-41 325.8 21.2 261 322-604 10-296 (314)
167 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-36 2.3E-41 315.8 22.7 260 320-610 93-378 (576)
168 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-36 2.4E-41 314.0 23.0 250 324-596 2-259 (263)
169 cd05050 PTKc_Musk Catalytic do 100.0 2.8E-37 6.1E-42 323.5 18.6 256 323-600 4-288 (288)
170 cd05056 PTKc_FAK Catalytic dom 100.0 6.3E-37 1.4E-41 317.6 21.0 257 324-604 6-268 (270)
171 KOG2345 Serine/threonine prote 100.0 1.4E-37 3E-42 298.8 14.6 262 322-601 19-300 (302)
172 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-37 6.9E-42 335.6 19.4 262 325-595 1-286 (372)
173 cd08218 STKc_Nek1 Catalytic do 100.0 6.3E-37 1.4E-41 314.7 20.6 249 325-596 1-252 (256)
174 cd05598 STKc_LATS Catalytic do 100.0 1.1E-36 2.5E-41 331.6 23.7 257 324-609 1-306 (376)
175 cd05060 PTKc_Syk_like Catalyti 100.0 7.3E-37 1.6E-41 314.7 21.0 248 330-602 1-256 (257)
176 cd07863 STKc_CDK4 Catalytic do 100.0 7.8E-37 1.7E-41 319.8 21.4 262 325-595 1-283 (288)
177 cd05615 STKc_cPKC_alpha Cataly 100.0 3.7E-37 8E-42 328.5 19.3 258 325-610 1-263 (323)
178 cd05629 STKc_NDR_like_fungal C 100.0 1E-36 2.2E-41 332.2 23.1 257 324-609 1-310 (377)
179 cd05604 STKc_SGK3 Catalytic do 100.0 4.3E-37 9.3E-42 328.3 19.7 251 330-609 1-256 (325)
180 cd00192 PTKc Catalytic domain 100.0 7.7E-37 1.7E-41 313.9 20.9 248 330-599 1-262 (262)
181 cd05625 STKc_LATS1 Catalytic d 100.0 7.7E-37 1.7E-41 333.8 22.0 257 325-610 2-311 (382)
182 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.3E-37 9.4E-42 325.7 19.4 269 324-608 6-290 (309)
183 cd05620 STKc_nPKC_delta Cataly 100.0 5.9E-37 1.3E-41 325.9 20.5 248 330-609 1-253 (316)
184 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-36 3.4E-41 319.3 23.4 263 323-600 4-296 (296)
185 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-36 2.9E-41 321.9 22.9 263 324-596 1-286 (308)
186 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.4E-36 3E-41 315.0 22.5 252 330-599 1-268 (269)
187 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.7E-36 3.6E-41 316.2 23.0 263 324-602 4-284 (284)
188 cd05630 STKc_GRK6 Catalytic do 100.0 2.1E-36 4.5E-41 316.9 23.8 255 326-608 2-265 (285)
189 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-36 3.9E-41 329.2 24.1 257 316-595 35-302 (371)
190 cd06654 STKc_PAK1 Catalytic do 100.0 2E-36 4.2E-41 318.8 23.6 250 323-596 19-269 (296)
191 cd08221 STKc_Nek9 Catalytic do 100.0 1.1E-36 2.3E-41 313.0 21.1 250 325-597 1-253 (256)
192 cd07876 STKc_JNK2 Catalytic do 100.0 1.2E-36 2.6E-41 329.4 22.5 268 321-608 18-319 (359)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.5E-37 2.1E-41 326.8 21.3 264 319-604 7-296 (334)
194 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-36 2.5E-41 314.7 21.1 239 330-598 1-261 (262)
195 cd05632 STKc_GRK5 Catalytic do 100.0 9.5E-37 2.1E-41 319.3 20.6 260 326-608 2-265 (285)
196 cd05058 PTKc_Met_Ron Catalytic 100.0 1E-36 2.2E-41 314.2 20.1 250 330-602 1-260 (262)
197 cd05041 PTKc_Fes_like Catalyti 100.0 2E-36 4.4E-41 310.0 22.1 247 330-599 1-250 (251)
198 cd06643 STKc_SLK Catalytic dom 100.0 4.3E-36 9.4E-41 313.5 25.0 248 326-595 7-260 (282)
199 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-36 2.4E-41 327.6 21.1 260 323-603 6-341 (343)
200 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-36 4.2E-41 328.4 22.6 267 322-608 22-322 (364)
201 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-36 4.2E-41 310.7 21.3 249 324-596 3-252 (256)
202 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-36 2.5E-41 309.4 19.2 265 324-596 11-301 (323)
203 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.5E-37 2.1E-41 317.6 19.1 239 331-599 2-274 (274)
204 cd06644 STKc_STK10_LOK Catalyt 100.0 4.7E-36 1E-40 315.0 24.5 251 323-595 11-267 (292)
205 cd07874 STKc_JNK3 Catalytic do 100.0 1.2E-36 2.7E-41 328.8 20.2 268 321-608 14-315 (355)
206 cd08528 STKc_Nek10 Catalytic d 100.0 5E-36 1.1E-40 310.5 24.0 253 325-599 1-268 (269)
207 cd06656 STKc_PAK3 Catalytic do 100.0 3.6E-36 7.8E-41 316.9 23.1 250 323-596 18-268 (297)
208 cd05046 PTK_CCK4 Pseudokinase 100.0 4.7E-36 1E-40 311.8 23.6 255 324-599 5-274 (275)
209 cd05627 STKc_NDR2 Catalytic do 100.0 2.8E-36 6E-41 326.7 22.7 262 324-611 1-300 (360)
210 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-36 5.5E-41 314.8 21.3 257 324-604 7-271 (279)
211 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-36 3.6E-41 320.0 20.1 269 324-608 6-290 (301)
212 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-36 3.8E-41 316.5 20.0 263 325-595 1-280 (285)
213 cd05044 PTKc_c-ros Catalytic d 100.0 1.6E-36 3.5E-41 314.1 19.4 249 330-600 1-269 (269)
214 cd08223 STKc_Nek4 Catalytic do 100.0 2.9E-36 6.4E-41 309.7 21.3 249 325-596 1-253 (257)
215 cd06609 STKc_MST3_like Catalyt 100.0 6.2E-36 1.3E-40 310.8 23.8 248 324-596 1-250 (274)
216 cd05042 PTKc_Aatyk Catalytic d 100.0 6.4E-36 1.4E-40 309.9 23.8 252 330-599 1-268 (269)
217 cd06645 STKc_MAP4K3 Catalytic 100.0 2.4E-36 5.2E-41 312.5 20.2 252 324-596 9-264 (267)
218 PF00069 Pkinase: Protein kina 100.0 1.4E-36 3E-41 312.3 18.3 251 326-595 1-255 (260)
219 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-36 3.2E-41 324.2 19.0 250 330-608 1-255 (325)
220 cd06639 STKc_myosinIIIB Cataly 100.0 5.3E-36 1.2E-40 314.3 22.9 262 313-596 11-286 (291)
221 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.9E-36 8.5E-41 309.0 21.4 238 330-599 1-259 (259)
222 cd06613 STKc_MAP4K3_like Catal 100.0 5.8E-36 1.3E-40 308.2 22.6 254 323-596 2-259 (262)
223 cd06638 STKc_myosinIIIA Cataly 100.0 4.6E-36 1E-40 313.7 22.1 262 314-597 8-283 (286)
224 PTZ00284 protein kinase; Provi 100.0 1.4E-36 3E-41 340.4 19.3 278 316-610 121-444 (467)
225 cd06655 STKc_PAK2 Catalytic do 100.0 3.6E-36 7.9E-41 316.8 21.4 255 323-608 18-273 (296)
226 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-36 9.2E-41 313.4 21.4 259 314-595 6-277 (282)
227 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.8E-37 1.7E-41 315.0 15.5 240 330-599 1-258 (258)
228 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-35 2.3E-40 308.4 24.1 252 330-599 1-267 (268)
229 smart00219 TyrKc Tyrosine kina 100.0 7.9E-36 1.7E-40 306.1 22.9 251 326-598 1-258 (258)
230 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-36 3.7E-41 317.0 18.3 256 324-598 5-267 (284)
231 PHA03207 serine/threonine kina 100.0 4.4E-36 9.6E-41 328.8 22.4 263 323-596 91-374 (392)
232 KOG0663 Protein kinase PITSLRE 100.0 2.4E-36 5.2E-41 301.1 18.2 268 324-609 76-366 (419)
233 cd05083 PTKc_Chk Catalytic dom 100.0 2.4E-36 5.2E-41 310.3 18.8 247 324-600 6-253 (254)
234 PRK13184 pknD serine/threonine 100.0 4.3E-36 9.4E-41 347.1 22.9 260 324-603 2-292 (932)
235 KOG0032 Ca2+/calmodulin-depend 100.0 5.7E-36 1.2E-40 321.3 22.2 259 320-609 31-298 (382)
236 PHA03211 serine/threonine kina 100.0 6.2E-36 1.4E-40 331.5 23.1 263 322-595 167-453 (461)
237 cd06611 STKc_SLK_like Catalyti 100.0 7.5E-36 1.6E-40 311.2 22.3 251 323-595 4-260 (280)
238 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.9E-36 1.3E-40 312.5 21.3 263 324-595 1-281 (286)
239 KOG0660 Mitogen-activated prot 100.0 1E-36 2.2E-41 308.6 14.9 271 319-595 17-308 (359)
240 cd05586 STKc_Sck1_like Catalyt 100.0 2.8E-36 6.2E-41 322.6 19.0 249 332-608 1-257 (330)
241 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-35 3.3E-40 306.2 23.8 249 325-595 1-260 (265)
242 PTZ00036 glycogen synthase kin 100.0 2.3E-36 5.1E-41 335.3 18.8 268 322-609 64-356 (440)
243 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.6E-36 5.6E-41 314.3 18.0 246 325-596 5-252 (277)
244 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-35 2.4E-40 317.6 23.3 258 329-596 3-306 (327)
245 cd08220 STKc_Nek8 Catalytic do 100.0 7.5E-36 1.6E-40 306.3 20.9 248 325-596 1-252 (256)
246 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.6E-36 2.1E-40 311.4 22.1 250 325-595 2-260 (286)
247 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-35 2.7E-40 309.4 22.7 247 324-596 4-252 (277)
248 PHA03209 serine/threonine kina 100.0 1.3E-35 2.9E-40 321.0 23.6 191 323-526 65-256 (357)
249 cd06632 STKc_MEKK1_plant Catal 100.0 1E-35 2.2E-40 305.5 21.3 247 325-596 1-254 (258)
250 cd07868 STKc_CDK8 Catalytic do 100.0 6.1E-36 1.3E-40 317.9 20.3 195 329-529 6-219 (317)
251 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-35 2.9E-40 306.8 22.3 248 325-596 1-263 (267)
252 PTZ00266 NIMA-related protein 100.0 1.4E-35 2.9E-40 344.2 24.7 259 317-596 6-294 (1021)
253 cd05110 PTKc_HER4 Catalytic do 100.0 6E-36 1.3E-40 316.2 20.0 257 324-604 7-271 (303)
254 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.3E-35 7.2E-40 303.3 24.5 256 324-596 1-263 (267)
255 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.1E-36 1.8E-40 309.5 19.9 254 326-601 1-272 (273)
256 cd05574 STKc_phototropin_like 100.0 2.3E-35 4.9E-40 313.4 23.4 263 324-610 1-295 (316)
257 cd07860 STKc_CDK2_3 Catalytic 100.0 8.7E-36 1.9E-40 311.3 19.8 259 325-595 1-279 (284)
258 KOG0658 Glycogen synthase kina 100.0 1.9E-36 4.1E-41 307.2 14.1 261 322-595 22-304 (364)
259 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-35 2.7E-40 310.0 20.8 264 325-596 1-281 (286)
260 cd06626 STKc_MEKK4 Catalytic d 100.0 2.9E-35 6.3E-40 303.4 23.2 250 325-595 1-259 (264)
261 cd07833 STKc_CDKL Catalytic do 100.0 8.4E-36 1.8E-40 311.7 19.4 265 324-596 1-284 (288)
262 cd06651 STKc_MEKK3 Catalytic d 100.0 2.7E-35 5.8E-40 304.8 22.9 248 324-595 2-259 (266)
263 cd06608 STKc_myosinIII_like Ca 100.0 2E-35 4.4E-40 306.1 22.0 254 321-596 3-271 (275)
264 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-35 2.7E-40 315.3 20.7 195 329-529 6-219 (317)
265 cd07844 STKc_PCTAIRE_like Cata 100.0 2.9E-35 6.4E-40 308.5 22.9 262 324-595 5-286 (291)
266 cd07841 STKc_CDK7 Catalytic do 100.0 2.7E-35 5.9E-40 309.8 22.6 269 325-609 1-287 (298)
267 cd06623 PKc_MAPKK_plant_like C 100.0 1.9E-35 4.1E-40 304.6 21.0 251 324-596 1-255 (264)
268 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-35 3.7E-40 304.7 20.5 252 325-596 1-261 (265)
269 cd06605 PKc_MAPKK Catalytic do 100.0 8E-36 1.7E-40 307.9 18.0 252 325-595 2-255 (265)
270 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-35 2.4E-40 312.5 19.3 247 326-596 24-271 (292)
271 cd06659 STKc_PAK6 Catalytic do 100.0 2.3E-35 5E-40 310.9 21.4 245 328-596 25-270 (297)
272 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.4E-35 1.8E-39 304.8 25.5 259 324-596 1-265 (287)
273 cd06652 STKc_MEKK2 Catalytic d 100.0 4.9E-35 1.1E-39 302.6 23.3 249 324-596 2-260 (265)
274 KOG4279 Serine/threonine prote 100.0 1.2E-35 2.6E-40 317.8 19.2 244 331-596 582-831 (1226)
275 cd06629 STKc_MAPKKK_Bck1_like 100.0 5E-35 1.1E-39 303.5 23.2 253 325-596 2-268 (272)
276 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-35 2.5E-40 305.1 18.2 249 325-596 1-253 (257)
277 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.1E-36 1.3E-40 312.6 16.4 264 324-596 1-282 (286)
278 cd06630 STKc_MEKK1 Catalytic d 100.0 3.9E-35 8.3E-40 303.4 22.2 251 325-595 1-262 (268)
279 cd05609 STKc_MAST Catalytic do 100.0 4.4E-35 9.4E-40 309.8 22.8 255 324-600 1-273 (305)
280 cd06614 STKc_PAK Catalytic dom 100.0 3.9E-35 8.5E-40 306.9 22.2 254 320-596 15-269 (286)
281 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.5E-35 9.9E-40 307.2 22.1 266 322-595 3-286 (291)
282 cd07839 STKc_CDK5 Catalytic do 100.0 1.2E-35 2.6E-40 310.2 17.5 264 325-596 1-280 (284)
283 KOG0584 Serine/threonine prote 100.0 3.6E-36 7.8E-41 322.7 13.5 243 329-596 45-295 (632)
284 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-34 2.4E-39 303.7 24.3 247 325-595 20-267 (285)
285 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-35 2.4E-40 319.7 17.1 267 321-609 12-303 (343)
286 cd07835 STKc_CDK1_like Catalyt 100.0 2.3E-35 5.1E-40 307.9 18.9 262 326-595 1-278 (283)
287 KOG0667 Dual-specificity tyros 100.0 3.8E-35 8.2E-40 317.8 21.0 273 322-610 184-508 (586)
288 cd06647 STKc_PAK_I Catalytic d 100.0 5.1E-35 1.1E-39 307.6 21.2 249 323-595 18-267 (293)
289 cd05122 PKc_STE Catalytic doma 100.0 2.4E-34 5.2E-39 293.2 25.4 248 326-596 2-250 (253)
290 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-34 3E-39 301.8 23.9 251 324-596 1-260 (283)
291 KOG0199 ACK and related non-re 100.0 5E-36 1.1E-40 321.6 13.1 247 329-598 115-369 (1039)
292 cd06641 STKc_MST3 Catalytic do 100.0 9.6E-35 2.1E-39 302.6 22.5 246 325-596 5-252 (277)
293 KOG0610 Putative serine/threon 100.0 4.5E-35 9.8E-40 300.0 19.4 266 324-613 77-401 (459)
294 cd05578 STKc_Yank1 Catalytic d 100.0 7.4E-35 1.6E-39 299.8 21.1 253 325-606 1-257 (258)
295 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-34 2.9E-39 306.4 23.6 246 323-596 14-266 (307)
296 KOG0599 Phosphorylase kinase g 100.0 9.7E-36 2.1E-40 288.8 13.4 253 320-595 13-281 (411)
297 cd07837 STKc_CdkB_plant Cataly 100.0 6.9E-35 1.5E-39 306.2 21.1 264 324-595 1-289 (295)
298 KOG0577 Serine/threonine prote 100.0 8.7E-36 1.9E-40 314.4 13.9 244 325-596 27-277 (948)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 7.1E-35 1.5E-39 306.1 20.8 261 324-596 5-289 (293)
300 cd06917 STKc_NAK1_like Catalyt 100.0 9.3E-35 2E-39 302.3 21.4 247 325-596 2-254 (277)
301 cd05580 STKc_PKA Catalytic dom 100.0 2.4E-34 5.2E-39 301.8 24.6 254 324-608 1-258 (290)
302 cd07840 STKc_CDK9_like Catalyt 100.0 6E-35 1.3E-39 304.7 19.3 263 326-596 1-283 (287)
303 PLN00009 cyclin-dependent kina 100.0 8.1E-35 1.7E-39 305.8 20.3 264 324-596 2-283 (294)
304 cd06606 STKc_MAPKKK Catalytic 100.0 3.4E-34 7.4E-39 293.3 24.4 249 325-596 1-256 (260)
305 cd06616 PKc_MKK4 Catalytic dom 100.0 9.7E-35 2.1E-39 304.1 20.5 252 325-595 5-265 (288)
306 cd05572 STKc_cGK_PKG Catalytic 100.0 2.9E-34 6.2E-39 296.1 23.4 253 332-609 1-257 (262)
307 cd07864 STKc_CDK12 Catalytic d 100.0 1E-34 2.2E-39 305.9 20.5 269 320-596 3-298 (302)
308 KOG0033 Ca2+/calmodulin-depend 100.0 1.6E-36 3.5E-41 290.2 5.9 257 322-608 9-271 (355)
309 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-34 3.9E-39 301.2 21.9 263 325-595 1-279 (284)
310 KOG0574 STE20-like serine/thre 100.0 1.2E-36 2.7E-41 298.2 4.6 248 325-596 34-282 (502)
311 cd07831 STKc_MOK Catalytic dom 100.0 2.1E-34 4.6E-39 300.1 21.6 260 326-596 1-278 (282)
312 cd07852 STKc_MAPK15 Catalytic 100.0 6.1E-35 1.3E-39 313.2 17.8 268 322-596 5-294 (337)
313 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-34 3.9E-39 295.6 20.3 249 325-596 1-254 (258)
314 cd07849 STKc_ERK1_2_like Catal 100.0 6E-35 1.3E-39 313.1 17.2 272 322-610 3-298 (336)
315 cd05579 STKc_MAST_like Catalyt 100.0 2.7E-34 5.8E-39 295.7 20.9 250 332-608 1-261 (265)
316 cd05577 STKc_GRK Catalytic dom 100.0 2.1E-34 4.6E-39 300.0 20.4 253 332-608 1-258 (277)
317 cd07842 STKc_CDK8_like Catalyt 100.0 2.7E-34 5.7E-39 304.7 21.2 268 325-596 1-312 (316)
318 cd07865 STKc_CDK9 Catalytic do 100.0 2.7E-34 5.8E-39 303.6 21.1 263 324-595 12-305 (310)
319 cd05583 STKc_MSK_N N-terminal 100.0 2.6E-34 5.6E-39 301.0 20.7 256 325-601 1-267 (288)
320 cd06627 STKc_Cdc7_like Catalyt 100.0 4.5E-34 9.8E-39 292.4 21.8 246 325-595 1-249 (254)
321 cd07830 STKc_MAK_like Catalyti 100.0 2.8E-34 6E-39 299.6 20.5 265 326-596 1-279 (283)
322 cd07838 STKc_CDK4_6_like Catal 100.0 6.1E-34 1.3E-38 297.3 23.0 261 326-595 1-282 (287)
323 cd06635 STKc_TAO1 Catalytic do 100.0 6.8E-34 1.5E-38 302.5 23.6 249 325-601 26-281 (317)
324 cd08530 STKc_CNK2-like Catalyt 100.0 2E-34 4.3E-39 295.5 18.8 247 325-596 1-252 (256)
325 cd07850 STKc_JNK Catalytic dom 100.0 3.2E-34 6.8E-39 309.7 21.1 262 321-595 13-309 (353)
326 PHA03210 serine/threonine kina 100.0 1.7E-34 3.8E-39 325.2 19.4 270 320-596 144-453 (501)
327 PHA02882 putative serine/threo 100.0 5.4E-34 1.2E-38 300.0 21.8 257 323-599 11-294 (294)
328 cd07845 STKc_CDK10 Catalytic d 100.0 3E-34 6.4E-39 303.9 19.7 269 323-608 6-294 (309)
329 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-34 5.5E-39 299.5 18.8 262 326-596 1-279 (283)
330 cd08216 PK_STRAD Pseudokinase 100.0 9.6E-34 2.1E-38 300.5 23.0 256 329-595 7-293 (314)
331 KOG0596 Dual specificity; seri 100.0 1.3E-34 2.9E-39 305.0 16.1 250 324-595 361-625 (677)
332 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-34 4.3E-39 309.3 17.9 265 322-596 3-290 (337)
333 cd06657 STKc_PAK4 Catalytic do 100.0 4.2E-34 9.2E-39 300.5 19.7 244 329-596 25-269 (292)
334 cd05633 STKc_GRK3 Catalytic do 100.0 8.3E-34 1.8E-38 296.2 21.6 247 331-609 1-260 (279)
335 cd06618 PKc_MKK7 Catalytic dom 100.0 6.5E-34 1.4E-38 299.4 20.9 251 324-596 15-272 (296)
336 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-34 3E-39 310.1 16.0 273 323-608 4-298 (334)
337 PHA03390 pk1 serine/threonine- 100.0 2E-33 4.4E-38 291.4 24.1 247 318-595 8-260 (267)
338 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-33 2.6E-38 296.3 22.1 244 325-589 1-255 (290)
339 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-33 3.4E-38 291.3 22.7 249 324-596 2-260 (264)
340 KOG0200 Fibroblast/platelet-de 100.0 5.7E-34 1.2E-38 326.3 21.0 263 318-601 290-579 (609)
341 KOG0986 G protein-coupled rece 100.0 3.3E-35 7.1E-40 302.8 9.4 248 324-592 185-436 (591)
342 KOG0579 Ste20-like serine/thre 100.0 4.2E-35 9E-40 310.7 9.5 249 326-596 34-288 (1187)
343 cd05611 STKc_Rim15_like Cataly 100.0 3.2E-33 7E-38 288.0 22.5 249 330-608 2-255 (260)
344 cd06634 STKc_TAO2 Catalytic do 100.0 3.5E-33 7.5E-38 295.8 23.0 245 324-596 15-266 (308)
345 cd07866 STKc_BUR1 Catalytic do 100.0 7.2E-34 1.6E-38 300.5 17.7 265 323-595 7-306 (311)
346 cd08222 STKc_Nek11 Catalytic d 100.0 6.7E-34 1.5E-38 293.0 16.6 248 325-596 1-256 (260)
347 cd08226 PK_STRAD_beta Pseudoki 100.0 5E-33 1.1E-37 297.3 23.8 253 331-595 5-306 (328)
348 cd07834 STKc_MAPK Catalytic do 100.0 5.5E-34 1.2E-38 304.6 16.4 262 325-595 1-287 (330)
349 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-33 2.7E-38 294.2 18.4 261 326-595 1-277 (282)
350 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-33 2.4E-38 304.1 18.6 258 323-595 14-295 (342)
351 cd06633 STKc_TAO3 Catalytic do 100.0 9.9E-33 2.2E-37 293.0 25.1 242 326-595 23-271 (313)
352 PTZ00024 cyclin-dependent prot 100.0 1.9E-33 4.2E-38 301.3 19.0 269 324-608 8-317 (335)
353 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.2E-33 6.9E-38 298.8 20.4 267 318-595 4-286 (328)
354 cd05606 STKc_beta_ARK Catalyti 100.0 8.1E-33 1.8E-37 288.5 22.6 240 331-595 1-253 (278)
355 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-33 5.3E-38 301.9 19.2 266 315-595 8-298 (345)
356 cd05581 STKc_PDK1 Catalytic do 100.0 1.8E-33 3.8E-38 292.5 17.0 245 324-593 1-269 (280)
357 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.4E-33 5.2E-38 301.7 18.4 267 318-595 9-296 (343)
358 KOG0586 Serine/threonine prote 100.0 2.2E-33 4.7E-38 301.1 17.4 248 321-595 53-304 (596)
359 cd05123 STKc_AGC Catalytic dom 100.0 9.4E-33 2E-37 282.3 21.5 245 332-606 1-249 (250)
360 KOG4717 Serine/threonine prote 100.0 3.1E-33 6.8E-38 291.0 17.3 256 322-610 16-276 (864)
361 cd07857 STKc_MPK1 Catalytic do 100.0 4.2E-33 9.1E-38 298.3 19.0 262 325-595 1-290 (332)
362 KOG0983 Mitogen-activated prot 100.0 6.5E-34 1.4E-38 276.3 11.4 246 329-596 97-348 (391)
363 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.3E-33 5.1E-38 301.6 16.7 269 323-608 4-304 (342)
364 cd07851 STKc_p38 Catalytic dom 100.0 8.5E-34 1.8E-38 305.2 13.2 272 321-610 12-304 (343)
365 KOG1035 eIF-2alpha kinase GCN2 100.0 1.4E-33 3.1E-38 320.2 15.0 254 320-595 475-869 (1351)
366 KOG4250 TANK binding protein k 100.0 2.1E-33 4.5E-38 304.9 15.6 271 326-603 15-312 (732)
367 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-34 2.9E-39 329.8 6.3 253 320-595 1231-1492(1509)
368 KOG1024 Receptor-like protein 100.0 3.6E-33 7.9E-38 282.7 13.0 263 318-602 278-556 (563)
369 KOG0690 Serine/threonine prote 100.0 1.5E-33 3.2E-38 279.3 9.0 241 323-589 167-411 (516)
370 KOG0607 MAP kinase-interacting 100.0 1.3E-32 2.7E-37 272.5 15.3 268 315-608 74-365 (463)
371 PLN03224 probable serine/threo 100.0 9.6E-32 2.1E-36 298.0 23.6 266 322-608 143-504 (507)
372 KOG0612 Rho-associated, coiled 100.0 6.3E-33 1.4E-37 312.6 13.3 273 316-614 67-348 (1317)
373 cd05576 STKc_RPK118_like Catal 100.0 3.2E-32 7E-37 277.1 16.3 232 335-606 4-236 (237)
374 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-31 6.3E-36 308.3 25.0 145 324-473 4-152 (669)
375 KOG4236 Serine/threonine prote 100.0 1.5E-32 3.3E-37 286.5 12.5 243 329-595 569-817 (888)
376 KOG1151 Tousled-like protein k 100.0 1.9E-32 4.1E-37 280.7 12.2 255 321-595 460-739 (775)
377 KOG1006 Mitogen-activated prot 100.0 1.4E-33 3.1E-38 273.2 3.7 250 329-596 69-326 (361)
378 KOG0604 MAP kinase-activated p 100.0 3.2E-32 7E-37 267.8 11.7 260 322-610 59-328 (400)
379 smart00220 S_TKc Serine/Threon 100.0 6.7E-31 1.4E-35 265.8 21.6 238 336-596 1-240 (244)
380 PLN03225 Serine/threonine-prot 100.0 3.3E-31 7.1E-36 300.8 21.4 265 322-609 130-455 (566)
381 KOG0666 Cyclin C-dependent kin 100.0 4.3E-32 9.4E-37 267.9 10.1 202 324-529 24-243 (438)
382 KOG0603 Ribosomal protein S6 k 100.0 1.9E-31 4E-36 287.7 14.3 244 322-607 320-566 (612)
383 KOG0696 Serine/threonine prote 100.0 4.7E-32 1E-36 275.9 8.1 240 324-589 349-593 (683)
384 KOG0587 Traf2- and Nck-interac 100.0 1.5E-30 3.2E-35 287.6 20.6 262 313-596 8-281 (953)
385 KOG0671 LAMMER dual specificit 100.0 2.5E-31 5.4E-36 270.2 10.6 267 320-595 85-404 (415)
386 KOG0662 Cyclin-dependent kinas 100.0 2.9E-30 6.4E-35 236.5 12.5 265 325-595 3-281 (292)
387 KOG0614 cGMP-dependent protein 100.0 2.9E-31 6.4E-36 276.4 3.6 258 329-613 425-686 (732)
388 KOG0695 Serine/threonine prote 100.0 6.4E-30 1.4E-34 254.2 12.2 266 323-608 249-520 (593)
389 KOG0984 Mitogen-activated prot 100.0 7.1E-30 1.5E-34 239.3 9.6 202 324-530 46-256 (282)
390 KOG0669 Cyclin T-dependent kin 100.0 3.7E-31 8E-36 254.4 0.9 266 325-595 18-313 (376)
391 KOG0608 Warts/lats-like serine 100.0 3.6E-29 7.7E-34 266.3 15.4 207 322-533 627-878 (1034)
392 KOG1027 Serine/threonine prote 100.0 5.6E-30 1.2E-34 281.8 9.3 245 324-595 509-765 (903)
393 cd00180 PKc Catalytic domain o 100.0 3.7E-28 8.1E-33 239.3 21.2 210 332-597 1-214 (215)
394 smart00221 STYKc Protein kinas 100.0 2.1E-27 4.6E-32 237.9 18.6 199 326-528 1-202 (225)
395 KOG0664 Nemo-like MAPK-related 100.0 1.6E-29 3.5E-34 245.4 2.8 266 327-598 56-344 (449)
396 KOG1290 Serine/threonine prote 99.9 3.4E-27 7.3E-32 246.0 18.6 272 324-610 78-556 (590)
397 KOG0668 Casein kinase II, alph 99.9 1.4E-27 2.9E-32 227.0 10.4 258 323-595 37-320 (338)
398 KOG0665 Jun-N-terminal kinase 99.9 1.5E-27 3.2E-32 237.5 10.9 262 322-595 15-308 (369)
399 KOG1152 Signal transduction se 99.9 6.1E-28 1.3E-32 255.4 8.4 195 325-527 562-770 (772)
400 KOG1345 Serine/threonine kinas 99.9 4E-26 8.6E-31 222.1 11.6 255 323-600 23-287 (378)
401 KOG0576 Mitogen-activated prot 99.9 1.7E-26 3.8E-31 248.2 6.3 253 322-595 13-269 (829)
402 KOG0670 U4/U6-associated splic 99.9 3.7E-26 8.1E-31 239.1 8.3 274 314-595 422-744 (752)
403 PLN00181 protein SPA1-RELATED; 99.9 3.4E-26 7.4E-31 272.0 7.0 195 376-596 28-264 (793)
404 KOG1167 Serine/threonine prote 99.9 8.5E-25 1.8E-29 225.7 14.3 266 319-595 31-379 (418)
405 smart00750 KIND kinase non-cat 99.9 2.1E-24 4.5E-29 209.0 14.1 171 405-605 1-173 (176)
406 KOG1164 Casein kinase (serine/ 99.9 6.4E-23 1.4E-27 218.5 21.3 261 325-604 19-300 (322)
407 PRK09188 serine/threonine prot 99.9 1.6E-23 3.4E-28 223.4 16.4 171 316-501 10-195 (365)
408 KOG0195 Integrin-linked kinase 99.9 5.5E-24 1.2E-28 206.9 4.2 247 329-602 195-447 (448)
409 COG0515 SPS1 Serine/threonine 99.9 5.7E-21 1.2E-25 200.3 24.0 260 326-597 2-275 (384)
410 KOG1165 Casein kinase (serine/ 99.9 2.9E-21 6.2E-26 193.3 15.6 263 322-603 26-301 (449)
411 KOG1163 Casein kinase (serine/ 99.8 6.8E-21 1.5E-25 182.9 13.1 262 322-602 13-285 (341)
412 PRK10359 lipopolysaccharide co 99.8 1.2E-20 2.6E-25 187.6 11.8 172 322-521 29-217 (232)
413 cd05147 RIO1_euk RIO kinase fa 99.8 2.3E-20 5E-25 183.0 11.9 138 329-474 2-166 (190)
414 KOG0590 Checkpoint kinase and 99.8 3.1E-21 6.8E-26 218.8 6.2 260 327-610 321-591 (601)
415 cd05145 RIO1_like RIO kinase f 99.8 2.6E-19 5.6E-24 175.9 15.8 140 329-475 2-167 (190)
416 KOG1023 Natriuretic peptide re 99.8 8.1E-20 1.8E-24 198.3 13.2 219 374-604 1-227 (484)
417 KOG1240 Protein kinase contain 99.8 1.3E-20 2.8E-25 213.0 4.4 252 325-602 24-296 (1431)
418 PRK12274 serine/threonine prot 99.8 9.7E-19 2.1E-23 170.4 13.7 184 327-527 5-208 (218)
419 PRK10345 hypothetical protein; 99.8 2.7E-18 5.9E-23 170.1 15.2 137 326-472 4-156 (210)
420 PF14531 Kinase-like: Kinase-l 99.8 1.3E-18 2.9E-23 178.1 12.7 232 325-588 13-288 (288)
421 KOG0603 Ribosomal protein S6 k 99.7 5.5E-19 1.2E-23 191.6 4.7 231 332-598 2-241 (612)
422 KOG1166 Mitotic checkpoint ser 99.7 5E-18 1.1E-22 196.4 12.7 202 315-524 689-901 (974)
423 PRK14879 serine/threonine prot 99.7 2.9E-17 6.3E-22 164.0 14.9 134 330-474 2-143 (211)
424 PRK09605 bifunctional UGMP fam 99.7 4.6E-17 1E-21 185.2 14.4 139 321-474 330-476 (535)
425 smart00090 RIO RIO-like kinase 99.7 4.5E-17 9.7E-22 165.2 12.7 140 325-474 29-197 (237)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 8.6E-17 1.9E-21 159.0 13.6 130 331-474 1-138 (199)
427 cd05144 RIO2_C RIO kinase fami 99.7 1.1E-16 2.4E-21 158.3 13.9 142 318-474 9-174 (198)
428 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.8E-18 1.3E-22 180.5 4.1 174 394-594 330-509 (516)
429 KOG4158 BRPK/PTEN-induced prot 99.7 1.6E-16 3.5E-21 162.7 11.4 181 394-599 317-512 (598)
430 cd05120 APH_ChoK_like Aminogly 99.6 1.6E-15 3.5E-20 141.6 12.9 135 328-474 2-138 (155)
431 PF13947 GUB_WAK_bind: Wall-as 99.6 5.3E-16 1.2E-20 137.1 8.2 86 22-112 1-106 (106)
432 cd05119 RIO RIO kinase family, 99.6 3.6E-15 7.7E-20 145.9 11.9 136 329-474 2-163 (187)
433 KOG0606 Microtubule-associated 99.6 5.9E-16 1.3E-20 175.8 6.8 208 323-589 82-304 (1205)
434 PRK01723 3-deoxy-D-manno-octul 99.6 1.7E-14 3.7E-19 146.6 14.6 135 329-474 36-191 (239)
435 KOG0590 Checkpoint kinase and 99.5 1.8E-15 4E-20 171.9 0.6 262 323-609 19-291 (601)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 2.5E-13 5.4E-18 149.9 12.7 138 330-474 123-306 (437)
437 KOG1266 Protein kinase [Signal 99.4 2.3E-13 5E-18 136.9 7.1 203 371-596 118-330 (458)
438 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 3.1E-16 118.1 10.1 131 329-474 3-136 (170)
439 KOG0601 Cyclin-dependent kinas 99.3 4.3E-12 9.3E-17 138.5 5.9 246 325-595 115-377 (524)
440 PRK04750 ubiB putative ubiquin 99.2 2.7E-11 5.8E-16 135.5 11.6 144 324-475 120-314 (537)
441 KOG1243 Protein kinase [Genera 99.2 3.9E-10 8.4E-15 124.3 17.4 166 345-522 34-199 (690)
442 cd05154 ACAD10_11_like Acyl-Co 99.2 1.9E-10 4E-15 115.3 12.6 143 329-474 3-206 (223)
443 KOG0601 Cyclin-dependent kinas 99.2 2.8E-11 6E-16 132.2 6.3 258 313-602 253-519 (524)
444 cd05146 RIO3_euk RIO kinase fa 99.1 6.5E-10 1.4E-14 108.5 13.9 134 330-474 3-173 (197)
445 COG3642 Mn2+-dependent serine/ 99.1 1.3E-09 2.8E-14 103.0 12.2 130 331-474 3-140 (204)
446 KOG3087 Serine/threonine prote 99.1 2.6E-09 5.7E-14 100.4 13.2 143 328-474 11-165 (229)
447 KOG3741 Poly(A) ribonuclease s 98.9 2.3E-08 4.9E-13 107.3 16.4 168 337-525 289-475 (655)
448 PRK15123 lipopolysaccharide co 98.9 4.1E-08 8.8E-13 101.2 16.3 133 338-474 36-194 (268)
449 KOG0606 Microtubule-associated 98.9 3.8E-10 8.3E-15 129.3 0.9 249 322-592 802-1084(1205)
450 PF01163 RIO1: RIO1 family; I 98.9 1.5E-08 3.3E-13 98.6 11.5 124 339-474 1-155 (188)
451 COG4248 Uncharacterized protei 98.8 1.1E-07 2.4E-12 99.6 16.1 266 328-605 15-304 (637)
452 PF08488 WAK: Wall-associated 98.6 5.4E-08 1.2E-12 84.6 5.9 64 131-198 2-76 (103)
453 KOG2137 Protein kinase [Signal 98.6 3.4E-08 7.4E-13 109.7 3.9 149 429-595 106-263 (700)
454 PF06293 Kdo: Lipopolysacchari 98.6 6.8E-07 1.5E-11 88.9 12.9 106 364-474 55-170 (206)
455 COG0478 RIO-like serine/threon 98.5 5.3E-07 1.1E-11 90.4 10.9 134 326-473 93-250 (304)
456 PRK09902 hypothetical protein; 98.5 1.3E-06 2.7E-11 85.8 12.8 139 332-474 26-179 (216)
457 COG0661 AarF Predicted unusual 98.5 9.5E-07 2.1E-11 98.6 12.1 157 310-474 100-314 (517)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 6.4E-06 1.4E-10 83.1 14.0 139 330-474 7-182 (226)
459 cd05150 APH Aminoglycoside 3'- 98.2 1.8E-05 4E-10 80.7 13.0 140 331-474 5-193 (244)
460 PF06176 WaaY: Lipopolysacchar 98.2 1.3E-05 2.9E-10 78.9 11.3 138 322-474 29-183 (229)
461 PF01636 APH: Phosphotransfera 98.2 1.4E-05 3.1E-10 80.3 11.9 143 329-474 2-197 (239)
462 KOG1235 Predicted unusual prot 98.1 1.6E-05 3.5E-10 88.5 12.2 159 310-475 136-355 (538)
463 COG1718 RIO1 Serine/threonine 98.1 2E-05 4.4E-10 78.5 11.4 151 314-474 35-215 (268)
464 KOG0576 Mitogen-activated prot 98.1 7.4E-07 1.6E-11 98.1 -0.5 192 319-526 237-430 (829)
465 PF12260 PIP49_C: Protein-kina 98.0 2.1E-05 4.5E-10 76.9 9.1 103 368-474 7-111 (188)
466 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00012 2.6E-09 72.0 14.0 129 328-468 5-165 (199)
467 PLN02876 acyl-CoA dehydrogenas 98.0 6.5E-05 1.4E-09 90.2 14.5 147 329-475 43-258 (822)
468 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00017 3.8E-09 73.1 12.0 139 330-474 3-194 (235)
469 PRK10593 hypothetical protein; 97.8 0.00039 8.4E-09 73.2 14.9 77 328-407 18-100 (297)
470 cd05157 ETNK_euk Ethanolamine 97.7 0.00044 9.6E-09 70.0 12.5 141 329-474 3-201 (235)
471 PF13095 FTA2: Kinetochore Sim 97.6 0.0007 1.5E-08 66.2 12.3 125 324-472 37-206 (207)
472 cd05153 HomoserineK_II Homoser 97.6 0.00031 6.6E-09 73.9 10.1 142 329-474 19-205 (296)
473 PRK09550 mtnK methylthioribose 97.6 0.0012 2.7E-08 71.8 14.6 76 329-406 31-117 (401)
474 TIGR02721 ycfN_thiK thiamine k 97.6 0.00036 7.7E-09 71.8 9.9 137 332-474 4-175 (256)
475 COG2112 Predicted Ser/Thr prot 97.5 0.00072 1.6E-08 64.1 10.4 129 328-474 26-155 (201)
476 PRK05231 homoserine kinase; Pr 97.5 0.0028 6E-08 67.4 15.8 141 330-474 28-217 (319)
477 cd05156 ChoK_euk Choline Kinas 97.3 0.0014 3.1E-08 69.0 11.0 140 330-474 4-213 (302)
478 TIGR00938 thrB_alt homoserine 97.2 0.007 1.5E-07 64.1 14.5 143 329-474 27-217 (307)
479 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0014 3E-08 77.6 9.1 195 367-597 229-434 (1351)
480 COG3173 Predicted aminoglycosi 96.9 0.0097 2.1E-07 62.7 11.6 127 348-475 48-229 (321)
481 cd05152 MPH2' Macrolide 2'-Pho 96.8 0.01 2.2E-07 61.8 11.2 31 444-474 185-216 (276)
482 PLN02236 choline kinase 96.7 0.015 3.3E-07 62.6 11.9 140 330-474 42-231 (344)
483 KOG2268 Serine/threonine prote 96.6 0.003 6.5E-08 65.3 5.7 144 314-472 79-249 (465)
484 PF12947 EGF_3: EGF domain; I 96.5 0.00098 2.1E-08 46.0 0.8 29 201-235 7-35 (36)
485 PF12662 cEGF: Complement Clr- 96.4 0.0033 7.1E-08 38.9 2.4 24 220-245 1-24 (24)
486 TIGR02906 spore_CotS spore coa 96.1 0.093 2E-06 55.4 14.1 31 443-474 186-216 (313)
487 PLN02756 S-methyl-5-thioribose 96.1 0.084 1.8E-06 57.5 13.5 73 329-404 37-119 (418)
488 TIGR01767 MTRK 5-methylthiorib 96.1 0.062 1.3E-06 57.5 12.3 73 331-405 2-85 (370)
489 PF03881 Fructosamin_kin: Fruc 96.1 0.023 5E-07 59.4 9.0 74 328-405 21-97 (288)
490 KOG1826 Ras GTPase activating 95.9 0.0014 3E-08 79.2 -1.2 175 351-526 1255-1440(2724)
491 KOG2270 Serine/threonine prote 95.8 0.067 1.5E-06 56.6 10.6 136 330-473 150-312 (520)
492 TIGR02904 spore_ysxE spore coa 95.6 0.13 2.9E-06 54.3 12.5 32 443-474 195-226 (309)
493 COG2334 Putative homoserine ki 95.6 0.08 1.7E-06 56.3 10.5 139 332-474 34-228 (331)
494 PLN02421 phosphotransferase, a 95.5 0.11 2.3E-06 55.6 11.1 140 330-474 20-213 (330)
495 PRK06148 hypothetical protein; 95.4 0.13 2.8E-06 63.3 12.9 141 330-474 31-236 (1013)
496 PRK11768 serine/threonine prot 95.0 0.51 1.1E-05 50.3 14.4 71 335-406 36-113 (325)
497 PF01633 Choline_kinase: Choli 95.0 0.054 1.2E-06 53.8 6.5 122 348-474 2-174 (211)
498 PF07387 Seadorna_VP7: Seadorn 94.9 0.13 2.8E-06 50.8 8.5 152 335-523 73-225 (308)
499 KOG1093 Predicted protein kina 94.6 0.053 1.1E-06 59.6 5.6 51 363-414 25-76 (725)
500 COG3001 Uncharacterized protei 94.3 0.27 5.9E-06 48.9 9.3 74 331-408 23-99 (286)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-60 Score=505.05 Aligned_cols=293 Identities=45% Similarity=0.766 Sum_probs=260.9
Q ss_pred CCCCCChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEE
Q 005536 310 SVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCC 389 (692)
Q Consensus 310 ~~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~ 389 (692)
..+.|+++|++++|++|+..++||+|+||+||+|.+.+++.||||++........++|.+|++++++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 57789999999999999999999999999999999999999999988765433156699999999999999999999999
Q ss_pred EeCC-eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEee
Q 005536 390 IEEG-EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVAD 468 (692)
Q Consensus 390 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~D 468 (692)
.+.+ +++||||||++|+|.++|+......|+|.+|++||.++|+||+|||+.+.++|||||||++|||||+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9999 599999999999999999986543799999999999999999999999888999999999999999999999999
Q ss_pred ecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 469 FGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 469 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
||+|+.......+..+...||.+|+||||+..+.++.|+|||||||+|+||+||+++.+...+..+..+..|+...+.++
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence 99998755412222222289999999999999999999999999999999999999999877777778999999999999
Q ss_pred cccccccccCCcCCCccCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 549 CVDEIIDPYLEPHRDAWTL-SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~-~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+.+++|+.+.. ..... +.+.++.+++.+|++.+|.+||+|.||+++|+.+...
T Consensus 301 ~~~eiiD~~l~~--~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 301 KLREIVDPRLKE--GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred chhheeCCCccC--CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 999999999863 22222 6788899999999999999999999999999776543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-48 Score=408.71 Aligned_cols=258 Identities=35% Similarity=0.530 Sum_probs=214.1
Q ss_pred ccceeecccccEEEEEEEEeCCCEEEEEEeecCCch--hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-eeEEEEEeCC
Q 005536 327 SEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-EPILVYEFMP 403 (692)
Q Consensus 327 ~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-~~~lV~E~~~ 403 (692)
...+.||+|+||+||+|.+.....||||++...+.. ..++|.+|+.+|++++|||||+++|+|.+.. ...|||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 345569999999999999976666999999865422 2569999999999999999999999999987 7999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCceEEcCCC-ceEEeeecCCccCCCCCCc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPP-IYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~-iiHrDik~~NILld~~~-~~kl~DFGla~~~~~~~~~ 481 (692)
+|+|.++|+......+++..+++||.|||+||.|||+. + ||||||||+||||+.++ ++||+|||+++...... .
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~ 199 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-T 199 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-c
Confidence 99999999986556799999999999999999999995 5 99999999999999997 99999999998633211 3
Q ss_pred ccccCCCCCCCCCccccc--cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 482 ISTAPQGTPGYLDPQYHQ--YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~--~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
..+...||+.|||||++. ...|+.|+|||||||+||||+||+.||....+ .+.+......+...++
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~~Rp~~------ 267 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGGLRPPI------ 267 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcCCCCCC------
Confidence 344578999999999999 56999999999999999999999999974432 2222222223222222
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
+..+...+..|+.+||+.||.+||++.|++..|+.+..+.-
T Consensus 268 ------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 268 ------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred ------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 12245678899999999999999999999999999987543
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-46 Score=397.93 Aligned_cols=256 Identities=29% Similarity=0.432 Sum_probs=220.4
Q ss_pred CccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+...+.||+|.||.||.|.+.....||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|..++..+||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3446789999999999999988889999999865 455678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
+|.++|+...+..+...+.+.++.|||+|++||++ +++|||||.++||||+++..+||+||||||...++.......
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 99999998666779999999999999999999999 499999999999999999999999999999654555545555
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
..-...|.|||.+..+.++.|||||||||+||||+| |+.|+.... ...+.+.+.+|. +-.
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-------n~ev~~~le~Gy------------Rlp 424 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-------NEEVLELLERGY------------RLP 424 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-------HHHHHHHHhccC------------cCC
Confidence 566789999999999999999999999999999999 666654221 123455555542 223
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+..++.++.+|+..||..+|++|||++.+...|+++...
T Consensus 425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 3456778999999999999999999999999999988653
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=365.49 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=209.8
Q ss_pred CChHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe
Q 005536 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391 (692)
Q Consensus 314 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~ 391 (692)
.+..++++ .+.||+|..|+|||+++. +++.+|+|.+... +....++..+|++++++.+||+||+++|.|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 44556655 568999999999999975 4788999999544 45567889999999999999999999999999
Q ss_pred CC-eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 392 EG-EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 392 ~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
.. ...|+||||.+|+|.+.+... +.+++...-+||.++++||.|||+. .+||||||||+|||++..|++||+|||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecccc
Confidence 98 599999999999999998765 4599999999999999999999974 599999999999999999999999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
.++..... ......||..|||||.+++..|+.++||||||+.|+|+.+|+.|+....+.. .. ....+..|-.+..
T Consensus 225 VS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-~~-~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 225 VSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-LD-IFELLCAIVDEPP 299 (364)
T ss_pred ccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC-CC-HHHHHHHHhcCCC
Confidence 99864322 4456789999999999999999999999999999999999999987541111 11 1122333333322
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..+.+. ....++..++..||+.||.+||+++|++
T Consensus 300 P~lP~~-----------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 300 PRLPEG-----------EFSPEFRSFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred CCCCcc-----------cCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 222111 2456899999999999999999988887
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-44 Score=380.29 Aligned_cols=246 Identities=23% Similarity=0.347 Sum_probs=211.1
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
..|...+.||+|||+++|.++. ..|+.||+|++.+. .....+...+||+|.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999996 78999999999764 3456778899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
|+|++++|..++++ ...+++.++..+..||+.||.|||+. +|||||||..|+||+++.++||+|||||.....+
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD- 171 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc-
Confidence 99999999998873 46799999999999999999999995 9999999999999999999999999999875433
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.+......|||.|+|||++....++..+||||+||++|.||.|++||+... ......+++.....
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-------vkety~~Ik~~~Y~-------- 236 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-------VKETYNKIKLNEYS-------- 236 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-------HHHHHHHHHhcCcc--------
Confidence 234456789999999999999999999999999999999999999997432 23334555432111
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.....+..+||.++|+.+|.+|||+++|+
T Consensus 237 -----~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 237 -----MPSHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred -----cccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 1112335678999999999999999988887
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=369.00 Aligned_cols=202 Identities=29% Similarity=0.512 Sum_probs=180.8
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
..+|...++||+|+||+||+|++.. +..||||.+... .....+.+..|+++|+.++|||||.|++++...+..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 3568888889999999999999654 789999999766 5566778899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC------CceEEeeecCCc
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN------YRSKVADFGLSR 473 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~------~~~kl~DFGla~ 473 (692)
|||.+|+|.+||+..+ .+++.....++.|+|.||++||+ ++||||||||+||||+.. -.+||+|||+||
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999999763 59999999999999999999999 599999999999999765 468999999999
Q ss_pred cCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCC
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRP 531 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~ 531 (692)
... .........|++-|||||+++..+|+.|+|+||+|++|||+++|+.||+...+
T Consensus 164 ~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 164 FLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 754 33344567899999999999999999999999999999999999999985443
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-44 Score=367.19 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=213.1
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCc-------hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDT-------DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG 393 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~-------~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~ 393 (692)
..+.|...+.||+|+||.|-+|. ..+++.||||+++.+.. .......+|++||++|+|||||++.+++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45678888999999999999998 45689999999986521 12334579999999999999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CceEEeeec
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN---YRSKVADFG 470 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~---~~~kl~DFG 470 (692)
..|+||||++||.|.+.+..+. .+.+..-..++.|++.|+.|||+ +||+||||||+||||..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999998764 37777778899999999999999 599999999999999765 789999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCccccccCC---CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQYFH---LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
+|+... ....+....||+.|.|||++.+.. +..|.|+||+||+||-+++|.+||...... ....+++.+
T Consensus 325 lAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~------~sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD------PSLKEQILK 396 (475)
T ss_pred hhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC------ccHHHHHhc
Confidence 999743 344556778999999999987653 234789999999999999999999643221 123556666
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccccc
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIY 611 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~~ 611 (692)
|+.... .....+..++..+|+.+||..||++|||+.|++ .++|.....
T Consensus 397 G~y~f~---------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL-------~hpW~~~~~ 444 (475)
T KOG0615|consen 397 GRYAFG---------PLQWDRISEEALDLINWMLVVDPENRPSADEAL-------NHPWFKDAP 444 (475)
T ss_pred Cccccc---------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHh-------cChhhhccc
Confidence 655322 111235667899999999999999999999988 788876443
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-44 Score=396.33 Aligned_cols=261 Identities=28% Similarity=0.413 Sum_probs=221.6
Q ss_pred hhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE 394 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~ 394 (692)
.+.+....+.||+|+||+||+|+..+ .+.||||.++..... ..++|++|++++..++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 34455667789999999999998543 457999999987655 78899999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcc--------CCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 395 PILVYEFMPNGTLCQHLQRER--------GSG----LPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~--------~~~----l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
.++|+|||..|+|.++|.... +.+ |+..+.+.||.|||.|+.||-++ .++||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 999999999999999998532 123 88899999999999999999995 999999999999999999
Q ss_pred ceEEeeecCCccCCCCCCcc-cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHH
Q 005536 463 RSKVADFGLSRLGMTESSHI-STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 463 ~~kl~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~ 540 (692)
.|||+||||+|.....+.+. .....-..+||+||.+..+++|.+||||||||+|||+++ |+.|+..... +.
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------~E 713 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------QE 713 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------HH
Confidence 99999999999755544443 334556789999999999999999999999999999998 8888763321 34
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+++.+++|.+.+ .+..++.++.+|+..||+.+|.+||+++||-..|+.....
T Consensus 714 VIe~i~~g~lL~------------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 714 VIECIRAGQLLS------------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred HHHHHHcCCccc------------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 567777765532 3446778999999999999999999999999999987654
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-44 Score=352.07 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=209.4
Q ss_pred cCccceeecccccEEEEEEE-EeCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEE-EEEeCC-eeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLG-CCIEEG-EPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g-~~~~~~-~~~lV~ 399 (692)
.|.+.++||.|.||+|||+. +.+|..||.|.++.. +....+....|+.+|++|+|||||++++ .+.++. .++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46678899999999999998 678999999999855 4456678899999999999999999999 444444 489999
Q ss_pred EeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 400 EFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNP-PIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~-~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
||+..|+|.+.++..+ .+.+++..++++..|++.||.++|+...+ -|+||||||.||+|+.+|.+||+||||+++..
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999997543 35599999999999999999999994322 38999999999999999999999999999854
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
... ......+|||.||+||.+...+|+.||||||+|+++|||..-+.||... ++. ...++|.+|....+.|
T Consensus 180 s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~-~L~~KI~qgd~~~~p~- 250 (375)
T KOG0591|consen 180 SKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLL-SLCKKIEQGDYPPLPD- 250 (375)
T ss_pred chh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHH-HHHHHHHcCCCCCCcH-
Confidence 433 3335568999999999999999999999999999999999999999754 222 2355676664443322
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
.-...++.+|+..|+..||+.||+...+++.+
T Consensus 251 ----------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 251 ----------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred ----------HHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 23456789999999999999999854444433
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=357.62 Aligned_cols=261 Identities=24% Similarity=0.334 Sum_probs=214.4
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.+.|+..+.||+|+||+||.++..+ ++.+|+|.+++. ...+.+...+|..||.+++||.||+++..|.+.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4679999999999999999998554 789999999865 234567889999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+||+.||.|..+|+++ ..+++..+.-.+.+|+.||.|||+ .+||||||||+|||||++|+++|+||||++....+
T Consensus 104 ld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 9999999999999876 458999888999999999999999 49999999999999999999999999999964333
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
........||+.|||||++.+..|+..+|.||+|+++|||++|.+||..... ....+.+.+++....
T Consensus 179 -~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-------~~~~~~I~~~k~~~~----- 245 (357)
T KOG0598|consen 179 -GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-------KKMYDKILKGKLPLP----- 245 (357)
T ss_pred -CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-------HHHHHHHhcCcCCCC-----
Confidence 2334457899999999999999999999999999999999999999974432 233455555442111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccccc
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIY 611 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~~ 611 (692)
+.-...+..+|+.+.|+.+|++|.- ...-.+.|+.+++...+-
T Consensus 246 -------p~~ls~~ardll~~LL~rdp~~RLg---~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 246 -------PGYLSEEARDLLKKLLKRDPRQRLG---GPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred -------CccCCHHHHHHHHHHhccCHHHhcC---CCCChHHhhcCcccccCC
Confidence 0112246789999999999999964 112234477777665443
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=374.24 Aligned_cols=267 Identities=28% Similarity=0.487 Sum_probs=218.2
Q ss_pred ChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC
Q 005536 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE 392 (692)
Q Consensus 315 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~ 392 (692)
+.++++...+.+....+||+|.||+||+|+++.+ ||||+++... .+..+.|.+|+.++++.+|.||+-++|+|...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd--VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD--VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccccc--eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 3466666666777788999999999999998754 9999998763 45788999999999999999999999999988
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
.. .||+.++++-+|+.|||-.+ ..++..+.++||.|||+|+.|||. ++|||||||+.||+|++++.|||+||||+
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccce
Confidence 87 99999999999999999764 569999999999999999999999 59999999999999999999999999998
Q ss_pred ccCCC-CCCcccccCCCCCCCCCcccccc---CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 473 RLGMT-ESSHISTAPQGTPGYLDPQYHQY---FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 473 ~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
..... ..........|...|||||+++. .+|+..|||||||+|+|||+||..|+.....+. .+-++++|
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq-------IifmVGrG 608 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ-------IIFMVGRG 608 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh-------eEEEeccc
Confidence 65222 22233345568899999998753 479999999999999999999999987333222 22234444
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
.+.. |.. .....+.++|.+|+..||..++++||.+.+|+..|+.+..
T Consensus 609 ~l~p--d~s------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YLMP--DLS------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCc--cch------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 2211 111 1112456789999999999999999999999998888765
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=377.55 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=216.0
Q ss_pred CccceeecccccEEEEEEEEeC----CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
..+.+.||.|.||.||+|+++- ...||||.++..- +....+|+.|..||.+++||||++|.|+.......+||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3456789999999999999754 3479999999764 4566789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
||+||+|+.+|+.+.+ .+++.+..-+..+||.|++||.++ ++|||||.++|||++.+..+||+||||+|...++..
T Consensus 711 yMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 9999999999998764 499999999999999999999996 999999999999999999999999999997555442
Q ss_pred cccccCCC--CCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 481 HISTAPQG--TPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 481 ~~~~~~~g--t~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
...+...| ..+|.|||.+...++|.+||||||||++||.++ |.+|+-.... +.+++.+++|
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-------QdVIkaIe~g--------- 850 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-------QDVIKAIEQG--------- 850 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-------HHHHHHHHhc---------
Confidence 33333333 569999999999999999999999999999998 8777632211 2234445443
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+-+.+++++..+.+|++.||++|..+||++.+|+..|+++-..
T Consensus 851 ---yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 851 ---YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred ---cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 22344678889999999999999999999999999999996543
No 13
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=388.85 Aligned_cols=261 Identities=26% Similarity=0.430 Sum_probs=215.3
Q ss_pred ccCccceeecccccEEEEEEEEeC--CC----EEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN--DD----WVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
.+.+..+.||+|.||.||.|...+ +. .||||.++.. +.+...+|.+|..+|+.++|||||+++|+|.+...++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 344557789999999999999765 32 4999999865 4667889999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 397 LVYEFMPNGTLCQHLQRERG-----SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
|++|||++|+|..||++.+. ..|+....+.++.|||+|+.|||+ +++|||||.++|+||++...+||+||||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999998642 458999999999999999999999 5999999999999999999999999999
Q ss_pred CccCCCCCCcccccC-CCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 472 SRLGMTESSHISTAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 472 a~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
||.+........... .-..+|||||.++.+.++.|||||||||+||||+| |..|+..... .+......+.|+
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n------~~v~~~~~~ggR 922 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN------FEVLLDVLEGGR 922 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch------HHHHHHHHhCCc
Confidence 995444333332222 34569999999999999999999999999999999 6666653322 222222333332
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
+ +.+..+++.+.+|+..||+.+|++||++..++++++.|.....
T Consensus 923 L-------------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 923 L-------------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred c-------------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 2 2234567789999999999999999999999999999876544
No 14
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5e-41 Score=360.45 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=206.7
Q ss_pred hhccCccceeecccccEEEEEEEE------eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC-
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL------HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE- 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~- 392 (692)
..++|...++||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346788899999999999999974 224679999997543 33456799999999999 899999999998765
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcc---------------------------------------------------------
Q 005536 393 GEPILVYEFMPNGTLCQHLQRER--------------------------------------------------------- 415 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 415 (692)
+..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 45789999999999999997532
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc-ccccCCCCCC
Q 005536 416 ---GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPG 491 (692)
Q Consensus 416 ---~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~ 491 (692)
...+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++........ ......++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 1247888999999999999999999 59999999999999999999999999999864322221 1223456789
Q ss_pred CCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHH
Q 005536 492 YLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSI 570 (692)
Q Consensus 492 Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~ 570 (692)
|+|||++.+..++.++||||||++||||++ |..||....... .....+..+..... +....
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~~~~~~------------~~~~~ 303 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQRLKDGTRMRA------------PENAT 303 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHHHhcCCCCCC------------CCCCC
Confidence 999999998899999999999999999997 999986433211 12233333221111 11223
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 571 HNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 571 ~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
..+.+|+.+||+.+|++|||+.||+++|+.+..
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 568899999999999999999999999998754
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=348.27 Aligned_cols=252 Identities=29% Similarity=0.430 Sum_probs=203.6
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC--eeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG--EPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~--~~~lV~E 400 (692)
.++...+.||+|+||+||++...+ |+..|||.+...+....+.+.+|+.+|++++|||||+.+|.....+ .+.+.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 456667899999999999999765 8899999998764444777999999999999999999999855444 6899999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCCccCCC--
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRLGMT-- 477 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~~~~-- 477 (692)
|+++|+|.+++.+..+ .|++..+.+.+.||++||+|||+ ++|+|+||||+||||+. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998866 79999999999999999999998 59999999999999999 79999999999986432
Q ss_pred CCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.........+||+.|||||++..+ ....++|||||||+++||+||+.||... .....+......++...+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~---- 243 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPE---- 243 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCC----
Confidence 222334457899999999999854 3345999999999999999999998632 111222222222221221
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+.....+..+++.+|++.+|++|||+.|+++
T Consensus 244 --------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 244 --------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred --------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 12234467889999999999999999999984
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=353.43 Aligned_cols=267 Identities=24% Similarity=0.333 Sum_probs=210.9
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHH--HHHHHHHHhCC-CCCeeeeEEEEEeCC-eeE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQV--MNEIKLLSSVS-HPNLLRLLGCCIEEG-EPI 396 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~--~~E~~il~~l~-H~niv~l~g~~~~~~-~~~ 396 (692)
..++|...++||.|.||.||+|+ ...+..||||+++..-.. .++. ++|++.|++|+ ||||++|.+++.+.+ .++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 45678889999999999999998 456889999999866333 3333 58999999999 999999999999988 999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||| ..+|+++++.. ++.+++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+||..
T Consensus 87 fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev- 160 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV- 160 (538)
T ss_pred eeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc-
Confidence 999999 57999999876 67899999999999999999999995 9999999999999999999999999999963
Q ss_pred CCCCcccccCCCCCCCCCcccc-ccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc---
Q 005536 477 TESSHISTAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE--- 552 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e--- 552 (692)
......+..+.|..|.|||++ +.+-|+.+.|+||+|+|++||.+-++.|......+++...-.++..-.+....+
T Consensus 161 -~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 -RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred -ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 344556778899999999975 667899999999999999999999999986655444333322221111111111
Q ss_pred ---ccc---ccCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 553 ---IID---PYLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 553 ---i~d---~~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+. |... ......-.....+.++|+.+|++.||++|||+.|.++
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 000 0000 0011111234568899999999999999999999984
No 17
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.2e-40 Score=399.89 Aligned_cols=267 Identities=25% Similarity=0.391 Sum_probs=216.9
Q ss_pred HhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
.....|...+.||+|+||.||+|+. .++..||||+++..... ..+|++++++++|||||+++|+|.+.+..++||
T Consensus 687 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 687 DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 3445678888999999999999986 56889999998654322 234688999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.++++. ++|..+.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+.....
T Consensus 763 Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-- 834 (968)
T PLN00113 763 EYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-- 834 (968)
T ss_pred eCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--
Confidence 99999999999953 8999999999999999999997666899999999999999999988876 776543211
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....+|+.|+|||++.+..++.|+|||||||++|||+||+.|++.... .......+...........+++|+.+.
T Consensus 835 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (968)
T PLN00113 835 ---DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIR 910 (968)
T ss_pred ---CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCcccc
Confidence 1233688999999999999999999999999999999999999864322 223344555444444555666777664
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
... ....+...++.+++.+||+.+|++||+|+||+++|+++...
T Consensus 911 ~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 911 GDV-SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CCC-CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 322 23345677889999999999999999999999999998653
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-40 Score=346.84 Aligned_cols=266 Identities=25% Similarity=0.324 Sum_probs=207.9
Q ss_pred cCccceeecccccEEEEEEE-EeCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV~ 399 (692)
.|+..++||+|.||.|||++ +.+|+.||+|+++... +....-..+||.||++|+||||++|.+...+. ...|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 45556789999999999998 5678999999998764 34456678999999999999999999999877 6899999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
|||+. +|.-++... +-.++..++..++.|++.||+|+|+ ++|+|||||.+|||||.+|.+||+|||||+++....
T Consensus 198 eYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred ecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99964 887777653 3469999999999999999999999 599999999999999999999999999999876666
Q ss_pred CcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc-------
Q 005536 480 SHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD------- 551 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 551 (692)
....+..+-|..|.|||++.+. .|+.+.|+||.||||.||++|++.+......++............+....
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~ 352 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA 352 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence 6667888889999999988765 89999999999999999999999998665544433322211111111111
Q ss_pred ccccccCCc--CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 552 EIIDPYLEP--HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 552 ei~d~~l~~--~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..+.+.... ...+.........++|+..+|..||++|.|+.+++
T Consensus 353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 111110000 00001112335678999999999999999999887
No 19
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=345.13 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=208.3
Q ss_pred CCCCCChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchh---HHHHHHHHHHHHhCCCCCeeeeE
Q 005536 310 SVPFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS---IDQVMNEIKLLSSVSHPNLLRLL 386 (692)
Q Consensus 310 ~~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~H~niv~l~ 386 (692)
.++.++.++++. .....||+|++|.||+|++ +++.||||+++...... .+.|.+|+.+|++++||||++++
T Consensus 11 ~~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 345556666633 2235799999999999987 68899999997653332 57788999999999999999999
Q ss_pred EEEEe----CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 387 GCCIE----EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 387 g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
|++.+ ....++||||+++|+|.+++... ..++|..+++++.+++.||+|||+. .+++||||||+|||+++++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~ 160 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENY 160 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCC
Confidence 99977 34678999999999999999764 4589999999999999999999974 3788999999999999999
Q ss_pred ceEEeeecCCccCCCCCCcccccCCCCCCCCCcccccc--CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH
Q 005536 463 RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY--FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 463 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~ 540 (692)
.+||+|||+++..... .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 161 ~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~------~- 229 (283)
T PHA02988 161 KLKIICHGLEKILSSP----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK------E- 229 (283)
T ss_pred cEEEcccchHhhhccc----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH------H-
Confidence 9999999999753221 123468899999999876 68999999999999999999999999743221 1
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
....+..+..... .+......+.+|+.+||+.||++|||++||++.|+.++.
T Consensus 230 ~~~~i~~~~~~~~-----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 230 IYDLIINKNNSLK-----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHhcCCCCC-----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1222211111100 011234578999999999999999999999999998763
No 20
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=346.25 Aligned_cols=264 Identities=27% Similarity=0.424 Sum_probs=200.3
Q ss_pred ccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHh--CCCCCeeeeEEEEEeCC----eeEEEEE
Q 005536 327 SEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSS--VSHPNLLRLLGCCIEEG----EPILVYE 400 (692)
Q Consensus 327 ~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~H~niv~l~g~~~~~~----~~~lV~E 400 (692)
+..+.||+|.||.||||++.+ +.||||++. .++.+.|++|-.|.+. |+|+||+++++.-.... +++||+|
T Consensus 213 ~l~eli~~Grfg~V~KaqL~~-~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLDN-RLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhccC-ceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 345679999999999999865 889999997 4566788999888875 57999999999876555 8999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAM------NPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~------~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
|.++|+|.+||..+ .++|....+||..+++||+|||+.. +++|+|||||++||||..|++..|+|||+|..
T Consensus 289 fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 289 FHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 99999999999875 4999999999999999999999854 57899999999999999999999999999976
Q ss_pred CCCCCC-cccccCCCCCCCCCccccccC-CCC-----CccceeehhHHHHHHHhCCcccCC-CCCcccccHH--------
Q 005536 475 GMTESS-HISTAPQGTPGYLDPQYHQYF-HLS-----DKSDVYSFGVVLIEIITALKVVDF-SRPHSEVNLA-------- 538 (692)
Q Consensus 475 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~-~~s-----~ksDV~SfGvll~eLltg~~p~~~-~~~~~~~~~~-------- 538 (692)
...... ......+||.+|||||++.+. .+. .+.||||+|.|||||+++-..++. ..+.-+..+.
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 443221 122336899999999998654 233 368999999999999998665532 1111111000
Q ss_pred -HHHHHH-hccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 539 -ALAIDR-IGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 539 -~~~~~~-~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+...+. +++.....+.|.-.. ..-+..+.+.+..||..|++.|.|+.=|.+++.++...
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~-------h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRK-------HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhc-------CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 111111 111111222222111 13456788999999999999999999999999887653
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-41 Score=360.80 Aligned_cols=266 Identities=27% Similarity=0.391 Sum_probs=215.8
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEeCC----CE-EEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEE
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHND----DW-VAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLG 387 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~----~~-vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g 387 (692)
...++...++....++||+|+||.||+|++... .. ||||..+.. ......+|++|.+++++++|||||+++|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 344555556666678999999999999997543 23 899999853 3667889999999999999999999999
Q ss_pred EEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEe
Q 005536 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVA 467 (692)
Q Consensus 388 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~ 467 (692)
++.....++||||+++||+|.+||++... .++..++++++.+.|.||+|||+ +++|||||.++|+|++.+..+||+
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeC
Confidence 99999999999999999999999998753 69999999999999999999999 499999999999999999999999
Q ss_pred eecCCccCCCCCCcccc-cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHh
Q 005536 468 DFGLSRLGMTESSHIST-APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRI 545 (692)
Q Consensus 468 DFGla~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~ 545 (692)
||||++.... ..... ...-..+|+|||.+..+.++.++|||||||++||+++ |..|+.... .. .+..++
T Consensus 305 DFGLs~~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~------~~-~v~~kI 375 (474)
T KOG0194|consen 305 DFGLSRAGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK------NY-EVKAKI 375 (474)
T ss_pred ccccccCCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC------HH-HHHHHH
Confidence 9999986431 11111 2235679999999999999999999999999999999 666765322 12 233334
Q ss_pred -ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 546 -GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 546 -~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
..+.... .+...+.++..+..+||..+|++||+|.++.+.|+.+....-
T Consensus 376 ~~~~~r~~------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 376 VKNGYRMP------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HhcCccCC------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 3222111 112345677888999999999999999999999999876543
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=353.22 Aligned_cols=249 Identities=28% Similarity=0.438 Sum_probs=213.5
Q ss_pred ccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
..|...++||+|+.|.||.++ ..+++.||||++........+-.++|+.+|+..+|+|||.+++.+...+++++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 456677789999999999997 5568899999999887777788899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++|+|.|.+.... +++.++..|+.++++||+|||. ++|+|||||.+||||+.++.+||+|||++..+..+.. .
T Consensus 353 ~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred CCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 9999999887643 9999999999999999999999 5999999999999999999999999999987554443 4
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....+|||.|||||+.....|..|.||||||++++||+-|++||-...+.. ++.++......++-.+
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-------AlyLIa~ng~P~lk~~------ 492 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPKLKNP------ 492 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-------HHHHHhhcCCCCcCCc------
Confidence 466789999999999999999999999999999999999999997544322 2334443333333222
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......+.+++.+||+.|+++||++.|+++
T Consensus 493 ----~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 ----EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ----cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 234467899999999999999999999984
No 23
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1e-40 Score=328.16 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=205.6
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
+.|+...++|+|+||+|||.+.++ |+.||||++..... .-.+-.++|+++|++++|+|+|.|+.+|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 356777889999999999999765 89999999986533 334557899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++. ++.+-|... ...++......++.|++.|+.|+|+. ++|||||||+||||+.++.+||+|||+|+.... ..
T Consensus 82 ~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred ecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 9965 444555544 34589999999999999999999994 999999999999999999999999999997543 45
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHh--------ccC-cc
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI--------GRG-CV 550 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~-~~ 550 (692)
...+..+.|..|.|||.+.+ .+|....||||+||++.||++|.+.|......++..+....+..+ ..+ ..
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 55677889999999999877 689999999999999999999999887654444433332222111 111 01
Q ss_pred cccccccC---CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 551 DEIIDPYL---EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 551 ~ei~d~~l---~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.-+.-|.. .+....+ .....-+++++..||+.||++|++-+|++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111110 0111111 133446889999999999999999998873
No 24
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.8e-40 Score=341.97 Aligned_cols=262 Identities=19% Similarity=0.217 Sum_probs=204.9
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.|+..+.||+|+||+||++.. .+++.||+|.+.... ......+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999985 468899999987542 2334568899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++|+|.+++.......+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--
Confidence 9999999988876544569999999999999999999999 49999999999999999999999999999763222
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......||..|+|||++.+..++.++|||||||++|||++|+.||........ .......+.....
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~---------- 222 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRVKEDQE---------- 222 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHhhcccc----------
Confidence 122345789999999999999999999999999999999999999975432211 1111111211100
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
..+.....++.+|+.+||+.+|++||++.+. ..+++..++|...
T Consensus 223 ---~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~--~~~~~~~h~~~~~ 266 (285)
T cd05631 223 ---EYSEKFSEDAKSICRMLLTKNPKERLGCRGN--GAAGVKQHPIFKN 266 (285)
T ss_pred ---cCCccCCHHHHHHHHHHhhcCHHHhcCCCCC--CHHHHhcCHhhcC
Confidence 1111233578899999999999999973221 1223335666543
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=335.07 Aligned_cols=261 Identities=24% Similarity=0.355 Sum_probs=210.7
Q ss_pred hccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.+.|+....||.|..++||+|+ ...++.||||++.... ....+.+.+|+..++.++||||++++..|..++.+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4578889999999999999998 5567999999998664 3346899999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
||.+|++.+.+...-...+++..+..|..++++||.|||+ +|.||||||+.|||||.+|.+||+|||.+........
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999988766779999999999999999999999 5999999999999999999999999998765333221
Q ss_pred c---ccccCCCCCCCCCccccc--cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 481 H---ISTAPQGTPGYLDPQYHQ--YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 481 ~---~~~~~~gt~~Y~aPE~~~--~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
. .....+||+.|||||++. -..|+.|+||||||++..||.+|..||....| ....+..+. +.......
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP------mkvLl~tLq-n~pp~~~t 254 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP------MKVLLLTLQ-NDPPTLLT 254 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh------HHHHHHHhc-CCCCCccc
Confidence 1 115568999999999843 33699999999999999999999999974433 122223333 22221111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+. .+........+.+++..||+.||++|||++++++
T Consensus 255 ~~~~---~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLD---KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCC---hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111 1122334457899999999999999999999874
No 26
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.7e-39 Score=333.45 Aligned_cols=256 Identities=23% Similarity=0.382 Sum_probs=210.5
Q ss_pred hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.++|+..++||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|+||+++++.+.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3568889999999999999999888889999998754 334678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.++++......+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 99999999987666679999999999999999999999 499999999999999999999999999998643322222
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++....++.++||||||+++|||+| |+.||..... ......+.++.... .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-------~~~~~~~~~~~~~~--------~ 225 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-------SDVMSALQRGYRMP--------R 225 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-------HHHHHHHHcCCCCC--------C
Confidence 233456778999999988899999999999999999998 8888853221 11222232221110 0
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
. .....++.+++.+||+.+|++||+++++.+.|+.+
T Consensus 226 ~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 226 M----ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred C----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0 11235688999999999999999999999999864
No 27
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=343.37 Aligned_cols=249 Identities=25% Similarity=0.346 Sum_probs=204.0
Q ss_pred HhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCee
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~ 395 (692)
+-.++|...+.||+|+|++|++++. ..++.||||++.+. .+...+-...|-.+|.+| .||.|++|+-.|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3446788899999999999999984 45889999999754 223344566799999999 799999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
|+|+||++||+|.++|++. +.+++.-....|.||+.||+|||+. |||||||||+|||||+|+++||+|||.|+.+
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999886 4589888999999999999999994 9999999999999999999999999999874
Q ss_pred CCCCC----------ccc--ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH
Q 005536 476 MTESS----------HIS--TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 476 ~~~~~----------~~~--~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~ 543 (692)
..... ... ...+||..|.+||++.....+..+|+|+|||+||+|+.|++||...++.. ..+
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-------iFq 297 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-------IFQ 297 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH-------HHH
Confidence 43111 111 34689999999999999999999999999999999999999997554321 122
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEV 594 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eV 594 (692)
+|.. +|- +++....+.+.+|+.+.|..||.+|+|.+||
T Consensus 298 kI~~------l~y-------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 298 KIQA------LDY-------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred HHHH------hcc-------cCCCCCCHHHHHHHHHHHccCccccccHHHH
Confidence 2221 011 1223344678899999999999999997444
No 28
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-39 Score=337.49 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=206.2
Q ss_pred hccCccceeecccccEEEEEEEEe----CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH----NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
.++|+..+.||+|+||.||+|.+. .+..||+|.++... ....+.|.+|+.++.+++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888999999999999999864 35689999998653 2345679999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++++||||||+|||++.++.+|++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997653 468999999999999999999998 4999999999999999999999999998765322
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
..........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+.+.++....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-------~~~~~~~~~~~~~---- 228 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-------DVIKAVEDGFRLP---- 228 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-------HHHHHHHCCCCCC----
Confidence 21111122345678999999999999999999999999999875 99988643221 1233333331111
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.+...+..+.+++.+||+.+|++||+++||.+.|+++
T Consensus 229 --------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 229 --------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0112345788999999999999999999999998764
No 29
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.7e-39 Score=339.19 Aligned_cols=262 Identities=25% Similarity=0.362 Sum_probs=201.4
Q ss_pred ccCccceeecccccEEEEEEEEeC-----------------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-----------------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRL 385 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l 385 (692)
++|...++||+|+||.||++.+.+ +..||+|.++... .....+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999997543 2369999987653 3345679999999999999999999
Q ss_pred EEEEEeCCeeEEEEEeCCCCCHHHHHhhcc-----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 005536 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRER-----------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYH 448 (692)
Q Consensus 386 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiH 448 (692)
++++.+.+..++||||+++|+|.+++.... ...++|..++.++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 999999999999999999999999986532 12478899999999999999999994 9999
Q ss_pred cCCCCCceEEcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhC--Ccc
Q 005536 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA--LKV 525 (692)
Q Consensus 449 rDik~~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg--~~p 525 (692)
|||||+|||+++++.+||+|||+++....... .......++..|+|||++....++.++||||||+++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999975322211 122334568899999999888999999999999999999975 445
Q ss_pred cCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 526 VDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+...... .........+......... ..+...+..+.+|+.+||+.+|++||||.||.+.|++
T Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDE---QVIENAGEFFRDQGRQVYL---------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHH---HHHHHHHHHhhhccccccc---------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5422211 1111111111111100000 0011234578999999999999999999999998863
No 30
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.3e-39 Score=333.20 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=204.9
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
+.|+..+.||+|+||.||++.+.++..+|+|.++.. ....++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457778899999999999999888888999998643 3345689999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+|+|.++++... ..+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++..........
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 999999997643 358999999999999999999998 4999999999999999999999999999876433222222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+.++... ..+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-------~~~~~~i~~~~~~--~~~~----- 224 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-------YEVVEMISRGFRL--YRPK----- 224 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCCC--CCCC-----
Confidence 23345678999999988889999999999999999999 8888853321 1122333333211 1111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
.....+.+|+.+||+.+|++||+|.|+++.|
T Consensus 225 -----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 -----LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -----CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1234689999999999999999999999876
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-40 Score=323.04 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=213.6
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||.|+||+|.+.+.+ ++..+|+|++.+.. ..+.+...+|..+|+.+.||.++++.+.+.+.+.+++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 34666889999999999999854 57889999998653 345567789999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|-|+.+|++. +++++....-+|.||+.||+|||+. +|++|||||+|||||.+|.+||.|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 999999999999875 4599999999999999999999994 999999999999999999999999999986322
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
..-...|||.|+|||.++...+..++|.|||||++|||+.|.+||...++ ....++|-++.+.
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-------~~iY~KI~~~~v~-------- 259 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-------IQIYEKILEGKVK-------- 259 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-------HHHHHHHHhCccc--------
Confidence 23556899999999999999999999999999999999999999986654 2345555554332
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHhhhhccccccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMR-PTMMEVAEELEHIRVSSWASNIYM 612 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~R-Psm~eVl~~L~~i~~~~~~~~~~~ 612 (692)
.+.-...++.+|+.+.|+.|-.+| -.+. .=-+.|+.++|...+.+
T Consensus 260 -----fP~~fs~~~kdLl~~LL~vD~t~R~gnlk---nG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 260 -----FPSYFSSDAKDLLKKLLQVDLTKRFGNLK---NGVEDIKNHPWFKGVDW 305 (355)
T ss_pred -----CCcccCHHHHHHHHHHHhhhhHhhhcCcC---CCccccccCcccccccH
Confidence 111222467899999999999999 2222 12357788999876654
No 32
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.1e-39 Score=334.49 Aligned_cols=257 Identities=27% Similarity=0.399 Sum_probs=209.5
Q ss_pred hhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..++|+..+.||+|++|.||+|...+++.||+|.++... ...++|.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 456788899999999999999998788889999987543 3457799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++....+..+++..+..++.|++.||.|||+ ++|+||||||+||++++++.+||+|||+++........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 999999999987655679999999999999999999998 49999999999999999999999999999864322211
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......+..|+|||++.+..++.++||||||+++|||++ |+.|+..... ......+.++....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~-------- 224 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-------AEVLQQVDQGYRMP-------- 224 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCC--------
Confidence 1122233468999999998899999999999999999999 8888853221 11122222211100
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.+......+.+++.+||+.+|++||++.++++.|+.+
T Consensus 225 ----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 225 ----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0112345788999999999999999999999999863
No 33
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8e-40 Score=337.22 Aligned_cols=258 Identities=28% Similarity=0.427 Sum_probs=214.2
Q ss_pred HhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
....+|+..++||+|+||+||+|+..++..+++|.+.........++.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 45567888999999999999999988899999999987766567789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++....+..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||++...... .
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~-~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKED-V 158 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCc-c
Confidence 9999999999987666679999999999999999999998 59999999999999999999999999999764322 2
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......++..|++||.+....++.++||||||+++|||++ |+.|+...... .....+..+....
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~------- 224 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-------EVYDQITAGYRMP------- 224 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-------HHHHHHHhCCcCC-------
Confidence 22223456778999999988899999999999999999998 78888643211 1112222211100
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.+......+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 225 -----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 225 -----CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0112345788999999999999999999999999864
No 34
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.4e-39 Score=334.47 Aligned_cols=255 Identities=29% Similarity=0.446 Sum_probs=208.1
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
..|+..++||+|+||.||+|...+ ++.||+|.++.. ....+++.+|++++++++|+||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 457788899999999999998654 788999998754 445678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.......+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++.........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 99999999987655679999999999999999999998 599999999999999999999999999997643322222
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++.+..++.++||||||+++|||++ |..|+..... ....+.+..+...+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~--------- 225 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQVYELLEKGYRME--------- 225 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCCCC---------
Confidence 222345678999999998999999999999999999998 8888763321 11122232221111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.+...+.++.+++.+||+.+|++||++.+++++|+.+
T Consensus 226 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 ---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0112345788999999999999999999999999875
No 35
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=344.47 Aligned_cols=256 Identities=26% Similarity=0.351 Sum_probs=209.5
Q ss_pred HhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC----Cc-hhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCC
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR----DT-DSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEG 393 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~ 393 (692)
...++|...+.||+|+||+|+.|.. .+++.||||.+... .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4557899999999999999999974 45799999976653 11 23455668999999999 999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CceEEeeecCC
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFGLS 472 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~kl~DFGla 472 (692)
..++||||+.+|+|.+++.. ...+.+.....++.|++.|++|+|+ ++|+||||||+|||||.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999988 3558889999999999999999999 499999999999999999 99999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccCC-CC-CccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFH-LS-DKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
.... ..........||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+... ... ....+.++..
T Consensus 169 ~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~-l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPN-LYRKIRKGEF 240 (370)
T ss_pred cccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHH-HHHHHhcCCc
Confidence 8743 2334456778999999999999877 76 68999999999999999999998522 122 2222444322
Q ss_pred cccccccCCcCCCccCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 551 DEIIDPYLEPHRDAWTLSS-IHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~-~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.- +... ..++..|+.+||+.+|.+|+++.||+ .++|...
T Consensus 241 ~~-------------p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-------~h~w~~~ 280 (370)
T KOG0583|consen 241 KI-------------PSYLLSPEARSLIEKMLVPDPSTRITLLEIL-------EHPWFQK 280 (370)
T ss_pred cC-------------CCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-------hChhhcc
Confidence 10 0011 45788999999999999999977776 5677654
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.7e-39 Score=352.03 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=205.2
Q ss_pred hhccCccceeecccccEEEEEEEE------eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCC
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL------HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEG 393 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~ 393 (692)
..++|+..+.||+|+||+||+++. .++..||||+++... ....+.+.+|+.++..+ +||||+++++++.+.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345788899999999999999974 235579999997543 34456789999999999 8999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccC---------------------------------------------------------
Q 005536 394 EPILVYEFMPNGTLCQHLQRERG--------------------------------------------------------- 416 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 416 (692)
..++||||+++|+|.++++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999999999999975321
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 417 ----------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 417 ----------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
..++|..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 247899999999999999999999 4999999999999999999999999999976433221
Q ss_pred c-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 481 H-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 481 ~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
. ......++..|+|||++.+..++.++||||||+++|||++ |..||...... ....+.+.++.... .+
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~-- 339 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKEGYRML--SP-- 339 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHhCccCC--CC--
Confidence 1 1223345678999999999999999999999999999998 77787533211 11222233221111 00
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.....++.+|+.+||+.+|++||+|.||+++|++.
T Consensus 340 --------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 --------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11234788999999999999999999999999863
No 37
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2e-39 Score=334.83 Aligned_cols=249 Identities=32% Similarity=0.497 Sum_probs=196.8
Q ss_pred cceeecccccEEEEEEEEe-----CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 328 EKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+.||.|.||.||+|.+. .+..|+||.++... ....++|.+|++++++++||||++++|++.+.+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999987 24679999997543 34578999999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC-CCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~-~~~ 480 (692)
+++|+|.++|.......+++..++.|+.|+|+||+|||+ .+|+|+||+++|||+++++.+||+|||+++.... ...
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999998755679999999999999999999999 4899999999999999999999999999986422 122
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
...........|+|||.+....++.++||||||+++|||++ |+.|+.... .......+.++......
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~----- 227 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-------NEEIIEKLKQGQRLPIP----- 227 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-------HHHHHHHHHTTEETTSB-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccceec-----
Confidence 22334457789999999999999999999999999999999 677764321 12223344433322211
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
......+.+++.+||..+|++||+|.+++++|
T Consensus 228 -------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 -------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11235688999999999999999999999886
No 38
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=348.40 Aligned_cols=264 Identities=30% Similarity=0.461 Sum_probs=225.6
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE 394 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~ 394 (692)
++++|--.......++||-|.||.||.|.+.. .-.||||.++. +....++|++|..+|+.++|||+|+|+|+|..+-.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 36666666777788999999999999999876 45799999975 46778999999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
+|||+|||.+|+|.+||.+.....++--..+.+|.||+.|+.||.. +.+|||||.++|.|+.++..+||+||||+++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhh
Confidence 9999999999999999998877778888999999999999999998 5999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 475 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
...+.........-...|.|||-+....++.|||||+|||+||||.| |..|+. .+++.+ +.+.+++|-
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP------GidlSq-VY~LLEkgy---- 483 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ-VYGLLEKGY---- 483 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC------CccHHH-HHHHHhccc----
Confidence 66665555555556789999999999999999999999999999998 766664 233332 344444431
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
+-+.+..++..+.+|++.||+.+|.+||++.|+-+.+|.+-
T Consensus 484 --------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 484 --------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred --------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 11234467789999999999999999999999999998754
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.7e-39 Score=337.98 Aligned_cols=267 Identities=22% Similarity=0.293 Sum_probs=214.2
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
-.+.|+..+.||+|+||.||+++.. .|..+|+|++++.. ..+.+....|-.+|...++|.||+|+..|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999855 48999999999764 4456778899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||++||++..+|... ..|++......+.+++.|+.-||+. |+|||||||+|+|||..|++||+||||+.-...
T Consensus 219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999875 5699999999999999999999996 999999999999999999999999999842110
Q ss_pred ----C-------------------CC----cc-------------------cccCCCCCCCCCccccccCCCCCccceee
Q 005536 478 ----E-------------------SS----HI-------------------STAPQGTPGYLDPQYHQYFHLSDKSDVYS 511 (692)
Q Consensus 478 ----~-------------------~~----~~-------------------~~~~~gt~~Y~aPE~~~~~~~s~ksDV~S 511 (692)
+ .. .. ....+|||.|||||++.+..|+...|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 00 00 01135999999999999999999999999
Q ss_pred hhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCH
Q 005536 512 FGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTM 591 (692)
Q Consensus 512 fGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm 591 (692)
||+|+||||.|.+||....+.+- +.++...+..-. - +... ....+..+||.+|+. ||++|.-.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T-------~rkI~nwr~~l~-f----P~~~----~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQET-------YRKIVNWRETLK-F----PEEV----DLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHH-------HHHHHHHhhhcc-C----CCcC----cccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999999986665332 222222211000 0 0001 122678899999999 99999762
Q ss_pred HHHHHHHHhhhhcccccccccCC
Q 005536 592 MEVAEELEHIRVSSWASNIYMGS 614 (692)
Q Consensus 592 ~eVl~~L~~i~~~~~~~~~~~~s 614 (692)
.-+++|+.++|+..+.|..
T Consensus 437 ----~G~~EIK~HPfF~~v~W~~ 455 (550)
T KOG0605|consen 437 ----KGAEEIKKHPFFKGVDWDH 455 (550)
T ss_pred ----ccHHHHhcCCccccCCcch
Confidence 3356788999998776533
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.7e-39 Score=350.71 Aligned_cols=261 Identities=25% Similarity=0.368 Sum_probs=205.8
Q ss_pred HHhhccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEe
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIE 391 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~ 391 (692)
.-..++|+..+.||+|+||.||+++.. ++..||||+++... ....+.+.+|+.+++.+ +|+||+++++++.+
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 334567888999999999999998742 23579999997543 33456788999999999 89999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhcc--------------------------------------------------------
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRER-------------------------------------------------------- 415 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~-------------------------------------------------------- 415 (692)
.+..++||||+++|+|.+++....
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 999999999999999999986431
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc-c
Q 005536 416 ------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH-I 482 (692)
Q Consensus 416 ------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~-~ 482 (692)
...+++..+++|+.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++........ .
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 1247888999999999999999999 59999999999999999999999999999754332211 1
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||....... .....+..+.... .+
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~~~~~~~~~--~~----- 337 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKMVKRGYQMS--RP----- 337 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHHHHcccCcc--CC-----
Confidence 223345678999999998899999999999999999997 999986432211 1112222111000 00
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.....++.+++.+||+.+|++||++.+|+++|+++
T Consensus 338 -----~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 338 -----DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred -----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01235788999999999999999999999999986
No 41
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.4e-39 Score=342.10 Aligned_cols=240 Identities=25% Similarity=0.320 Sum_probs=194.6
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.||+|+||.||+++.. +++.||+|.++.. .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 5889999999754 2345567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 154 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccccc
Confidence 999988764 458999999999999999999999 499999999999999999999999999987532221 22234
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.+..+... .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-------~~~~~~~~~~~~-------------~ 214 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------RLFELILMEEIR-------------F 214 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCCC-------------C
Confidence 56999999999999999999999999999999999999998643221 111112111110 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRP-----TMMEVA 595 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl 595 (692)
+.....++.+|+.+||+.+|++|| ++.+++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l 249 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 249 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHH
Confidence 112335678999999999999998 666665
No 42
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.8e-39 Score=340.21 Aligned_cols=258 Identities=24% Similarity=0.381 Sum_probs=204.4
Q ss_pred ccCccceeecccccEEEEEEEEeC-CC----EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DD----WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
..|+..+.||+|+||+||+|++.. ++ .||+|.++... ....++|.+|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 458889999999999999998643 33 38999987543 34567899999999999999999999999765 5789
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999998653 458999999999999999999999 4999999999999999999999999999986443
Q ss_pred CCCcc-cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSHI-STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
..... .....++..|+|||++.+..++.++||||||+++|||++ |+.|++..... .....+..+.... .
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~--~ 232 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERLP--Q 232 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHhCCCCCC--C
Confidence 22221 122335678999999999999999999999999999998 88888632211 1112222211100 0
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 605 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~ 605 (692)
+......+.+++.+||+.+|.+||++.+++..|.++...+
T Consensus 233 ----------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 233 ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0112346789999999999999999999999999886543
No 43
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-39 Score=342.66 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=209.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|...+.||+|.||.||||+.+ +.+.||+|.+.+.. +.+.+.+.+|++|+++++|||||.++++|+...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56888889999999999999854 46889999997653 4457789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+.+ +|..+|... ..++++....|+.++..||.|||+. +|+|||+||+||||+.++.+|++|||+|+. +....
T Consensus 82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~-m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARA-MSTNT 154 (808)
T ss_pred hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhh-cccCc
Confidence 9965 999999864 4599999999999999999999995 999999999999999999999999999997 44456
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
...+...|||-|||||+..+.+|+..+|.||+||+|||+++|++||.... .....+.|... +
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-------i~~Lv~~I~~d-------~---- 216 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-------ITQLVKSILKD-------P---- 216 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-------HHHHHHHHhcC-------C----
Confidence 67788899999999999999999999999999999999999999996211 11122233221 1
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..++......+..++...|..||.+|.+..+++.
T Consensus 217 --v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 --VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred --CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1223355667889999999999999999888763
No 44
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-38 Score=330.08 Aligned_cols=255 Identities=24% Similarity=0.393 Sum_probs=207.1
Q ss_pred ccCccceeecccccEEEEEEEEeC----CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
++|+..+.||+|+||+||+|++.. ...||||.++... ....++|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999998743 3579999987543 33456799999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC-
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT- 477 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~- 477 (692)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999997654 368999999999999999999999 5999999999999999999999999999986432
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
..........++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ....+.+.++...+.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--- 229 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN-------QDVIKAVEDGYRLPP--- 229 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH-------HHHHHHHHcCCCCCC---
Confidence 11112223345678999999998899999999999999999998 8888753211 112233332211110
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+......+.+|+.+||+.+|++||++.||++.|+++
T Consensus 230 ---------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 230 ---------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112345788999999999999999999999999875
No 45
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.8e-39 Score=334.56 Aligned_cols=256 Identities=28% Similarity=0.409 Sum_probs=207.7
Q ss_pred ccCccceeecccccEEEEEEEEeCC------CEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHND------DWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
+.|+..+.||+|+||.||+|..... ..|++|.++... ....++|.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 3577788999999999999986442 479999987543 334567899999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 397 LVYEFMPNGTLCQHLQRERG--------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
++|||+++++|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence 99999999999999976422 348899999999999999999999 4999999999999999999
Q ss_pred ceEEeeecCCccCCCCC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHH
Q 005536 463 RSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 463 ~~kl~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~ 540 (692)
.+||+|||+++...... ........+++.|+|||++.+..++.++||||||+++|||++ |..||....+ ..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-------~~ 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-------QE 234 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-------HH
Confidence 99999999997543222 122234456889999999988899999999999999999998 9888864322 11
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
..+.+..+..... +...+.++.+|+.+||+.+|.+||++.||++.|+.+
T Consensus 235 ~~~~i~~~~~~~~------------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEMIRSRQLLPC------------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHcCCcCCC------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 2333333322211 123446889999999999999999999999999763
No 46
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.7e-39 Score=330.07 Aligned_cols=252 Identities=26% Similarity=0.398 Sum_probs=204.5
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
+.|...+.||+|+||+||+|+..++..+|+|.++.. ....++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 356778899999999999999877778999998754 3345779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+|+|.+++.... ..+++..++.++.|++.||+|||+ .+++|+||||+|||+++++.+||+|||+++..........
T Consensus 83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 999999997653 368999999999999999999998 4999999999999999999999999999876433222222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++..|++||++.+..++.++||||||+++|||++ |+.|+..... ......+.++.....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--------- 222 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-------SETVEKVSQGLRLYR--------- 222 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-------HHHHHHHhcCCCCCC---------
Confidence 23346678999999998889999999999999999999 8888753321 112223322211110
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
+......+.+++.+||+.+|.+||++.+|++.|+
T Consensus 223 ---~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 ---PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0112357899999999999999999999998764
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=344.15 Aligned_cols=264 Identities=25% Similarity=0.357 Sum_probs=213.2
Q ss_pred hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.+.....++||+|.||.|.+.....+..||||+++.... ....+|.+|+++|.+++||||+.|+|+|..++.+++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 345566789999999999999998889999999997754 4458999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC-C
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-S 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~-~ 480 (692)
|++|+|.++|..+....+.-..-++|+.|||.||+||.+. +++||||.++|+|+|.++++||+|||++|-..... .
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999999987655556667788999999999999996 99999999999999999999999999999644433 3
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh--CCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT--ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
+.....+-..+|||||.+..++++.+||||+|||+|||+++ ..+|+....... ..+.. .++++..-
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~---------~~~~~~~~ 761 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENA---------GEFFRDQG 761 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhh---------hhhcCCCC
Confidence 34445556789999999999999999999999999999986 666765222111 01111 11111111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.......+.-++..+.+|+.+||+.+-++||+++++...|.+.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111123345677899999999999999999999999888764
No 48
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-38 Score=341.52 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=202.4
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||+++..+ ++.||||+++... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 468889999999999999999764 7899999997542 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999754 458999999999999999999999 4999999999999999999999999999975322
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+.... +.+..
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-------~~~~i~~~~--~~~~~--- 219 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-------TWENLKYWK--ETLQR--- 219 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-------HHHHHHhcc--ccccC---
Confidence 2244579999999999998899999999999999999999999997443211 111111110 00000
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+...........++.+|+.+||+.+|++||++.|++
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll 255 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK 255 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence 000000012345788999999999999999988776
No 49
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-40 Score=343.25 Aligned_cols=248 Identities=28% Similarity=0.431 Sum_probs=202.3
Q ss_pred CCCChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe
Q 005536 312 PFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391 (692)
Q Consensus 312 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~ 391 (692)
...|++++.. .+-||.|+.|.||+|++++ +.||||+++.-. ..+|+-|++|+|+||+.|.|+|..
T Consensus 119 WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~n-etVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 119 WEIPFEEISE-------LEWLGSGAQGAVFLGRLHN-ETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred ccCCHHHhhh-------hhhhccCcccceeeeeccC-ceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC
Confidence 3456666543 5679999999999999964 569999986321 257888999999999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
...++|||||++.|-|...|+.. ..++......|..+||.|+.|||.+ .|||||||+-||||..+..+||+|||-
T Consensus 184 sPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGT 258 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGT 258 (904)
T ss_pred CceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccc
Confidence 99999999999999999999764 5688889999999999999999995 999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
++...+. .......||..|||||++++.+.++|.|||||||||||||||..|+..-.....+ --++.+.+
T Consensus 259 S~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII-------wGVGsNsL- 328 (904)
T KOG4721|consen 259 SKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII-------WGVGSNSL- 328 (904)
T ss_pred hHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE-------EeccCCcc-
Confidence 9863332 2234557999999999999999999999999999999999999988532221111 01111111
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
. -..+..+++.+.-|+++||+..|..||++++++..|+
T Consensus 329 -------~---LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 329 -------H---LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred -------c---ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 1 1223456678888999999999999999999998875
No 50
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.9e-39 Score=334.16 Aligned_cols=267 Identities=21% Similarity=0.241 Sum_probs=201.0
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|+||+||+++.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999975 47889999997542 3345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++++.|..+.. . ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~~~-~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEE-M-PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHh-c-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 999877755443 2 3458999999999999999999998 4999999999999999999999999999986433222
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHH--------HHHh-ccCccc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA--------IDRI-GRGCVD 551 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~--------~~~~-~~~~~~ 551 (692)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...+ ......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2333456899999999999888999999999999999999999999743321111100000 0000 000000
Q ss_pred ccccccCCcCC---CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 552 EIIDPYLEPHR---DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 552 ei~d~~l~~~~---~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
....+...... ..........+.+|+.+||+.||++|||++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 00000000000 000112345789999999999999999999887
No 51
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.3e-38 Score=336.85 Aligned_cols=199 Identities=27% Similarity=0.387 Sum_probs=175.4
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.++|+..+.||+|+||.||+++.. ++..||+|.+.... ....+++.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467899999999999999999865 47789999987653 3345679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++... ..+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 99999999999764 3589999999999999999999984 36999999999999999999999999998753221
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDF 528 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~ 528 (692)
......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 22345689999999999999999999999999999999999999964
No 52
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.1e-39 Score=311.48 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=206.5
Q ss_pred ccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCch--hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.+|...++||+|.||.||+|+ ...|+.||||+++..+.. -.....+|++.|+.++|+||+.|++++.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 357778899999999999998 456899999999876432 23467899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
||+ -+|+..++.+ ...++...+..++.++++||+|||+ +.|+||||||+|+|++.++.+||+|||+|+.+....
T Consensus 82 fm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~- 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN- 155 (318)
T ss_pred ecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCC-
Confidence 995 5898888765 4568999999999999999999999 499999999999999999999999999999855433
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC-
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL- 558 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l- 558 (692)
...+..+-|..|.|||.+.+ .+|+...|+||.||++.||+-|.+-|..... ++........++.-..+++.+-.-
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD---idQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD---IDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch---HHHHHHHHHHcCCCCcccCcccccc
Confidence 33344478999999998765 4799999999999999999999877765433 333333444444322222211100
Q ss_pred ----------CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 559 ----------EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 559 ----------~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+..+..-....+++.+|+.+++.+||.+|.+++|+++
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 00011111234456799999999999999999999873
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-38 Score=340.30 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=199.7
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.||+|+||+||+++.. +++.||||+++.. ......++.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 5889999999754 2344567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccc
Confidence 999999764 4589999999999999999999994 9999999999999999999999999998753221 122234
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+..+.. . .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~------~-------~ 214 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEI------R-------F 214 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCC------C-------C
Confidence 5699999999999999999999999999999999999999863221 111222222111 0 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhhhccccccc
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRP-----TMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl~~L~~i~~~~~~~~~ 610 (692)
+.....++.+|+.+||+.||++|| ++.+++ .++|....
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll-------~h~~f~~~ 257 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIM-------EHRFFASI 257 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHH-------cCCCcCCC
Confidence 112335688999999999999999 666665 56666543
No 54
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=339.84 Aligned_cols=255 Identities=25% Similarity=0.363 Sum_probs=206.0
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|...+.||+|+||+||+++.. +++.||+|.++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 47899999997542 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 999999999999764 458899999999999999999999 49999999999999999999999999999763222
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||....+ ....+.+.++... +
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-------~~~~~~i~~~~~~-~------ 234 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-------FRIYEKILAGRLK-F------ 234 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-------HHHHHHHhcCCcC-C------
Confidence 1234689999999999999999999999999999999999999864321 1123333333211 0
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
+.....++.+|+.+||+.||.+||+. +...+++|..++|...
T Consensus 235 ------p~~~~~~~~~li~~~L~~dP~~R~~~--~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 235 ------PNWFDGRARDLVKGLLQTDHTKRLGT--LKGGVADVKNHPYFHG 276 (329)
T ss_pred ------CCCCCHHHHHHHHHHhhcCHHHcCCC--CCCCHHHHhcCCccCC
Confidence 00122467899999999999999972 1122455557777654
No 55
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.7e-38 Score=337.13 Aligned_cols=261 Identities=24% Similarity=0.351 Sum_probs=204.4
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||.||+++.. +++.||||.++.. .....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 5789999999854 233456788999999998 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCccc
Confidence 9999988754 459999999999999999999999 49999999999999999999999999998742221 12233
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcc--cccHHHHHHHHhccCcccccccccCCcCC
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHS--EVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||+...... ......+..+.+.++... +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---- 224 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------I---- 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------C----
Confidence 4579999999999999999999999999999999999999997432221 111222223333322111 0
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
+.....++.+++.+||+.+|.+||++... ..++++..++|....
T Consensus 225 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~-~~~~~i~~hp~~~~~ 268 (329)
T cd05588 225 ---PRSLSVKASSVLKGFLNKDPKERLGCHPQ-TGFRDIKSHPFFRNI 268 (329)
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCCCC-CCHHHHhcCCCCCCC
Confidence 11123467899999999999999984322 224555678887644
No 56
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-38 Score=333.03 Aligned_cols=263 Identities=23% Similarity=0.342 Sum_probs=197.1
Q ss_pred ccCccceeecccccEEEEEEEEe--CCCEEEEEEeecCC--chhHHHHHHHHHHHHhC---CCCCeeeeEEEEEe-----
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH--NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSV---SHPNLLRLLGCCIE----- 391 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l---~H~niv~l~g~~~~----- 391 (692)
++|+..+.||+|+||+||+++.. +++.||+|+++... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999863 46789999987543 22334566788777766 69999999999863
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
....++||||++ ++|.+++.......+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 346899999995 699999987655669999999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
++..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ......+........
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~ 231 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 231 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChh
Confidence 9753222 22344568999999999988899999999999999999999999987543322 111122211100000
Q ss_pred ----------ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 552 ----------EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 552 ----------ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..+.+................+.+|+.+||+.+|++|||+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 00000000000000112335678999999999999999999987
No 57
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-38 Score=327.76 Aligned_cols=254 Identities=25% Similarity=0.394 Sum_probs=205.3
Q ss_pred hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.++|+..++||+|+||.||++...++..||+|.++.... ..+.|.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 356788899999999999999988888899999976433 4567999999999999999999999875 45689999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.++++......+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 99999999987655668999999999999999999999 499999999999999999999999999997643322222
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+..+...+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~--------- 223 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-------REVLEQVERGYRMP--------- 223 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCC---------
Confidence 222345678999999988899999999999999999999 8888853221 11222232221110
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.+......+.+|+.+||+.+|++|||+.++.+.|++
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 ---CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111233578899999999999999999999999875
No 58
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.9e-38 Score=324.03 Aligned_cols=255 Identities=27% Similarity=0.390 Sum_probs=208.8
Q ss_pred hhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+.|+..++||+|+||.||++...+++.||+|.+.... ...++|.+|+.++++++|+||+++++++ ..+..+++|||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence 456788899999999999999998889999999987543 3457899999999999999999999986 45678999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++....+..+++..++.++.|++.||+|||+ .+++||||||+||++++++.++|+|||++.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 999999999987666679999999999999999999998 49999999999999999999999999999764322222
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
......++..|+|||++....++.++||||||+++|||++ |+.||...... ...+.+.++...+.
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~------- 224 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-------EVIQNLERGYRMPR------- 224 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-------HHHHHHHcCCCCCC-------
Confidence 2233456789999999998899999999999999999999 99988633211 11222322211111
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+.....++.+++.+||+.+|++||+++++.+.|+.
T Consensus 225 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 -----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01123578999999999999999999999999875
No 59
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2e-38 Score=327.65 Aligned_cols=255 Identities=26% Similarity=0.381 Sum_probs=206.1
Q ss_pred hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.++|...++||+|+||+||+|+..+...||+|+++... ...++|.+|++++++++|+||+++++.+. .+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 45688999999999999999998777789999997543 34567999999999999999999999874 45689999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++|+|.+++.......+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 99999999987655568999999999999999999999 599999999999999999999999999997643322222
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|++||+..+..++.++||||||+++|||++ |+.||...... .....+..+...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~---------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERGYRM---------- 222 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-------HHHHHHhcCCCC----------
Confidence 223456778999999988899999999999999999999 77777533211 112222221100
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.........+.+|+.+|++.+|++||++.++++.|+..
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 01123446788999999999999999999999999864
No 60
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.7e-38 Score=346.04 Aligned_cols=262 Identities=23% Similarity=0.349 Sum_probs=208.1
Q ss_pred HHhhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEe
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIE 391 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~ 391 (692)
+...++|...++||+|+||.||+|+... ...||||+++... ....+.|.+|+++++++. ||||+++++++.+
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3445678889999999999999998532 2369999997543 334567999999999996 9999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhcc--------------------------------------------------------
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRER-------------------------------------------------------- 415 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~-------------------------------------------------------- 415 (692)
.+..+|||||+++|+|.++|+...
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 999999999999999999987532
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceE
Q 005536 416 --------------------------------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNIL 457 (692)
Q Consensus 416 --------------------------------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NIL 457 (692)
...+++..++.++.|++.||+|||+ .+|+||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEE
Confidence 1247888999999999999999999 49999999999999
Q ss_pred EcCCCceEEeeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccc
Q 005536 458 LDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEV 535 (692)
Q Consensus 458 ld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~ 535 (692)
+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|+......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--- 346 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--- 346 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh---
Confidence 999999999999999864332221 1223457789999999998899999999999999999997 88887633211
Q ss_pred cHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 536 NLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 536 ~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
......+..+.... .+.....++.+++.+||+.+|++||++.+|+++|+++.
T Consensus 347 ---~~~~~~~~~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 ---STFYNKIKSGYRMA------------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ---HHHHHHHhcCCCCC------------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11222232221110 01123457889999999999999999999999999864
No 61
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-38 Score=333.50 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=210.8
Q ss_pred ccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
.+|...+.||+|+||.||+++.. ++..+++|.++.......+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999743 245689999876655666789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 398 VYEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 999999999999997542 1348999999999999999999998 59999999999999999999
Q ss_pred eEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHH
Q 005536 464 SKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALA 541 (692)
Q Consensus 464 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~ 541 (692)
+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||+| |+.|+...... ..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~~ 234 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-------EV 234 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HH
Confidence 99999999975332221 22234456889999999998899999999999999999999 98887543221 12
Q ss_pred HHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 542 ~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+.+..+...+.. ...+..+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 235 ~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 235 IECITQGRVLERP------------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHhCCCCCCCC------------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 3333333222211 12335788999999999999999999999999999654
No 62
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-38 Score=332.79 Aligned_cols=259 Identities=26% Similarity=0.399 Sum_probs=210.6
Q ss_pred ccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
++|...+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888899999999999999742 235689999876655667789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcc-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEE
Q 005536 398 VYEFMPNGTLCQHLQRER-----------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKV 466 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl 466 (692)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+ ++++||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 999999999999997542 1248999999999999999999998 49999999999999999999999
Q ss_pred eeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHH
Q 005536 467 ADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDR 544 (692)
Q Consensus 467 ~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~ 544 (692)
+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-------~~~~~~ 234 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIEC 234 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHH
Confidence 99999975432221 11223346788999999998899999999999999999998 8888753321 112333
Q ss_pred hccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 545 IGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 545 ~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+..+...... ......+.+|+.+||+.+|.+|||+.||++.|+++...
T Consensus 235 i~~~~~~~~~------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGRVLQRP------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCCcCCCC------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 4433322110 11234689999999999999999999999999998754
No 63
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.6e-38 Score=333.28 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=199.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|...++||+|+||+||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888999999999999999865 57899999987543 23345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++ ++|.+++... +..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 85 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~-~~ 158 (288)
T cd07871 85 LD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP-TK 158 (288)
T ss_pred CC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC-Cc
Confidence 96 5999988754 3458899999999999999999999 49999999999999999999999999999753221 12
Q ss_pred ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC---cccc-----
Q 005536 482 ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG---CVDE----- 552 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~e----- 552 (692)
......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.... ....+... ...+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL---IFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChHHhhccccch
Confidence 2234568999999998765 5689999999999999999999999975433222111 11111100 0000
Q ss_pred ----cccccCCcC-CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 553 ----IIDPYLEPH-RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 553 ----i~d~~l~~~-~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...+..... ..........+..+|+.+||+.||.+|||++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 000000000 0000011234678999999999999999999987
No 64
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.8e-39 Score=335.48 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=203.9
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999865 57899999997542 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999999764 458999999999999999999999 49999999999999999999999999999763221
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+.+..+...
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~-------- 216 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-------FGIYEKILAGKLE-------- 216 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcC--------
Confidence 1234689999999999988999999999999999999999999864322 1122333322211
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHhhhhcccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPT-MMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs-m~eVl~~L~~i~~~~~~~~ 609 (692)
.+......+.+|+.+||+.||.+||+ |.+ .++++..++|...
T Consensus 217 -----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~---~~~~~l~h~~~~~ 259 (291)
T cd05612 217 -----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKN---GADDVKNHRWFKS 259 (291)
T ss_pred -----CCccCCHHHHHHHHHHcCCCHHHccCCccC---CHHHHhcCccccC
Confidence 01112346789999999999999995 111 1233347777654
No 65
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.6e-38 Score=327.00 Aligned_cols=250 Identities=27% Similarity=0.413 Sum_probs=202.6
Q ss_pred cCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
.|+..+.||+|+||.||+++..++..+|+|.+.... ...++|.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 467788999999999999998777789999986442 3446788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...........
T Consensus 84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 99999997653 368999999999999999999999 49999999999999999999999999999764332222222
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
...++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+..+....
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~----------- 221 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-------EVVESVSAGYRLY----------- 221 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-------HHHHHHHcCCcCC-----------
Confidence 2334568999999998899999999999999999999 78888643221 1122222221100
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
.+.....++.+|+.+||+.+|++||||.||++.|
T Consensus 222 -~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 -RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0112345789999999999999999999999876
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5e-38 Score=335.90 Aligned_cols=240 Identities=24% Similarity=0.326 Sum_probs=195.3
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.||+|+||.||+++.. +++.||+|+++.. ......++.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999854 5889999999754 2345667889999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKT 154 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccccc
Confidence 999988764 458999999999999999999999 499999999999999999999999999987532221 22234
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+..+.. . .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-------~~~~~~~~~~~------~-------~ 214 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEDI------K-------F 214 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-------HHHHHhccCCc------c-------C
Confidence 57999999999999889999999999999999999999998643211 11122211111 0 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRP-----TMMEVA 595 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl 595 (692)
+.....++.+|+.+||+.+|++|| ++.|++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 112335678999999999999997 777765
No 67
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-38 Score=338.38 Aligned_cols=249 Identities=23% Similarity=0.303 Sum_probs=198.9
Q ss_pred eeecccccEEEEEEEE-eCCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.||+|+||+||+++. .+++.||+|.++.. ......++.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 45789999999754 2334567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
+|.+++... ..+++..+..++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 155 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKT 155 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccc
Confidence 999988754 4589999999999999999999973 489999999999999999999999999987532222 22234
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+..+... +
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-------~~~~~i~~~~~~------~------- 215 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEEIR------F------- 215 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-------HHHHHHhcCCCC------C-------
Confidence 56999999999999989999999999999999999999998643211 111222111110 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhhhccccccc
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRP-----TMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl~~L~~i~~~~~~~~~ 610 (692)
+.....++.+|+.+||+.||++|+ ++.+++ .++|....
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il-------~h~~~~~~ 258 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIM-------QHKFFAGI 258 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHh-------cCCCcCCC
Confidence 111234678999999999999997 777776 45665543
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.3e-38 Score=334.67 Aligned_cols=262 Identities=23% Similarity=0.274 Sum_probs=202.0
Q ss_pred cCccceeecccccEEEEEEEE----eCCCEEEEEEeecC----CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCee
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL----HNDDWVAIKRFRYR----DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~ 395 (692)
+|+..+.||+|+||+||+++. .+++.||+|.++.. .....+.+.+|+.++.++ +|+||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999875 35788999999743 223456788999999999 499999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999764 458999999999999999999999 49999999999999999999999999999864
Q ss_pred CCCCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 476 MTESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 476 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
............||+.|+|||++.+. .++.++||||||+++|||++|+.||........ ...+...+.+.
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~~~~~~~~~------ 226 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT---QSEVSRRILKC------ 226 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC---HHHHHHHHhcC------
Confidence 33333333345799999999998765 478899999999999999999999964332211 11222222211
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
++.+. ......+.+++.+||+.||++||++... ..+++..++|...
T Consensus 227 ~~~~~-------~~~~~~~~~li~~~l~~dp~~R~~~~~~--~~~~~l~h~~~~~ 272 (332)
T cd05614 227 DPPFP-------SFIGPEAQDLLHKLLRKDPKKRLGAGPQ--GASEIKEHPFFKG 272 (332)
T ss_pred CCCCC-------CCCCHHHHHHHHHHcCCCHHHcCCCCCC--CHHHHHcCCCcCC
Confidence 11111 1223467899999999999999943311 1233336677654
No 69
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-38 Score=330.80 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=207.2
Q ss_pred ccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
+.|...+.||+|+||.||+|+..+ ++.||||.++..... ..+.|.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778899999999999998643 478999999765444 4678999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcc------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 397 LVYEFMPNGTLCQHLQRER------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||+ ++++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999997542 1348899999999999999999998 499999999999999999999
Q ss_pred EEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHH
Q 005536 465 KVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAI 542 (692)
Q Consensus 465 kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~ 542 (692)
||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------~~~ 234 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------EVI 234 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHH
Confidence 9999999975322211 12233456789999999999999999999999999999999 99888543221 122
Q ss_pred HHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 543 DRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+.+..+...... ......+.+++.+||+.+|++||++.||+++|++
T Consensus 235 ~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 235 ECITQGRLLQRP------------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHcCCcCCCC------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 333333322111 1233578899999999999999999999998863
No 70
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.3e-38 Score=331.74 Aligned_cols=258 Identities=24% Similarity=0.347 Sum_probs=204.9
Q ss_pred HhhccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG 393 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~ 393 (692)
..+++|+..+.||+|+||.||+|... .+..||||+++... .....+|.+|+.+++.++|+||+++++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999998753 24579999986432 234567899999999999999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceE
Q 005536 394 EPILVYEFMPNGTLCQHLQRERG--------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSK 465 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~--------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~k 465 (692)
..++||||+++++|.+++..... ..+++..++.++.|++.||+|||+ ++++||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEE
Confidence 99999999999999999976431 236888999999999999999999 4999999999999999999999
Q ss_pred EeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHH
Q 005536 466 VADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 466 l~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~ 543 (692)
|+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |..|+..... ....+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-------~~~~~ 232 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-------EQVLR 232 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHH
Confidence 999999875332221 11223356788999999998899999999999999999999 6777753321 11222
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.+..+...+. +......+.+++.+||+.+|++||++.|+++.|++
T Consensus 233 ~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLLDK------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcCCC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2222221111 11233578899999999999999999999998863
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.6e-38 Score=335.70 Aligned_cols=248 Identities=25% Similarity=0.337 Sum_probs=198.1
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||+||+++.. +++.||+|+++.. .......+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999865 4788999998753 234566788999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... ........
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~ 154 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFC 154 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCcccccc
Confidence 9999764 458999999999999999999999 49999999999999999999999999999853222 22234457
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. ....+..+... .+.
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~-~~~~~~~~~~~-------------~~~ 214 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NE-MYRKILQEPLR-------------FPD 214 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HH-HHHHHHcCCCC-------------CCC
Confidence 99999999999999999999999999999999999999863321 11 12222222110 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
....++.+++.+||+.+|++||++..+.+ +..++|...
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e----~l~hp~~~~ 252 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQE----IKNHPFFSQ 252 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHH----HHcCCCcCC
Confidence 23356789999999999999986544332 335566543
No 72
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.1e-37 Score=333.05 Aligned_cols=261 Identities=24% Similarity=0.346 Sum_probs=206.2
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 4688999999854 234456788999999988 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTS 154 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCcee
Confidence 9999988754 459999999999999999999999 49999999999999999999999999998752221 12223
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||++||||++|+.||+...............+.+......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------- 221 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR------------- 221 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC-------------
Confidence 4579999999999999999999999999999999999999997543333323333333333322111
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.+......+.+++.+||+.||++||++.+. ..++++..++|...+
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~-~~~~~i~~h~~f~~~ 266 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQ-TGFSDIKSHTFFRSI 266 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCC-CCHHHHHcCCCCCCC
Confidence 011123467899999999999999996542 234566778887644
No 73
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-37 Score=321.51 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=209.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||+|+.. +++.||||.++.. +......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999854 6889999988643 2344567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 400 EFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+|+||||+|||++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 2458899999999999999999998 4999999999999999999999999999876432
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.. .......|++.|+|||.+.+..++.++||||||+++|||++|+.|+...... . ....+.+.........
T Consensus 159 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~-~~~~~~~~~~~~~~~~--- 229 (267)
T cd08228 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----L-FSLCQKIEQCDYPPLP--- 229 (267)
T ss_pred hh-HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----H-HHHHHHHhcCCCCCCC---
Confidence 22 1123346889999999998888999999999999999999999998532211 1 1122223222111110
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.......+.+++.+||+.+|++||++.||++.|++++
T Consensus 230 --------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 230 --------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1123457899999999999999999999999999876
No 74
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.1e-38 Score=336.38 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=194.1
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHH-HHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIK-LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||+|.+.... .....++.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 57889999987532 223345556654 67889999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTS 154 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCccc
Confidence 9999888754 458888899999999999999998 49999999999999999999999999998753221 22234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+.+..+...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~------------- 214 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-------SQMYDNILHKPLQ------------- 214 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-------HHHHHHHhcCCCC-------------
Confidence 45689999999999988999999999999999999999999864321 1112222221110
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.+......+.+++.+||+.+|.+||+...- +.++..++|..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~---~~~~~~~~~~~ 255 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAKAD---FLEIKNHVFFS 255 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCCCC---HHHHhCCCCcC
Confidence 011223468899999999999999986422 23445666654
No 75
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.4e-38 Score=324.55 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=204.5
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
++|...++||+|+||.||++...++..+|+|.+.... ...+.|.+|+.++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688889999999999999998777789999886543 34567899999999999999999999875 456899999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++.......+++..++.++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++..........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 9999999987655568999999999999999999998 4999999999999999999999999999976432222222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++..|+|||++.+..++.++||||||+++|||++ |+.|+....+. .....+..+....
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~---------- 223 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-------EVLEQVERGYRMP---------- 223 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC----------
Confidence 23346778999999988899999999999999999999 88887632211 1122222221100
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.+......+.+++.+||+.+|++||++++|++.|+.
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 --CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111234578899999999999999999999999875
No 76
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.5e-38 Score=330.20 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=209.1
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEE
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCC 389 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~ 389 (692)
+++...++|+..+.||+|+||.||++...+ ...+|+|.++... .....++.+|++++.++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344455678889999999999999998643 3579999987542 33456789999999999 799999999999
Q ss_pred EeCCeeEEEEEeCCCCCHHHHHhhc--------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 005536 390 IEEGEPILVYEFMPNGTLCQHLQRE--------------RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSN 455 (692)
Q Consensus 390 ~~~~~~~lV~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~N 455 (692)
.+.+..+++|||+++|+|.++++.. ....+++..++.++.|++.||+|||+ ++|+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceee
Confidence 9999999999999999999999753 23458999999999999999999998 499999999999
Q ss_pred eEEcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcc
Q 005536 456 ILLDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHS 533 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~ 533 (692)
||+++++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..|+.....
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 240 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-- 240 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--
Confidence 9999999999999999986433221 11223345678999999988899999999999999999998 8888753221
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
....+.+..+...+ .+......+.+|+.+||+.+|++|||+.|+++.|+.+.
T Consensus 241 -----~~~~~~~~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 -----EELFKLLKEGYRME------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----HHHHHHHHcCCcCC------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11122222221111 11123457889999999999999999999999999864
No 77
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-38 Score=337.14 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=200.3
Q ss_pred eeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
++||+|+||.||+|+..+ ++.||||.++.. .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 369999999999998654 789999999753 234456788899999876 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTT 154 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cccc
Confidence 9999998764 4589999999999999999999994 99999999999999999999999999987532222 2234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+.. ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-------~~~~~~i~~~~~---~~p-------- 216 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-------DDLFESILHDDV---LYP-------- 216 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCC---CCC--------
Confidence 45699999999999998999999999999999999999999974332 112222222211 001
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.....++.+|+.+||+.+|++||+..+.....+++..++|...
T Consensus 217 --~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 217 --VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 1123567899999999999999954433333444456777654
No 78
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-37 Score=333.94 Aligned_cols=200 Identities=26% Similarity=0.398 Sum_probs=175.3
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.++|+..++||+|+||.||+++.. ++..+|+|.++... ....+++.+|++++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999875 47789999887542 3345679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++... ..+++.....++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 99999999999764 3589999999999999999999973 47999999999999999999999999998753221
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFS 529 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~ 529 (692)
......||..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 123456899999999999889999999999999999999999998643
No 79
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-37 Score=332.50 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=197.6
Q ss_pred eeecccccEEEEEEEE----eCCCEEEEEEeecC----CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKL----HNDDWVAIKRFRYR----DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++||+|+||.||+++. .+++.||||.++.. .......+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 34788999999753 223345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 155 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-T 155 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-C
Confidence 9999999999764 457888899999999999999999 499999999999999999999999999987532222 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+... +
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-------~~~~~~~~~~~~~------~--- 219 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-------KKTIDKILKGKLN------L--- 219 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCC------C---
Confidence 22345799999999999988899999999999999999999999864322 1122333332211 0
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhhhcccccc
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRP-----TMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl~~L~~i~~~~~~~~ 609 (692)
+......+.+++.+||+.+|++|| ++.+++ .++|...
T Consensus 220 ----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~-------~h~~~~~ 261 (323)
T cd05584 220 ----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQ-------SHPFFRH 261 (323)
T ss_pred ----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHh-------cCCCcCC
Confidence 111234678999999999999999 555554 5666543
No 80
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.2e-38 Score=326.27 Aligned_cols=267 Identities=23% Similarity=0.345 Sum_probs=202.2
Q ss_pred CccceeecccccEEEEEEEE-----eCCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPIL 397 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~l 397 (692)
|...+.||+|+||+||++.. .+++.||+|.++.... ...+.|.+|++++++++||||+++++++.+. ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988653 3567899999976532 3457789999999999999999999998764 35789
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||+++++|.+++... .+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999753 49999999999999999999999 4999999999999999999999999999986433
Q ss_pred CCCc--ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSH--ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.... ......++..|+|||.+....++.++||||||+++|||++|+.|+........ ................+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhh
Confidence 2211 11223456779999999888999999999999999999999998754321100 00000000000001111111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.... ...+.....++.+++.+||+.+|++|||+++|+++|+++.
T Consensus 239 ~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMR---LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCC---CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111 0111234468899999999999999999999999999874
No 81
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.1e-38 Score=339.04 Aligned_cols=254 Identities=28% Similarity=0.394 Sum_probs=205.2
Q ss_pred hhccCccceeecccccEEEEEEEEeCC--CEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHND--DWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~--~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
..++|+..+.||+|+||.||+|+..+. ..||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 345688899999999999999986543 58999998643 2344567889999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 108 lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999999764 458999999999999999999999 499999999999999999999999999997632
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....+ ....+.+.++... +.
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~--~p- 248 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-------LLIYQKILEGIIY--FP- 248 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-------HHHHHHHhcCCCC--CC-
Confidence 21 2345799999999999988899999999999999999999999974322 1122333332210 01
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhhhcccccccc
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRP-----TMMEVAEELEHIRVSSWASNIY 611 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl~~L~~i~~~~~~~~~~ 611 (692)
......+.+++.+||+.+|++|+ +++|+ ..++|..+..
T Consensus 249 ----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~-------~~hp~f~~~~ 291 (340)
T PTZ00426 249 ----------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV-------KEHPWFGNID 291 (340)
T ss_pred ----------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH-------HcCCCcCCCC
Confidence 11224578999999999999996 55554 4778876543
No 82
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=324.86 Aligned_cols=275 Identities=24% Similarity=0.359 Sum_probs=207.0
Q ss_pred CCCChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHH--hCCCCCeeeeEEEE
Q 005536 312 PFYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLS--SVSHPNLLRLLGCC 389 (692)
Q Consensus 312 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~--~l~H~niv~l~g~~ 389 (692)
.-.|+--...+.++....+.||+|.||.||+|+++ |+.||||++...+ .+.+.+|.+|.. .|+|+||+.+++.-
T Consensus 199 SGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 199 SGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred CCchhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 44555556667778888999999999999999985 6679999998543 345667777776 45999999999986
Q ss_pred EeC----CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceEEcC
Q 005536 390 IEE----GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAM-----NPPIYHRDIKSSNILLDY 460 (692)
Q Consensus 390 ~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~-----~~~iiHrDik~~NILld~ 460 (692)
..+ .+++||++|.++|+|+|||.+. .++....++++..+|.||+|||-+. +|.|.|||||+.|||+..
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk 351 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 351 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc
Confidence 543 3789999999999999999873 5999999999999999999999753 688999999999999999
Q ss_pred CCceEEeeecCCccCCCCCCcc---cccCCCCCCCCCccccccC----CC--CCccceeehhHHHHHHHhC---------
Q 005536 461 NYRSKVADFGLSRLGMTESSHI---STAPQGTPGYLDPQYHQYF----HL--SDKSDVYSFGVVLIEIITA--------- 522 (692)
Q Consensus 461 ~~~~kl~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~----~~--s~ksDV~SfGvll~eLltg--------- 522 (692)
++...|+|+|||.....+.... ....+||.+|||||++... .+ -..+||||||.|+||+..+
T Consensus 352 n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 352 NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 9999999999997644433222 3456799999999987543 11 2369999999999999863
Q ss_pred -CcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC-c-cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 523 -LKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD-A-WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 523 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~-~-~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
+.||..-.+ .+.+. +.+++- +..+.+.+..+ . .+.+.+..+.+|++.||..+|.-|.|+-.+-+.|.
T Consensus 432 y~~Pyyd~Vp-~DPs~-----eeMrkV----VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 432 YQLPYYDVVP-SDPSF-----EEMRKV----VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred hcCCcccCCC-CCCCH-----HHHhcc----eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 233322111 11111 111111 11112222111 1 13467788999999999999999999999999998
Q ss_pred hhhh
Q 005536 600 HIRV 603 (692)
Q Consensus 600 ~i~~ 603 (692)
++..
T Consensus 502 ~l~~ 505 (513)
T KOG2052|consen 502 KLSN 505 (513)
T ss_pred HHhc
Confidence 8864
No 83
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.7e-38 Score=327.34 Aligned_cols=264 Identities=25% Similarity=0.381 Sum_probs=203.7
Q ss_pred ccCccceeecccccEEEEEEEEe-----CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPI 396 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~ 396 (692)
+.|+..+.||+|+||+||++... ++..||+|+++.......++|.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46778889999999999999753 4778999999877666778899999999999999999999987543 4688
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997653 458999999999999999999998 499999999999999999999999999998643
Q ss_pred CCCCc--ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc----
Q 005536 477 TESSH--ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV---- 550 (692)
Q Consensus 477 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 550 (692)
..... ......++..|+|||++.+..++.++||||||+++|||++|..++..... .+.+.+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 231 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA--------EFMRMMGNDKQGQMI 231 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch--------hhhhhcccccccccc
Confidence 32221 11122344569999999988999999999999999999998766532110 01111111100
Q ss_pred ----cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 551 ----DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 551 ----~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.+++.... ..........++.+|+.+||+.+|++||||.||+++|+.++
T Consensus 232 ~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 232 VYHLIELLKNNG---RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hHHHHHHHhcCC---cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00000000 00011123457899999999999999999999999999874
No 84
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.2e-38 Score=324.43 Aligned_cols=257 Identities=27% Similarity=0.417 Sum_probs=210.2
Q ss_pred HhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
...++|...++||+|+||+||++...+++.||||.+... ....+++.+|+.++++++|+||+++++++.+....++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 345788999999999999999999888888999998754 3445789999999999999999999999998899999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++....+..+++..++.++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 9999999999987655679999999999999999999998 4999999999999999999999999999876433222
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....+.+..+....
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-------~~~~~~~~~~~~~~------- 224 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-------REVLEQVERGYRMP------- 224 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCC-------
Confidence 22223335678999999998899999999999999999999 8888853221 11222222221100
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.+.....++.+++.+||+.+|++||+++++.+.|+.
T Consensus 225 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 -----RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001123578899999999999999999999999875
No 85
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-37 Score=317.46 Aligned_cols=249 Identities=27% Similarity=0.422 Sum_probs=206.3
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|++|.||+++.. +++.|++|.+... .....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999865 5789999998754 345677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..++.++.|++.||.|||+ .+|+|+||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~ 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-N 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-c
Confidence 999999999987655679999999999999999999998 599999999999999999999999999987643322 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.++....+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~-------- 221 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-------GALILKIIRGVFPPV-------- 221 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCC--------
Confidence 22344688999999999998999999999999999999999999864331 112223332222111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||++.++++
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 222 ----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ----ccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1123357899999999999999999999985
No 86
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.2e-37 Score=318.59 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=210.7
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||+|... +++.||+|.++.. +....+++.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999976 7889999988643 2334678999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 400 EFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||+++++|.+++... ....+++..++.++.+++.||+|||+ .+|+||||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998653 23458999999999999999999999 4999999999999999999999999999875332
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.. .......+++.|+|||++.+..++.++||||||+++|||++|+.|+.... ..... ..+.+..+....+..
T Consensus 159 ~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~-~~~~~~~~~~~~~~~-- 230 (267)
T cd08224 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYS-LCKKIEKCDYPPLPA-- 230 (267)
T ss_pred CC-cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHH-HHhhhhcCCCCCCCh--
Confidence 21 12233468899999999988889999999999999999999999985332 11111 122222222111110
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
......+.+++.+||..+|++||++.+|+++|++++
T Consensus 231 ---------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 231 ---------DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---------hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 123457889999999999999999999999999875
No 87
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.3e-38 Score=336.93 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=205.9
Q ss_pred hhccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC-
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE- 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~- 392 (692)
..++|+..+.||+|+||.||+|... .++.||+|+++... ....+.+.+|+.++.++ +|+||+++++++...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457888999999999999999642 24689999987543 33456788999999999 899999999988754
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccC--------------------------------------------------------
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERG-------------------------------------------------------- 416 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~-------------------------------------------------------- 416 (692)
...+++|||+++++|.+++.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 568899999999999999864321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc-cccCCCCCCC
Q 005536 417 ---SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAPQGTPGY 492 (692)
Q Consensus 417 ---~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~Y 492 (692)
..++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 258999999999999999999998 499999999999999999999999999998643322222 2234567889
Q ss_pred CCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHH
Q 005536 493 LDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIH 571 (692)
Q Consensus 493 ~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~ 571 (692)
+|||++.+..++.++|||||||+||||++ |+.||......+ .....+..+..... +.....
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~------------~~~~~~ 303 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRMRA------------PEYATP 303 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCCCC------------CccCCH
Confidence 99999999999999999999999999998 988886432211 12222332211110 012235
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 572 NVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 572 ~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
++.+++.+||+.+|++||++.||++.|+++..
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 78899999999999999999999999998754
No 88
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.6e-38 Score=352.81 Aligned_cols=250 Identities=20% Similarity=0.266 Sum_probs=203.3
Q ss_pred cCccceeecccccEEEEEEEEeC--CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN--DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.|...+.||+|+||.||++.... ++.||+|.+...+......+.+|+.+++.++||||+++++++.+.+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 48889999999999999997543 5678888876665556667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 403 PNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 403 ~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
++|+|.++|... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988653 23458899999999999999999999 4999999999999999999999999999986432211
Q ss_pred -cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 -HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 -~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..+.....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------~~~~~~~~~~~~~~~------ 291 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------REIMQQVLYGKYDPF------ 291 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCC------
Confidence 223445699999999999999999999999999999999999999863221 112222222222111
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+.....++.+|+.+||+.+|++||++.++++
T Consensus 292 ------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 ------PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1122356889999999999999999999864
No 89
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.9e-37 Score=331.71 Aligned_cols=258 Identities=22% Similarity=0.249 Sum_probs=205.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||+|+++... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999864 57899999998542 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999997652 459999999999999999999999 499999999999999999999999999998644333
Q ss_pred CcccccCCCCCCCCCccccc------cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC-cccc
Q 005536 480 SHISTAPQGTPGYLDPQYHQ------YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG-CVDE 552 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~------~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~e 552 (692)
........||+.|+|||++. ...++.++||||||+++|||++|+.||...... .. ...+... ....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~-~~~i~~~~~~~~ 229 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KT-YNNIMNFQRFLK 229 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HH-HHHHHcCCCccC
Confidence 33334457999999999986 456788999999999999999999998643321 11 1222111 1111
Q ss_pred cccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 553 i~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
..+ .......+.+|+.+||+ +|++||++.+++ .++|....
T Consensus 230 ~~~----------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~-------~h~~~~~~ 269 (330)
T cd05601 230 FPE----------DPKVSSDFLDLIQSLLC-GQKERLGYEGLC-------CHPFFSKI 269 (330)
T ss_pred CCC----------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHh-------CCCCcCCC
Confidence 000 01223567889999998 999999987765 67776543
No 90
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.8e-38 Score=341.07 Aligned_cols=268 Identities=22% Similarity=0.244 Sum_probs=201.6
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|+..++||+|+||.||++... .++.||+|... .+.+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999854 57889999753 24578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+ .++|.+++... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 165 ~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 165 Y-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred C-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 9 47898888654 4589999999999999999999994 9999999999999999999999999999753322222
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCccc----ccHHHHHHHHhccCc--------
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSE----VNLAALAIDRIGRGC-------- 549 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~-------- 549 (692)
......||+.|+|||++.+..++.++||||||+++|||++|+.|+........ ...............
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 33445799999999999998999999999999999999999987643221110 001111111111000
Q ss_pred --ccccc-----cccCC-cCCCcc--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 550 --VDEII-----DPYLE-PHRDAW--TLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 550 --~~ei~-----d~~l~-~~~~~~--~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
..++. ..... .....+ ......++.+|+.+||+.||.+|||++|++ .++|...
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL-------~hp~f~~ 381 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL-------DFAAFQD 381 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh-------cChhhcc
Confidence 00000 00000 000001 012345788999999999999999999988 4677653
No 91
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4e-37 Score=335.80 Aligned_cols=257 Identities=23% Similarity=0.308 Sum_probs=198.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.|...+.||+|+||+||+++.. +++.||||+++... ....+.+.+|++++.+++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999854 47899999997542 3445678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999764 358899999999999999999999 4999999999999999999999999999753210000
Q ss_pred ----------------------------------------------cccccCCCCCCCCCccccccCCCCCccceeehhH
Q 005536 481 ----------------------------------------------HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGV 514 (692)
Q Consensus 481 ----------------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGv 514 (692)
.......||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0012346999999999999889999999999999
Q ss_pred HHHHHHhCCcccCCCCCcccccHHHHHHHHhccC-cccccccccCCcCCCccCHHHHHHHHHHHHHh--cccCCCCCCCH
Q 005536 515 VLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG-CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRC--LAFHRDMRPTM 591 (692)
Q Consensus 515 ll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~C--l~~~p~~RPsm 591 (692)
++|||++|+.||....+... ...+... ....+ +.. .....++.+|+.++ +..++..||++
T Consensus 237 il~elltG~~Pf~~~~~~~~-------~~~i~~~~~~~~~------~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTET-------QLKVINWENTLHI------PPQ----VKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHH-------HHHHHccccccCC------CCC----CCCCHHHHHHHHHHccCcccccCCCCH
Confidence 99999999999974432111 1111110 00000 000 01234677888884 45566669998
Q ss_pred HHHHHHHHhhhhccccccc
Q 005536 592 MEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 592 ~eVl~~L~~i~~~~~~~~~ 610 (692)
.|++ .++|....
T Consensus 300 ~~~l-------~hp~f~~~ 311 (381)
T cd05626 300 DDIK-------AHPFFSEV 311 (381)
T ss_pred HHHh-------cCcccCCC
Confidence 8886 56776543
No 92
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.4e-38 Score=323.64 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=202.2
Q ss_pred CccceeecccccEEEEEEEEeC----CCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe-----
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE----- 394 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~----- 394 (692)
|...+.||+|+||.||+|++.. +..||||+++... ....+++.+|+++++.++|+||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998653 3579999987542 3446789999999999999999999999876554
Q ss_pred -eEEEEEeCCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 395 -PILVYEFMPNGTLCQHLQRER----GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 395 -~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
.++|+||+++|+|.+++.... ...+++...+.++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 799999999999999986542 2358999999999999999999999 49999999999999999999999999
Q ss_pred cCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhcc
Q 005536 470 GLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 470 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
|+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..|+...... ...+.+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-------~~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-------EIYDYLRH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHc
Confidence 999864332221 1122345678999999988899999999999999999999 88887533211 12233333
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+..... +.....++.+++.+||+.+|++||++.||++.|+++
T Consensus 231 ~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRLKQ------------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCC------------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 221111 112345789999999999999999999999999875
No 93
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-37 Score=328.11 Aligned_cols=272 Identities=24% Similarity=0.318 Sum_probs=202.4
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.++|+..++||+|+||+||+|+.. +++.||||+++.... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467899999999999999999965 578999999875432 234567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++ ++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... .
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-S 157 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC-C
Confidence 994 7888888754 3458899999999999999999999 49999999999999999999999999998753221 2
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc-------
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE------- 552 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e------- 552 (692)
.......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......+ ........+.......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhCCCChhhccchhhc
Confidence 22234568999999998765 4588899999999999999999999974322111 1111111111100000
Q ss_pred -cccccCCcCCCccC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 553 -IIDPYLEPHRDAWT-------LSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 553 -i~d~~l~~~~~~~~-------~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
..++.......... ......+.+|+.+||+.||++|||++|++ .++|...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l-------~h~~f~~ 293 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL-------SHEYFSD 293 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh-------cCccccc
Confidence 00000000000000 01124678999999999999999998887 5677653
No 94
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.2e-38 Score=327.59 Aligned_cols=255 Identities=25% Similarity=0.369 Sum_probs=203.5
Q ss_pred ccCccceeecccccEEEEEEEE-----eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+.|+..++||+|+||+||+|+. .++..|++|.++... .....+|.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4567788999999999999985 245789999997543 3345789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcc---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 398 VYEFMPNGTLCQHLQRER---------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
||||+++++|.+++.... ...+++...+.++.|++.||+|||+ ++|+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence 999999999999986432 1247899999999999999999999 4999999999999999999
Q ss_pred ceEEeeecCCccCCCC-CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHH
Q 005536 463 RSKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 463 ~~kl~DFGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~ 540 (692)
.+||+|||+++..... .........++..|+|||++.+..++.++||||||+++|||++ |..||....+ ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-------~~ 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-------QE 234 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------HH
Confidence 9999999999753322 1122233446778999999988889999999999999999998 8888753221 11
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
..+.+..+.... .+.....++.+++.+||+.+|.+||++.+|+++|+.
T Consensus 235 ~~~~~~~~~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMVRKRQLLP------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCcCC------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 223333222111 011223578899999999999999999999998864
No 95
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=345.60 Aligned_cols=266 Identities=22% Similarity=0.330 Sum_probs=215.8
Q ss_pred HHhhccCccceeecccccEEEEEEEEeCC-CEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEE-EEe-----
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHND-DWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGC-CIE----- 391 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~-~~~----- 391 (692)
+....++++.+.|.+|||+.||.+....+ ..||+|++-..++...+...+|+++|++|+ |+|||.+++. ...
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34456677889999999999999998776 999999999888899999999999999997 9999999993 321
Q ss_pred -CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 392 -EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 392 -~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
.-+.+|.||||++|.|-|+|.......|++.++++|+.++++|+++||.. .++|||||||-+||||+.++..||+|||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 13688999999999999999876556699999999999999999999984 6889999999999999999999999999
Q ss_pred CCccCCCCC--Ccc------cccCCCCCCCCCcccc---ccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH
Q 005536 471 LSRLGMTES--SHI------STAPQGTPGYLDPQYH---QYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA 539 (692)
Q Consensus 471 la~~~~~~~--~~~------~~~~~gt~~Y~aPE~~---~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~ 539 (692)
.+.-..... ... .-...-|+-|.+||.+ .+..+++|+|||+|||+||-|.....||+......
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la------ 265 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA------ 265 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee------
Confidence 986422111 110 0112369999999964 67789999999999999999999999998543221
Q ss_pred HHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc-cccc
Q 005536 540 LAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS-SWAS 608 (692)
Q Consensus 540 ~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~-~~~~ 608 (692)
|++-... ... .....+.+.+||..||+.||++||++.+|++.+-+|+.. .|.+
T Consensus 266 -------------Ilng~Y~--~P~-~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~ 319 (738)
T KOG1989|consen 266 -------------ILNGNYS--FPP-FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP 319 (738)
T ss_pred -------------EEecccc--CCC-CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence 1111111 011 135677899999999999999999999999999988754 3443
No 96
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.7e-37 Score=318.65 Aligned_cols=256 Identities=23% Similarity=0.394 Sum_probs=208.5
Q ss_pred hhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+.|+..++||+|+||.||++...++..+++|.++.. ....+.|.+|++++++++|+||+++.+.+.+ ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 45678899999999999999999877888999988754 3456789999999999999999999999887 778999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 999999999987655678999999999999999999998 49999999999999999999999999998754332222
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
......++..|+|||++....++.++||||||+++|||++ |+.||..... ......+..+...+.
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~------- 224 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERGYRMPR------- 224 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHhCCCCCCC-------
Confidence 2233456778999999998889999999999999999999 8888853221 112223332211111
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
......++.+++.+||+.+|++||++.++.+.|+.+
T Consensus 225 -----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 225 -----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred -----cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 012335688999999999999999999999999753
No 97
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.2e-38 Score=326.91 Aligned_cols=256 Identities=22% Similarity=0.249 Sum_probs=202.5
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||+||+++.. +++.||+|.+.... ....+.+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999864 58899999986432 22344566799999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++.......+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++...... .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccC
Confidence 999876655569999999999999999999999 59999999999999999999999999998753322 2223456
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
|+..|+|||++.+..++.++|||||||++|||++|+.||...... ... ............. . ...
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~-~~~~~~~~~~~~~----~----~~~---- 220 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAK-EELKRRTLEDEVK----F----EHQ---- 220 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhH-HHHHHHhhccccc----c----ccc----
Confidence 899999999999888999999999999999999999998643221 111 1111111111110 0 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
....++.+|+.+||+.+|++||+++|++ +++..++|....
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~---~~~~~h~~f~~~ 260 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKN---DDPRKHEFFKTI 260 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccch---hhhhcChhhcCC
Confidence 1234678999999999999999998875 666678887654
No 98
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.4e-37 Score=330.75 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=201.8
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||+|.++.. .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 4788999999854 234456688899998877 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCccc
Confidence 9999988754 458999999999999999999999 49999999999999999999999999999753221 12223
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcc--cccHHHHHHHHhccCcccccccccCCcCC
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHS--EVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||+...... ......+..+.+..+...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----------- 223 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----------- 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC-----------
Confidence 4578999999999999999999999999999999999999996422211 111222233333222111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.+.....++.+|+.+||+.||++||+.... ..++++..++|....
T Consensus 224 --~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~-~~~~~i~~hp~f~~~ 268 (329)
T cd05618 224 --IPRSLSVKAASVLKSFLNKDPKERLGCHPQ-TGFADIQGHPFFRNV 268 (329)
T ss_pred --CCCCCCHHHHHHHHHHhcCCHHHcCCCCCC-CCHHHHhcCCCCCCC
Confidence 111223467899999999999999984211 112344567777543
No 99
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-37 Score=335.69 Aligned_cols=258 Identities=25% Similarity=0.330 Sum_probs=206.8
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|...+.||+|+||+||+++.. +++.||||+++... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999965 58899999997542 245667899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999865 458999999999999999999999 599999999999999999999999999997643322
Q ss_pred ----------------------------CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCC
Q 005536 480 ----------------------------SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRP 531 (692)
Q Consensus 480 ----------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~ 531 (692)
........||+.|+|||++.+..++.++|||||||+||||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 1122345699999999999999999999999999999999999999874432
Q ss_pred cccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHhhhhccccccc
Q 005536 532 HSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPT-MMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs-m~eVl~~L~~i~~~~~~~~~ 610 (692)
. .....+.... ....-+ ... ....++.+|+.+||+ +|.+||+ ++|++ .++|....
T Consensus 236 ~-------~~~~~i~~~~-~~~~~p----~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll-------~hp~~~~~ 291 (350)
T cd05573 236 Q-------ETYNKIINWK-ESLRFP----PDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIK-------SHPFFKGI 291 (350)
T ss_pred H-------HHHHHHhccC-CcccCC----CCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHh-------cCCCcCCC
Confidence 1 1112222100 000000 000 123568899999998 9999999 88887 45665543
No 100
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.5e-38 Score=336.43 Aligned_cols=273 Identities=22% Similarity=0.339 Sum_probs=200.2
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----eeE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----EPI 396 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~~~ 396 (692)
+|+..++||+|+||.||+|+.. +++.||||+++.. ......++.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999854 5789999998743 2334567899999999999999999999986432 479
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||+. ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999994 7899988754 458999999999999999999999 499999999999999999999999999997533
Q ss_pred CCCC--cccccCCCCCCCCCcccccc--CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH--------HHHHH
Q 005536 477 TESS--HISTAPQGTPGYLDPQYHQY--FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA--------LAIDR 544 (692)
Q Consensus 477 ~~~~--~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~--------~~~~~ 544 (692)
.... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||............. .....
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 2211 12234579999999999865 578999999999999999999999986433211110000 00111
Q ss_pred hccCcccccccccCCcC---CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 545 IGRGCVDEIIDPYLEPH---RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 545 ~~~~~~~ei~d~~l~~~---~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
+......+.+....... ...........+.+++.+||+.+|++||+++|++ .++|....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l-------~hp~f~~~ 296 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL-------ADPYFKGL 296 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh-------cCchhhhc
Confidence 11111111110000000 0000001234678999999999999999999887 56776543
No 101
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.5e-37 Score=318.17 Aligned_cols=247 Identities=26% Similarity=0.424 Sum_probs=200.2
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHH
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLC 408 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~ 408 (692)
++||+|+||.||+|...+++.||+|.++.... .....|.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36999999999999988889999999876533 33457899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCC
Q 005536 409 QHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG 488 (692)
Q Consensus 409 ~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~g 488 (692)
+++.... ..+++..++.++.|++.||.|||+ ++++||||||+||++++++.+||+|||+++..............+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9987643 458999999999999999999998 599999999999999999999999999987532222222223345
Q ss_pred CCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 489 TPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 489 t~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
+..|+|||++.+..++.++||||||+++|||++ |..||...... .....+..+..... +.
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~------------~~ 217 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-------QAREQVEKGYRMSC------------PQ 217 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHHcCCCCCC------------CC
Confidence 678999999998899999999999999999998 88888533211 11222222211110 11
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.....+.+++.+||+.+|++||++.|++++|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23457899999999999999999999999875
No 102
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-37 Score=324.36 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=201.7
Q ss_pred cCccceeecccccEEEEEEEEe-CCC----EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDD----WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.|+..+.||+|+||+||+|++. +++ .+++|.+.... ....+++..|+.++++++||||+++++++. ....+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 4666789999999999999864 344 47788875432 234567888999999999999999999875 4557899
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+||+++|+|.+++.... ..++|..++.|+.|++.||+|||+ ++++||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999997653 468999999999999999999998 59999999999999999999999999999864332
Q ss_pred CC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 479 SS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 479 ~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.. .......++..|++||++.+..++.++||||||+++|||++ |+.|+....+. ...+.+.++.... .+
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~ 233 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLEKGERLA--QP 233 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcCC--CC
Confidence 21 22234557789999999998899999999999999999998 98888643221 1122223222111 11
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
. .....+.+++.+||..+|.+|||+.|+++.|+.+...
T Consensus 234 ~----------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 234 Q----------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred C----------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 1 1224578899999999999999999999999997653
No 103
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-37 Score=320.33 Aligned_cols=251 Identities=24% Similarity=0.391 Sum_probs=206.9
Q ss_pred hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.++|+..+.||+|+||.||++... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356788899999999999999864 78899999976543 5678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 99999999987655579999999999999999999999 499999999999999999999999999998642211
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....+..|+|||++....++.++||||||+++|||++ |+.|+..... ......+.++...+.
T Consensus 157 -~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~-------- 220 (256)
T cd05039 157 -DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------KDVVPHVEKGYRMEA-------- 220 (256)
T ss_pred -ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHhcCCCCCC--------
Confidence 13345678999999988899999999999999999997 8888753321 112222222211111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+...+..+.+++.+||+.+|++||++.|++++|+.+
T Consensus 221 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 ----PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 112235788999999999999999999999999764
No 104
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.7e-38 Score=334.96 Aligned_cols=255 Identities=24% Similarity=0.365 Sum_probs=204.2
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 4789999999753 234556788899999877 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTS 154 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCccc
Confidence 9999998764 458999999999999999999999 49999999999999999999999999998753222 22234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~---~~-------- 216 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-------DDLFEAILNDEVV---YP-------- 216 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcCCCC---CC--------
Confidence 45799999999999998999999999999999999999999974322 1122233222110 00
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIY 611 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~~ 611 (692)
.....++.+++.+||+.||++||++.++ ...+++..++|.....
T Consensus 217 --~~~~~~~~~li~~~L~~dP~~R~~~~~~-~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 217 --TWLSQDAVDILKAFMTKNPTMRLGSLTL-GGEEAILRHPFFKELD 260 (320)
T ss_pred --CCCCHHHHHHHHHHcccCHHHCCCCCCC-CCHHHHHcCCCcCCCC
Confidence 1123567899999999999999998663 3456667888876543
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-37 Score=331.94 Aligned_cols=251 Identities=28% Similarity=0.372 Sum_probs=197.0
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHH-HHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIK-LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||||++.... .....++.+|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999965 58899999997532 223345556655 56789999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTS 154 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCccc
Confidence 9999999764 458999999999999999999999 4999999999999999999999999999875322 122234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+... +.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~------~~----- 216 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-------AEMYDNILNKPLR------LK----- 216 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCC------CC-----
Confidence 45699999999999999999999999999999999999999864321 1112222222110 11
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
......+.+++.+||+.+|.+||++.+ .++++..++|...
T Consensus 217 --~~~~~~~~~li~~~l~~~p~~R~~~~~---~~~~il~~~~~~~ 256 (323)
T cd05575 217 --PNISVSARHLLEGLLQKDRTKRLGAKD---DFLEIKNHVFFSS 256 (323)
T ss_pred --CCCCHHHHHHHHHHhhcCHHhCCCCCC---CHHHHHcCCCcCC
Confidence 112356889999999999999999863 3344456777653
No 106
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.9e-38 Score=328.69 Aligned_cols=257 Identities=26% Similarity=0.366 Sum_probs=203.5
Q ss_pred ccCccceeecccccEEEEEEEEeC-C--CEEEEEEeecC-CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-D--DWVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV 398 (692)
++|+..+.||+|+||.||+|...+ + ..+++|.++.. .....+.|.+|++++.++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998754 3 24788888743 334556799999999999 799999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 399 YEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
+||+++++|.+++.... ...+++..++.|+.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999997542 1248899999999999999999998 599999999999999999999
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHH
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~ 543 (692)
||+|||++..... .........+..|+|||++.+..++.++||||||+++|||++ |..||...... ...+
T Consensus 159 kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-------~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEV--YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-------ELYE 229 (297)
T ss_pred EECCcCCCccccc--eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHH
Confidence 9999999864211 111112233567999999998899999999999999999998 98888643221 1122
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+..+...+ .+......+.+|+.+||+.+|.+||++.+++++|+.+...
T Consensus 230 ~~~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 230 KLPQGYRME------------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHhcCCCCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 222221110 0112335688999999999999999999999999987653
No 107
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.8e-37 Score=330.75 Aligned_cols=261 Identities=23% Similarity=0.252 Sum_probs=200.2
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..++||+|+||+||+++... ++.||+|.+... .....+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 468889999999999999998754 678999998642 2233456889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997642 458999999999999999999999 499999999999999999999999999987543333
Q ss_pred CcccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 480 SHISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
........||+.|+|||++. ...++.++|||||||++|||++|+.||..... .. ....+........+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~-~~~~i~~~~~~~~~ 229 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VE-TYGKIMNHKERFQF 229 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HH-HHHHHhCCCccccC
Confidence 33334457999999999986 34688999999999999999999999864321 11 12222211100000
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhhhhccccccc
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDM--RPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~--RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
. ........++.+|+.+|+..++++ |+++.|++ .++|..+.
T Consensus 230 p--------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~-------~h~~f~~~ 272 (332)
T cd05623 230 P--------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFK-------QHPFFTGI 272 (332)
T ss_pred C--------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHh-------CCCCcCCC
Confidence 0 001123456788999988654444 67876665 66666544
No 108
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-37 Score=336.69 Aligned_cols=260 Identities=20% Similarity=0.238 Sum_probs=203.7
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
...++|+..++||+|+||+||+++.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34578999999999999999999865 4789999999643 2234456789999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||+++|+|.+++... .++...+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999998653 47888889999999999999999 499999999999999999999999999997643
Q ss_pred CCCCcccccCCCCCCCCCccccccC----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYF----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE 552 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 552 (692)
...........||+.|+|||++.+. .++.++|||||||+||||++|+.||...... . ....+..+.. .
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~-~~~~i~~~~~-~ 265 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------G-TYSKIMDHKN-S 265 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------H-HHHHHHcCCC-c
Confidence 3222223445799999999988653 4788999999999999999999999743321 1 1222222110 0
Q ss_pred cccccCCcCCCccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhhhhcccccc
Q 005536 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDM--RPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 553 i~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~--RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
+..+ . ......++.+|+.+||+.+|++ ||++.|++ .++|...
T Consensus 266 ~~~~----~----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell-------~h~~~~~ 309 (370)
T cd05596 266 LTFP----D----DIEISKQAKDLICAFLTDREVRLGRNGVDEIK-------SHPFFKN 309 (370)
T ss_pred CCCC----C----cCCCCHHHHHHHHHHccChhhccCCCCHHHHh-------cCcccCC
Confidence 0000 0 0123357789999999999988 99988876 5566543
No 109
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-38 Score=336.49 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=211.7
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
-|...+.||.|+-|.|-.|+. ..|+.+|||++.+.. ........+|+.||+.+.||||+++++++++..++|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 356678899999999999985 569999999997652 2234557789999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++|-|+++|... ++|++.+..+.+.||+.|+.|+|.. +|+||||||+|+|||.++++||+|||+|.+- ...
T Consensus 93 yv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe--~~g 165 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE--VPG 165 (786)
T ss_pred ecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc--cCC
Confidence 99999999999875 4599999999999999999999996 9999999999999999999999999999862 233
Q ss_pred cccccCCCCCCCCCccccccCCCC-CccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLS-DKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s-~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......|.+.|.+||++.+.+|. .++||||.|||||.||||+.||+.++ ....+.++++|..+ +
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-------ir~LLlKV~~G~f~-M------ 231 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-------IRVLLLKVQRGVFE-M------ 231 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-------HHHHHHHHHcCccc-C------
Confidence 445667899999999999999886 58999999999999999999998322 23345666666432 1
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
+.....+..+|+.+||..||.+|.|++||+ +++|....
T Consensus 232 ------Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~-------kHP~l~g~ 269 (786)
T KOG0588|consen 232 ------PSNISSEAQDLLRRMLDVDPSTRITTEEIL-------KHPFLSGY 269 (786)
T ss_pred ------CCcCCHHHHHHHHHHhccCccccccHHHHh-------hCchhhcC
Confidence 123345788999999999999999988776 67776543
No 110
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.9e-37 Score=319.27 Aligned_cols=258 Identities=23% Similarity=0.349 Sum_probs=207.7
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||+++. .+++.++||.+.... ....+++.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677888999999999999985 578899999886532 334568899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 400 EFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987432 3458999999999999999999998 4999999999999999999999999999876432
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.. .......++..|+|||++.+..++.++||||||+++|||++|..|+...... . ....+.+..... +.
T Consensus 159 ~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~-~~~~~~~~~~~~-----~~ 227 (267)
T cd08229 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----L-YSLCKKIEQCDY-----PP 227 (267)
T ss_pred CC-cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----H-HHHhhhhhcCCC-----CC
Confidence 22 1223346889999999998888999999999999999999999998532211 0 111122221111 10
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+. .......+.+++.+||+.+|++||||.+|++.++++
T Consensus 228 ~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 LP------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CC------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 10 112345788999999999999999999999999876
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.8e-37 Score=324.78 Aligned_cols=261 Identities=20% Similarity=0.246 Sum_probs=204.1
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
+|+..+.||+|+||+||++... +++.||+|++.... ......+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999864 57899999997532 2234567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 9999999998876544569999999999999999999999 499999999999999999999999999997632221
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ........+..+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~----------- 221 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKEDQ----------- 221 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhhcc-----------
Confidence 1233468999999999998899999999999999999999999997433211 1111122222111
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
...+......+.+|+.+||+.||++||++.+ +..+++..++|..
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~--~~~~~l~~~~~~~ 265 (285)
T cd05605 222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRG--EGAEEVKAHPFFR 265 (285)
T ss_pred --cccCcccCHHHHHHHHHHccCCHHHhcCCCC--CCHHHHhcCcCcc
Confidence 0111123456889999999999999994332 1233344666654
No 112
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=343.60 Aligned_cols=251 Identities=28% Similarity=0.409 Sum_probs=206.9
Q ss_pred cceeecccccEEEEEEEE-eCC----CEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 328 EKHRLGTGAYGTVYAGKL-HND----DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..++||+|+||+||||.+ .++ -+||||.+... ..+..++|+.|+.+|.+|+|||+++|+|+|.... +.||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 356899999999999985 333 46899998755 3456789999999999999999999999998876 8899999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
|+.|+|.+|++.++ ..+.-+..+.|..|||+||.|||. ++++||||.++|||+..-..+||.|||++++...+...
T Consensus 779 mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred cccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999875 568889999999999999999998 59999999999999999999999999999986554433
Q ss_pred cc-ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 482 IS-TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 482 ~~-~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.. ....-.+.|||-|.+....|+.+||||||||++|||+| |.+|++.-... .+-+.++.
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-------eI~dlle~------------ 915 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-------EIPDLLEK------------ 915 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-------HhhHHHhc------------
Confidence 32 22334678999999999999999999999999999999 77777532211 11222222
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
+++-..+..+..++..++.+||..|++.||+++++..++.+..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 2233345567778999999999999999999999998887654
No 113
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-37 Score=321.87 Aligned_cols=256 Identities=24% Similarity=0.394 Sum_probs=205.8
Q ss_pred hccCccceeecccccEEEEEEEEeC-C---CEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-D---DWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
.++|+..+.||+|+||.||+|++.. + ..+++|.++... ....+++.+|++++++++|+|++++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 4578889999999999999998753 3 269999987542 3446789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 468999999999999999999998 4999999999999999999999999999875432
Q ss_pred CCCccc--ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 478 ESSHIS--TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 478 ~~~~~~--~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
...... .....+..|+|||++....++.++||||||+++|||++ |+.|+..... ......+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-------~~~~~~i~~~~~~--- 229 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-------HEVMKAINDGFRL--- 229 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------HHHHHHHhcCCCC---
Confidence 221111 12223567999999988889999999999999999998 9999853321 1122223222100
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+ .......++.+++.+||+.+|++||+|.+|++.|+++
T Consensus 230 -~--------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 -P--------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -C--------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 1112345789999999999999999999999999876
No 114
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.8e-37 Score=329.86 Aligned_cols=238 Identities=24% Similarity=0.350 Sum_probs=190.3
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||||.++.. .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999865 4778999999753 233455666777777654 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~ 154 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence 9999998764 358999999999999999999999 499999999999999999999999999997532222 2234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.... +.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~------~~~------ 215 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-------DELFDSILNDR------PHF------ 215 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCC------CCC------
Confidence 45799999999999988999999999999999999999999864321 11122222111 000
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMME 593 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~e 593 (692)
+.....++.+|+.+||+.+|++||++.+
T Consensus 216 -~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 216 -PRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 1112346789999999999999999753
No 115
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.8e-38 Score=334.28 Aligned_cols=255 Identities=24% Similarity=0.354 Sum_probs=198.8
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHH---HhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLL---SSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il---~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
|+..+.||+|+||.||++... +++.||||+++... ....+.+.+|++++ ++++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999864 57899999997542 23445666776665 566899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|..+++. ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988864 359999999999999999999999 49999999999999999999999999998753222
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+..+...
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-------~~~~~i~~~~~~------- 219 (324)
T cd05589 155 G-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-------EVFDSIVNDEVR------- 219 (324)
T ss_pred C-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC-------
Confidence 1 2223457999999999999989999999999999999999999998643221 112222222110
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+......+.+++.+||+.+|.+||++.+. .++++..++|...
T Consensus 220 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~--~~~~l~~~~~f~~ 262 (324)
T cd05589 220 ------YPRFLSREAISIMRRLLRRNPERRLGSGEK--DAEDVKKQPFFRD 262 (324)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCC--CHHHHhhCCCcCC
Confidence 011223567899999999999999965442 1334445666543
No 116
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-37 Score=325.69 Aligned_cols=255 Identities=25% Similarity=0.389 Sum_probs=204.7
Q ss_pred ccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
++|...++||+|+||.||++... ++..+++|.++.......+.|.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777889999999999999643 345799999887666667889999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 398 VYEFMPNGTLCQHLQRERG-------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
+|||+++++|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 9999999999999976432 348999999999999999999998 499999999999999999999
Q ss_pred EEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHH
Q 005536 465 KVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAI 542 (692)
Q Consensus 465 kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~ 542 (692)
||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~ 234 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-------AI 234 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-------HH
Confidence 9999999875332211 11223345788999999998999999999999999999998 888875322111 12
Q ss_pred HHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 543 DRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+.+..+...+. +......+.+|+.+||+.+|.+||++.||++.|++
T Consensus 235 ~~~~~~~~~~~------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 235 ECITQGRELER------------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHcCccCCC------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 22222211111 01223568899999999999999999999998863
No 117
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.6e-38 Score=335.51 Aligned_cols=252 Identities=23% Similarity=0.274 Sum_probs=200.5
Q ss_pred eeecccccEEEEEEEE----eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 330 HRLGTGAYGTVYAGKL----HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
+.||+|+||+||+++. .+++.||+|+++... ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 357899999997542 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... ....
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~ 155 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKA 155 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCce
Confidence 99999999754 458999999999999999999999 49999999999999999999999999999763322 1222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.+....
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-------~~~~~~i~~~~~~------------ 216 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-------KETMTMILKAKLG------------ 216 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-------HHHHHHHHcCCCC------------
Confidence 345789999999999988899999999999999999999999864321 1112222222110
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+......+.+|+.+||+.||++||++.+.. ++++..++|...
T Consensus 217 -~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~--~~~~~~~~~~~~ 259 (318)
T cd05582 217 -MPQFLSPEAQSLLRALFKRNPANRLGAGPDG--VEEIKRHPFFST 259 (318)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCC--HHHHhCCCCcCC
Confidence 0111235678999999999999999977632 344456666543
No 118
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-37 Score=328.45 Aligned_cols=256 Identities=27% Similarity=0.393 Sum_probs=202.2
Q ss_pred ccCccceeecccccEEEEEEEEeC-CC--EEEEEEeecC-CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DD--WVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV 398 (692)
++|+..+.||+|+||.||+|...+ +. .+++|.++.. .....++|.+|++++.++ +|+||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 467888999999999999998643 43 4678877643 234556889999999999 899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 399 YEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
|||+++++|.++++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 99999999999997542 1358899999999999999999998 599999999999999999999
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHH
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~ 543 (692)
||+|||+++... .........++..|+|||++.+..++.++||||||+++|||+| |..||...... ...+
T Consensus 164 kl~dfg~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~ 234 (303)
T cd05088 164 KIADFGLSRGQE--VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------ELYE 234 (303)
T ss_pred EeCccccCcccc--hhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-------HHHH
Confidence 999999986321 1111122234678999999988889999999999999999998 98888533211 1122
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
.+..+...+ .+......+.+|+.+||+.+|++||++.++++.|+++..
T Consensus 235 ~~~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 235 KLPQGYRLE------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHhcCCcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 222211100 011123468899999999999999999999999988754
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.7e-38 Score=352.04 Aligned_cols=258 Identities=23% Similarity=0.277 Sum_probs=207.0
Q ss_pred HHHHHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC
Q 005536 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG 393 (692)
Q Consensus 317 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~ 393 (692)
.+.+...++|...+.||+|+||+||+++. .+++.||||++... .......+.+|+.++..++|+|++++...+...+
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 44455668999999999999999999984 46899999998754 3345667889999999999999999988775432
Q ss_pred --------eeEEEEEeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 394 --------EPILVYEFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 394 --------~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
..++||||+++|+|.++|.... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCC
Confidence 3679999999999999997532 3468999999999999999999999 59999999999999999999
Q ss_pred eEEeeecCCccCCCC-CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHH
Q 005536 464 SKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI 542 (692)
Q Consensus 464 ~kl~DFGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~ 542 (692)
+||+|||+++..... .........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....
T Consensus 182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-------~~~~ 254 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-------EEVM 254 (496)
T ss_pred EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-------HHHH
Confidence 999999999864322 12223445799999999999999999999999999999999999999864321 1122
Q ss_pred HHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 543 DRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+..+.... .+.....++.+|+.+||+.+|++||++.++++
T Consensus 255 ~~~~~~~~~~------------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 255 HKTLAGRYDP------------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHHhcCCCCC------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 2232222211 11123457889999999999999999999875
No 120
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-37 Score=326.07 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=205.0
Q ss_pred cCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+|+..+.||+|+||+||+|+... ...+++|.+.... ....+++.+|+.+++.++||||+++++.+.+.+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46778899999999999998532 2568898887543 3345789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 005536 398 VYEFMPNGTLCQHLQRER----------------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSN 455 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~N 455 (692)
|+||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 999999999999986431 1348899999999999999999998 499999999999
Q ss_pred eEEcCCCceEEeeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcc
Q 005536 456 ILLDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHS 533 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~ 533 (692)
||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 99999999999999999754332221 1223346778999999988889999999999999999999 8888853321
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
....+.+.++..... +.....++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 236 -----~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -----ERLFNLLKTGYRMER------------PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -----HHHHHHHhCCCCCCC------------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 112222322211100 11223578899999999999999999999999998754
No 121
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-37 Score=336.83 Aligned_cols=252 Identities=25% Similarity=0.317 Sum_probs=194.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.|+..++||+|+||+||+++.. +++.||||.+.... ....+++.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3455678999999999999865 57899999997543 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 155 ~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~ 224 (353)
T PLN00034 155 DGGSLEGT------HIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-MDP 224 (353)
T ss_pred CCCccccc------ccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccc-ccc
Confidence 99998643 235677788999999999999999 49999999999999999999999999999864321 122
Q ss_pred cccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 483 STAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.....||..|+|||++.. ...+.++|||||||++|||++|+.||....... ... ....+......+
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~-~~~~~~~~~~~~----- 295 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WAS-LMCAICMSQPPE----- 295 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHH-HHHHHhccCCCC-----
Confidence 234579999999998743 234568999999999999999999997332211 111 111111111110
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.......++.+|+.+||+.+|++||++.||+ .++|...
T Consensus 296 -------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell-------~hp~~~~ 333 (353)
T PLN00034 296 -------APATASREFRHFISCCLQREPAKRWSAMQLL-------QHPFILR 333 (353)
T ss_pred -------CCCccCHHHHHHHHHHccCChhhCcCHHHHh-------cCccccc
Confidence 0112345788999999999999999999988 4677653
No 122
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.6e-37 Score=318.59 Aligned_cols=248 Identities=27% Similarity=0.422 Sum_probs=196.9
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
++||+|+||+||+|+.. +++.||+|.+.... .+....|.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999864 68889999876443 34456799999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc-cccC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-STAP 486 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~-~~~~ 486 (692)
.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......... ....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999754 3458999999999999999999998 499999999999999999999999999987532211110 1111
Q ss_pred CCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 487 ~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..+..|+|||.+.+..++.++||||||+++|||++ |..|+..... ......+..+.... .
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-------~~~~~~~~~~~~~~------------~ 217 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-------QQTREAIEQGVRLP------------C 217 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-------HHHHHHHHcCCCCC------------C
Confidence 23467999999998899999999999999999998 8777753221 11122222111110 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+......+.+|+.+||+.+|++||++.||+++|+.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 11234578899999999999999999999998863
No 123
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-37 Score=326.54 Aligned_cols=261 Identities=24% Similarity=0.350 Sum_probs=205.4
Q ss_pred HHhhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE 392 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~ 392 (692)
+...++|+..++||+|+||.||+|...+ +..||+|.++... .....++.+|+.++++++|+||+++++++.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3456789999999999999999997542 3479999886543 23445688999999999999999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 393 GEPILVYEFMPNGTLCQHLQRER--------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcE
Confidence 99999999999999999997532 1335778889999999999999998 599999999999999999999
Q ss_pred EEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHH
Q 005536 465 KVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAI 542 (692)
Q Consensus 465 kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~ 542 (692)
||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ....
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-------~~~~ 231 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------EQVL 231 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHH
Confidence 9999999985332221 11222345778999999998899999999999999999998 6777753211 1122
Q ss_pred HHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 543 DRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
+.+..+...+. +......+.+++.+||+.+|++|||+.++++.|+...
T Consensus 232 ~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDGGYLDQ------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcCCCCCC------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 22222211110 1122357899999999999999999999999888763
No 124
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.4e-37 Score=322.46 Aligned_cols=259 Identities=24% Similarity=0.352 Sum_probs=208.9
Q ss_pred hccCccceeecccccEEEEEEEEeC-----CCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe-CCee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-----DDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE-EGEP 395 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~-~~~~ 395 (692)
.++|...+.||+|+||.||+|...+ +..|++|+++.. .....+.+.+|+.++++++|+||+++++++.+ ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999999766 678999998754 23456778999999999999999999999876 4678
Q ss_pred EEEEEeCCCCCHHHHHhhccC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 396 ILVYEFMPNGTLCQHLQRERG------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
++++||+++++|.+++..... ..+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999976432 458999999999999999999998 49999999999999999999999999
Q ss_pred cCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhcc
Q 005536 470 GLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 470 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
|+++.......+ ......++..|+|||++.+..++.++||||||+++||+++ |+.||....+.. ....+..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~ 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-------MAAYLKD 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHc
Confidence 999854332222 2233456778999999988889999999999999999999 999886432211 1222222
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
+.... .......++.+++.+||+.+|++|||+.||++.|+.+..
T Consensus 235 ~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 GYRLA------------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCC------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 21000 011223578899999999999999999999999998754
No 125
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-37 Score=330.01 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=207.2
Q ss_pred hccCccceeecccccEEEEEEEEeC--------CCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN--------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE 392 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~ 392 (692)
.++|...+.||+|+||.||+++..+ ...+|+|.++... ....+++.+|+.++.++ +|+||+++++++.+.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4678999999999999999997532 3469999997542 34556788999999999 799999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERG--------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILL 458 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILl 458 (692)
+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEE
Confidence 999999999999999999976432 248999999999999999999998 499999999999999
Q ss_pred cCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCccccc
Q 005536 459 DYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVN 536 (692)
Q Consensus 459 d~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~ 536 (692)
++++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~----- 248 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 248 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----
Confidence 9999999999999875432111 11122234578999999988889999999999999999998 7777753221
Q ss_pred HHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 537 LAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 537 ~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
....+.+..+...+. +.....++.+|+.+||+.+|++||+|.||++.|+++...
T Consensus 249 --~~~~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 --EELFKLLKEGHRMDK------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred --HHHHHHHHcCCCCCC------------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 112222332211111 112345788999999999999999999999999998654
No 126
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-37 Score=321.71 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=199.4
Q ss_pred CccceeecccccEEEEEEEEeCCC---EEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC------Ce
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDD---WVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE------GE 394 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~------~~ 394 (692)
|...++||+|+||.||+|++.+.. .||+|.++.. .....+.|.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 345678999999999999976532 5899988754 244567899999999999999999999987542 25
Q ss_pred eEEEEEeCCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 395 PILVYEFMPNGTLCQHLQRER----GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
.++++||+++|+|.+++...+ ...+++...+.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885432 2348999999999999999999999 599999999999999999999999999
Q ss_pred CCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccC
Q 005536 471 LSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 471 la~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
+++....... .......+++.|++||++.+..++.++||||||+++|||++ |+.||..... ....+.+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-------SEIYDYLRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcC
Confidence 9986432221 11223346778999999999999999999999999999999 7788753221 1123333333
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
..... +......+.+++.+||+.+|++|||+.||++.|+++
T Consensus 231 ~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRLKQ------------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCC------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 22111 012335688999999999999999999999999875
No 127
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.6e-37 Score=322.14 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=201.2
Q ss_pred HHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC-----
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE----- 392 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~----- 392 (692)
+.+++.|+..+.||+|+||.||+|... +++.||+|.+.... ....++.+|+.++.++ +|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 456778899999999999999999865 47889999987543 4456788999999999 699999999998753
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 393 -GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 393 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
...++||||+++++|.+++.......+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 457899999999999999987655679999999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~ 546 (692)
++.... .........|++.|+|||++. ...++.++||||||+++|||++|+.|+....+... .....
T Consensus 158 ~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-------~~~~~ 229 (272)
T cd06637 158 SAQLDR-TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-------LFLIP 229 (272)
T ss_pred ceeccc-ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-------HHHHh
Confidence 975322 122234457899999999875 34688899999999999999999999863321110 11111
Q ss_pred cCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 547 RGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 547 ~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
........+ ......+.+|+.+||+.+|.+||++.|++
T Consensus 230 ~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~il 267 (272)
T cd06637 230 RNPAPRLKS-----------KKWSKKFQSFIESCLVKNHSQRPTTEQLM 267 (272)
T ss_pred cCCCCCCCC-----------CCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 111111111 12235688999999999999999999987
No 128
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-37 Score=331.99 Aligned_cols=257 Identities=25% Similarity=0.336 Sum_probs=201.7
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhCCC-CCeeeeEEEEEeCCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSH-PNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H-~niv~l~g~~~~~~~~~lV~ 399 (692)
+|+..+.||+|+||.||+|+..+ ++.||||+++.. .....+.+..|.+++..++| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788999999999999998654 678999999753 23456678899999999976 56888999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 999999999998764 458999999999999999999999 49999999999999999999999999998742211
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~-------- 219 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVS-------- 219 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCC--------
Confidence 1222345699999999999999999999999999999999999999864321 1112222222110
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+.....++.+++.+||+.+|.+|++..+ ...++++.++|...
T Consensus 220 -----~~~~~~~~~~~li~~~l~~~P~~R~~~~~--~~~~~~~~hp~~~~ 262 (324)
T cd05587 220 -----YPKSLSKEAVSICKGLLTKHPAKRLGCGP--TGERDIREHAFFRR 262 (324)
T ss_pred -----CCCCCCHHHHHHHHHHhhcCHHHcCCCCC--CCHHHHhcCCCcCC
Confidence 01122346789999999999999998632 12334556666543
No 129
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.2e-37 Score=324.40 Aligned_cols=256 Identities=24% Similarity=0.329 Sum_probs=202.5
Q ss_pred hhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE 394 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~ 394 (692)
.+++|...+.||+|+||.||+|...+ +..|++|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678899999999999999998754 4678999886543 3345679999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---ceEE
Q 005536 395 PILVYEFMPNGTLCQHLQRERG-----SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY---RSKV 466 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~---~~kl 466 (692)
.++||||+++++|.+++...+. ..++|..+++++.|++.||+|||+ ++++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976542 258999999999999999999999 4999999999999998754 6999
Q ss_pred eeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHH
Q 005536 467 ADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDR 544 (692)
Q Consensus 467 ~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~ 544 (692)
+|||+++........ .......+..|+|||++.+..++.++||||||+++|||++ |+.||+...... ..+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-------~~~~ 233 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-------VMEF 233 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHH
Confidence 999999864221111 1112234568999999998899999999999999999997 888886432211 1222
Q ss_pred hccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 545 IGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 545 ~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
+......+ .+......+.+++.+||+.+|++||++.+|++.|+
T Consensus 234 ~~~~~~~~------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGGGRLD------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcCCcCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22111110 11123457889999999999999999999998875
No 130
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-38 Score=335.05 Aligned_cols=252 Identities=25% Similarity=0.410 Sum_probs=212.3
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe-eEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE-PILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~-~~lV~ 399 (692)
++|...+.+|+|+||.++..+. .++..+++|++.... ....+..++|+.++++++|||||.+.+.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5688889999999999998874 356789999998653 3345578899999999999999999999999988 99999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
+|++||+|.+.+.+.++..++++.+..++.|++.|+.|||+ +.|+|||||++|||++.+..+||+|||+|+....+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999999887789999999999999999999997 599999999999999999999999999999854443
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......||+.||.||.+.+.+|..|+||||||+++|||.+-+++|...+. .... .++-++.
T Consensus 161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m------~~Li-~ki~~~~---------- 222 (426)
T KOG0589|consen 161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM------SELI-LKINRGL---------- 222 (426)
T ss_pred -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch------HHHH-HHHhhcc----------
Confidence 234556899999999999999999999999999999999999999874432 2221 2222221
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
....+.....++..|+..||+.+|+.||++.+++.+-
T Consensus 223 --~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 223 --YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred --CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 1222234456889999999999999999999998763
No 131
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-38 Score=319.02 Aligned_cols=246 Identities=26% Similarity=0.375 Sum_probs=208.9
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
..+|+..+.||+|.||.|-++.. ..|+.||||.+++. ++++.-.+.+|++||+.|+||||++++.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 34677778899999999999984 66999999999765 455566778999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||..+|.|+||+... ..|++.+...++.||..|+.|+|. ++++|||||.+|||||+|+++||+||||+.++..
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 9999999999999875 459999999999999999999999 4999999999999999999999999999987433
Q ss_pred CCcccccCCCCCCCCCccccccCCCC-CccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLS-DKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s-~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
....+...|.+.|.+||...+.+|. +..|-|||||+||.|+.|..||+... ......++.+|...|--.
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-------hk~lvrQIs~GaYrEP~~-- 275 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-------HKRLVRQISRGAYREPET-- 275 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-------HHHHHHHhhcccccCCCC--
Confidence 2344667899999999999998885 57999999999999999999998432 123455666665544322
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+....-||+|||..||++|.|+.+|+.
T Consensus 276 ------------PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 276 ------------PSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ------------CchHHHHHHHHHhcCcccchhHHHHhh
Confidence 224567999999999999999888764
No 132
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.5e-37 Score=328.33 Aligned_cols=260 Identities=22% Similarity=0.241 Sum_probs=199.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||+|.+... .....+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999865 4789999999742 2334566889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999754 3458999999999999999999999 499999999999999999999999999987543333
Q ss_pred CcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC-ccccc
Q 005536 480 SHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG-CVDEI 553 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ei 553 (692)
........||+.|+|||++.. ..++.++||||||+++|||++|+.||..... ... ...+... ....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~-~~~i~~~~~~~~~ 229 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VET-YGKIMNHKEHFQF 229 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHH-HHHHHcCCCcccC
Confidence 222334569999999999863 4578899999999999999999999864321 111 1112111 10110
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHHHhhhhccccccc
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRD--MRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~--~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
... .......+.+++.+||..+++ .||++.+++ .++|....
T Consensus 230 -----~~~----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l-------~hp~~~~~ 272 (331)
T cd05597 230 -----PPD----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFK-------DHPFFEGI 272 (331)
T ss_pred -----CCc----cCCCCHHHHHHHHHHccCcccccCCCCHHHHh-------cCCCCCCC
Confidence 000 011335678888888765333 377876665 67776543
No 133
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-37 Score=339.53 Aligned_cols=263 Identities=24% Similarity=0.354 Sum_probs=207.8
Q ss_pred HHHhhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCeeeeEEEEE
Q 005536 319 IEKATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCI 390 (692)
Q Consensus 319 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~niv~l~g~~~ 390 (692)
++...++|...++||+|+||.||+|++.+ +..||||+++... ....+.+.+|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 44555678888999999999999998642 3579999997543 233457899999999997 999999999999
Q ss_pred eCCeeEEEEEeCCCCCHHHHHhhccC------------------------------------------------------
Q 005536 391 EEGEPILVYEFMPNGTLCQHLQRERG------------------------------------------------------ 416 (692)
Q Consensus 391 ~~~~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------------ 416 (692)
..+..++||||+++|+|.++++..+.
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975421
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 005536 417 ------------------------------------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSS 454 (692)
Q Consensus 417 ------------------------------------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~ 454 (692)
..+++...+.++.|++.||+|||+ ++|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcc
Confidence 236788889999999999999998 59999999999
Q ss_pred ceEEcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCc
Q 005536 455 NILLDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPH 532 (692)
Q Consensus 455 NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~ 532 (692)
|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.|+......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999986432221 11223357889999999998889999999999999999998 88887533211
Q ss_pred ccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
......+..+.... . +.....++.+|+.+||+.+|.+||+++||++.|+++.
T Consensus 349 ------~~~~~~~~~~~~~~--~----------p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 ------EQFYNAIKRGYRMA--K----------PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ------HHHHHHHHcCCCCC--C----------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11222222221110 0 1112357899999999999999999999999999863
No 134
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.9e-37 Score=326.11 Aligned_cols=260 Identities=24% Similarity=0.332 Sum_probs=207.8
Q ss_pred HhhccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE 392 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~ 392 (692)
...++|...+.||+|+||.||++... .+..||||.++... ....+.+.+|+.+++++ +|+||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 34467889999999999999999742 23479999987553 33456789999999999 799999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
+..++||||+++|+|.++++......+++..++.++.|++.||+|||+ ++|+|+||||+|||+++++.+||+|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999999987655558999999999999999999998 49999999999999999999999999999
Q ss_pred ccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 473 RLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 473 ~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
+........ ......++..|+|||.+....++.++||||||+++|||++ |+.|+...... ..+...+..+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~------~~~~~~~~~~~~ 262 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD------SKFYKLIKEGYR 262 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch------HHHHHHHHcCCc
Confidence 864332211 1223346788999999998899999999999999999998 88887633221 111222222211
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.. . +.....++.+++.+||+.+|++||++.||++.|+++
T Consensus 263 ~~-----~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 MA-----Q-------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CC-----C-------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 0 011235788999999999999999999999999874
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-37 Score=319.34 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=201.2
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
++|+..+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688899999999999999996 467889999998665556677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.++++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06646 89 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AK 162 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc-cc
Confidence 999999998754 458999999999999999999998 499999999999999999999999999997532211 11
Q ss_pred cccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 483 STAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....|+..|+|||.+. ...++.++||||||+++|||++|+.|+....+.... ..+.... ...+...
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-------~~~~~~~---~~~~~~~ 232 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-------FLMSKSN---FQPPKLK 232 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-------eeeecCC---CCCCCCc
Confidence 23346889999999874 445788999999999999999999988533221110 0011110 0011110
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
. .......+.+++.+||+.+|++||+++++++.
T Consensus 233 -~----~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 233 -D----KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -c----ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0 01223578899999999999999999999863
No 136
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=339.69 Aligned_cols=243 Identities=24% Similarity=0.375 Sum_probs=203.8
Q ss_pred hhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~ 396 (692)
..++|...+.||+|.||+|+++.+.. ++.+|||.+++.. .++.+..+.|..|+...+ ||.++.|+.+|.+.++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 44689999999999999999998654 7889999999763 567788899999998885 999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||+.||++..+.+ ...+++..+.-+|.+|+.||+|||+ ++||+||||.+|||||.+|.+||+||||++..+
T Consensus 446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999543333 3459999999999999999999999 499999999999999999999999999999755
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.... ......|||.|||||++.+..|+...|.|||||+|||||.|..||...+..+ ..+.|..
T Consensus 520 ~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------~FdsI~~--------- 582 (694)
T KOG0694|consen 520 GQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------VFDSIVN--------- 582 (694)
T ss_pred CCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-------HHHHHhc---------
Confidence 3333 4466789999999999999999999999999999999999999997543321 1122211
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTM 591 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm 591 (692)
+...++.-...+.+.|+.++|..+|++|.-+
T Consensus 583 ----d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 ----DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1122344556788999999999999999876
No 137
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-38 Score=303.14 Aligned_cols=247 Identities=29% Similarity=0.353 Sum_probs=208.7
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.++|+..+.||+|.||.||.|+.+ ++-.||+|++.+.. ....+++.+|++|-+.|+||||+++++++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356888999999999999999854 46789999997652 33457899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+||.++|.|...|+..+...+++.....+..|+|.||.|+|. ++||||||||+|+|++.++..||+|||-+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 999999999999997777779999999999999999999999 699999999999999999999999999986522
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
........||..|++||...+..++.+.|+|++|++.||++.|.+||+... .....+++.+- ++.+|
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-------~~etYkrI~k~---~~~~p-- 242 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-------HSETYKRIRKV---DLKFP-- 242 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-------hHHHHHHHHHc---cccCC--
Confidence 334456689999999999999999999999999999999999999997433 12233444332 22222
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
......+.+|+.+|+..+|.+|.+..||+
T Consensus 243 --------~~is~~a~dlI~~ll~~~p~~r~~l~~v~ 271 (281)
T KOG0580|consen 243 --------STISGGAADLISRLLVKNPIERLALTEVM 271 (281)
T ss_pred --------cccChhHHHHHHHHhccCccccccHHHHh
Confidence 12345788999999999999999976665
No 138
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.8e-37 Score=328.77 Aligned_cols=261 Identities=21% Similarity=0.229 Sum_probs=199.6
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|...+.||+|+||+||+++.. +++.||+|.+... .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 4788999998743 2234456889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997642 458999999999999999999999 599999999999999999999999999997643333
Q ss_pred CcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 480 SHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
........||+.|+|||++.+ ..++.++||||||++||||++|+.||...... . ....+......--+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~-~~~~i~~~~~~~~~ 229 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------E-TYGKIMNHEERFQF 229 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH------H-HHHHHHcCCCcccC
Confidence 222334569999999999875 46788999999999999999999999643221 1 11222111100000
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhhhhccccccc
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDM--RPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~--RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.+.. .....++.+++.+||...+++ |++++++ ..++|....
T Consensus 230 p~~~--------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~-------~~h~~f~~~ 272 (331)
T cd05624 230 PSHI--------TDVSEEAKDLIQRLICSRERRLGQNGIEDF-------KKHAFFEGI 272 (331)
T ss_pred CCcc--------ccCCHHHHHHHHHHccCchhhcCCCCHHHH-------hcCCCcCCC
Confidence 1100 122357888999999865543 3455444 466666543
No 139
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.2e-37 Score=330.28 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=200.4
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~ 399 (692)
+|+..+.||+|+||+||+++.. +++.||||.++... ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 46789999997542 23445677888888877 5899999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999998764 358999999999999999999999 499999999999999999999999999997532221
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+.+....
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-------~~~~~~i~~~~~~-------- 219 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHNVA-------- 219 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--------
Confidence 222345799999999999999999999999999999999999999964322 1112222222110
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.+.....++.+|+.+||+.+|++|++...- ..+++..++|..
T Consensus 220 -----~p~~~s~~~~~li~~~l~~~p~~R~~~~~~--~~~~i~~h~~~~ 261 (323)
T cd05616 220 -----YPKSMSKEAVAICKGLMTKHPGKRLGCGPE--GERDIKEHAFFR 261 (323)
T ss_pred -----CCCcCCHHHHHHHHHHcccCHHhcCCCCCC--CHHHHhcCCCcC
Confidence 111233567899999999999999985211 123344555544
No 140
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.2e-37 Score=332.77 Aligned_cols=260 Identities=22% Similarity=0.312 Sum_probs=199.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||||+++... ......+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999864 47899999997532 234467889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999764 458999999999999999999999 499999999999999999999999999987532110
Q ss_pred C----------------------------------cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcc
Q 005536 480 S----------------------------------HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKV 525 (692)
Q Consensus 480 ~----------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p 525 (692)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 001234699999999999998999999999999999999999999
Q ss_pred cCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHHHHhhhh
Q 005536 526 VDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLA--FHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~--~~p~~RPsm~eVl~~L~~i~~ 603 (692)
|....+. .....+......-.+.+.. ....++.+++.+++. .++..||+++||+ .
T Consensus 236 f~~~~~~-------~~~~~i~~~~~~~~~p~~~---------~~s~~~~~li~~l~~~~~~r~~r~~~~ei~-------~ 292 (363)
T cd05628 236 FCSETPQ-------ETYKKVMNWKETLIFPPEV---------PISEKAKDLILRFCCEWEHRIGAPGVEEIK-------T 292 (363)
T ss_pred CCCCCHH-------HHHHHHHcCcCcccCCCcC---------CCCHHHHHHHHHHcCChhhcCCCCCHHHHh-------C
Confidence 9643321 1122222211110111100 122356677777554 2334568877775 6
Q ss_pred cccccccc
Q 005536 604 SSWASNIY 611 (692)
Q Consensus 604 ~~~~~~~~ 611 (692)
++|.....
T Consensus 293 hp~f~~~~ 300 (363)
T cd05628 293 NPFFEGVD 300 (363)
T ss_pred CCCCCCCC
Confidence 77776543
No 141
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-37 Score=322.08 Aligned_cols=256 Identities=25% Similarity=0.351 Sum_probs=205.7
Q ss_pred hccCccceeecccccEEEEEEEEeC------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~ 395 (692)
.++|...+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4678889999999999999998643 3579999987543 34456789999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhccC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEe
Q 005536 396 ILVYEFMPNGTLCQHLQRERG--------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVA 467 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~--------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~ 467 (692)
++||||+++|+|.+++..... ..++|..++.++.|++.||.|||+ .+|+||||||+|||+++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence 999999999999999975321 247899999999999999999998 599999999999999999999999
Q ss_pred eecCCccCCCCC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHh
Q 005536 468 DFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRI 545 (692)
Q Consensus 468 DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~ 545 (692)
|||+++...... ........++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ...+.+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~~~~~~ 234 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-------EVLKFV 234 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-------HHHHHH
Confidence 999987533222 122234457889999999988889999999999999999998 88887533221 112222
Q ss_pred ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 546 ~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
..+...... ......+.+++.+||+.+|++|||+.|+++.|++
T Consensus 235 ~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 IDGGHLDLP------------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred hcCCCCCCC------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 222211111 1124578899999999999999999999998863
No 142
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-37 Score=330.96 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=200.6
Q ss_pred eeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++... ++.||||.++.. .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999998754 678999999854 234556778899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTS 154 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccc
Confidence 9999988764 359999999999999999999999 499999999999999999999999999987522221 2223
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-------~~~~~~i~~~~~~------------- 214 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-------DELFQSILEDEVR------------- 214 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCC-------------
Confidence 44689999999999999999999999999999999999999864321 1112222221110
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+......+.+|+.+||+.+|++||++.+ ..+.++..++|...
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~--~~~~~ll~~~~~~~ 257 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLP--TGEQDIKGHPFFRE 257 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCC--CCHHHHhcCCCcCC
Confidence 01122356889999999999999999844 33444556677654
No 143
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-37 Score=320.30 Aligned_cols=255 Identities=24% Similarity=0.393 Sum_probs=204.9
Q ss_pred ccCccceeecccccEEEEEEEEeC----CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.+|+..+.||+|+||.||+|+... +..+|+|.++... ....+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 467888999999999999998642 3379999987543 33456899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999997653 458999999999999999999999 49999999999999999999999999999864332
Q ss_pred CCcccc--cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 479 SSHIST--APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 479 ~~~~~~--~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
...... ...++..|++||++.+..++.++||||||+++||+++ |+.||...... .....+.++...
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-------~~~~~~~~~~~~---- 228 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-------DVIKAIEEGYRL---- 228 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-------HHHHHHhCCCcC----
Confidence 222211 2234568999999998899999999999999999887 99888533221 122233322110
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+ .+...+..+.+++.+||+.+|.+||+|.++++.|+++
T Consensus 229 ~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 P--------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C--------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 0112345678999999999999999999999999875
No 144
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.1e-37 Score=317.03 Aligned_cols=247 Identities=23% Similarity=0.392 Sum_probs=196.7
Q ss_pred eecccccEEEEEEEEe---CCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCC
Q 005536 331 RLGTGAYGTVYAGKLH---NDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGT 406 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs 406 (692)
.||+|+||.||+|++. ++..||+|.+..... ...++|.+|+.++++++|+||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999864 345699999876533 34567999999999999999999999875 457899999999999
Q ss_pred HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc--cc
Q 005536 407 LCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI--ST 484 (692)
Q Consensus 407 L~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~ 484 (692)
|.+++... ...+++..+++++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++......... ..
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99998754 3468999999999999999999998 499999999999999999999999999997543322211 12
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
...++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+..+...+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~----------- 218 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-------PEVMSFIEQGKRLD----------- 218 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-------HHHHHHHHCCCCCC-----------
Confidence 2234678999999988889999999999999999996 9888863321 11223333332111
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.+.....++.+++.+||+.+|++||++.+|++.|+.+
T Consensus 219 -~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 -CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1112345788999999999999999999999999875
No 145
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.1e-37 Score=332.76 Aligned_cols=262 Identities=19% Similarity=0.249 Sum_probs=203.1
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG 393 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~ 393 (692)
++....++|+..+.||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999975 4788999998642 2234456889999999999999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccce
Confidence 999999999999999998653 48889999999999999999999 499999999999999999999999999998
Q ss_pred cCCCCCCcccccCCCCCCCCCccccccC----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQYF----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
..............||+.|+|||.+.+. .++.++||||||++||||++|+.||..... .. ....+....
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~-~~~~i~~~~ 263 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VG-TYSKIMDHK 263 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HH-HHHHHHhCC
Confidence 6432222222455799999999998654 378899999999999999999999964321 11 112222111
Q ss_pred -ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhhhhcccccc
Q 005536 550 -VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDM--RPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 550 -~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~--RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
...+.+ .......+.+++.+||+.++.+ ||++.|++ .++|...
T Consensus 264 ~~~~~p~----------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l-------~hp~~~~ 309 (370)
T cd05621 264 NSLNFPE----------DVEISKHAKNLICAFLTDREVRLGRNGVEEIK-------QHPFFKN 309 (370)
T ss_pred cccCCCC----------cccCCHHHHHHHHHHccCchhccCCCCHHHHh-------cCcccCC
Confidence 011000 0123456778999999855543 88987776 4677654
No 146
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-37 Score=325.68 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=202.5
Q ss_pred cCccceeecccccEEEEEEEEeC------CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
.|...++||+|+||+||+|+..+ +..||+|+++..... ..+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 35667789999999999998643 467999999755332 34678899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 398 VYEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
++||+++++|.+++.... ...+++..+++++.|++.||+|||+ .+|+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence 999999999999986321 1348899999999999999999998 49999999999999999999
Q ss_pred eEEeeecCCccCCCCC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHH
Q 005536 464 SKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALA 541 (692)
Q Consensus 464 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~ 541 (692)
+||+|||+++...... ........+++.|+|||.+.+..++.++||||||+++|||++ |..|+..... ...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~~ 235 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 235 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-------HHH
Confidence 9999999987533221 122233456789999999988889999999999999999998 7777653211 122
Q ss_pred HHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 542 ~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.+.+.++....+ +......+.+|+.+||+.+|++||+++||+..|+.
T Consensus 236 ~~~i~~~~~~~~------------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEMIRNRQVLPC------------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHcCCcCCC------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 333333322111 11234568899999999999999999999998874
No 147
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1e-36 Score=318.71 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=203.7
Q ss_pred ccCccceeecccccEEEEEEEE-----eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--Cee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-----HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~ 395 (692)
+.|...+.||+|+||.||+++. .++..||+|.++... ....+.+.+|++++++++||||+++.+++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4567888999999999999974 346789999987553 34456799999999999999999999998875 568
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999997542 358999999999999999999998 59999999999999999999999999999864
Q ss_pred CCCCCc--ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCC--------cccccHHHHHHHHh
Q 005536 476 MTESSH--ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRP--------HSEVNLAALAIDRI 545 (692)
Q Consensus 476 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~--------~~~~~~~~~~~~~~ 545 (692)
...... ......++..|+|||++.+..++.++||||||+++|||++++.|...... .............+
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 332211 12234567789999999888899999999999999999998765432110 00000011112222
Q ss_pred ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 546 ~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
..+..... .......+.+|+.+||+.+|++||++.++++.|+.+
T Consensus 240 ~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRLPR------------PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccCCC------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 22211110 112345789999999999999999999999999876
No 148
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-37 Score=327.24 Aligned_cols=262 Identities=22% Similarity=0.339 Sum_probs=208.3
Q ss_pred HhhccCccceeecccccEEEEEEEEe--------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH--------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCI 390 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~ 390 (692)
....+|...+.||+|+||.||+++.. ++..||+|.++... ....+++.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34567888899999999999999742 23479999987542 34567899999999999 8999999999999
Q ss_pred eCCeeEEEEEeCCCCCHHHHHhhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 005536 391 EEGEPILVYEFMPNGTLCQHLQRERG--------------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNI 456 (692)
Q Consensus 391 ~~~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NI 456 (692)
..+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceE
Confidence 99999999999999999999986421 347889999999999999999999 4999999999999
Q ss_pred EEcCCCceEEeeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCccc
Q 005536 457 LLDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSE 534 (692)
Q Consensus 457 Lld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~ 534 (692)
|+++++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..|+....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---- 244 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 244 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 9999999999999999864332221 1223456788999999988889999999999999999998 677764321
Q ss_pred ccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 535 VNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 535 ~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.....+.+..+..... +......+.+|+.+||+.+|++||+|.||++.|++|...
T Consensus 245 ---~~~~~~~~~~~~~~~~------------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 ---VEELFKLLKEGHRMDK------------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred ---HHHHHHHHHcCCcCCC------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1122333332211110 112345788999999999999999999999999987643
No 149
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.8e-37 Score=333.87 Aligned_cols=258 Identities=22% Similarity=0.322 Sum_probs=201.9
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||||+++... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999865 57899999997542 334566889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999764 4589999999999999999999994 99999999999999999999999999986432110
Q ss_pred Cc-------------------------------------ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhC
Q 005536 480 SH-------------------------------------ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA 522 (692)
Q Consensus 480 ~~-------------------------------------~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg 522 (692)
.. ......||+.|+|||++....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 01124599999999999988999999999999999999999
Q ss_pred CcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHHH
Q 005536 523 LKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPT---MMEVAEELE 599 (692)
Q Consensus 523 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs---m~eVl~~L~ 599 (692)
+.||....+.. ....+......-.+ + .. ......+.+|+.+|+. +|.+|++ +.|++
T Consensus 236 ~~Pf~~~~~~~-------~~~~i~~~~~~~~~-~----~~----~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll---- 294 (364)
T cd05599 236 YPPFCSDNPQE-------TYRKIINWKETLQF-P----DE----VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIK---- 294 (364)
T ss_pred CCCCCCCCHHH-------HHHHHHcCCCccCC-C----CC----CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHh----
Confidence 99997433211 11122111100000 0 00 0123467789999997 8999997 66665
Q ss_pred hhhhccccccc
Q 005536 600 HIRVSSWASNI 610 (692)
Q Consensus 600 ~i~~~~~~~~~ 610 (692)
.++|....
T Consensus 295 ---~h~~~~~~ 302 (364)
T cd05599 295 ---SHPFFKGV 302 (364)
T ss_pred ---cCCCcCCC
Confidence 56666543
No 150
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.6e-37 Score=318.17 Aligned_cols=246 Identities=25% Similarity=0.394 Sum_probs=197.3
Q ss_pred eecccccEEEEEEEEe---CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 331 RLGTGAYGTVYAGKLH---NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+||+|+||+||+|.+. ++..+|+|+++... ....+++.+|+.++++++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 46789999987543 334678999999999999999999999875 45678999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc--c
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI--S 483 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~--~ 483 (692)
+|.+++... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......... .
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999999754 458999999999999999999998 599999999999999999999999999997643322211 1
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++..|+|||.+....++.++||||||+++|||++ |+.||..... ....+.+.++...+.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~i~~~~~~~~--------- 219 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-------NEVTQMIESGERMEC--------- 219 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCCCCC---------
Confidence 22234679999999988889999999999999999998 8888864321 112333443322111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+.....++.+|+.+||+.+|++||++.+|.+.|+..
T Consensus 220 ---~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 ---PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 112335788999999999999999999999999863
No 151
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.2e-37 Score=322.24 Aligned_cols=263 Identities=25% Similarity=0.353 Sum_probs=200.1
Q ss_pred hccCccceeecccccEEEEEEEEeC---------------CCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN---------------DDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLL 386 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~ 386 (692)
.++|+..++||+|+||.||+++..+ ...||+|.++.. .....+.|.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578888999999999999987542 124899998754 234456799999999999999999999
Q ss_pred EEEEeCCeeEEEEEeCCCCCHHHHHhhccC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 005536 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG----------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNI 456 (692)
Q Consensus 387 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~----------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NI 456 (692)
+++...+..++||||+++++|.+++..... ..+++..++.++.|++.||+|||+ .+++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhE
Confidence 999999999999999999999999965321 237899999999999999999999 4999999999999
Q ss_pred EEcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhC--CcccCCCCCcc
Q 005536 457 LLDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA--LKVVDFSRPHS 533 (692)
Q Consensus 457 Lld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg--~~p~~~~~~~~ 533 (692)
|+++++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||+++ ..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 999999999999999975332221 122334457799999999888999999999999999999984 4455422111
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.......+............ .+......+.+|+.+||+.+|++||+|.+|++.|++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 --QVIENTGEFFRNQGRQIYLS---------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHHhhhhccccccCC---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11111111111100000000 011123578999999999999999999999998863
No 152
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=327.35 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=206.6
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..|...+.||+|.||.||||.. ..++.||+|++... ..+++++.++|+.+|.+++++||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4566678899999999999985 44788999999865 456678899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+.+|++.+.|... ..+.+..+.-|.+++..||.|||+. +.+|||||+.|||+..+|.+||+|||++-........
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 9999999999753 3457888888999999999999995 9999999999999999999999999999765444333
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
. ...+||+.|||||+++...|+.|+||||||++.+||.+|.+|+..-.|..-..+ | .+-.-|.+.+
T Consensus 168 r-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------I-----pk~~PP~L~~- 233 (467)
T KOG0201|consen 168 R-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------I-----PKSAPPRLDG- 233 (467)
T ss_pred c-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------c-----cCCCCCcccc-
Confidence 3 667899999999999988999999999999999999999999875544221111 1 1111222221
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.....+.+++..||+.||+.||++.++++
T Consensus 234 ------~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 234 ------DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ------ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 33456889999999999999999999874
No 153
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-37 Score=316.48 Aligned_cols=250 Identities=23% Similarity=0.362 Sum_probs=205.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
+|+..++||+|+||.||+++.. +++.+|+|.++.. .....+++.+|+.++++++|+||+++++.+.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999854 5788999998653 2345678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.......+++...+.++.|++.||.|||+ .+|+|+||||+||++++++.++|+|||+++..... ...
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-GAY 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc-ccc
Confidence 99999999977656668999999999999999999999 49999999999999999999999999998753322 222
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+..+....+
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--------- 220 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-------KNLILKVCQGSYKPL--------- 220 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-------HHHHHHHhcCCCCCC---------
Confidence 2345689999999999988999999999999999999999999864321 111222323222211
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
+......+.+|+.+||+.+|++||++.||+..
T Consensus 221 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ---PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11223467899999999999999999999753
No 154
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.1e-37 Score=317.28 Aligned_cols=249 Identities=25% Similarity=0.420 Sum_probs=201.9
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe-CCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE-EGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~-~~~~~lV~E~~ 402 (692)
++|...+.||+|+||.||++... +..|++|.++.. ...+.|.+|+.++++++|+|++++++++.+ .+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46788899999999999999764 778999998643 345679999999999999999999998654 46789999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.......+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---- 155 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 155 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc----
Confidence 99999999987655568999999999999999999998 49999999999999999999999999998753221
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++.+..++.++||||||+++|||++ |+.|+.... +. .....+.++...+.
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~-~~~~~~~~~~~~~~-------- 220 (256)
T cd05082 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LK-DVVPRVEKGYKMDA-------- 220 (256)
T ss_pred CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HH-HHHHHHhcCCCCCC--------
Confidence 123345678999999998899999999999999999998 888875321 11 12222322211111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.......+.+++.+||+.+|++|||+.++++.|++|
T Consensus 221 ----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 ----PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 112345788999999999999999999999999864
No 155
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.1e-37 Score=326.42 Aligned_cols=237 Identities=25% Similarity=0.357 Sum_probs=190.7
Q ss_pred eeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+|+..+ ++.||||.++... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999654 6889999997541 23455677788888765 899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTC 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Ccee
Confidence 9999999754 458999999999999999999999 499999999999999999999999999987522211 1223
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+. +...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~i~~~~------~~~~----- 216 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-------EELFQSIRMDN------PCYP----- 216 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC------CCCC-----
Confidence 45689999999999988999999999999999999999999864321 11122222211 1010
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMM 592 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~ 592 (692)
.....++.+++.+||+.+|++||++.
T Consensus 217 --~~~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 217 --RWLTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred --ccCCHHHHHHHHHHhccCHhhcCCCh
Confidence 11224678999999999999999986
No 156
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.8e-37 Score=320.20 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=204.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCC----EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDD----WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+.|+..++||+|+||+||+|++. +++ .||+|.++... ....+++.+|+.++..++|+||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 46778899999999999999853 444 48999987543 34466789999999999999999999998754 5789
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999997643 458999999999999999999999 5999999999999999999999999999986432
Q ss_pred CCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.... ......+++.|++||.+.+..++.++||||||+++|||++ |..|++.... ......+..+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~-- 232 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-------REIPDLLEKGERLPQ-- 232 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCcCCC--
Confidence 2221 1122345678999999988899999999999999999998 8888763321 111222222211110
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 605 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~ 605 (692)
+......+.+++.+||+.+|++||++.|+++.|+.+...+
T Consensus 233 ----------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 233 ----------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0122356889999999999999999999999999886543
No 157
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.2e-37 Score=319.15 Aligned_cols=249 Identities=28% Similarity=0.421 Sum_probs=196.6
Q ss_pred eeecccccEEEEEEEEeC-CC--EEEEEEeecC-CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-DD--WVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||.||+|++.+ +. .+++|.++.. .....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999755 33 4788888743 344567899999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 405 GTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 405 gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
|+|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997542 1248899999999999999999998 599999999999999999999999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
+++.... .........+..|+|||++....++.++||||||+++|||++ |..||..... . ...+.+..+.
T Consensus 158 l~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~-~~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------A-ELYEKLPQGY 228 (270)
T ss_pred Cccccch--hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH------H-HHHHHHhCCC
Confidence 9863111 111112234668999999988899999999999999999997 9888853211 1 1122222211
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
..+. +......+.+|+.+||+.+|.+||++.|+++.|+++-
T Consensus 229 ~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 RLEK------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC------------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1110 1122356889999999999999999999999998763
No 158
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.5e-37 Score=317.11 Aligned_cols=257 Identities=25% Similarity=0.346 Sum_probs=203.7
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
|++.+++++.....||+|+||.||+|+.. ++..|++|.+........+.+.+|+.++++++|+||+++++++...+..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 45667788888889999999999999854 46789999988776667788999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCCc
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGL--PWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSR 473 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l--~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~ 473 (692)
+|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 9999999999999998643 234 888889999999999999998 59999999999999986 6799999999987
Q ss_pred cCCCCCCcccccCCCCCCCCCccccccCC--CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQYFH--LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
...... .......|++.|+|||++.... ++.++||||||+++|||++|+.|+......... .+ .......
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~---~~~~~~~- 229 (268)
T cd06624 158 RLAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MF---KVGMFKI- 229 (268)
T ss_pred ecccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---Hh---hhhhhcc-
Confidence 533221 2223345899999999986643 788999999999999999999998632211110 00 0000000
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+ ..+.....++.+++.+||+.+|++||++.|+++
T Consensus 230 ---~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 ---HP-------EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---CC-------CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 111123356889999999999999999999874
No 159
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.7e-37 Score=320.42 Aligned_cols=263 Identities=27% Similarity=0.384 Sum_probs=204.1
Q ss_pred hccCccceeecccccEEEEEEEEeC-----------------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-----------------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLR 384 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~ 384 (692)
.++|+..+.||+|+||.||+++..+ +..||+|.+.... ....+++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578889999999999999987643 2458999987553 345678999999999999999999
Q ss_pred eEEEEEeCCeeEEEEEeCCCCCHHHHHhhccC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 005536 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERG---------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSN 455 (692)
Q Consensus 385 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~N 455 (692)
+++++..++..++|+||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999976531 2589999999999999999999984 99999999999
Q ss_pred eEEcCCCceEEeeecCCccCCCCC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh--CCcccCCCCCc
Q 005536 456 ILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT--ALKVVDFSRPH 532 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt--g~~p~~~~~~~ 532 (692)
|+++.++.+||+|||+++...... ........+++.|+|||++.+..++.++||||||+++|||++ +..|+.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 999999999999999987533221 122334557889999999988899999999999999999998 5556542211
Q ss_pred ccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
..................... .+...+.++.+|+.+||+.+|++|||+.||++.|++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 --QQVIENAGHFFRDDGRQIYLP---------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --HHHHHHHHhccccccccccCC---------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 111111111111111111100 011223578999999999999999999999998863
No 160
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.5e-37 Score=320.29 Aligned_cols=256 Identities=21% Similarity=0.276 Sum_probs=198.1
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||+||++... +++.||+|.+.... ....+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999854 57899999987542 22346778999999999999999999999999999999999999999
Q ss_pred HHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 408 CQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 408 ~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...... .....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccc
Confidence 9888543 23458999999999999999999999 499999999999999999999999999997533222 22234
Q ss_pred CCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCcc
Q 005536 486 PQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAW 565 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~ 565 (692)
..||+.|+|||++.+..++.++||||||+++|||++|+.||........ .......+..+.. ..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~-------------~~ 220 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQRILNDSV-------------TY 220 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh---HHHHHHhhcccCC-------------CC
Confidence 5789999999999999999999999999999999999999964322111 1111111111100 01
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 566 TLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 566 ~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
+......+.+++.+||+.+|++||++++. ..+++..++|...
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~--~~~~~l~h~~~~~ 262 (280)
T cd05608 221 PDKFSPASKSFCEALLAKDPEKRLGFRDG--NCDGLRTHPLFRD 262 (280)
T ss_pred cccCCHHHHHHHHHHhcCCHHHhcCCCCC--CHHHHhcChhhhc
Confidence 11234578899999999999999954332 1333345677654
No 161
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.8e-37 Score=316.37 Aligned_cols=251 Identities=28% Similarity=0.474 Sum_probs=203.3
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
..|+..+.||+|+||.||++...+++.+|+|.++.. ....++|.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 357778899999999999999877889999998754 3345679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 999999997653 4589999999999999999999984 999999999999999999999999999875433222222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++.+|+|||++.+..++.++||||||+++|||++ |+.|+..... ....+.+.++. ....+..
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~--~~~~~~~---- 225 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-------SEVVETINAGF--RLYKPRL---- 225 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-------HHHHHHHhCCC--CCCCCCC----
Confidence 23345678999999998899999999999999999998 8888863221 11222232221 1111111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
....+.+|+.+||+.+|++||++.||+++|
T Consensus 226 ------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 235789999999999999999999999877
No 162
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.2e-37 Score=315.49 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=200.3
Q ss_pred eeecccccEEEEEEEEeC--C--CEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN--D--DWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|++|+||+|.+.+ + ..||||.+..... ...++|.+|+.++++++|+||+++++.+.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998654 2 2699999987655 567789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc--c
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH--I 482 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~--~ 482 (692)
++|.+++.......++|...+.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........ .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999987543568999999999999999999999 59999999999999999999999999999864332211 1
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||++.+..++.++||||||+++|||++ |+.|+...... . ....+... ....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~~~~~-~~~~-------- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------Q-ILKKIDKE-GERL-------- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHhc-CCcC--------
Confidence 223457889999999998899999999999999999999 99988533211 1 11111110 0000
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
..+...+..+.+++.+||+.+|++||++.||++.|.
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 001123457889999999999999999999998875
No 163
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=330.66 Aligned_cols=256 Identities=26% Similarity=0.437 Sum_probs=217.3
Q ss_pred ccCccceeecccccEEEEEEEEeCC-----CEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHND-----DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+.....++||.|.||.||+|.+.+- -.||||..+.. +.+..+.|+.|..++++++||||++|+|+|.+. ..+|
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence 3444567899999999999986543 25999999874 466788999999999999999999999999865 5799
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
|||.++-|.|..||+.++ ..|+.......+.||..||+|||+ ..++||||..+|||+....-+||+|||++|....
T Consensus 468 vmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999999999874 459999999999999999999999 4999999999999999999999999999998766
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
+.....+...-...|||||.+...+++.+||||-|||.+||++. |.+||..-...+ ++-.
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-------------------VI~~ 604 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-------------------VIGH 604 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-------------------eEEE
Confidence 66655555566789999999999999999999999999999997 899997433211 1111
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
.-.+++.+.+..++..+..|..+||.++|.+||.+.|+...|..+..
T Consensus 605 iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 605 IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22344555667788899999999999999999999999999988765
No 164
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.8e-36 Score=316.08 Aligned_cols=249 Identities=23% Similarity=0.306 Sum_probs=196.9
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
+|+..+.||+|+||.||+++. .+++.||+|.+... .....++|.+|++++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577788999999999999985 46788999998754 2344567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|..+. .+++..+..++.|++.||+|||+ .+|+|+||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~ 149 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---I 149 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---c
Confidence 999996542 37888899999999999999999 49999999999999999999999999999753221 2
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....||..|+|||++.+..++.++||||||+++|||++|+.||................+.+..... +.+..
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-- 222 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-----PVLPV-- 222 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-----CCCCC--
Confidence 23457899999999999889999999999999999999999998643222111111111111111111 11100
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.....++.+++.+||+.+|++||+++|+++
T Consensus 223 ----~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 223 ----GQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred ----CcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 012346789999999999999999999874
No 165
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.7e-37 Score=318.35 Aligned_cols=254 Identities=24% Similarity=0.388 Sum_probs=202.3
Q ss_pred cCccceeecccccEEEEEEEEeC-C---CEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-D---DWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
.|+..+.||+|+||.||+|+... + ..||||.++.. .....++|..|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999998654 2 36999998754 3445678999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999997653 458999999999999999999998 499999999999999999999999999987543221
Q ss_pred Cc-cccc-CC--CCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 480 SH-ISTA-PQ--GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 480 ~~-~~~~-~~--gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
.. .... .. .+..|+|||++.+..++.++||||||+++|||++ |..||..... ....+.+......
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-------~~~~~~i~~~~~~--- 230 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-------QDVINAIEQDYRL--- 230 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-------HHHHHHHHcCCcC---
Confidence 11 1111 11 2457999999999999999999999999999887 8888853321 1122222221100
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
..+.+.+..+.+++.+||+.+|++||+|.+|+..|+++
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 ---------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00112345678999999999999999999999999875
No 166
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.3e-37 Score=325.84 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=206.7
Q ss_pred hhccCccceeecccccEEEEEEEEe--------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH--------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIE 391 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~ 391 (692)
..++|...++||+|+||.||+++.. ....||+|.++... ....+++.+|+.+++++ +||||+++++++.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3457888899999999999999742 23469999987542 34567789999999999 69999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceE
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNIL 457 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NIL 457 (692)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEE
Confidence 999999999999999999997642 1348999999999999999999998 49999999999999
Q ss_pred EcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccc
Q 005536 458 LDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEV 535 (692)
Q Consensus 458 ld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~ 535 (692)
+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---- 242 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---- 242 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH----
Confidence 99999999999999976432211 11122234568999999988899999999999999999999 7888753221
Q ss_pred cHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 536 NLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 536 ~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
....+.+..+...+. +.....++.+|+.+||+.+|++||++.|+++.|+++...
T Consensus 243 ---~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 243 ---EELFKLLREGHRMDK------------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred ---HHHHHHHHcCCCCCC------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 122233333221111 112234688999999999999999999999999998754
No 167
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=315.80 Aligned_cols=260 Identities=23% Similarity=0.317 Sum_probs=201.0
Q ss_pred HHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--------------chhHHHHHHHHHHHHhCCCCCeee
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--------------TDSIDQVMNEIKLLSSVSHPNLLR 384 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--------------~~~~~~~~~E~~il~~l~H~niv~ 384 (692)
.+..++|...+.||+|.||.|-+|+. .+++.||||++.+.. ....++..+|+.||++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 44567899999999999999999984 458899999996431 112468899999999999999999
Q ss_pred eEEEEEe--CCeeEEEEEeCCCCCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 005536 385 LLGCCIE--EGEPILVYEFMPNGTLCQHLQRERGSG-LPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN 461 (692)
Q Consensus 385 l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~-l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~ 461 (692)
|+.+..+ .+..|||+||+..|.+... ....+ |+..+.++++.++..||+|||. ++||||||||+|+||+++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCC
Confidence 9999865 4689999999998887432 12234 8999999999999999999999 599999999999999999
Q ss_pred CceEEeeecCCccCCC----CCCcccccCCCCCCCCCccccccCC----CCCccceeehhHHHHHHHhCCcccCCCCCcc
Q 005536 462 YRSKVADFGLSRLGMT----ESSHISTAPQGTPGYLDPQYHQYFH----LSDKSDVYSFGVVLIEIITALKVVDFSRPHS 533 (692)
Q Consensus 462 ~~~kl~DFGla~~~~~----~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDV~SfGvll~eLltg~~p~~~~~~~~ 533 (692)
+++||+|||.+..... +.........|||.|+|||...++. .+.+-||||+||+||-|+.|+.||-...
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--- 323 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--- 323 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch---
Confidence 9999999999875421 1112223468999999999876632 3457899999999999999999996321
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.....++|....+. -+.. .+..+++.+|++++|++||++|.+ |..|+.++|....
T Consensus 324 ----~~~l~~KIvn~pL~-------fP~~----pe~~e~~kDli~~lL~KdP~~Ri~-------l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 ----ELELFDKIVNDPLE-------FPEN----PEINEDLKDLIKRLLEKDPEQRIT-------LPDIKLHPWVTRD 378 (576)
T ss_pred ----HHHHHHHHhcCccc-------CCCc----ccccHHHHHHHHHHhhcChhheee-------hhhheecceeccC
Confidence 11223333332111 1111 134567889999999999999999 4555688997644
No 168
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-36 Score=313.96 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=200.9
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-----chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-----TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
++|...+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999864 57899999987542 1234578899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
|+||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999998764 458899999999999999999999 4999999999999999999999999999875332
Q ss_pred CCCccc--ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSHIS--TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~~~--~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
...... ....++..|+|||++.+..++.++||||||+++|||++|+.||...... .............
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~---- 226 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQPTNP---- 226 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHHhccCCCC----
Confidence 211111 3346788999999999989999999999999999999999998633211 1111111111111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+......+.+++.+||+.+|++||++.|+++
T Consensus 227 --------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 227 --------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred --------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 011123356889999999999999999999874
No 169
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.8e-37 Score=323.46 Aligned_cols=256 Identities=26% Similarity=0.371 Sum_probs=204.4
Q ss_pred hccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~ 395 (692)
.++|+..+.||+|+||.||++... ++..||+|.+.... ....++|.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888999999999999999863 45789999987553 33456799999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcc--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 005536 396 ILVYEFMPNGTLCQHLQRER--------------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSN 455 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~N 455 (692)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ ++++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 99999999999999997532 1247889999999999999999998 599999999999
Q ss_pred eEEcCCCceEEeeecCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcc
Q 005536 456 ILLDYNYRSKVADFGLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHS 533 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~ 533 (692)
||+++++.+||+|||+++....... ........+..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999875322211 11222345678999999998899999999999999999998 7777642211
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
......+..+..... +.....++.+|+.+||+.+|++||++.|+++.|++
T Consensus 239 -----~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 -----EEVIYYVRDGNVLSC------------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----HHHHHHHhcCCCCCC------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 112233333322111 11233578999999999999999999999999874
No 170
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.3e-37 Score=317.61 Aligned_cols=257 Identities=26% Similarity=0.378 Sum_probs=205.9
Q ss_pred ccCccceeecccccEEEEEEEEeCC----CEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHND----DWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
++|...+.||+|+||.||+|...+. ..|+||...... ....+.|.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4577888999999999999986543 468999887654 4456789999999999999999999998865 557899
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999997643 358999999999999999999998 49999999999999999999999999999764433
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.........++..|+|||.+....++.++||||||+++|||++ |+.||...... .....+..+.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-------~~~~~~~~~~~~~~---- 229 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-------DVIGRIENGERLPM---- 229 (270)
T ss_pred cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCcCCC----
Confidence 2222233345678999999988889999999999999999996 99998643221 11122222211110
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+......+.+++.+|+..+|++|||+.++++.|+.++..
T Consensus 230 --------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 230 --------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 112335788999999999999999999999999998653
No 171
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=298.76 Aligned_cols=262 Identities=21% Similarity=0.324 Sum_probs=210.1
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----ee
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----EP 395 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~~ 395 (692)
-.++|.+.++||+|||+-||.++ +.++..+|+|++.....++.+..++|++..++++||||++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999998 6778899999999888888899999999999999999999999876443 58
Q ss_pred EEEEEeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 396 ILVYEFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
||+++|...|+|.+++.... +..+++.+.++|+.++++||++||+.. +++.||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999998653 346999999999999999999999963 569999999999999999999999999987
Q ss_pred cCCCC--CCcc------cccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHH
Q 005536 474 LGMTE--SSHI------STAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI 542 (692)
Q Consensus 474 ~~~~~--~~~~------~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~ 542 (692)
..... ..+. .....-|..|.|||.+. +...++++|||||||+||+|+.|..||+..-..
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---------- 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---------- 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----------
Confidence 53221 1110 11234689999999874 456889999999999999999999999732211
Q ss_pred HHhccCcc-cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 543 DRIGRGCV-DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 543 ~~~~~~~~-~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
.|.+ ..+....+.-.. .....+.+.+|+.+||+.||.+||++.+++..++.+
T Consensus 248 ----GgSlaLAv~n~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 ----GGSLALAVQNAQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----CCeEEEeeeccccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111 111121111100 112557889999999999999999999999988875
No 172
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-37 Score=335.57 Aligned_cols=262 Identities=25% Similarity=0.345 Sum_probs=198.3
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----eeE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----EPI 396 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~~~ 396 (692)
+|+..++||+|+||+||+++. .+++.||||++... +....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999986 46889999998653 2345567899999999999999999999998776 789
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+|+||+. ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 6888887653 458999999999999999999999 499999999999999999999999999998643
Q ss_pred CCCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc---
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE--- 552 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e--- 552 (692)
...........+|+.|+|||++.+. .++.++||||||+++|||++|+.||....+..... ...+.++.....+
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLD---LITDLLGTPSLEAMRS 231 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHH---HHHHHcCCCCHHHHHH
Confidence 3333333445689999999998764 57899999999999999999999997544322111 1111111000000
Q ss_pred --------cccccC-Cc---CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 553 --------IIDPYL-EP---HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 553 --------i~d~~l-~~---~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+..... .+ ..........+++.+|+.+||+.||++|||+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 286 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADAL 286 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHh
Confidence 000000 00 00000112245788999999999999999999887
No 173
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.3e-37 Score=314.69 Aligned_cols=249 Identities=24% Similarity=0.388 Sum_probs=204.1
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..++||+|+||+||+++.. +++.||+|++... .....+++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999854 5789999998753 234556899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..++.++.|++.||+|||+ .+++|+||+|+|||++.++.++|+|||++....... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-E 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-h
Confidence 999999999987655568999999999999999999998 499999999999999999999999999997533221 1
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......|++.|+|||++.+..++.++||||||++++||++|+.|+..... ... ...+..+.....
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~-~~~~~~~~~~~~-------- 221 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM------KNL-VLKIIRGSYPPV-------- 221 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH------HHH-HHHHhcCCCCCC--------
Confidence 22334588999999999988999999999999999999999999863321 111 222222221111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||+|.||++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 ----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ----cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1123457889999999999999999999985
No 174
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-36 Score=331.64 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=198.5
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||||.+.... ....+.+.+|++++.+++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999854 47899999986432 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC-
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE- 478 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~- 478 (692)
||+++|+|.+++... ..+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999999764 458889999999999999999999 49999999999999999999999999997421100
Q ss_pred -----------------------------------------CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHH
Q 005536 479 -----------------------------------------SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLI 517 (692)
Q Consensus 479 -----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~ 517 (692)
.........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000012346999999999999999999999999999999
Q ss_pred HHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCC---CHHHH
Q 005536 518 EIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRP---TMMEV 594 (692)
Q Consensus 518 eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP---sm~eV 594 (692)
||++|+.||....+... ...+...... ...+ .. .....++.+++.+|+ .+|.+|+ ++.|+
T Consensus 236 ell~G~~Pf~~~~~~~~-------~~~i~~~~~~-~~~~----~~----~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPAET-------QLKVINWETT-LHIP----SQ----AKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCHHHH-------HHHHhccCcc-ccCC----CC----CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999975432111 1111111100 0000 00 112345677888876 4999999 76666
Q ss_pred HHHHHhhhhcccccc
Q 005536 595 AEELEHIRVSSWASN 609 (692)
Q Consensus 595 l~~L~~i~~~~~~~~ 609 (692)
+ .++|...
T Consensus 299 l-------~h~~~~~ 306 (376)
T cd05598 299 K-------AHPFFKG 306 (376)
T ss_pred h-------CCCCcCC
Confidence 5 6677654
No 175
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.3e-37 Score=314.72 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=197.9
Q ss_pred eeecccccEEEEEEEEeC-C---CEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-D---DWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
++||+|+||.||+|+... + ..+|+|.+..... ...+++.+|++++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997533 2 5799999876543 35678999999999999999999999875 4568999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc--
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI-- 482 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~-- 482 (692)
++|.+++.... .+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999998653 68999999999999999999998 499999999999999999999999999998643322211
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+..+...+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~--------- 218 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-------AEVIAMLESGERLP--------- 218 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHcCCcCC---------
Confidence 112234568999999998899999999999999999998 8998864321 11222232221111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.+......+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 219 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 ---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11123357889999999999999999999999998864
No 176
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.8e-37 Score=319.83 Aligned_cols=262 Identities=24% Similarity=0.342 Sum_probs=194.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhC---CCCCeeeeEEEEEeC-----C
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSV---SHPNLLRLLGCCIEE-----G 393 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l---~H~niv~l~g~~~~~-----~ 393 (692)
+|+..+.||+|+||+||+++.. +++.||+|.++.... .....+.+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999865 578999999875422 2234566777777665 699999999988642 4
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++||||++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999996 5899998876555699999999999999999999994 99999999999999999999999999997
Q ss_pred cCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc-
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE- 552 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e- 552 (692)
..... .......||..|+|||++.+..++.++||||||+++|||++|++||........ .......+......+
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 157 IYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGLPPEDDW 231 (288)
T ss_pred cccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH---HHHHHHHhCCCChhhC
Confidence 63221 222345689999999999888999999999999999999999999864322111 111111111000000
Q ss_pred ---------cccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 553 ---------IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 553 ---------i~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.+..............+++.+|+.+||+.||++|||+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 0000000000011112345678999999999999999998887
No 177
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.7e-37 Score=328.49 Aligned_cols=258 Identities=24% Similarity=0.334 Sum_probs=203.4
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~ 399 (692)
+|+..+.||+|+||+||+++.. +++.||+|+++.. .....+.+..|..++..+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999864 5789999999753 2334567888999998886 577888999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999999998764 458999999999999999999999 499999999999999999999999999987532221
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||....+ ....+.+.++...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~-------- 219 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVS-------- 219 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--------
Confidence 222345689999999999988999999999999999999999999864322 1112222222110
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.+.....++.+++.+||+.+|.+|++..+. ..++++.++|....
T Consensus 220 -----~p~~~~~~~~~li~~~l~~~p~~R~~~~~~--~~~~i~~h~~f~~~ 263 (323)
T cd05615 220 -----YPKSLSKEAVSICKGLMTKHPSKRLGCGPE--GERDIREHAFFRRI 263 (323)
T ss_pred -----CCccCCHHHHHHHHHHcccCHhhCCCCCCC--CHHHHhcCcccCCC
Confidence 011223467899999999999999986432 23456677776544
No 178
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1e-36 Score=332.25 Aligned_cols=257 Identities=22% Similarity=0.295 Sum_probs=199.1
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|...++||+|+||+||+++. .+++.||||++... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688899999999999999985 45789999998653 2334567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999764 458899999999999999999999 499999999999999999999999999986321100
Q ss_pred C------------c----------------------------------ccccCCCCCCCCCccccccCCCCCccceeehh
Q 005536 480 S------------H----------------------------------ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFG 513 (692)
Q Consensus 480 ~------------~----------------------------------~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfG 513 (692)
. . ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0 0 00124699999999999988999999999999
Q ss_pred HHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCC---CC
Q 005536 514 VVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMR---PT 590 (692)
Q Consensus 514 vll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~R---Ps 590 (692)
|+||||++|+.||....+.. ....+..... .+.-+ .. .....++.+|+.+||+ +|.+| ++
T Consensus 236 vil~elltG~~Pf~~~~~~~-------~~~~i~~~~~-~~~~p----~~----~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHE-------TYRKIINWRE-TLYFP----DD----IHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHH-------HHHHHHccCC-ccCCC----CC----CCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 99999999999996433211 1112211100 00000 00 0123467899999998 66665 58
Q ss_pred HHHHHHHHHhhhhcccccc
Q 005536 591 MMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 591 m~eVl~~L~~i~~~~~~~~ 609 (692)
+.|++ .++|..+
T Consensus 299 ~~~~l-------~hp~~~~ 310 (377)
T cd05629 299 AHEIK-------SHPFFRG 310 (377)
T ss_pred HHHHh-------cCCCcCC
Confidence 77776 5666553
No 179
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.3e-37 Score=328.25 Aligned_cols=251 Identities=28% Similarity=0.370 Sum_probs=196.9
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHH-HHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIK-LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~-il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||+|++... .....+++..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999854 5889999999754 2234455666665 46779999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTT 154 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcc
Confidence 9999988754 458999999999999999999999 49999999999999999999999999998753221 22234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.+..+... +.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-------~~~~~~~~~~~~--~~~-------- 217 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-------EMYDNILHKPLV--LRP-------- 217 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-------HHHHHHHcCCcc--CCC--------
Confidence 457999999999999999999999999999999999999998643211 112222222110 011
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.....+.+++.+||+.+|.+||++.+. ++++..++|...
T Consensus 218 ---~~~~~~~~ll~~ll~~~p~~R~~~~~~---~~~i~~h~~f~~ 256 (325)
T cd05604 218 ---GASLTAWSILEELLEKDRQRRLGAKED---FLEIQEHPFFES 256 (325)
T ss_pred ---CCCHHHHHHHHHHhccCHHhcCCCCCC---HHHHhcCCCcCC
Confidence 123467899999999999999998644 344556666653
No 180
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.7e-37 Score=313.88 Aligned_cols=248 Identities=31% Similarity=0.473 Sum_probs=203.8
Q ss_pred eeecccccEEEEEEEEeC----CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||.||++.... +..|++|.++..... ..+++.+|+++++.++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999764 778999999866433 378899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 405 GTLCQHLQRER-------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 405 gsL~~~l~~~~-------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
++|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998752 3569999999999999999999999 5999999999999999999999999999986443
Q ss_pred CC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.. ........++..|+|||.+....++.++||||||+++|||++ |+.|+..... ....+.+..+....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~--- 227 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-------EEVLEYLRKGYRLP--- 227 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCC---
Confidence 22 122344567899999999988899999999999999999999 5888864421 11233333221111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.+.....++.+++.+||+.+|++||++.|+++.|+
T Consensus 228 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 ---------KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---------CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11122457889999999999999999999998874
No 181
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.7e-37 Score=333.76 Aligned_cols=257 Identities=22% Similarity=0.302 Sum_probs=197.1
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.|...++||+|+||+||+++.. +++.||+|++.... ....+.+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999864 57889999997542 2345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC-
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES- 479 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~- 479 (692)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999764 4588899999999999999999994 99999999999999999999999999975311000
Q ss_pred ---------------------------------------------CcccccCCCCCCCCCccccccCCCCCccceeehhH
Q 005536 480 ---------------------------------------------SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGV 514 (692)
Q Consensus 480 ---------------------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGv 514 (692)
........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00012246899999999999999999999999999
Q ss_pred HHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCC---H
Q 005536 515 VLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPT---M 591 (692)
Q Consensus 515 ll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs---m 591 (692)
+||||++|+.||....+.. . ...+..... ....+ .. .....++.+++.+++ .+|++|++ +
T Consensus 237 il~elltG~~Pf~~~~~~~------~-~~~i~~~~~-~~~~p----~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLE------T-QMKVINWQT-SLHIP----PQ----AKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHHhCCCCCCCCCHHH------H-HHHHHccCC-CcCCC----Cc----ccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999997543211 1 111111000 00000 00 112345677777776 49999987 5
Q ss_pred HHHHHHHHhhhhccccccc
Q 005536 592 MEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 592 ~eVl~~L~~i~~~~~~~~~ 610 (692)
.|++ .++|....
T Consensus 300 ~ei~-------~hp~f~~~ 311 (382)
T cd05625 300 DEIK-------AHPFFKTI 311 (382)
T ss_pred HHHh-------cCCCcCCc
Confidence 5443 56676543
No 182
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.3e-37 Score=325.69 Aligned_cols=269 Identities=21% Similarity=0.300 Sum_probs=202.0
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|...++||+|+||+||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999865 57789999997543 23345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++ ++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++...... .
T Consensus 86 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 159 (309)
T cd07872 86 LD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-K 159 (309)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCc-c
Confidence 96 5888888654 3458999999999999999999999 599999999999999999999999999997532221 2
Q ss_pred ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc---cc------
Q 005536 482 ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC---VD------ 551 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~------ 551 (692)
......+|+.|+|||.+.+ ..++.++||||||+++|||+||+.||......+.... ....+.... ..
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGISSND 236 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCCHHHHhhhcchh
Confidence 2233467999999998764 4688999999999999999999999975443222111 111111000 00
Q ss_pred ccccccCCcCCC----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 552 EIIDPYLEPHRD----AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 552 ei~d~~l~~~~~----~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
+..+........ ........++.+|+.+||+.||.+|||+.|++ .++|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l-------~h~~~~ 290 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM-------KHAYFR 290 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh-------cChhhh
Confidence 000000000000 00012335678999999999999999998887 466765
No 183
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.9e-37 Score=325.92 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=195.8
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||.||+++.. +++.||+|.++... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999865 47899999997542 23455677888888765 899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCcee
Confidence 9999998764 458999999999999999999999 49999999999999999999999999998742211 12234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+..+. +.+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-------~~~~~~~~~~~------~~~~----- 216 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-------DELFESIRVDT------PHYP----- 216 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC------CCCC-----
Confidence 45799999999999999999999999999999999999999964321 11122222211 1010
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.....++.+|+.+||+.||++||++.+ .++.++|...
T Consensus 217 --~~~~~~~~~li~~~l~~dP~~R~~~~~------~~~~h~~f~~ 253 (316)
T cd05620 217 --RWITKESKDILEKLFERDPTRRLGVVG------NIRGHPFFKT 253 (316)
T ss_pred --CCCCHHHHHHHHHHccCCHHHcCCChH------HHHcCCCcCC
Confidence 112346789999999999999999742 2345666543
No 184
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.6e-36 Score=319.35 Aligned_cols=263 Identities=26% Similarity=0.367 Sum_probs=200.9
Q ss_pred hccCccceeecccccEEEEEEEEe-----------------CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-----------------NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLR 384 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~ 384 (692)
.++|+..++||+|+||+||++... +...||+|.++... ....++|.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356888999999999999998532 23468999997543 344578999999999999999999
Q ss_pred eEEEEEeCCeeEEEEEeCCCCCHHHHHhhccC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 005536 385 LLGCCIEEGEPILVYEFMPNGTLCQHLQRERG---------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSN 455 (692)
Q Consensus 385 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~N 455 (692)
+++++.+.+..++||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 99999999999999999999999999976431 2377889999999999999999994 99999999999
Q ss_pred eEEcCCCceEEeeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh--CCcccCCCCCc
Q 005536 456 ILLDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT--ALKVVDFSRPH 532 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt--g~~p~~~~~~~ 532 (692)
||+++++.+||+|||+++........ ......++..|++||......++.++||||||+++|||++ |..|+......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999754322211 1222345678999999888899999999999999999998 55666432221
Q ss_pred ccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
.. .............. ...+ .+......+.+|+.+||+.+|++||+|.||++.|++
T Consensus 241 ~~---~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 QV---IENTGEFFRDQGRQ-VYLP--------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH---HHHHHHHHhhcccc-ccCC--------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11 11111111110000 0000 011233578899999999999999999999998864
No 185
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-36 Score=321.87 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=200.2
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..++||+|+||.||+++.. ++..+|+|.++... ....+++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999864 47788999887543 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ..+++..+..++.|+++||+|||+. .+++||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999765 4589999999999999999999973 48999999999999999999999999998753221
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc----------
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD---------- 551 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 551 (692)
......|+..|+|||.+.+..++.++||||||+++|||++|+.|+....... ...............
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCC
Confidence 1234468999999999988889999999999999999999999986432111 000000000000000
Q ss_pred ----------ccccccCCcCCCcc-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 552 ----------EIIDPYLEPHRDAW-TLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 552 ----------ei~d~~l~~~~~~~-~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
++.+.......... ......++.+++.+||+.+|++||++.||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000000000 0012346889999999999999999988873
No 186
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.4e-36 Score=314.99 Aligned_cols=252 Identities=25% Similarity=0.318 Sum_probs=192.7
Q ss_pred eeecccccEEEEEEEEeC---CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN---DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.||+|+||.||+|+..+ +..+|+|.++... .....+|.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 369999999999998654 3569999987653 234457899999999999999999999999999999999999999
Q ss_pred CHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc-
Q 005536 406 TLCQHLQRERG---SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH- 481 (692)
Q Consensus 406 sL~~~l~~~~~---~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~- 481 (692)
+|.+++..... ..+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 246788888999999999999999 49999999999999999999999999999753322211
Q ss_pred ccccCCCCCCCCCccccccC-------CCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF-------HLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
......++..|+|||++... .++.++||||||+++|||++ |+.||........ ....+ .+....+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~------~~~~~-~~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV------LTYTV-REQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH------HHHHh-hcccCCC
Confidence 12234578899999987642 35789999999999999996 9989864332111 01111 1111122
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.++.+. ....+.+.+|+.+|+ .+|++|||++||++.|+
T Consensus 231 ~~~~~~-------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK-------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC-------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 222211 112345778999998 58999999999998875
No 187
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.7e-36 Score=316.17 Aligned_cols=263 Identities=22% Similarity=0.354 Sum_probs=206.3
Q ss_pred ccCccceeecccccEEEEEEEEe-----CCCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEe--CCee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-----NDDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIE--EGEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~--~~~~ 395 (692)
+.|...+.||+|+||.||++++. ++..||||.++..... ..++|.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34666789999999999999864 2578999999865443 56789999999999999999999999887 5578
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999998653 359999999999999999999998 49999999999999999999999999999864
Q ss_pred CCCCC--cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccc--------cHHHHHHHHh
Q 005536 476 MTESS--HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEV--------NLAALAIDRI 545 (692)
Q Consensus 476 ~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~--------~~~~~~~~~~ 545 (692)
..... .......++..|++||.+.+..++.++||||||+++|||++|+.|+......... .......+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 42211 1112234567799999998889999999999999999999999887532211100 0011112222
Q ss_pred ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 546 ~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
..+... ..+.....++.+|+.+||+.+|++||+|.||+++|+.|+
T Consensus 240 ~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGERL------------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCCcC------------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 211100 001123367899999999999999999999999999874
No 188
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.1e-36 Score=316.85 Aligned_cols=255 Identities=21% Similarity=0.258 Sum_probs=201.7
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
|+..+.||+|+||+||++... +++.||+|.+.... ....+.+.+|+.++++++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677789999999999999864 57899999987542 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..++.++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 999999999976555569999999999999999999998 599999999999999999999999999987533222
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.................... ..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~--------- 223 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ----EE--------- 223 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh----hh---------
Confidence 12334789999999999998999999999999999999999999974332111111111111000 00
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHhhhhccccc
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPT-----MMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs-----m~eVl~~L~~i~~~~~~~ 608 (692)
........+.+|+.+||+.+|++||| ++|++ .++|..
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~-------~h~~~~ 265 (285)
T cd05630 224 ---YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVK-------EHPLFK 265 (285)
T ss_pred ---cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHH-------cChhhh
Confidence 01112346789999999999999999 55555 566654
No 189
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-36 Score=329.25 Aligned_cols=257 Identities=20% Similarity=0.244 Sum_probs=200.0
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~ 391 (692)
..+++...++|+..+.||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4556666789999999999999999999865 4788999998642 22344567899999999999999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
.+..++||||+++|+|.+++... .++...+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999998653 37888899999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccC----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYF----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
++..............||+.|+|||++... .++.++|||||||+||||++|+.||..... .. ....+..
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~-~~~~i~~ 261 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VG-TYSKIMN 261 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HH-HHHHHHc
Confidence 986433322233456799999999998654 378899999999999999999999974322 11 1222221
Q ss_pred C-cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHH
Q 005536 548 G-CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDM--RPTMMEVA 595 (692)
Q Consensus 548 ~-~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~--RPsm~eVl 595 (692)
. ....+.+ .......+.+|+.+||+.++.+ ||++.|++
T Consensus 262 ~~~~~~~~~----------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~ 302 (371)
T cd05622 262 HKNSLTFPD----------DNDISKEAKNLICAFLTDREVRLGRNGVEEIK 302 (371)
T ss_pred CCCcccCCC----------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHh
Confidence 1 1111111 0123356788999999844433 67766665
No 190
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-36 Score=318.81 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=203.9
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+|+..+.||+|+||.||+|+. .+++.|++|.+........+.+.+|+.+++.++|+||+++++.+......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35788889999999999999985 45789999999876666678899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... .+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++....... .
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~ 171 (296)
T cd06654 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S 171 (296)
T ss_pred cCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc-c
Confidence 9999999998643 48999999999999999999999 499999999999999999999999999987532221 1
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......+++.|+|||++.+..++.++||||||+++|||++|+.||....+... .......+ ...+..
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~------ 238 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNG-TPELQN------ 238 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh------HHHHhcCC-CCCCCC------
Confidence 22334688999999999888899999999999999999999999964432111 11111111 111100
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||++.||++
T Consensus 239 ----~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 ----PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1123356889999999999999999999984
No 191
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.1e-36 Score=313.01 Aligned_cols=250 Identities=27% Similarity=0.422 Sum_probs=206.1
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||.++. .+++.+++|.+... +....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 578889999999999998884 45788999998754 345567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999876556689999999999999999999984 999999999999999999999999999986433322
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......+++.|+|||++.+..++.++||||||+++|||++|+.||+..... .....+..+......
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~------- 222 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-------NLVVKIVQGNYTPVV------- 222 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCCCCCc-------
Confidence 234456899999999998888999999999999999999999998643221 112222223222111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
.....++.+++.+||+.+|++||++.|+++.
T Consensus 223 -----~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 -----SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -----cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1233568899999999999999999999864
No 192
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-36 Score=329.38 Aligned_cols=268 Identities=23% Similarity=0.320 Sum_probs=200.1
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC----
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG---- 393 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~---- 393 (692)
...++|+..+.||+|+||.||+++.. ++..||||++... .....+++.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999864 4789999999643 3345667889999999999999999999986543
Q ss_pred --eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 394 --EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 394 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
..++||||++ ++|.+.++. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 98 FQDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 4799999996 567676643 37889999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc-----
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG----- 546 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~----- 546 (692)
++.... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .....+.+.
T Consensus 170 a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~ 244 (359)
T cd07876 170 ARTACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ---WNKVIEQLGTPSAE 244 (359)
T ss_pred cccccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCcHH
Confidence 975322 2223445789999999999999999999999999999999999999974432110 000111100
Q ss_pred -------------cC-------cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 547 -------------RG-------CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 547 -------------~~-------~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
.. ...+.......+...........++.+|+.+||+.||++|||+.|++ .++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l-------~hp~ 317 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL-------RHPY 317 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh-------cCch
Confidence 00 00000000000000001111235678999999999999999999987 4666
Q ss_pred cc
Q 005536 607 AS 608 (692)
Q Consensus 607 ~~ 608 (692)
..
T Consensus 318 ~~ 319 (359)
T cd07876 318 IT 319 (359)
T ss_pred hh
Confidence 54
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.5e-37 Score=326.83 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=208.1
Q ss_pred HHHhhccCccceeecccccEEEEEEEEeC--------CCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEE
Q 005536 319 IEKATSFFSEKHRLGTGAYGTVYAGKLHN--------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGC 388 (692)
Q Consensus 319 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~ 388 (692)
++....+|...+.||+|+||.||+++... ...||+|.++... ....+++.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 33344578889999999999999997422 2368999887542 34567899999999999 79999999999
Q ss_pred EEeCCeeEEEEEeCCCCCHHHHHhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 005536 389 CIEEGEPILVYEFMPNGTLCQHLQRER--------------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSS 454 (692)
Q Consensus 389 ~~~~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~ 454 (692)
+.+.+..+++|||+++|+|.+++.... ...++|..++.++.|++.||+|||+ ++|+||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccc
Confidence 999999999999999999999997542 2348899999999999999999999 49999999999
Q ss_pred ceEEcCCCceEEeeecCCccCCCCCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCc
Q 005536 455 NILLDYNYRSKVADFGLSRLGMTESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPH 532 (692)
Q Consensus 455 NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~ 532 (692)
|||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 242 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV- 242 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 999999999999999999753322111 1222345678999999999899999999999999999998 7777753221
Q ss_pred ccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 533 SEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
......+..+...+. +.....++.+|+.+||+.+|++||+|.|+++.|+++...
T Consensus 243 ------~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 243 ------EELFKLLKEGHRMDK------------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred ------HHHHHHHHcCCCCCC------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 112223322211111 112235788999999999999999999999999998743
No 194
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.2e-36 Score=314.71 Aligned_cols=239 Identities=23% Similarity=0.357 Sum_probs=189.2
Q ss_pred eeecccccEEEEEEEEeCC-------------CEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 330 HRLGTGAYGTVYAGKLHND-------------DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~-------------~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
+.||+|+||.||+|++.+. ..|++|.+..........|.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 3689999999999985432 258999887665556668899999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc-------eEEeee
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR-------SKVADF 469 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~-------~kl~DF 469 (692)
+||||+++++|..++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++. +|++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999998887543 458999999999999999999998 59999999999999987664 899999
Q ss_pred cCCccCCCCCCcccccCCCCCCCCCccccc-cCCCCCccceeehhHHHHHHH-hCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 470 GLSRLGMTESSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEII-TALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 470 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDV~SfGvll~eLl-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
|++...... ....++..|+|||++. +..++.++||||||+++|||+ +|+.|+......+ ...+..
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--------~~~~~~ 223 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--------KERFYE 223 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--------HHHHHh
Confidence 998753221 2345788999999886 467899999999999999998 5777765322111 011111
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
+... .. .....++.+|+.+||+.+|++||++.+|++.|
T Consensus 224 ~~~~-~~------------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQCM-LV------------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cCcc-CC------------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1100 00 01235688999999999999999999999876
No 195
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.5e-37 Score=319.34 Aligned_cols=260 Identities=19% Similarity=0.231 Sum_probs=204.4
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
|+..+.||+|+||+||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++.+++.+++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999864 57899999987542 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.......+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++...... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--E 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--C
Confidence 999999999876555569999999999999999999998 49999999999999999999999999998753221 1
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......|+..|+|||++.+..++.++||||||+++|||++|+.||........ .......+.++.. .
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~~~~~~~--~-------- 223 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRRVLETEE--V-------- 223 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhhhcccc--c--------
Confidence 12344789999999999988999999999999999999999999864322111 1111122221110 0
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
........+.+|+.+||+.+|++||++.|.. .+++..++|..
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~--~~~l~~~~~~~ 265 (285)
T cd05632 224 ---YSAKFSEEAKSICKMLLTKDPKQRLGCQEEG--AGEVKRHPFFR 265 (285)
T ss_pred ---cCccCCHHHHHHHHHHccCCHhHcCCCcccC--hHHHHcChhhh
Confidence 1112234678999999999999999965442 44555566654
No 196
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1e-36 Score=314.23 Aligned_cols=250 Identities=29% Similarity=0.433 Sum_probs=194.5
Q ss_pred eeecccccEEEEEEEEeC----CCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe-CCeeEEEEEeCC
Q 005536 330 HRLGTGAYGTVYAGKLHN----DDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE-EGEPILVYEFMP 403 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~-~~~~~lV~E~~~ 403 (692)
+.||+|+||.||+|.+.+ ...||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998643 347999998643 33456789999999999999999999998764 556899999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC---
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS--- 480 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~--- 480 (692)
+|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999997643 347888889999999999999998 4999999999999999999999999999975332111
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCC-cccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITAL-KVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......++..|+|||++.+..++.++||||||+++|||++|. .|+..... .. ....+..+....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~----~~~~~~~~~~~~------- 222 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FD----ITVYLLQGRRLL------- 222 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HH----HHHHHhcCCCCC-------
Confidence 1112334677899999998889999999999999999999964 44532211 11 112222221110
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.+...+..+.+++.+||+.+|++||++.||++.|+++.
T Consensus 223 -----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 223 -----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00112356889999999999999999999999999875
No 197
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2e-36 Score=309.96 Aligned_cols=247 Identities=26% Similarity=0.450 Sum_probs=199.5
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHH
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLC 408 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~ 408 (692)
++||+|+||.||++...+++.|++|.+...... ..++|.+|++++++++|+||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998765443 5678999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc-ccCC
Q 005536 409 QHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS-TAPQ 487 (692)
Q Consensus 409 ~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~-~~~~ 487 (692)
+++.... ..+++..++.++.+++.||+|||+ ++++||||||+|||++.++.+||+|||+++.......... ....
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9997643 458999999999999999999998 5999999999999999999999999999975332111111 1223
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccC
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWT 566 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~ 566 (692)
++..|+|||.+.+..++.++||||||+++|||+| |..|+...... .....+..+.. . ..+
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-------~~~~~~~~~~~--~----------~~~ 217 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-------QTRERIESGYR--M----------PAP 217 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-------HHHHHHhcCCC--C----------CCC
Confidence 4667999999988899999999999999999999 77777533221 11122221110 0 001
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 567 LSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 567 ~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.....++.+++.+||+.+|++||++.||++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 123457899999999999999999999999886
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.3e-36 Score=313.48 Aligned_cols=248 Identities=25% Similarity=0.372 Sum_probs=198.4
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
|+..+.||+|+||.||+|.... +..+++|.+........+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 5567789999999999998754 677899998766666678899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...... .....
T Consensus 87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~~ 161 (282)
T cd06643 87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRD 161 (282)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc-ccccc
Confidence 9999888754 34699999999999999999999994 9999999999999999999999999998753222 22223
Q ss_pred cCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 485 APQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
...++..|+|||++. +..++.++|||||||++|||++|+.|+....+ ...... +.......+..+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~-~~~~~~~~~~~~--- 231 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP------MRVLLK-IAKSEPPTLAQP--- 231 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH------HHHHHH-HhhcCCCCCCCc---
Confidence 456899999999874 44577899999999999999999999863321 111111 111111111111
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.....++.+++.+||+.+|.+||++.+++
T Consensus 232 -------~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 232 -------SRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred -------cccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11235788999999999999999998876
No 199
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-36 Score=327.55 Aligned_cols=260 Identities=26% Similarity=0.350 Sum_probs=203.2
Q ss_pred hccCccceeecccccEEEEEEEE------eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC-C
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL------HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE-G 393 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~-~ 393 (692)
.++|+..+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788899999999999999973 346789999997543 33456788999999999 689999999988654 4
Q ss_pred eeEEEEEeCCCCCHHHHHhhccC---------------------------------------------------------
Q 005536 394 EPILVYEFMPNGTLCQHLQRERG--------------------------------------------------------- 416 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 416 (692)
..++||||+++|+|.++++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999999875321
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc-ccccCC
Q 005536 417 --------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH-ISTAPQ 487 (692)
Q Consensus 417 --------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~ 487 (692)
..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++........ ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 237888899999999999999999 49999999999999999999999999999764322111 112334
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccC
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWT 566 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~ 566 (692)
++..|+|||.+.+..++.++||||||+++|||++ |..|+...... ......+.++..... +
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--~---------- 304 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRMRA--P---------- 304 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc------HHHHHHHhccCCCCC--C----------
Confidence 6678999999988899999999999999999997 88887543221 112222332221111 0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 567 LSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 567 ~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
.....++.+++.+||+.+|++||++.||++.|+.+..
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0112468899999999999999999999999998754
No 200
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-36 Score=328.40 Aligned_cols=267 Identities=23% Similarity=0.304 Sum_probs=200.4
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC------
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE------ 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~------ 392 (692)
..++|...+.||+|+||.||++... .++.||||++... +....+++.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999854 4788999999753 234456788999999999999999999987543
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999995 577777753 38899999999999999999999 59999999999999999999999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc-----
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR----- 547 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 547 (692)
+.... ........||..|+|||++.+..++.++||||||+++|||++|+.||........ .......+..
T Consensus 174 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~ 248 (364)
T cd07875 174 RTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ---WNKVIEQLGTPCPEF 248 (364)
T ss_pred cccCC--CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHH
Confidence 85322 2222445789999999999999999999999999999999999999964432111 1111111110
Q ss_pred -------------Cc-------ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccc
Q 005536 548 -------------GC-------VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWA 607 (692)
Q Consensus 548 -------------~~-------~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~ 607 (692)
.. ..++....+.+............+.+|+.+||+.||++|||+.|++ .++|.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L-------~hp~~ 321 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL-------QHPYI 321 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh-------cCccc
Confidence 00 0000000000000011111235678999999999999999998886 56666
Q ss_pred c
Q 005536 608 S 608 (692)
Q Consensus 608 ~ 608 (692)
.
T Consensus 322 ~ 322 (364)
T cd07875 322 N 322 (364)
T ss_pred c
Confidence 4
No 201
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.9e-36 Score=310.69 Aligned_cols=249 Identities=25% Similarity=0.390 Sum_probs=203.3
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
++|+..+.||+|+||.||+++..+ ++.|++|.+..... .+++.+|++++++++|+||+++++++.+.+..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578888999999999999999765 78999999875432 778999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||++....... ..
T Consensus 81 ~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-~~ 155 (256)
T cd06612 81 GAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-AK 155 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc-cc
Confidence 999999998754 35689999999999999999999984 99999999999999999999999999987643222 12
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....++..|+|||++.+..++.++||||||+++|||++|+.|+....+... ...+..... +.+
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~-----~~~---- 219 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-------IFMIPNKPP-----PTL---- 219 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-------hhhhccCCC-----CCC----
Confidence 2344588999999999988999999999999999999999999874322111 111111000 000
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+......+.+++.+||+.+|++||++.||++
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 -SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 011123357889999999999999999999873
No 202
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=309.38 Aligned_cols=265 Identities=24% Similarity=0.324 Sum_probs=203.7
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCch--hHHHHHHHHHHHHhCCCCC-eeeeEEEEEeCC------
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPN-LLRLLGCCIEEG------ 393 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~n-iv~l~g~~~~~~------ 393 (692)
..|...++||+|.||+||+|+. .+|+.||+|+++....+ .-....+|+.+|++++|+| |+.|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3456667799999999999984 56889999999876442 2345689999999999999 999999998877
Q ss_pred eeEEEEEeCCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 394 EPILVYEFMPNGTLCQHLQRERG--SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
..++|+||+ .-+|.+++..... ..++...+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 789999999 6799999987653 3577788999999999999999995 999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC--
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG-- 548 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 548 (692)
|+.... .....+..++|..|.|||++.+. .|+...||||+|++++||++++.-|..... ........+.++.-
T Consensus 167 Ara~~i-p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 167 ARAFSI-PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIFRLLGTPNE 242 (323)
T ss_pred HHHhcC-CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHHcCCCCc
Confidence 985332 22334666789999999998776 799999999999999999999988876544 22233333333321
Q ss_pred -cccccc-cccCCcCCCccC------H---HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 549 -CVDEII-DPYLEPHRDAWT------L---SSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 549 -~~~ei~-d~~l~~~~~~~~------~---~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
....+. -+........+. . .......+++.+||+.+|.+|.|++.+++
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 111111 001110111111 1 11136789999999999999999998874
No 203
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.5e-37 Score=317.55 Aligned_cols=239 Identities=26% Similarity=0.394 Sum_probs=188.3
Q ss_pred eecccccEEEEEEEEeC-------------------------CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeee
Q 005536 331 RLGTGAYGTVYAGKLHN-------------------------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRL 385 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l 385 (692)
.||+|+||.||+|.+.. ...|++|.+.........+|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999998531 13589999876555556788999999999999999999
Q ss_pred EEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---
Q 005536 386 LGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY--- 462 (692)
Q Consensus 386 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~--- 462 (692)
++++.+....++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999988754 3468999999999999999999998 5999999999999997643
Q ss_pred ----ceEEeeecCCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHH-hCCcccCCCCCccccc
Q 005536 463 ----RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEII-TALKVVDFSRPHSEVN 536 (692)
Q Consensus 463 ----~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLl-tg~~p~~~~~~~~~~~ 536 (692)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.|+....+...
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-- 230 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-- 230 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH--
Confidence 4899999988642221 22357888999998865 56899999999999999995 68888864332111
Q ss_pred HHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 537 LAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 537 ~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
. . .+.... ... . .....+.+++.+||+.+|++||+|.+|++.|.
T Consensus 231 -~-~---~~~~~~-------~~~---~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 -E-R---FYEKKH-------RLP---E----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -H-H---HHHhcc-------CCC---C----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0 1 111000 000 0 11236889999999999999999999998773
No 204
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.7e-36 Score=314.97 Aligned_cols=251 Identities=25% Similarity=0.397 Sum_probs=202.0
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|+..++||+|+||.||+|+... ++.|++|.+...+....+++.+|+++++.++|+||+++++.+..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 3568888999999999999998754 788999999877667778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|..++.... ..+++..++.++.|++.+|+|||+ .+|+||||||+||+++.++.+||+|||++..... ...
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~-~~~ 165 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK-TLQ 165 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccc-ccc
Confidence 99999988876543 458999999999999999999998 4999999999999999999999999999875222 122
Q ss_pred ccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
......+++.|+|||++. ...++.++||||||+++|||++|+.|+....+ ... ...+..........
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~-~~~~~~~~~~~~~~- 237 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRV-LLKIAKSEPPTLSQ- 237 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHH-HHHHhcCCCccCCC-
Confidence 223456889999999874 44578899999999999999999999864322 111 11222211111111
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+.....++.+++.+||+.+|++||++.|++
T Consensus 238 ---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 238 ---------PSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred ---------CcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 112234678999999999999999998886
No 205
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.2e-36 Score=328.78 Aligned_cols=268 Identities=24% Similarity=0.295 Sum_probs=200.9
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE----- 392 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~----- 392 (692)
...++|...+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35678999999999999999999854 4788999999754 234456788999999999999999999988643
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 393 -GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 393 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
...++||||++ ++|.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 35799999995 577777653 38899999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc----
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR---- 547 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 547 (692)
++.... ........||+.|+|||++.+..++.++||||||+++|||++|+.||......... ....+.+..
T Consensus 166 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~ 240 (355)
T cd07874 166 ARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW---NKVIEQLGTPCPE 240 (355)
T ss_pred cccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHH
Confidence 975322 22234457899999999999989999999999999999999999998643321110 111111100
Q ss_pred --------------C--ccc-----ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 548 --------------G--CVD-----EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 548 --------------~--~~~-----ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
. ... ......+.+...........++.+|+.+||+.||++|||+.|++ .++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell-------~hp~ 313 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL-------QHPY 313 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh-------cCcc
Confidence 0 000 00000000000111112345788999999999999999999987 5666
Q ss_pred cc
Q 005536 607 AS 608 (692)
Q Consensus 607 ~~ 608 (692)
..
T Consensus 314 ~~ 315 (355)
T cd07874 314 IN 315 (355)
T ss_pred hh
Confidence 54
No 206
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5e-36 Score=310.51 Aligned_cols=253 Identities=23% Similarity=0.392 Sum_probs=202.8
Q ss_pred cCccceeecccccEEEEEEEEeC--CCEEEEEEeecC----------CchhHHHHHHHHHHHHh-CCCCCeeeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN--DDWVAIKRFRYR----------DTDSIDQVMNEIKLLSS-VSHPNLLRLLGCCIE 391 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~il~~-l~H~niv~l~g~~~~ 391 (692)
+|+..+.||+|+||.||+|+... ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999765 678999988643 12345567889998875 799999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
.+..++||||+++++|.+++... ....+++..++.++.|++.||.|||+. .+++|+||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988642 234689999999999999999999963 48999999999999999999999999
Q ss_pred cCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 470 GLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 470 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
|++....... ......|+..|++||++.+..++.++||||||+++|||++|+.|+...... .....+.++.
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-------~~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-------SLATKIVEAV 229 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-------HHHHHHhhcc
Confidence 9997643322 334556899999999999888999999999999999999999998633211 1122222221
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
...... ......+.+++.+||+.+|++||++.||..+|+
T Consensus 230 ~~~~~~-----------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPE-----------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCc-----------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111100 012356889999999999999999999999875
No 207
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-36 Score=316.93 Aligned_cols=250 Identities=25% Similarity=0.367 Sum_probs=204.1
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|+..+.||+|+||.||+++. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 46788999999999999999985 46889999999876666667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.+ ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++....... .
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~ 170 (297)
T cd06656 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S 170 (297)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc-c
Confidence 999999999864 3489999999999999999999994 99999999999999999999999999987532221 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......+++.|+|||++.+..++.++||||||+++|+|++|+.||....+..... .+..+......
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-------~~~~~~~~~~~------- 236 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPELQ------- 236 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-------eeccCCCCCCC-------
Confidence 2234468899999999998889999999999999999999999996443321110 00000000000
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+......+.+++.+||+.+|++||++.+|++
T Consensus 237 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 237 ---NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11123356789999999999999999998883
No 208
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.7e-36 Score=311.78 Aligned_cols=255 Identities=24% Similarity=0.347 Sum_probs=204.0
Q ss_pred ccCccceeecccccEEEEEEEEe------CCCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH------NDDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
++|+..+.||+|+||+||+++.. +.+.|++|.+...... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999864 2457999988754433 4678999999999999999999999999989999
Q ss_pred EEEEeCCCCCHHHHHhhccC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 397 LVYEFMPNGTLCQHLQRERG-------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999986542 258999999999999999999998 49999999999999999999999999
Q ss_pred cCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccC
Q 005536 470 GLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 470 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
|+++..............++..|++||.+.+..++.++||||||+++|||++ |..||..... ......+..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~~~~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLNRLQAG 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHHHHHcC
Confidence 9987533222222233456778999999988889999999999999999999 7777742211 1122223222
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
...... .......+.+++.+||+.+|++||++.|++++|.
T Consensus 235 ~~~~~~-----------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLELPV-----------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcCCCC-----------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 221110 0123357889999999999999999999998875
No 209
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.8e-36 Score=326.67 Aligned_cols=262 Identities=21% Similarity=0.313 Sum_probs=203.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||+++.. +++.||+|+++.. .....+.+.+|+.++.+++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 4789999999753 2334567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999764 458999999999999999999999 599999999999999999999999999986432110
Q ss_pred C----------------------------------cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcc
Q 005536 480 S----------------------------------HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKV 525 (692)
Q Consensus 480 ~----------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p 525 (692)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 001234699999999999999999999999999999999999999
Q ss_pred cCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcc
Q 005536 526 VDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 605 (692)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~ 605 (692)
|....+.. ....+........+.+. .....++.+|+.+++. +|.+|++... ++++..++
T Consensus 236 f~~~~~~~-------~~~~i~~~~~~~~~p~~---------~~~s~~~~~li~~l~~-~p~~R~~~~~----~~ei~~hp 294 (360)
T cd05627 236 FCSETPQE-------TYRKVMNWKETLVFPPE---------VPISEKAKDLILRFCT-DSENRIGSNG----VEEIKSHP 294 (360)
T ss_pred CCCCCHHH-------HHHHHHcCCCceecCCC---------CCCCHHHHHHHHHhcc-ChhhcCCCCC----HHHHhcCC
Confidence 97443311 12222211100001110 0123467788888764 9999987432 34555788
Q ss_pred cccccc
Q 005536 606 WASNIY 611 (692)
Q Consensus 606 ~~~~~~ 611 (692)
|.....
T Consensus 295 ~f~~~~ 300 (360)
T cd05627 295 FFEGVD 300 (360)
T ss_pred CCCCCC
Confidence 877554
No 210
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-36 Score=314.75 Aligned_cols=257 Identities=24% Similarity=0.395 Sum_probs=205.0
Q ss_pred ccCccceeecccccEEEEEEEEeC-CC----EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DD----WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
..|+..+.||+|+||+||+|...+ +. .||+|.++... .....++.+|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 456778899999999999998643 32 58999887553 3455789999999999999999999999987 78899
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999998653 348999999999999999999999 5999999999999999999999999999986433
Q ss_pred CCCcc-cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSHI-STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
..... .....++..|++||.+....++.++||||||+++|||++ |+.|++.... ....+.+..+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~-- 232 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-------VEIPDLLEKGERLPQ-- 232 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHHHhCCCCCCC--
Confidence 22211 112234678999999988899999999999999999999 9999864322 112223332211100
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+......+.+++.+||..+|.+||++.++++.|+++...
T Consensus 233 ----------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 233 ----------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 011224678999999999999999999999999998553
No 211
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.6e-36 Score=319.96 Aligned_cols=269 Identities=23% Similarity=0.308 Sum_probs=202.0
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+.|...++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888899999999999999865 57889999987543 33345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++ ++|.+++... ...+++..+..++.|++.||+|||+ .+|+|+||||+|||+++++.+||+|||++....... .
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~ 159 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K 159 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-C
Confidence 96 6999988764 3458999999999999999999999 499999999999999999999999999987532221 2
Q ss_pred ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc---cCcccccccc-
Q 005536 482 ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG---RGCVDEIIDP- 556 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~ei~d~- 556 (692)
......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.. ......+. ......+++.
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQL---HFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCChhhchhhhccc
Confidence 2233457899999998765 35788999999999999999999998754322111 11111111 0000111000
Q ss_pred -----cCCcCC----CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 557 -----YLEPHR----DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 557 -----~l~~~~----~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
...... ..........+.+|+.+||+.||.+|||++|++ .++|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil-------~h~~f~ 290 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM-------KHPYFH 290 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh-------cCcccc
Confidence 000000 001112345678999999999999999998887 566654
No 212
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-36 Score=316.55 Aligned_cols=263 Identities=22% Similarity=0.296 Sum_probs=197.4
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|++|.||+|+.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999865 58899999987542 23356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERG-SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~-~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
++ ++|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-V 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC-c
Confidence 96 689998876433 568999999999999999999999 49999999999999999999999999998753222 1
Q ss_pred cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC---c-------
Q 005536 481 HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG---C------- 549 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~------- 549 (692)
.......+++.|+|||.+.+. .++.++||||||+++|||+||+.||......... ......+... .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL---FRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHHHHhCCCChhhhhcchhh
Confidence 222334678999999987654 5788999999999999999999998643221110 0001111000 0
Q ss_pred --ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 --VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 --~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
....++................++.+++.+||+.||++|||+.+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 0000000000000000112345678999999999999999999887
No 213
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.6e-36 Score=314.08 Aligned_cols=249 Identities=26% Similarity=0.389 Sum_probs=197.5
Q ss_pred eeecccccEEEEEEEEeC-------CCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKLHN-------DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+.||+|+||.||+|+..+ +..+|||.+.... .....+|.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998643 2479999886543 24567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-----ceEEeeecC
Q 005536 402 MPNGTLCQHLQRER-----GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-----RSKVADFGL 471 (692)
Q Consensus 402 ~~~gsL~~~l~~~~-----~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-----~~kl~DFGl 471 (692)
+++++|.+++.... ...+++..++.++.|++.||+|||+ .+++|+||||+|||++.+. .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997542 2348899999999999999999998 4899999999999999877 899999999
Q ss_pred CccCCCCC-CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 472 SRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 472 a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
++...... ........++..|+|||++.+..++.++||||||+++|||++ |+.||..... . . ....+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~---~-~~~~~~~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---Q---E-VLQHVTAGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---H---H-HHHHHhcCC
Confidence 87533221 112223356789999999999999999999999999999998 9888853221 1 1 112222211
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
... .+......+.+++.+||+.+|++||++.+|++.|++
T Consensus 231 ~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 RLQ------------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ccC------------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 110 011234578899999999999999999999998863
No 214
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.9e-36 Score=309.74 Aligned_cols=249 Identities=25% Similarity=0.384 Sum_probs=201.8
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-CeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE-GEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~-~~~~lV~E 400 (692)
+|+..+.||+|++|.||+++.. +++.||+|++.... ....+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999864 46789999987542 34556789999999999999999999987644 46789999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++.......+++..++.++.+++.||+|||+ .+|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 9999999999987655679999999999999999999999 499999999999999999999999999997643222
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......+++.|+|||++.+..++.++||||||++++||++|+.|++.... .. ....+..+.....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~-~~~~~~~~~~~~~------- 222 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NS-LVYRIIEGKLPPM------- 222 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HH-HHHHHHhcCCCCC-------
Confidence 223345689999999999999999999999999999999999999863221 11 1122222222111
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||++.|+++
T Consensus 223 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 -----PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1123357889999999999999999999874
No 215
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.2e-36 Score=310.85 Aligned_cols=248 Identities=24% Similarity=0.355 Sum_probs=203.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..+.||.|+||.||+|+.. +++.||+|.+.... ....+.+.+|+++++.++|+||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35778889999999999999865 57899999987553 34556789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... .+++..++.++.|++.||.|||+ ++++||||+|+||++++++.++|+|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-S 153 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc-c
Confidence 9999999998754 68999999999999999999998 499999999999999999999999999997643321 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......+++.|+|||++.+..++.++||||||+++|||+||+.||....+. .....+..+...++.+.
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~----- 221 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-------RVLFLIPKNNPPSLEGN----- 221 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-------HHHHHhhhcCCCCCccc-----
Confidence 233456889999999999888999999999999999999999998643321 11222222211111110
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.....+.+++.+||..+|++||+++++++
T Consensus 222 ------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 ------KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ------ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 02346889999999999999999999874
No 216
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.4e-36 Score=309.86 Aligned_cols=252 Identities=26% Similarity=0.374 Sum_probs=190.3
Q ss_pred eeecccccEEEEEEEEeCC---CEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLHND---DWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
++||+|+||+||+|...++ ..+++|.+.... .....+|.+|+.+++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 3699999999999986543 468888876443 334567899999999999999999999999999999999999999
Q ss_pred CHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC-c
Q 005536 406 TLCQHLQRERG---SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS-H 481 (692)
Q Consensus 406 sL~~~l~~~~~---~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~-~ 481 (692)
+|.+++..... ...++...+.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999977543 235788889999999999999999 4999999999999999999999999999875322221 1
Q ss_pred ccccCCCCCCCCCcccccc-------CCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQY-------FHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~-------~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
......++..|+|||++.. ..++.++||||||+++|||++ |..|+....+. ......+..+ ...+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~-~~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVREQ-DIKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhcc-CccC
Confidence 1233356778999998643 356889999999999999999 67777533211 1111222222 1222
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.++.+. ......+.+++..|+ .+|++||+++||++.|.
T Consensus 231 ~~~~~~-------~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQLD-------LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCccc-------ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 222221 123345677888888 59999999999998873
No 217
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-36 Score=312.54 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=200.2
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
++|...+.||+|+||.||+++.. +++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999864 57899999998765556677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++... ..+++...+.++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++...... ...
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~ 162 (267)
T cd06645 89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAK 162 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc-ccc
Confidence 999999998754 4589999999999999999999994 9999999999999999999999999998753321 222
Q ss_pred cccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 483 STAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....|+..|+|||++. ...++.++||||||+++|||++|+.|+....+.... . ........ .+...
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~-~~~~~~~~---~~~~~ 232 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------F-LMTKSNFQ---PPKLK 232 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------H-hhhccCCC---CCccc
Confidence 23456899999999874 456889999999999999999999988543321111 0 11111110 00000
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
... .....+.+++.+||+.+|++||++++|++
T Consensus 233 -~~~----~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 -DKM----KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -ccC----CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000 12346789999999999999999998874
No 218
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-36 Score=312.32 Aligned_cols=251 Identities=29% Similarity=0.444 Sum_probs=199.8
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHH--HHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSID--QVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
|+..+.||+|+||+||+++... ++.||+|.+......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678899999999999999766 458999999877543332 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++... ..+++..++.++.|+++||+|||+. +|+|+||||+|||+++++.++|+|||.+... ......
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTSE
T ss_pred cccccccccccc--ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc-cccccc
Confidence 999999999833 4589999999999999999999994 9999999999999999999999999998753 222334
Q ss_pred cccCCCCCCCCCccccc-cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 483 STAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~-~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
.....++..|+|||.+. +..++.++||||+|+++|+|++|..|+........ .....+.... .........
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~- 226 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ---LEIIEKILKR----PLPSSSQQS- 226 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH---HHHHHHHHHT----HHHHHTTSH-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhh---hhhhhhcccc----ccccccccc-
Confidence 45567899999999998 88899999999999999999999999874411111 1111111110 000000000
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.....++.+++.+||+.+|++||++.+++
T Consensus 227 -----~~~~~~l~~li~~~l~~~p~~R~~~~~l~ 255 (260)
T PF00069_consen 227 -----REKSEELRDLIKKMLSKDPEQRPSAEELL 255 (260)
T ss_dssp -----TTSHHHHHHHHHHHSSSSGGGSTTHHHHH
T ss_pred -----chhHHHHHHHHHHHccCChhHCcCHHHHh
Confidence 01126889999999999999999999887
No 219
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.5e-36 Score=324.15 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=193.9
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHH-HHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIK-LLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||+||+++.. +++.||+|++.... .....++..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999865 46789999997532 222334445544 56889999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~ 154 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTS 154 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCcc
Confidence 9999999764 3478888889999999999999994 9999999999999999999999999999753222 22234
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.+...... +.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~~~~--~~--------- 216 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-------EMYDNILNKPLQ--LK--------- 216 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-------HHHHHHHhCCcC--CC---------
Confidence 457999999999999999999999999999999999999998643211 112222221110 01
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
......+.+++.+||+.+|.+||++.+.+ .++..+.|..
T Consensus 217 --~~~~~~~~~li~~~l~~~p~~R~~~~~~~---~~i~~~~~~~ 255 (325)
T cd05602 217 --PNITNSARHLLEGLLQKDRTKRLGAKDDF---MEIKNHIFFS 255 (325)
T ss_pred --CCCCHHHHHHHHHHcccCHHHCCCCCCCH---HHHhcCcccC
Confidence 12234678999999999999999987543 3444555543
No 220
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.3e-36 Score=314.27 Aligned_cols=262 Identities=23% Similarity=0.341 Sum_probs=206.2
Q ss_pred CCChHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEE
Q 005536 313 FYPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCI 390 (692)
Q Consensus 313 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~ 390 (692)
.++..++..++++|+..+.||+|+||.||++... +++.+|+|.+... ....+++.+|+.++.++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3566788888999999999999999999999864 5788999998654 23346778899999999 7999999999987
Q ss_pred eC-----CeeEEEEEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 391 EE-----GEPILVYEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 391 ~~-----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
+. +..++||||+++++|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCC
Confidence 54 3589999999999999988642 23568999999999999999999998 49999999999999999999
Q ss_pred eEEeeecCCccCCCCCCcccccCCCCCCCCCccccccC-----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHH
Q 005536 464 SKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF-----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538 (692)
Q Consensus 464 ~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~ 538 (692)
+||+|||+++...... .......|+..|+|||++... .++.++||||||+++|||++|+.|+....+..
T Consensus 167 ~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~----- 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK----- 240 (291)
T ss_pred EEEeecccchhccccc-ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-----
Confidence 9999999987533221 122345689999999987543 36889999999999999999999986432211
Q ss_pred HHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 539 ALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 539 ~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. ...+.++....+.++ ......+.+|+.+||+.+|++||++.|+++
T Consensus 241 -~-~~~~~~~~~~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 -T-LFKIPRNPPPTLLHP----------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -H-HHHHhcCCCCCCCcc----------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 112222222211111 122346889999999999999999999873
No 221
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.9e-36 Score=308.99 Aligned_cols=238 Identities=23% Similarity=0.393 Sum_probs=189.9
Q ss_pred eeecccccEEEEEEEEeCCC-----------EEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 330 HRLGTGAYGTVYAGKLHNDD-----------WVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+.||+|+||.||+|.+.+.. .|++|.+...... ...|.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36999999999999976543 4788877654333 6789999999999999999999999988 778999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-------ceEEeeecC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-------RSKVADFGL 471 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-------~~kl~DFGl 471 (692)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999998753 368999999999999999999998 5999999999999999888 799999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccC--CCCCccceeehhHHHHHHHhC-CcccCCCCCcccccHHHHHHHHhccC
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYF--HLSDKSDVYSFGVVLIEIITA-LKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDV~SfGvll~eLltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
+..... .....++..|+|||++... .++.++||||||+++|||++| ..|+........ ...+...
T Consensus 155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-------~~~~~~~ 222 (259)
T cd05037 155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-------ERFYQDQ 222 (259)
T ss_pred cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-------HHHHhcC
Confidence 975322 2234567789999998776 789999999999999999994 666643321110 1111110
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
... + ......+.+++.+||..+|++||++.||++.|+
T Consensus 223 --~~~------~------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 --HRL------P------MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --CCC------C------CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 0 001157889999999999999999999998874
No 222
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.8e-36 Score=308.25 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=205.6
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|+..+.||+|+||.||+++.. +++.+++|.+........+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357888999999999999999864 4678999999877666778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-~~ 156 (262)
T cd06613 82 CGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT-IA 156 (262)
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhh-hh
Confidence 99999999987652 458999999999999999999998 49999999999999999999999999998753321 11
Q ss_pred ccccCCCCCCCCCccccccC---CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 482 ISTAPQGTPGYLDPQYHQYF---HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~---~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
......++..|+|||.+... .++.++||||||+++|||++|+.|+....+... ...+...... .+.+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-------~~~~~~~~~~---~~~~ 226 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-------LFLISKSNFP---PPKL 226 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhccCC---Cccc
Confidence 22345688899999998776 889999999999999999999999864322111 1111111000 0000
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. .......++.+++.+||+.+|.+||++.+|+.
T Consensus 227 ~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 K-----DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c-----chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 11234467899999999999999999999873
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.6e-36 Score=313.65 Aligned_cols=262 Identities=22% Similarity=0.333 Sum_probs=203.8
Q ss_pred CChHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEe
Q 005536 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIE 391 (692)
Q Consensus 314 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~ 391 (692)
+.++.+..+.++|+..+.||+|+||.||+++.. +++.+|+|.++.. ....+++.+|+.+++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 345667788899999999999999999999864 4788999987643 23346788999999999 69999999998853
Q ss_pred -----CCeeEEEEEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 392 -----EGEPILVYEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 392 -----~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
.+..++||||+++++|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence 35689999999999999988642 23458999999999999999999999 499999999999999999999
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA 539 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~ 539 (692)
||+|||+++..... ........|++.|+|||++.. ..++.++||||||+++|||++|+.|+....+...
T Consensus 164 kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~----- 237 (286)
T cd06638 164 KLVDFGVSAQLTST-RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA----- 237 (286)
T ss_pred EEccCCceeecccC-CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-----
Confidence 99999998764322 122234468999999998753 4578899999999999999999999864322111
Q ss_pred HHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 540 LAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 540 ~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
...+..+......++. ....++.+|+.+||+.+|++||++.||++.
T Consensus 238 --~~~~~~~~~~~~~~~~----------~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 --LFKIPRNPPPTLHQPE----------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred --HhhccccCCCcccCCC----------CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1111111111111111 122468899999999999999999999853
No 224
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=340.36 Aligned_cols=278 Identities=19% Similarity=0.283 Sum_probs=201.1
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCC------CCeeeeEEE
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH------PNLLRLLGC 388 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H------~niv~l~g~ 388 (692)
.+++...+++|...++||+|+||+||++... .++.||||+++.. ....+++..|+++++.++| .++++++++
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 3455566789999999999999999999864 4778999999643 2233456677777777654 458899998
Q ss_pred EEeC-CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-----
Q 005536 389 CIEE-GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY----- 462 (692)
Q Consensus 389 ~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~----- 462 (692)
+... ...++|||++ +++|.+++.+. ..+++..+..|+.|++.||+|||+. .+|+||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccc
Confidence 8764 5788999988 78899988764 4599999999999999999999973 3899999999999998765
Q ss_pred -----------ceEEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCC
Q 005536 463 -----------RSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRP 531 (692)
Q Consensus 463 -----------~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~ 531 (692)
.+||+|||++... ........||+.|+|||++.+..++.++|||||||+||||++|+.||+....
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~----~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDE----RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred ccccccCCCCceEEECCCCccccC----ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 4999999987642 1223456799999999999999999999999999999999999999975443
Q ss_pred cccccHHHHHHHHh----c----cCccccccc------ccCCc--------CCCccCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 532 HSEVNLAALAIDRI----G----RGCVDEIID------PYLEP--------HRDAWTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 532 ~~~~~~~~~~~~~~----~----~~~~~ei~d------~~l~~--------~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
.+...+.......+ . .....++++ +...+ ............+.+|+.+||+.||++||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 22211111110000 0 000000000 00000 00000001124578999999999999999
Q ss_pred CHHHHHHHHHhhhhccccccc
Q 005536 590 TMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 590 sm~eVl~~L~~i~~~~~~~~~ 610 (692)
|++|++ .++|....
T Consensus 431 ta~e~L-------~Hp~~~~~ 444 (467)
T PTZ00284 431 NARQMT-------THPYVLKY 444 (467)
T ss_pred CHHHHh-------cCcccccc
Confidence 999988 67887543
No 225
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-36 Score=316.80 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=207.1
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+|+..+.||.|+||+||+|.. .+++.|++|.+........+.+.+|+.+++.++|+||+++++++.+.+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 35688999999999999999985 56889999999876666677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... .+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++....... .
T Consensus 98 ~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~-~ 170 (296)
T cd06655 98 LAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ-S 170 (296)
T ss_pred cCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc-c
Confidence 9999999988643 489999999999999999999994 99999999999999999999999999987533222 1
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......++..|+|||.+.+..++.++|||||||++|||++|+.||....+.... ..+.......+..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-------~~~~~~~~~~~~~------ 237 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------YLIATNGTPELQN------ 237 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhcCCcccCC------
Confidence 223446899999999999888999999999999999999999998654332111 1111111111101
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
+......+.+++.+||+.+|++||++.+|+ .++|..
T Consensus 238 ----~~~~~~~~~~li~~~l~~dp~~Rpt~~~il-------~~~~~~ 273 (296)
T cd06655 238 ----PEKLSPIFRDFLNRCLEMDVEKRGSAKELL-------QHPFLK 273 (296)
T ss_pred ----cccCCHHHHHHHHHHhhcChhhCCCHHHHh-------hChHhh
Confidence 112234678899999999999999999887 566654
No 226
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.3e-36 Score=313.41 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=204.9
Q ss_pred CChHHHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEe
Q 005536 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIE 391 (692)
Q Consensus 314 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~ 391 (692)
.++.++....+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....++..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 356677778889999999999999999999864 5788999998654 34456788999999999 69999999999863
Q ss_pred ------CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceE
Q 005536 392 ------EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSK 465 (692)
Q Consensus 392 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~k 465 (692)
.+..+++|||+++|+|.+++.......+++..++.++.|++.||+|||+ .+|+|+||||+||++++++.+|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence 4578999999999999999987666668999999999999999999999 4999999999999999999999
Q ss_pred EeeecCCccCCCCCCcccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH
Q 005536 466 VADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 466 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~ 540 (692)
|+|||++....... .......|++.|+|||.+. ...++.++||||||+++|||++|+.||....+....
T Consensus 162 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----- 235 (282)
T cd06636 162 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----- 235 (282)
T ss_pred EeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-----
Confidence 99999987532211 1223456899999999875 346888999999999999999999998643221111
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..+.+..... .. .......+.+|+.+||+.+|.+||++.|++
T Consensus 236 --~~~~~~~~~~-----~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 236 --FLIPRNPPPK-----LK------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred --hhHhhCCCCC-----Cc------ccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 0111111100 00 012335789999999999999999999887
No 227
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.8e-37 Score=314.97 Aligned_cols=240 Identities=20% Similarity=0.353 Sum_probs=189.8
Q ss_pred eeecccccEEEEEEEEeC--------CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKLHN--------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+.||+|+||+||+|.... ...|++|.+........+++.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998533 234888888765555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc--------eEEeeecCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR--------SKVADFGLSR 473 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~--------~kl~DFGla~ 473 (692)
+++|+|.++++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +|++|||++.
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999998653 368999999999999999999999 59999999999999987765 6999999886
Q ss_pred cCCCCCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCC-cccCCCCCcccccHHHHHHHHhccCccc
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITAL-KVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
.... .....++..|+|||++.+. .++.++||||||+++|||++|. .|+....+... ...... . .
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-------~~~~~~-~-~ 222 (258)
T cd05078 157 TVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-------LQFYED-R-H 222 (258)
T ss_pred ccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-------HHHHHc-c-c
Confidence 4221 1234678899999998764 5899999999999999999985 44432211110 111110 0 0
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
.+ +.....++.+|+.+||+.+|++|||+++++++|+
T Consensus 223 ~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 223 QL------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred cC------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0112246889999999999999999999998874
No 228
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-35 Score=308.42 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=189.9
Q ss_pred eeecccccEEEEEEEEeCCC---EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 330 HRLGTGAYGTVYAGKLHNDD---WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
++||+|+||+||+|+..++. .+++|.++... ....+.|.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 36999999999999865543 45677665443 345678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC-Ccc
Q 005536 406 TLCQHLQRERG--SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHI 482 (692)
Q Consensus 406 sL~~~l~~~~~--~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~-~~~ 482 (692)
+|.+++..... ..+++...+.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999986432 346777888999999999999998 499999999999999999999999999986422111 112
Q ss_pred cccCCCCCCCCCcccccc-------CCCCCccceeehhHHHHHHHhC-CcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 483 STAPQGTPGYLDPQYHQY-------FHLSDKSDVYSFGVVLIEIITA-LKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~-------~~~s~ksDV~SfGvll~eLltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
.....++..|+|||++.. ..++.++||||||+++|||+++ ..|+....+ .......+ .+....+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~-~~~~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVI-KDQQVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-hhcccccC
Confidence 234467899999998743 2457899999999999999974 556643221 11111112 22223333
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
++.+... ....+.+++..|| .+|++||+++||+++|.
T Consensus 231 ~~~~~~~-------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLELP-------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCCC-------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3333211 2246778999999 67999999999998873
No 229
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7.9e-36 Score=306.11 Aligned_cols=251 Identities=29% Similarity=0.462 Sum_probs=202.8
Q ss_pred CccceeecccccEEEEEEEEeC-----CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-----DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
|+..+.||+|+||.||+++..+ +..||+|.++..... ..+.+.+|+.++.+++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456789999999999998754 378999999765433 6778999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++.......+++..++.++.|++.||+|||+. +++||||||+||++++++.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999875443489999999999999999999994 99999999999999999999999999998644332
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
........+++.|+|||.+.+..++.++||||||++++||++ |+.|+..... ....+.+..+.....
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~----- 225 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-------EEVLEYLKKGYRLPK----- 225 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHhcCCCCCC-----
Confidence 222222347889999999988889999999999999999998 7777653211 112222332221111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
......++.+++.+||+.+|++|||+.|+++.|
T Consensus 226 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011345788999999999999999999998764
No 230
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-36 Score=317.02 Aligned_cols=256 Identities=25% Similarity=0.347 Sum_probs=203.6
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..+.||+|+||+||++... +++.||+|.+.... ....+++.+|+++++.++||||+++++++...+.+++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45777889999999999999865 57889999887543 34467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ..+++.....++.+++.||.|||+. .+|+||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 9999999988764 4589999999999999999999974 48999999999999999999999999998643221
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccc-----cHHHHHHHHhccCcccccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEV-----NLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~ei~d~ 556 (692)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.......+. ..... ...+..... +
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~ 231 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDL-LQQIVQEPP-----P 231 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHH-HHHHhhccC-----C
Confidence 122456899999999998889999999999999999999999999754332111 11111 111111100 0
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
.+. ......++.+|+.+||+.+|++||++.||++..
T Consensus 232 ~~~------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 232 RLP------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCC------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 012345788999999999999999999998653
No 231
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-36 Score=328.78 Aligned_cols=263 Identities=22% Similarity=0.260 Sum_probs=198.2
Q ss_pred hccCccceeecccccEEEEEEEEeC---CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN---DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
..+|...+.||+|+||.||++...+ +..||+|.+... +.+.+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 4579999999999999999997543 467999987643 34568999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
|++. ++|.+++.. ...+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9994 789898843 3569999999999999999999999 499999999999999999999999999997533222
Q ss_pred -CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc-----
Q 005536 480 -SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI----- 553 (692)
Q Consensus 480 -~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei----- 553 (692)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..................++.....-.
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 12223457999999999999999999999999999999999999998654433221111112222211110000
Q ss_pred -----ccccCCcCCCccC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 554 -----IDPYLEPHRDAWT-------LSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 554 -----~d~~l~~~~~~~~-------~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+..........+. .....++.+++.+||+.+|++||++.|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000000 012346788999999999999999999983
No 232
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=301.09 Aligned_cols=268 Identities=22% Similarity=0.254 Sum_probs=205.2
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCch-h-HHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTD-S-IDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~-~-~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV 398 (692)
+.|+..++|++|.||.||+|+. .+++.||+|+++..... . --.-++|+.+|.+.+|||||.+-.+.... +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 3466688999999999999985 45789999999865321 1 12457999999999999999999887643 579999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||++ -+|...|+... .++...+..-+..|+++||+|||.. .|+|||||++|+|+.+.|.+||+|||+||.+...
T Consensus 156 Me~~E-hDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVE-HDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHH-hhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 99996 48988888764 6788999999999999999999994 9999999999999999999999999999975433
Q ss_pred CCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc--
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID-- 555 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d-- 555 (692)
....+..+-|..|.|||.+.+. .|+...|+||+|||+.||+++++.|......++.+ ...+.++...-..+..
T Consensus 231 -~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~---~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 231 -LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD---KIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred -cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH---HHHHHhCCCccccCCCcc
Confidence 3445667789999999987665 79999999999999999999999887654443333 3333333211100000
Q ss_pred ---------------ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 556 ---------------PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 556 ---------------~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
..+...+... ...+.-.+|+...|.+||.+|.|++|.+ .+.|+.+
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~--~lse~g~~Lln~llt~dP~kR~tA~~~L-------~h~~F~e 366 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGAL--SLSEQGFDLLNKLLTYDPGKRITAEDGL-------KHEYFRE 366 (419)
T ss_pred ccchhhccccCCCCchhhhhhcccc--ccchhHHHHHHHHhccCccccccHHHhh-------ccccccc
Confidence 0011111111 1235678999999999999999999887 5666653
No 233
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.4e-36 Score=310.34 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=199.9
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
+.|...+.||+|+||.||++.. +++.||+|.++.. ...+.+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4578889999999999999975 6778999998643 2446789999999999999999999998654 4799999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++.......+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----~ 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----V 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceecccc----C
Confidence 9999999987655568999999999999999999998 59999999999999999999999999998753221 1
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||...... ...+.+.++...+.
T Consensus 155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~--------- 218 (254)
T cd05083 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-------EVKECVEKGYRMEP--------- 218 (254)
T ss_pred CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-------HHHHHHhCCCCCCC---------
Confidence 22234678999999988899999999999999999998 88888633221 12223332211111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
....+..+.+++.+||+.+|++||++++|++.|++
T Consensus 219 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 ---PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11233578899999999999999999999998863
No 234
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.3e-36 Score=347.11 Aligned_cols=260 Identities=22% Similarity=0.296 Sum_probs=204.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..++||+|+||+||+|+.. +++.||||+++... ....++|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999865 47899999997532 233567999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcc---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 400 EFMPNGTLCQHLQRER---------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999987421 1236778889999999999999999 499999999999999999999999999
Q ss_pred CCccCCCCCC-----------------cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcc
Q 005536 471 LSRLGMTESS-----------------HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHS 533 (692)
Q Consensus 471 la~~~~~~~~-----------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~ 533 (692)
+++....... .......||+.|+|||++.+..++.++||||||+++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9976411100 01122469999999999999999999999999999999999999986422110
Q ss_pred cccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhh
Q 005536 534 EVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRP-TMMEVAEELEHIRV 603 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP-sm~eVl~~L~~i~~ 603 (692)
. .....+ .++..... ..+.+..+.+++.+||+.+|++|| +++++.+.|+....
T Consensus 239 -i----~~~~~i--------~~P~~~~p----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 -I----SYRDVI--------LSPIEVAP----YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred -h----hhhhhc--------cChhhccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 000000 11100000 012335688999999999999995 77888888887643
No 235
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=321.27 Aligned_cols=259 Identities=25% Similarity=0.366 Sum_probs=216.8
Q ss_pred HHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc---hhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCe
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT---DSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGE 394 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~ 394 (692)
+.....|+..++||+|.||.||+++... |+.+|+|.+.+... ...+.+.+|+.+|+++. |||||.+.+.+++...
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 3455678888999999999999999665 89999999986643 34568999999999998 9999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC----CceEEeeec
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN----YRSKVADFG 470 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~----~~~kl~DFG 470 (692)
.++|||++.+|.|.+.+... .+++.....++.|++.+++|||+ .+|+||||||+|+|+... +.+|++|||
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999999999876 39999999999999999999999 499999999999999543 579999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
++..... ........||+.|+|||++....|+...||||+||++|.|++|..||........ ...+.++..
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-------~~~i~~~~~ 255 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-------FLAILRGDF 255 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-------HHHHHcCCC
Confidence 9987443 4456777999999999999999999999999999999999999999975443222 113444433
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
......| ......+.+++.+++..||.+|+|+.++++ ++|...
T Consensus 256 --------~f~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~L~-------HpWi~~ 298 (382)
T KOG0032|consen 256 --------DFTSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQALQ-------HPWIKS 298 (382)
T ss_pred --------CCCCCCc-cccCHHHHHHHHHhcccCcccCCCHHHHhc-------CccccC
Confidence 1111222 234667889999999999999999999986 788653
No 236
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-36 Score=331.48 Aligned_cols=263 Identities=24% Similarity=0.273 Sum_probs=197.0
Q ss_pred hhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
...+|...+.||+|+||.||++.... ++.||||... ...+.+|+++|++++|+||+++++++...+..++|||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 34579999999999999999998754 6789999643 2346789999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC-
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES- 479 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~- 479 (692)
++ .++|.+++.... ..++|..++.|+.|++.||+|||+ .+|+||||||+||||+.++.+||+|||+++......
T Consensus 241 ~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99 579999887542 469999999999999999999999 499999999999999999999999999997643221
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCC-CcccccHHHHHHHHhccCcc--ccccc-
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSR-PHSEVNLAALAIDRIGRGCV--DEIID- 555 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~--~ei~d- 555 (692)
........||+.|+|||++.+..++.++|||||||+||||++|..++.... ............+.+..... .+...
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 112234569999999999999999999999999999999999876553221 11111111122222222111 00000
Q ss_pred --c--------------cCCcCCCccC--HHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 556 --P--------------YLEPHRDAWT--LSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 556 --~--------------~l~~~~~~~~--~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
. ........|. ......+.+|+.+||+.||.+|||+.|++
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL 453 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELL 453 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHh
Confidence 0 0000000010 01123678999999999999999999998
No 237
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.5e-36 Score=311.21 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=202.8
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|+..+.||+|+||+||+++.. ++..||+|.+........+.|.+|++++++++|+||+++++.+.+....++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888889999999999999864 5789999999877667778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ...+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++....... .
T Consensus 84 ~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (280)
T cd06611 84 CDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q 158 (280)
T ss_pred cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence 9999999998764 3469999999999999999999999 499999999999999999999999999987532221 1
Q ss_pred ccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
......+++.|++||.+. ...++.++||||||+++|||++|+.|+...... . ....+..+....+..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~-~~~~~~~~~~~~~~~- 230 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------R-VLLKILKSEPPTLDQ- 230 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------H-HHHHHhcCCCCCcCC-
Confidence 223456899999999874 345778999999999999999999998643221 1 112222221111100
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+.....++.+++.+||+.+|++||++.+|+
T Consensus 231 ---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 231 ---------PSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred ---------cccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 112234678999999999999999998886
No 238
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.9e-36 Score=312.54 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=198.8
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999976 47899999987542 2234568899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|..++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998887776543 358999999999999999999999 4999999999999999999999999999986433221
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc-----------C
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR-----------G 548 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~ 548 (692)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.... ....... .
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYL---IRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCChHHhhhcccc
Confidence 2233457889999999865 4678999999999999999999999864432221111 1111100 0
Q ss_pred cc-cccccccCCc--CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 549 CV-DEIIDPYLEP--HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 549 ~~-~ei~d~~l~~--~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.. .....+.... ............+.+|+.+||+.+|++||++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 00 0000000000 00000012245788999999999999999999887
No 239
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=308.61 Aligned_cols=271 Identities=23% Similarity=0.311 Sum_probs=207.1
Q ss_pred HHHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEee--cCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe----
Q 005536 319 IEKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE---- 391 (692)
Q Consensus 319 l~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~--~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~---- 391 (692)
...+...|...+.||+|+||.|..++. .+++.||||++. ..+....++-.+|+++|+.++|+||+.+++.+..
T Consensus 17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 334556677678999999999999985 458899999997 4456677888999999999999999999999865
Q ss_pred -CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 392 -EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 392 -~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
-...|+|+|+| .-+|.+.++.. ..|+.....-+..|+++||.|+|+. +|+||||||+|+|++.+..+||+|||
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 35789999999 66888888764 4499999999999999999999996 99999999999999999999999999
Q ss_pred CCccCCCC-CCcccccCCCCCCCCCccccc-cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH--------
Q 005536 471 LSRLGMTE-SSHISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL-------- 540 (692)
Q Consensus 471 la~~~~~~-~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~-------- 540 (692)
+||..... .....+..+-|..|.|||.+. ...|+...||||.|||+.||++|++.|.......+..+...
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 99974332 223346677899999999864 45899999999999999999999999987665554443322
Q ss_pred HHHHhccCcccccccccCCcCCCc---cCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDA---WTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~---~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
....+........+...-...... .-........+|+.+||..||.+|+|++|.+
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 122222111111111000000000 0012234678999999999999999988876
No 240
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.8e-36 Score=322.60 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=191.8
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhC---CCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSV---SHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l---~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
||+|+||+||+++.. +++.||||++.... .....++..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999865 47899999986432 22344566777777665 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~-~~~~~ 154 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTD-NKTTN 154 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC-CCCcc
Confidence 9999998754 458999999999999999999999 49999999999999999999999999998753222 12234
Q ss_pred cCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 485 APQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
...||+.|+|||.+.+. .++.++|||||||++|||++|+.||..... ......+..+... +...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~-~~~~------- 219 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-------QQMYRNIAFGKVR-FPKN------- 219 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-------HHHHHHHHcCCCC-CCCc-------
Confidence 45699999999998654 488999999999999999999999864321 1122333322211 1000
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
....++.+++.+||+.+|++||++.+. ++++..++|..
T Consensus 220 ----~~~~~~~~li~~~L~~~P~~R~~~~~~---~~~ll~h~~~~ 257 (330)
T cd05586 220 ----VLSDEGRQFVKGLLNRNPQHRLGAHRD---AVELKEHPFFA 257 (330)
T ss_pred ----cCCHHHHHHHHHHcCCCHHHCCCCCCC---HHHHhcCcccc
Confidence 123467899999999999999965432 22334566654
No 241
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-35 Score=306.16 Aligned_cols=249 Identities=27% Similarity=0.435 Sum_probs=199.4
Q ss_pred cCccceeecccccEEEEEEEEeCCCEEEEEEeecCC------chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD------TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~------~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+|...+.||+|+||+||+|...+++.+|||.++... ....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 367788999999999999998889999999987542 12345688999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999764 358899999999999999999998 48999999999999999999999999998753211
Q ss_pred -----CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 479 -----SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 479 -----~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
.........|+..|+|||++.+..++.++||||||+++|||++|+.||........ ........+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~- 229 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----MFYIGAHRGLMPR- 229 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----HHHhhhccCCCCC-
Confidence 11122334689999999999988999999999999999999999999864321111 0000000111111
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+. .....++.+++.+||+.+|++||++.|++
T Consensus 230 ----~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 260 (265)
T cd06631 230 ----LP-------DSFSAAAIDFVTSCLTRDQHERPSALQLL 260 (265)
T ss_pred ----CC-------CCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 11 12335678999999999999999999887
No 242
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=335.31 Aligned_cols=268 Identities=21% Similarity=0.303 Sum_probs=195.1
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--------
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE-------- 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~-------- 392 (692)
..++|...++||+|+||+||+|+.. +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999864 57899999886432 2345799999999999999999987532
Q ss_pred CeeEEEEEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-ceEEeee
Q 005536 393 GEPILVYEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADF 469 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-~~kl~DF 469 (692)
..+++||||++ ++|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence 24678999996 5787777542 23569999999999999999999999 4999999999999999664 7999999
Q ss_pred cCCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 470 GLSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 470 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
|+++..... .......||+.|+|||++.+ ..++.++|||||||+||||++|+.||........ .....+.+...
T Consensus 216 Gla~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~---~~~i~~~~~~p 290 (440)
T PTZ00036 216 GSAKNLLAG--QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ---LVRIIQVLGTP 290 (440)
T ss_pred ccchhccCC--CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCC
Confidence 999864322 12234568999999998765 4689999999999999999999999875433221 11111111110
Q ss_pred cc----------cccccccCCc--CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 549 CV----------DEIIDPYLEP--HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 549 ~~----------~ei~d~~l~~--~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.. .++.-+.... .....+.....++.+|+.+||+.+|.+|||+.|++ .++|...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l-------~hp~f~~ 356 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL-------ADPFFDD 356 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh-------CChhHHh
Confidence 00 0000000000 00001112345788999999999999999998887 5566543
No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.6e-36 Score=314.31 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=199.7
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4556678999999999999864 46789999987543 345567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.. ..+++..+..++.|++.||+|||+ ++++|+||+|+||++++++.+||+|||++....... ..
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~ 157 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IK 157 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc-hh
Confidence 99999998864 358999999999999999999998 599999999999999999999999999997533221 22
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....++..|+|||++.+..++.++||||||+++|||++|+.|+....+.. ....+..+.. +.+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~-----~~~---- 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-------VLFLIPKNSP-----PTL---- 221 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-------HHhhhhcCCC-----CCC----
Confidence 233468899999999998899999999999999999999999986332211 1111111111 111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+.+++.+||+.+|++||+|.+|++
T Consensus 222 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 ---EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ---CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1123456889999999999999999999986
No 244
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-35 Score=317.56 Aligned_cols=258 Identities=18% Similarity=0.276 Sum_probs=193.9
Q ss_pred ceeeccc--ccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 329 KHRLGTG--AYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 329 ~~~LG~G--~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
.++||+| +|++||+++. .+++.||+|+++... ....+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 7899999985 468899999997542 2334567789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC---
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS--- 480 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~--- 480 (692)
+|+|.+++.......+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.++++||+..........
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9999999976555569999999999999999999998 4999999999999999999999999986543211110
Q ss_pred ---cccccCCCCCCCCCcccccc--CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 481 ---HISTAPQGTPGYLDPQYHQY--FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 481 ---~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||....... ..... ..+.....++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~-~~~~~~~~~~ 232 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ------MLLEK-LNGTVPCLLD 232 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH------HHHHH-hcCCcccccc
Confidence 01122356788999999875 468899999999999999999999986422111 01111 1111111110
Q ss_pred c-------------------cC--------------CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 P-------------------YL--------------EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~-------------------~l--------------~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. .. ..............+.+|+.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 00 00000111223457889999999999999999999983
No 245
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.5e-36 Score=306.34 Aligned_cols=248 Identities=26% Similarity=0.407 Sum_probs=202.1
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||++... +++.+|||.+... .....+.+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999864 5788999998754 234567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~kl~DFGla~~~~~~~~ 480 (692)
+++++|.+++.......+++..++.++.+++.+|+|||+ .+|+|+||||+||+++++ ..+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-- 155 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-- 155 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--
Confidence 999999999987655668999999999999999999999 499999999999999865 46899999999764322
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|++..... .. ...+..+....+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~------ 222 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP------AL-VLKIMSGTFAPIS------ 222 (256)
T ss_pred ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH------HH-HHHHHhcCCCCCC------
Confidence 1223356899999999999888999999999999999999999998643221 11 1122222111111
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......+.+++.+||+.+|++|||+.|+++
T Consensus 223 ------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 223 ------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 112356889999999999999999999984
No 246
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-36 Score=311.40 Aligned_cols=250 Identities=22% Similarity=0.357 Sum_probs=199.3
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
+|+..+.||+|+||.||+++.. ++..||+|.++.. .....+++.+|++++++++|+||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5777889999999999999875 5889999998754 3344578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 403 PNGTLCQHLQRER-GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 403 ~~gsL~~~l~~~~-~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++++|.+++.... ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++..... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---~ 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA---S 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---C
Confidence 9999999887642 23589999999999999999999973 4899999999999999999999999999875322 1
Q ss_pred ccccCCCCCCCCCccccccC------CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF------HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~------~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
......+++.|+|||.+.+. .++.++||||||+++|||++|+.||....... .......+..+....+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~-- 230 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN----IFAQLSAIVDGDPPTL-- 230 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh----HHHHHHHHhhcCCCCC--
Confidence 22334688899999988544 35889999999999999999999986432111 1111122222211111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+.....++.+++.+||+.+|++||++.+++
T Consensus 231 ----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 260 (286)
T cd06622 231 ----------PSGYSDDAQDFVAKCLNKIPNRRPTYAQLL 260 (286)
T ss_pred ----------CcccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 112445788999999999999999998877
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.2e-35 Score=309.35 Aligned_cols=247 Identities=25% Similarity=0.372 Sum_probs=202.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..|+..++||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 34667788999999999999865 47889999987543 34567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.. ..+++.....++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++....... .
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-I 156 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-c
Confidence 999999999864 348899999999999999999998 499999999999999999999999999997643222 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......++..|+|||++.+..++.++||||||+++|||++|+.|+....+... ...+..+..
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------~~~~~~~~~----------- 218 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-------LFLIPKNNP----------- 218 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-------hhhhhcCCC-----------
Confidence 22344688899999999888899999999999999999999999864332111 111111111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..........+.+++.+||+.+|++||++.++++
T Consensus 219 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 219 -PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred -CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 1112345567899999999999999999999974
No 248
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=320.97 Aligned_cols=191 Identities=22% Similarity=0.337 Sum_probs=164.6
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
..+|...+.||+|+||.||+|+... ++.||+|..... ....|+.++++++|+||+++++++.+.+..++|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 4579999999999999999998754 578999975432 235699999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+ .++|.+++... ...+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 139 ~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~ 211 (357)
T PHA03209 139 Y-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--P 211 (357)
T ss_pred c-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC--c
Confidence 9 57898988754 3569999999999999999999999 49999999999999999999999999999752221 1
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVV 526 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~ 526 (692)
......||+.|+|||++.+..++.++||||||+++|||+++..++
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 223456899999999999999999999999999999999976655
No 249
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-35 Score=305.49 Aligned_cols=247 Identities=27% Similarity=0.433 Sum_probs=200.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-----chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-----TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+|+..+.||+|+||+||+|... +++.|++|.+.... .+..+++.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999976 68899999987543 23557899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999999764 358999999999999999999998 49999999999999999999999999998763322
Q ss_pred CCcccccCCCCCCCCCccccccCC-CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFH-LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
. ......|+..|++||.+.... ++.++|+||||+++|||++|+.||....+. ..............+
T Consensus 156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~---- 223 (258)
T cd06632 156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV------AAVFKIGRSKELPPI---- 223 (258)
T ss_pred c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH------HHHHHHHhcccCCCc----
Confidence 2 224456899999999987766 899999999999999999999998643211 111111111111111
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||++.++++
T Consensus 224 --------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 224 --------PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1122356789999999999999999999873
No 250
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.1e-36 Score=317.90 Aligned_cols=195 Identities=25% Similarity=0.379 Sum_probs=160.0
Q ss_pred ceeecccccEEEEEEEEe---CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe--CCeeEEEEEeCC
Q 005536 329 KHRLGTGAYGTVYAGKLH---NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE--EGEPILVYEFMP 403 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~---~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~--~~~~~lV~E~~~ 403 (692)
.++||+|+||+||+|+.. +++.||+|.++.. .....+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 458999999999999864 4578999998643 223567899999999999999999999865 356889999985
Q ss_pred CCCHHHHHhhcc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE----cCCCceEEeeecCC
Q 005536 404 NGTLCQHLQRER-------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILL----DYNYRSKVADFGLS 472 (692)
Q Consensus 404 ~gsL~~~l~~~~-------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILl----d~~~~~kl~DFGla 472 (692)
++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 68888875432 1248899999999999999999999 499999999999999 45679999999999
Q ss_pred ccCCCCCC--cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCC
Q 005536 473 RLGMTESS--HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFS 529 (692)
Q Consensus 473 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~ 529 (692)
+....... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 86432211 12234578999999999876 46899999999999999999999999643
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-35 Score=306.80 Aligned_cols=248 Identities=24% Similarity=0.422 Sum_probs=198.4
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCch---------hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTD---------SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE 394 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~ 394 (692)
+|...+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999864 5788999988654221 23568899999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999764 458899999999999999999998 4999999999999999999999999999876
Q ss_pred CCCCCCc-----ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 475 GMTESSH-----ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 475 ~~~~~~~-----~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... . ....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~-~~~~~~~~~ 228 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------Q-AIFKIGENA 228 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------H-HHHHHhccC
Confidence 4321111 112345889999999999888999999999999999999999998643211 1 111111111
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+ + +......+.+++.+||+.+|.+||++.||++
T Consensus 229 ~~~-----~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 SPE-----I-------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCc-----C-------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 111 1 1123457889999999999999999998874
No 252
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=344.22 Aligned_cols=259 Identities=22% Similarity=0.362 Sum_probs=201.6
Q ss_pred HHHHHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-
Q 005536 317 KEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE- 392 (692)
Q Consensus 317 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~- 392 (692)
.+.+...++|.+.++||+|+||+||+++... +..||+|.+... .......|..|+.++++|+|||||++++++.+.
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 3445566789999999999999999998654 678899988754 234567799999999999999999999998654
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCeEecCCCCCceEEcCC----
Q 005536 393 -GEPILVYEFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAM----NPPIYHRDIKSSNILLDYN---- 461 (692)
Q Consensus 393 -~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~----~~~iiHrDik~~NILld~~---- 461 (692)
..++|||||+++|+|.++|.... ...+++..++.|+.||+.||+|||+.. .++||||||||+||||+.+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 56899999999999999997632 246999999999999999999999842 1359999999999999642
Q ss_pred -------------CceEEeeecCCccCCCCCCcccccCCCCCCCCCcccccc--CCCCCccceeehhHHHHHHHhCCccc
Q 005536 462 -------------YRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY--FHLSDKSDVYSFGVVLIEIITALKVV 526 (692)
Q Consensus 462 -------------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDV~SfGvll~eLltg~~p~ 526 (692)
..+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||+||||++|+.||
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred ccccccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 35899999999763222 12234579999999998854 45889999999999999999999999
Q ss_pred CCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 527 DFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
...... ......+..+.... + . ....++.+|+.+||+.+|.+||++.|+++
T Consensus 244 ~~~~~~------~qli~~lk~~p~lp-----i----~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 244 HKANNF------SQLISELKRGPDLP-----I----K----GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcCCcH------HHHHHHHhcCCCCC-----c----C----CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 643221 11222232221100 0 0 12356889999999999999999999983
No 253
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6e-36 Score=316.15 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=200.9
Q ss_pred ccCccceeecccccEEEEEEEEe-CCC----EEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDD----WVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+.|+..+.||+|+||.||+|+.. ++. .||+|.+.... .....++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45667789999999999999864 343 47888887543 23345789999999999999999999998754 4679
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
++||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999998764 3458999999999999999999999 4999999999999999999999999999986432
Q ss_pred CCCc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 478 ESSH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 478 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.... ......++..|+|||++.+..++.++||||||+++|||++ |+.|+..... ....+.+..+.... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~--~ 232 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGERLP--Q 232 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCCCC--C
Confidence 2211 1223346779999999998899999999999999999998 8888753211 11122222221110 0
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
+ ......+.+++.+||..+|++||+|.++++.|+.+...
T Consensus 233 ~----------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 233 P----------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred C----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 11224678999999999999999999999999988644
No 254
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.3e-35 Score=303.28 Aligned_cols=256 Identities=27% Similarity=0.380 Sum_probs=204.7
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..+.||.|+||+||+|... ++..+++|++.... ....+.+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999854 57889999987543 33567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERG-SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~-~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
+++++|.+++..... ..+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999986543 568999999999999999999998 4999999999999999999999999999876433222
Q ss_pred c---ccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 481 H---ISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 481 ~---~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
. ......|+..|++||++... .++.++||||||+++|||++|+.|+....+.. ...+..... ..
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~----- 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQND-PP----- 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcCC-CC-----
Confidence 1 22344689999999998776 78999999999999999999999986433211 111212111 11
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+.... ........+.+++.+||+.+|++||++.||++
T Consensus 226 ~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGA--DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCcc--ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111000 01133467889999999999999999998873
No 255
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.1e-36 Score=309.49 Aligned_cols=254 Identities=25% Similarity=0.393 Sum_probs=198.6
Q ss_pred CccceeecccccEEEEEEEEe----CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC------
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH----NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG------ 393 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~------ 393 (692)
|...+.||+|+||+||+|.+. .++.||||+++.. .....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456778999999999999854 2578999998754 3345678999999999999999999999886542
Q ss_pred eeEEEEEeCCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 394 EPILVYEFMPNGTLCQHLQRER----GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
..++++||+++|+|.+++.... ...+++...+.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999998876432 1248899999999999999999998 49999999999999999999999999
Q ss_pred cCCccCCCCCC-cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhcc
Q 005536 470 GLSRLGMTESS-HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 470 Gla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
|+++....... .......+++.|++||.+....++.++||||||+++|||++ |+.|+..... . .....+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~------~-~~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN------S-EIYNYLIK 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH------H-HHHHHHHc
Confidence 99986432221 12223345678999999988889999999999999999999 7787753221 1 11222222
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+.... .+......+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 231 ~~~~~------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRLK------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11100 0012335789999999999999999999999999976
No 256
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.3e-35 Score=313.38 Aligned_cols=263 Identities=24% Similarity=0.313 Sum_probs=206.4
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc---hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT---DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||+||++...+ ++.||+|.+..... ...+.+.+|+++++.++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999998764 88999999976532 25567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++.......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999999986655679999999999999999999998 499999999999999999999999999986532211
Q ss_pred Cc----------------------------ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCC
Q 005536 480 SH----------------------------ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRP 531 (692)
Q Consensus 480 ~~----------------------------~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~ 531 (692)
.. ......||..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 00 11123588999999999988899999999999999999999999864332
Q ss_pred cccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 532 HSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
. ..... +...... .. . .......+.+++.+||+.+|++||++...+++| ..++|....
T Consensus 238 ~------~~~~~-~~~~~~~------~~-~----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l---l~~~~~~~~ 295 (316)
T cd05574 238 D------ETFSN-ILKKEVT------FP-G----SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI---KQHPFFRGV 295 (316)
T ss_pred H------HHHHH-HhcCCcc------CC-C----ccccCHHHHHHHHHHccCCHhHCCCchhhHHHH---HcCchhhcC
Confidence 1 11111 1111100 00 0 011346789999999999999999955544332 245666543
No 257
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.7e-36 Score=311.26 Aligned_cols=259 Identities=23% Similarity=0.329 Sum_probs=197.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||.|++|.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999864 57899999987542 22346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+. ++|.+++.......+++..++.++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++...... .
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-c
Confidence 95 689999987666679999999999999999999998 499999999999999999999999999987532211 1
Q ss_pred ccccCCCCCCCCCccccccCC-CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc-----------
Q 005536 482 ISTAPQGTPGYLDPQYHQYFH-LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC----------- 549 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~-~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 549 (692)
......++..|+|||++.+.. ++.++||||||+++|||+||+.||....... ......+......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHhCCCChhhhhhhhHHH
Confidence 223345788999999876544 6889999999999999999999986433211 1111111111000
Q ss_pred -----ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 -----VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 -----~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
........+ .........++.+++.+||+.||++||+++|++
T Consensus 233 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 233 DYKPSFPKWARQDF----SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHhhcccccccCH----HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 000000000 000011234678999999999999999999987
No 258
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=307.16 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=197.9
Q ss_pred hhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----ee
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----EP 395 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~~ 395 (692)
.+-.|...+++|.|+||.||+|++.. +..||||+.-....- --+|+++|++++|||||+|+-++.... ..
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 44567788999999999999999655 689999998654321 126999999999999999999987532 34
Q ss_pred EEEEEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CceEEeeecCC
Q 005536 396 ILVYEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFGLS 472 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~kl~DFGla 472 (692)
.||||||| .+|.+.++.. .+..++...+.-+..|+.+||+|||+. +|+||||||+|+|+|.+ +.+||+|||.|
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 58999996 4999888742 234577777888999999999999995 99999999999999976 89999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc-
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV- 550 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 550 (692)
+...... ......-|..|.|||.+.+. .|+.+.||||.|+|+.||+-|++.|......++ .....+.++.-..
T Consensus 174 K~L~~~e--pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ---L~eIik~lG~Pt~e 248 (364)
T KOG0658|consen 174 KVLVKGE--PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ---LVEIIKVLGTPTRE 248 (364)
T ss_pred eeeccCC--CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH---HHHHHHHhCCCCHH
Confidence 9754332 22445678899999987655 899999999999999999999999976443333 2233333332111
Q ss_pred ---------cccccccCCcCC--CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 551 ---------DEIIDPYLEPHR--DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 551 ---------~ei~d~~l~~~~--~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.-.+.+.... .-+......+.++|+.++|+.+|.+|.++.|++
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 122223222211 112334456889999999999999999999987
No 259
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.3e-35 Score=310.03 Aligned_cols=264 Identities=24% Similarity=0.337 Sum_probs=201.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||+|+.. +++.|++|++.... ....+.+.+|+.++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778889999999999999864 68899999998654 33457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+|+||||+||++++++.++|+|||++.........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999987653 5699999999999999999999994 9999999999999999999999999999864433222
Q ss_pred ccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc------cccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV------DEII 554 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~ei~ 554 (692)
......++..|+|||.+.+. .++.++||||||+++|||++|++++...... .........+..... .++.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcc
Confidence 23445689999999988654 4688999999999999999997777533221 111112221111100 0000
Q ss_pred c------ccCCc-CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 555 D------PYLEP-HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 555 d------~~l~~-~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+ +.... .......+....+.+++.+||+.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 00000 000000123468899999999999999999998873
No 260
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.9e-35 Score=303.39 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=201.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||+|+.. +++.|++|.++.... ...+++.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999864 678999999986644 3677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ..+++..+..|+.|++.||+|||+ .+|+|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999764 348899999999999999999999 49999999999999999999999999998764333222
Q ss_pred cc---ccCCCCCCCCCccccccCC---CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 482 IS---TAPQGTPGYLDPQYHQYFH---LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 482 ~~---~~~~gt~~Y~aPE~~~~~~---~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.. ....++..|++||++.+.. ++.++||||||+++|||++|+.||...... ... ...+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~-~~~~~~~~~~~--- 226 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQI-MFHVGAGHKPP--- 226 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHH-HHHHhcCCCCC---
Confidence 21 1356889999999988766 889999999999999999999998633211 111 11111111111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+.. .......+.+++.+||+.+|++||++.|++
T Consensus 227 --~~~-----~~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 227 --IPD-----SLQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred --CCc-----ccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 110 011245678999999999999999999886
No 261
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=8.4e-36 Score=311.67 Aligned_cols=265 Identities=24% Similarity=0.303 Sum_probs=201.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|+||.||+++.. +++.|++|+++.. .....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999875 4789999998754 23345789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++++.|..++.. ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9988777655543 2458999999999999999999999 4999999999999999999999999999987544333
Q ss_pred cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc------------
Q 005536 481 HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR------------ 547 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 547 (692)
.......++..|+|||++.+. .++.++||||||+++|||++|+.|+......+.. ......+..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL---YLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHHHhhhcccC
Confidence 233445688999999999888 8899999999999999999999988643221111 000010000
Q ss_pred Cccc--ccccccCCc-CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 548 GCVD--EIIDPYLEP-HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 548 ~~~~--ei~d~~l~~-~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.... +..+..... .....+.....++.+|+.+||..+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 000000000 000011122567899999999999999999998873
No 262
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.7e-35 Score=304.80 Aligned_cols=248 Identities=24% Similarity=0.368 Sum_probs=194.2
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-----chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--Cee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-----TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~ 395 (692)
.+|+..+.||+|+||.||++... +++.|++|++.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999864 57899999986432 23346788999999999999999999998763 568
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++++||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 8999999999999999764 348999999999999999999998 49999999999999999999999999998753
Q ss_pred CCCC--CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 476 MTES--SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 476 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
.... ........++..|+|||++.+..++.++||||||+++|||++|+.||..... ............
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~~~~~~---- 226 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKIATQPT---- 226 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHHhcCCC----
Confidence 2211 1111234589999999999988899999999999999999999999863221 111111111111
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.+ +......+.+++ +||..+|++||+|+||+
T Consensus 227 -~~~~-------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 227 -NPQL-------PSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred -CCCC-------chhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 1111 112234556666 78889999999999997
No 263
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-35 Score=306.05 Aligned_cols=254 Identities=28% Similarity=0.400 Sum_probs=201.7
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCC-----
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEG----- 393 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~----- 393 (692)
..+++|+..+.||+|+||+||+|+.. +++.+++|.+.... ...++|.+|+.+++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 46789999999999999999999975 46789999987653 3457899999999999 6999999999997644
Q ss_pred -eeEEEEEeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeec
Q 005536 394 -EPILVYEFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFG 470 (692)
Q Consensus 394 -~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFG 470 (692)
..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence 4899999999999999987644 4569999999999999999999998 499999999999999999999999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHh
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI 545 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~ 545 (692)
++...... ........|+..|+|||++.. ..++.++||||||+++|||++|+.||....+. .....+
T Consensus 159 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~ 230 (275)
T cd06608 159 VSAQLDST-LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-------RALFKI 230 (275)
T ss_pred cceecccc-hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-------HHHHHh
Confidence 98753222 222334568999999998753 34678999999999999999999998632211 111122
Q ss_pred ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 546 ~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.++....+.. +......+.+|+.+||..||++|||+.|+++
T Consensus 231 ~~~~~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PRNPPPTLKS----------PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hccCCCCCCc----------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2221111111 1123457889999999999999999999874
No 264
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-35 Score=315.29 Aligned_cols=195 Identities=25% Similarity=0.382 Sum_probs=159.4
Q ss_pred ceeecccccEEEEEEEEeC---CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe--CCeeEEEEEeCC
Q 005536 329 KHRLGTGAYGTVYAGKLHN---DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE--EGEPILVYEFMP 403 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~---~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~--~~~~~lV~E~~~ 403 (692)
..+||+|+||+||+++..+ +..||+|.+.... ....+.+|++++++++||||+++++++.. ....++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 4689999999999998654 4689999886432 33567899999999999999999999864 457889999985
Q ss_pred CCCHHHHHhhcc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE----cCCCceEEeeecCC
Q 005536 404 NGTLCQHLQRER-------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILL----DYNYRSKVADFGLS 472 (692)
Q Consensus 404 ~gsL~~~l~~~~-------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILl----d~~~~~kl~DFGla 472 (692)
++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 58888775321 2348899999999999999999999 499999999999999 56779999999999
Q ss_pred ccCCCCCC--cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCC
Q 005536 473 RLGMTESS--HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFS 529 (692)
Q Consensus 473 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~ 529 (692)
+....... .......||+.|+|||++.+ ..++.++||||||+++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 86432211 12234568999999999876 45889999999999999999999998643
No 265
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.9e-35 Score=308.53 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=196.8
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..+.||+|++|+||+|+.. +++.||||.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999865 578999999875432 2235677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++ ++|.+++.... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-~~ 158 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP-SK 158 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC-Cc
Confidence 97 59999887653 368999999999999999999999 49999999999999999999999999998753211 11
Q ss_pred ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc---cc----
Q 005536 482 ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD---EI---- 553 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---ei---- 553 (692)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||....... .......+.+...... .+
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE--DQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHhcCCCChhhhhhhhhcc
Confidence 1223356889999998865 468899999999999999999999986433111 1111111111110000 00
Q ss_pred --c--------cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 554 --I--------DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 554 --~--------d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
. ...+..... .......+.+++.+||+.+|++||++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~~p~~Rps~~e~l 286 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAP--RLDRIPHGEELALKFLQYEPKKRISAAEAM 286 (291)
T ss_pred ccccccccccCChhHHHhCc--CCCCchhHHHHHHHHhccCcccccCHHHHh
Confidence 0 000000000 011125678999999999999999999887
No 266
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.7e-35 Score=309.84 Aligned_cols=269 Identities=24% Similarity=0.312 Sum_probs=201.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCch-----hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTD-----SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+|+..+.||+|+||.||+|... +++.||||+++..... ....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999864 5889999999765322 344577899999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+ +++|.+++.... ..+++..++.++.|+++||+|||+. +|+|+||||+|||++.++.+||+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 999999997653 3699999999999999999999994 9999999999999999999999999999764332
Q ss_pred CCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC---------
Q 005536 479 SSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG--------- 548 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 548 (692)
. .......+++.|+|||.+.+ ..++.++||||||+++|||++|..++....+... .......+...
T Consensus 156 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 156 N-RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ---LGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred C-ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH---HHHHHHHcCCCchhhhhhcc
Confidence 1 22233456889999998754 4678899999999999999999777754332111 11111111100
Q ss_pred cccccccccCCcC--CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 549 CVDEIIDPYLEPH--RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 549 ~~~ei~d~~l~~~--~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
............. ...........+.+++.+||+.+|++|||+.||++ ++|..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~-------~~~~~~ 287 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE-------HPYFSN 287 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh-------CccccC
Confidence 0000000000000 00011123467889999999999999999999984 666553
No 267
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.9e-35 Score=304.55 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=206.4
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++|+..+.||+|++|.||+++..+ ++.|+||++..... ...+++.+|+.++.+++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 367888999999999999999765 88999999986644 4567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHS-AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~-~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
+++++|.+++... ..+++..++.++.|+++||+|||+ . +++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~- 154 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL- 154 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC-
Confidence 9999999999765 558999999999999999999998 5 99999999999999999999999999987643322
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ... ....+.......+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~-~~~~~~~~~~~~~------- 223 (264)
T cd06623 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFE-LMQAICDGPPPSL------- 223 (264)
T ss_pred CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHH-HHHHHhcCCCCCC-------
Confidence 22234568899999999998899999999999999999999999986543211 111 1222222111111
Q ss_pred CCCccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLS-SIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~-~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+.. ....+.+++.+||..+|++||++.|+++
T Consensus 224 -----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 224 -----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred -----CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111 3457889999999999999999999985
No 268
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-35 Score=304.67 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=202.4
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEe--CCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE--EGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~--~~~~~lV~ 399 (692)
+|+..+.||.|+||.||++.. .+++.||+|.++... ....+++.+|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477788999999999999985 457889999987542 3455678999999999999999999998764 34678999
Q ss_pred EeCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 400 EFMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAM--NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~--~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
||+++++|.+++.... ...+++..++.++.|++.||+|||... ..+|+|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999997642 346999999999999999999999321 259999999999999999999999999999864
Q ss_pred CCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 476 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.... .......+++.|++||.+.+..++.++||||||+++|+|++|+.|+..... ....+.+..+....+
T Consensus 161 ~~~~-~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~-- 230 (265)
T cd08217 161 GHDS-SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-------LQLASKIKEGKFRRI-- 230 (265)
T ss_pred cCCc-ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-------HHHHHHHhcCCCCCC--
Confidence 3322 112345689999999999988899999999999999999999999874321 122233333322111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||+.+|++||++.+|++
T Consensus 231 ----------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 231 ----------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ----------ccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1123457889999999999999999999985
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8e-36 Score=307.93 Aligned_cols=252 Identities=24% Similarity=0.326 Sum_probs=202.3
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
+|+..+.||+|+||.||++... +++.|++|.+.... ....+++.+|++++++++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677889999999999999876 57889999987653 345677999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.... ..+++..+.+++.|++.||+|||+. .+++|+||||+||++++++.+||+|||.+........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 156 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-- 156 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence 9999999998653 5689999999999999999999982 3999999999999999999999999999875322211
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....++..|+|||++.+..++.++||||||+++|||++|+.|+.......+ ... ...+.+..+....+ ..
T Consensus 157 -~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~-----~~-- 226 (265)
T cd06605 157 -KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIF-ELLQYIVNEPPPRL-----PS-- 226 (265)
T ss_pred -hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHH-HHHHHHhcCCCCCC-----Ch--
Confidence 126788999999999988999999999999999999999999864321111 111 11222222111110 00
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.....++.+++.+||..+|++|||+.|++
T Consensus 227 ----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 227 ----GKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred ----hhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 01345688999999999999999998887
No 270
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-35 Score=312.49 Aligned_cols=247 Identities=23% Similarity=0.356 Sum_probs=198.7
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 333457999999999999864 5789999998766666677899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....... ....
T Consensus 104 ~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~ 176 (292)
T cd06658 104 GALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRK 176 (292)
T ss_pred CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCc
Confidence 999998854 3489999999999999999999994 99999999999999999999999999987533222 1223
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...|+..|+|||++.+..++.++||||||+++|||++|+.||....+.. ....+... +.+.+..
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-------~~~~~~~~-----~~~~~~~---- 240 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-------AMRRIRDN-----LPPRVKD---- 240 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhc-----CCCcccc----
Confidence 3468999999999988889999999999999999999999986432211 11112111 1111110
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+.+++.+||+.+|.+|||++|+++
T Consensus 241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0112346788999999999999999999884
No 271
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.3e-35 Score=310.86 Aligned_cols=245 Identities=23% Similarity=0.354 Sum_probs=198.5
Q ss_pred cceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCC
Q 005536 328 EKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGT 406 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs 406 (692)
...+||+|+||.||++... +++.||+|.+........+.+.+|+.++..++||||+++++++...+..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999864 588999999976655566788999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccC
Q 005536 407 LCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP 486 (692)
Q Consensus 407 L~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~ 486 (692)
|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....... ......
T Consensus 105 L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~ 177 (297)
T cd06659 105 LTDIVSQ---TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSL 177 (297)
T ss_pred HHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccce
Confidence 9988754 348999999999999999999998 499999999999999999999999999987533222 222345
Q ss_pred CCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccC
Q 005536 487 QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWT 566 (692)
Q Consensus 487 ~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~ 566 (692)
.|+..|+|||++.+..++.++||||||+++|||++|+.||....+.. ....+........ . . .
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~-----~-~----~ 240 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-------AMKRLRDSPPPKL-----K-N----A 240 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhccCCCCc-----c-c----c
Confidence 68999999999998899999999999999999999999986432211 1122221111100 0 0 0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 567 LSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 567 ~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......+.+++.+||+.+|++||++.||++
T Consensus 241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 241 HKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 112346789999999999999999999985
No 272
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.4e-35 Score=304.77 Aligned_cols=259 Identities=26% Similarity=0.312 Sum_probs=201.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV~ 399 (692)
++|...++||.|++|.||++... +++.+|+|.+.... ....+++.+|++++++++||||+++++++.+. +.+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999974 47889999987543 34567799999999999999999999998654 4689999
Q ss_pred EeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 400 EFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||+++++|.+++... ....+++.....|+.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987643 23458999999999999999999999 4999999999999999999999999999875322
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.|++....... .... ....+.......+.+.
T Consensus 158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~- 231 (287)
T cd06621 158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL-GPIE-LLSYIVNMPNPELKDE- 231 (287)
T ss_pred cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC-ChHH-HHHHHhcCCchhhccC-
Confidence 11 1234578899999999988999999999999999999999999975432111 1111 1122221111111111
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.. ........+.+++.+||+.+|.+|||+.||++
T Consensus 232 ~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 PG-----NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CC-----CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00 00123467899999999999999999998873
No 273
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.9e-35 Score=302.57 Aligned_cols=249 Identities=23% Similarity=0.338 Sum_probs=195.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-----chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--Cee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-----TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~ 395 (692)
.+|...+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++|+||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999864 47899999886432 22356788999999999999999999998764 467
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++++|.+++... ..+++...++++.|++.||+|||+ .+|+|+||||+|||++.++.+||+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999998754 348889999999999999999998 49999999999999999999999999998753
Q ss_pred CCCC--CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 476 MTES--SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 476 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
.... ........|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~-~--- 226 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQP-T--- 226 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH------HHHHHHhcCC-C---
Confidence 2211 11123345889999999998888999999999999999999999998632111 1111111111 0
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. ...+......+.+++.+|+. +|++||+++||++
T Consensus 227 -~-------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 -N-------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -C-------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 11122334567889999985 8999999988873
No 274
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=317.77 Aligned_cols=244 Identities=26% Similarity=0.386 Sum_probs=201.0
Q ss_pred eecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHH
Q 005536 331 RLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQ 409 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~ 409 (692)
.||+|.||+||.|+..+ ...+|||.+...+....+-+..|+.+-++|+|+|||+++|++.+++..-|.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 59999999999999655 45699999988888888889999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-CCCceEEeeecCCccCCCCCCcccccC
Q 005536 410 HLQRERGSGL--PWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD-YNYRSKVADFGLSRLGMTESSHISTAP 486 (692)
Q Consensus 410 ~l~~~~~~~l--~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~ 486 (692)
+|...-+ ++ .+.+.-....||++||.|||+ +.|+|||||-.|||++ ..|.+||+|||-++.... -.......
T Consensus 662 LLrskWG-PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWG-PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETF 736 (1226)
T ss_pred HHHhccC-CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhcc-CCcccccc
Confidence 9987643 45 677777888999999999999 5999999999999995 678999999999986332 23344556
Q ss_pred CCCCCCCCccccccC--CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 487 QGTPGYLDPQYHQYF--HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 487 ~gt~~Y~aPE~~~~~--~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
-||..|||||++..+ .|..++|||||||++.||.||++||..-.. ++.++-+++--. .-.+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs------pqAAMFkVGmyK-----------vHP~ 799 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS------PQAAMFKVGMYK-----------VHPP 799 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC------hhHhhhhhccee-----------cCCC
Confidence 799999999998765 588899999999999999999999952211 111121222111 1123
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+.+...+...++.+|+.++|.+||+++++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 44567788899999999999999999999974
No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5e-35 Score=303.51 Aligned_cols=253 Identities=23% Similarity=0.372 Sum_probs=198.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc----------hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT----------DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG 393 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~ 393 (692)
+|...+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|+.++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667789999999999999854 588999998864211 12346788999999999999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 458999999999999999999998 499999999999999999999999999997
Q ss_pred cCCCCCC-cccccCCCCCCCCCccccccCC--CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 474 LGMTESS-HISTAPQGTPGYLDPQYHQYFH--LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 474 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
....... .......|+..|+|||.+.... ++.++||||||+++|||++|..|+...... ....+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~-~~ 229 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI------AAMFKLGNK-RS 229 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH------HHHHHhhcc-cc
Confidence 5332211 1223456899999999987654 889999999999999999999998532211 111111111 11
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
...+... ........+.+++.+||+.+|++||++.+|++
T Consensus 230 ~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 APPIPPD-------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcCCcc-------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111111 11123467889999999999999999999874
No 276
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-35 Score=305.14 Aligned_cols=249 Identities=25% Similarity=0.424 Sum_probs=202.1
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||++.... +..||+|.+.... ....+.+.+|++++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 47788999999999999999654 7889999987542 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-ceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-~~kl~DFGla~~~~~~~~ 480 (692)
+++++|.+++.......+++..++.++.|++.||+|||+ .+++|+||||+||++++++ .+||+|||.+..... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~-~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND-SM 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC-Cc
Confidence 999999999987655568999999999999999999998 4999999999999999885 569999999876432 22
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......|++.|+|||++.+..++.++||||||+++|||++|+.|+.... ......+ ...+...++.
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~-~~~~~~~~~~------ 223 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLK-ICQGYFAPIS------ 223 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHH-HhcccCCCCC------
Confidence 22234568999999999988889999999999999999999999985322 1222222 2222221110
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......+.+++.+||+.+|++|||+.||++
T Consensus 224 ------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 ------PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ------CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 112346889999999999999999999974
No 277
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=6.1e-36 Score=312.60 Aligned_cols=264 Identities=23% Similarity=0.288 Sum_probs=199.2
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..++||+|+||.||++... +++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999975 478999999865432 235678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.++.... ..+++..++.++.|++.||+|||+ .+|+|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999888776543 348999999999999999999999 499999999999999999999999999987643322
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC--cc------c
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG--CV------D 551 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~------~ 551 (692)
.......++..|+|||++.+ ..++.++||||||+++|||++|++|+......+ ...........- .. .
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID---QLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH---HHHHHHHHhCCCchhhHHHhccc
Confidence 22334567899999998865 457889999999999999999998886433211 111111110000 00 0
Q ss_pred ccccccCCcCCC------ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 552 EIIDPYLEPHRD------AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 552 ei~d~~l~~~~~------~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+.+....+... .........+.+|+.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000000 001123467899999999999999999998873
No 278
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.9e-35 Score=303.37 Aligned_cols=251 Identities=25% Similarity=0.446 Sum_probs=199.3
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC------chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD------TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
+|+..+.||+|+||.||+++. .+++.||+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999985 568899999987432 1235678999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-ceEEeeecCCccCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGM 476 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-~~kl~DFGla~~~~ 476 (692)
|+||+++++|.+++... ..+++..++.++.|++.||+|||+ .+++|+||||+||+++.++ .+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999754 458999999999999999999999 4999999999999998775 69999999987643
Q ss_pred CCCC---cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 477 TESS---HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 477 ~~~~---~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
.... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ... ...+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~-~~~~~~~~~--- 228 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LAL-IFKIASATT--- 228 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHH-HHHHhccCC---
Confidence 3211 112234688999999999888899999999999999999999999864332111 111 111111000
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
. ...+.....++.+++.+||+.+|++||++.|++
T Consensus 229 -~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 229 -A-------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred -C-------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 0 011123345788999999999999999999987
No 279
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.4e-35 Score=309.78 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=201.1
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||++.... ++.|++|.+.... ....+.+.+|+++++.++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 468889999999999999998654 6789999987553 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999764 458999999999999999999998 499999999999999999999999999987421100
Q ss_pred --------------CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHh
Q 005536 480 --------------SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI 545 (692)
Q Consensus 480 --------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~ 545 (692)
........++..|+|||++....++.++||||||+++|||++|+.||....+ .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-------~~~~~~~ 228 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-------EELFGQV 228 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHH
Confidence 0011224578899999999888899999999999999999999999863321 1112222
Q ss_pred ccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 546 GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 546 ~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
..+... .+... ......+.+++.+||+.+|++||++.++.+.|+.
T Consensus 229 ~~~~~~---~~~~~-------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 ISDDIE---WPEGD-------EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HhcccC---CCCcc-------ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 221111 11110 0133567899999999999999997666655544
No 280
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.9e-35 Score=306.90 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=206.5
Q ss_pred HHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
...+++|+..+.||+|+||.||++... +++.|++|.+..... ..+++.+|++++++++|+|++++++++...+..++|
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 346677888899999999999999976 578899999986544 567889999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+|+||+|+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 99999999999998753 469999999999999999999999 59999999999999999999999999988653222
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
. .......++..|++||++.+..++.++||||||+++|||++|+.|+....+... ...+.........+
T Consensus 170 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~--- 238 (286)
T cd06614 170 K-SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-------LFLITTKGIPPLKN--- 238 (286)
T ss_pred h-hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhcCCCCCcc---
Confidence 1 122344578999999999888899999999999999999999999864322111 11111111111100
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+.+++.+||+.+|.+||++.+|++
T Consensus 239 -------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 -------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -------hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0113357889999999999999999999974
No 281
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.5e-35 Score=307.21 Aligned_cols=266 Identities=24% Similarity=0.281 Sum_probs=197.0
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++++|...+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.+++.++|+||+++.+++.+.+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999864 588999999875532 23346789999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+. ++|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP- 156 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC-
Confidence 9995 78877776543 4578888999999999999999994 9999999999999999999999999998753221
Q ss_pred CcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC----------
Q 005536 480 SHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG---------- 548 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 548 (692)
........+++.|+|||++.+. .++.++||||||+++|||++|+.||+......+ .....+..+...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE--QLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHHHHHHHcCCCChhhhhhhhh
Confidence 1222334578999999998754 578899999999999999999999864332111 111111111100
Q ss_pred ---cccccccccCCcCCCc--cCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 549 ---CVDEIIDPYLEPHRDA--WTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 549 ---~~~ei~d~~l~~~~~~--~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...+............ ........+.+++.+|++.+|.+|||+.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 0000000000000000 0001235678999999999999999999987
No 282
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.2e-35 Score=310.18 Aligned_cols=264 Identities=23% Similarity=0.265 Sum_probs=196.5
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|+||.||+++.. +++.||+|+++... ......+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999864 58899999987542 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
++ ++|.+++.... ..+++..++.++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP-VR 154 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-CC
Confidence 96 68888887543 458999999999999999999999 49999999999999999999999999999753221 12
Q ss_pred ccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc------ccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC------VDEII 554 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~ei~ 554 (692)
......++..|+|||++.+. .++.++||||||+++|||+||+.|+.......+ ........+.... ..++.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH--HHHHHHHHhCCCChHHhHHhhhcc
Confidence 22344678999999988664 478999999999999999999988643222111 1111111111000 00000
Q ss_pred cccCCcCC------CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 555 DPYLEPHR------DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 555 d~~l~~~~------~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+....... .........++.+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 0011123467889999999999999999998873
No 283
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-36 Score=322.67 Aligned_cols=243 Identities=26% Similarity=0.450 Sum_probs=200.1
Q ss_pred ceeecccccEEEEEEEEeC-CCEEEEEEeec----CCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe--eEEEEEe
Q 005536 329 KHRLGTGAYGTVYAGKLHN-DDWVAIKRFRY----RDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE--PILVYEF 401 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~----~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~--~~lV~E~ 401 (692)
..+||+|+|-+||||.... |-.||=-.++. ..+...++|..|+.+|+.|+||||++++.++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 3479999999999998643 55555322221 235567899999999999999999999999987655 7899999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~~~~~~~ 480 (692)
+..|+|..|+.+.+ .++.+....|+.||++||.|||+. .|+|||||||..||+|+. -|.|||+|+|||.+... .
T Consensus 125 ~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~--s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK--S 199 (632)
T ss_pred ccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc--c
Confidence 99999999998764 488889999999999999999996 689999999999999975 58999999999986322 2
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
+. ..+.|||.|||||.+. ..|++..||||||+.++||+|+..|+. +..-++.+.+++-.|...+-+.+.-.
T Consensus 200 ~a-ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs------EC~n~AQIYKKV~SGiKP~sl~kV~d- 270 (632)
T KOG0584|consen 200 HA-KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS------ECTNPAQIYKKVTSGIKPAALSKVKD- 270 (632)
T ss_pred cc-ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh------hhCCHHHHHHHHHcCCCHHHhhccCC-
Confidence 22 3378999999999988 789999999999999999999998874 44456667788877766655554322
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.++.++|.+||.. ..+|||+.|+++
T Consensus 271 ----------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 ----------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 3688999999999 999999999973
No 284
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.1e-34 Score=303.74 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=200.7
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
.|...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 344567999999999999985 4678999999876655666778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||++....... ...
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~ 172 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRR 172 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC-ccc
Confidence 9999999876 3489999999999999999999994 99999999999999999999999999887533222 222
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||....+. .....+..+....+..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~-------- 237 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-------QAMKRIRDNLPPKLKN-------- 237 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-------HHHHHHHhcCCCCCcc--------
Confidence 3346899999999998888999999999999999999999998643221 1122222221111100
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.......+.+++.+||+.+|++||++.+++
T Consensus 238 --~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 238 --LHKVSPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred --cccCCHHHHHHHHHHcccChhhCcCHHHHc
Confidence 011235789999999999999999998887
No 285
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-35 Score=319.67 Aligned_cols=267 Identities=21% Similarity=0.285 Sum_probs=198.4
Q ss_pred HhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE----- 392 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~----- 392 (692)
.+.++|...+.||+|+||+||++.. .+++.||||++.... ....+++.+|+.++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4567899999999999999999985 457889999987542 23456688999999999999999999987543
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 393 -GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 393 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence 3568999998 7899887753 359999999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ .......... ..
T Consensus 165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~-~~ 236 (343)
T cd07878 165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ---LKRIMEVVGT-PS 236 (343)
T ss_pred ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHhCC-CC
Confidence 9863221 234468999999999876 5788999999999999999999999864322111 1111111100 00
Q ss_pred cccccc-----------cCCcCCC----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 551 DEIIDP-----------YLEPHRD----AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 551 ~ei~d~-----------~l~~~~~----~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+.... .+..... .........+.+|+.+||+.||.+|||+.|++ .++|...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell-------~hp~~~~ 303 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL-------AHPYFSQ 303 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHh-------cCcchhc
Confidence 000000 0000000 00001123567999999999999999999887 4677653
No 286
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.3e-35 Score=307.86 Aligned_cols=262 Identities=24% Similarity=0.336 Sum_probs=197.3
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
|+..++||.|++|.||+|... ++..||+|++.... ....+.+.+|++++++++|+|++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999864 68999999987543 223467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
+++|.+++.......+++..++.++.|++.||+|||+ ++++||||+|+||++++++.+||+|||+++..... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~-~~~ 155 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP-VRT 155 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC-ccc
Confidence 5799999987654569999999999999999999999 49999999999999999999999999999753221 112
Q ss_pred cccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc---------ccc
Q 005536 483 STAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC---------VDE 552 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~e 552 (692)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||.......+ +.. ..+...... ..+
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFR-IFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHHhCCCChHHhhhhhhchh
Confidence 2333568899999987654 578899999999999999999999864332111 000 111100000 000
Q ss_pred ccccc---CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 553 IIDPY---LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 553 i~d~~---l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..... ...............+.+++.+||+.+|++||+++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 00000 00000001112235788999999999999999999987
No 287
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.8e-35 Score=317.83 Aligned_cols=273 Identities=22% Similarity=0.283 Sum_probs=211.4
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-C-----CCeeeeEEEEEeCCe
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-H-----PNLLRLLGCCIEEGE 394 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H-----~niv~l~g~~~~~~~ 394 (692)
+.-+|.+.+.||+|.||.|-++... +++.||||+++.. +.-..+-..|+.+|..|+ | -|+|++++++...++
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 3348899999999999999999854 5899999999854 556677889999999997 5 389999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC--CceEEeeecCC
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN--YRSKVADFGLS 472 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~--~~~kl~DFGla 472 (692)
.+||+|.+ .-+|+++|+.++...++...+..|+.||+.||.+||+. +|||.||||+||||.+- ..+||+|||.|
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence 99999999 67999999999888899999999999999999999985 99999999999999654 37999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHH--------HH
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI--------DR 544 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~--------~~ 544 (692)
.... .... ....+..|.|||++.+.+|+.+.|+||||||++||++|.+.|......++......+. +.
T Consensus 339 c~~~---q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 339 CFES---QRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred cccC---Ccce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 8622 2222 4456789999999999999999999999999999999988887655544433222111 11
Q ss_pred hcc---------Cccc-----c----------------cccccCCc-CCCc----cCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 545 IGR---------GCVD-----E----------------IIDPYLEP-HRDA----WTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 545 ~~~---------~~~~-----e----------------i~d~~l~~-~~~~----~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
-.+ +... + ..+....+ .... .....-..+++++.+||..||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 100 0000 0 00111111 1111 1112335789999999999999999
Q ss_pred CHHHHHHHHHhhhhccccccc
Q 005536 590 TMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 590 sm~eVl~~L~~i~~~~~~~~~ 610 (692)
|..|.+ .++|....
T Consensus 495 tp~qal-------~Hpfl~~~ 508 (586)
T KOG0667|consen 495 TPAQAL-------NHPFLTGT 508 (586)
T ss_pred CHHHHh-------cCcccccc
Confidence 999987 67777633
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.1e-35 Score=307.60 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=202.8
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.++|...+.||+|+||.||++.. .+++.|++|.+........+.+.+|+.++++++||||+++++.+...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 36788899999999999999985 45788999998766556677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++.+. .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....... .
T Consensus 98 ~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-~ 170 (293)
T cd06647 98 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S 170 (293)
T ss_pred CCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-c
Confidence 9999999998653 48899999999999999999998 499999999999999999999999999886533222 2
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......+++.|++||.+....++.++||||||+++|||++|+.||....+..... .+..+.....
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~~~-------- 235 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPEL-------- 235 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCCCCCC--------
Confidence 2233468899999999988889999999999999999999999997543322111 0000100000
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
. ........+.+++.+||+.+|++||++.+++
T Consensus 236 -~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 236 -Q-NPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred -C-CccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 0 0112345688999999999999999999887
No 289
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.4e-34 Score=293.25 Aligned_cols=248 Identities=26% Similarity=0.430 Sum_probs=204.1
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
|+..+.||+|++|.||+++.. +++.+++|++........+++.+|++++++++|+|++++++++...+..++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 677889999999999999975 5788999999876555778899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||.+........ ..
T Consensus 82 ~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~ 155 (253)
T cd05122 82 GSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN 155 (253)
T ss_pred CcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence 99999987653 469999999999999999999999 4999999999999999999999999999876433221 34
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...++..|++||++....++.++||||||+++|||++|+.|+........ .............+.
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~-------- 220 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-------LFKIATNGPPGLRNP-------- 220 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHHhcCCCCcCcc--------
Confidence 45789999999999888899999999999999999999999864322111 111111111111111
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......+.+++.+||+.+|++|||+.|+++
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 221 --EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111356889999999999999999999874
No 290
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.4e-34 Score=301.81 Aligned_cols=251 Identities=25% Similarity=0.355 Sum_probs=193.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHH-HHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKL-LSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~i-l~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|+||.||+++.. +++.||+|+++... .....++..|+.+ ++.++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999865 58899999997653 2334566667765 566789999999999999999999999
Q ss_pred eCCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 401 FMPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|++ |+|.+++.... ...+++..++.++.|++.||+|||+. .+++||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 995 78988886532 24689999999999999999999983 38999999999999999999999999999764321
Q ss_pred CCcccccCCCCCCCCCcccccc----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQY----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 554 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ 554 (692)
...+...++..|+|||.+.+ ..++.++|+||||+++|||++|+.|+...... . ......+ .+....+.
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~-~~~~~~~-~~~~~~~~ 229 (283)
T cd06617 158 --VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP----F-QQLKQVV-EEPSPQLP 229 (283)
T ss_pred --cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC----H-HHHHHHH-hcCCCCCC
Confidence 12233468899999998754 45688999999999999999999998532111 1 1111111 11111110
Q ss_pred cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 555 DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 555 d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. .....++.+++.+||+.+|++||++.+|++
T Consensus 230 ~-----------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 A-----------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred c-----------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 012356889999999999999999988863
No 291
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=321.64 Aligned_cols=247 Identities=25% Similarity=0.384 Sum_probs=204.2
Q ss_pred ceeecccccEEEEEEEEeC--CC--EEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 329 KHRLGTGAYGTVYAGKLHN--DD--WVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
.++||+|.||.|++|.+.. |+ .||||.++..... ..++|++|+.+|-+|+|+|+++|+|+..+ ....+|+|+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 5689999999999998754 43 5899999876543 67899999999999999999999999988 67889999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc-c
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH-I 482 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~-~ 482 (692)
.|+|.+.|++.....|........+.|||.||+||.+ +++|||||..+|+||-....+||+||||.|.......+ .
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 9999999998655678888999999999999999999 59999999999999999999999999999965443322 2
Q ss_pred c-ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 483 S-TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 483 ~-~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
+ ....-...|.|||.+....++.+||||+|||+||||+| |+.||-.-.. ..+++.+.+ .
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-------~qIL~~iD~------------~ 331 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-------IQILKNIDA------------G 331 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-------HHHHHhccc------------c
Confidence 2 22234678999999999999999999999999999999 6677753322 122333332 2
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
++-..+..+.+++++++++||..+|.+|||+..|.+.+
T Consensus 332 erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 22334556889999999999999999999999997544
No 292
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.6e-35 Score=302.64 Aligned_cols=246 Identities=26% Similarity=0.393 Sum_probs=199.8
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
-|+..++||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667889999999999999864 57899999986543 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
++++|.+++.. ..+++..+..++.|++.+|.|||+ .+++|+||||+||+++.++.++|+|||++...... ...
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-~~~ 157 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIK 157 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccc-hhh
Confidence 99999999864 358999999999999999999998 59999999999999999999999999998753322 122
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
.....++..|++||++.+..++.++||||||+++|||++|..|+....+. .....+..+.... +
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~-----~---- 221 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-------KVLFLIPKNNPPT-----L---- 221 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-------HHHHHHhcCCCCC-----C----
Confidence 23346889999999998888999999999999999999999998632211 1111222211111 1
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+.+++.+||+.+|++||++.++++
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 ---EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ---CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1123356889999999999999999999986
No 293
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.5e-35 Score=299.98 Aligned_cols=266 Identities=24% Similarity=0.275 Sum_probs=210.7
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
+.|+..++||+|.-|+||++.+.+ +..+|+|++.+.. .....+.+.|-+||+.++||.++.|++.+..++..+|||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345557789999999999999876 4889999997653 344567788999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC--
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-- 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~-- 477 (692)
|||+||+|...++++.+..+++..+...|.+++-||+|||-. |||.|||||+||||.++|++-|+||.|+.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999998888899999999999999999999996 999999999999999999999999998743110
Q ss_pred -------------------------------CCC----------------------cccccCCCCCCCCCccccccCCCC
Q 005536 478 -------------------------------ESS----------------------HISTAPQGTPGYLDPQYHQYFHLS 504 (692)
Q Consensus 478 -------------------------------~~~----------------------~~~~~~~gt~~Y~aPE~~~~~~~s 504 (692)
... ..+...+||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 000 011234699999999999999999
Q ss_pred CccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccC
Q 005536 505 DKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFH 584 (692)
Q Consensus 505 ~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~ 584 (692)
.++|.|+|||+||||+.|.-||......+- + .. ++-+.+.. ... ......+.+||++.|.+|
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~T--l----~N---------Iv~~~l~F--p~~-~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKET--L----RN---------IVGQPLKF--PEE-PEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhh--H----HH---------HhcCCCcC--CCC-CcchhHHHHHHHHHhccC
Confidence 999999999999999999999975543221 1 11 12211111 111 134567889999999999
Q ss_pred CCCCCCHHHHHHHHHhhhhcccccccccC
Q 005536 585 RDMRPTMMEVAEELEHIRVSSWASNIYMG 613 (692)
Q Consensus 585 p~~RPsm~eVl~~L~~i~~~~~~~~~~~~ 613 (692)
|.+|.-...=+ .+|+.++.+.++.|+
T Consensus 376 P~kRlg~~rGA---~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 376 PSKRLGSKRGA---AEIKRHPFFEGVNWA 401 (459)
T ss_pred hhhhhccccch---HHhhcCccccCCChh
Confidence 99998622221 234567766666554
No 294
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.4e-35 Score=299.84 Aligned_cols=253 Identities=24% Similarity=0.327 Sum_probs=204.5
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
+|+..+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788899999999999999875 48899999997542 2456789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+++++|.+++... ..+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999765 468999999999999999999998 499999999999999999999999999987643321
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.|+...... ............ ...
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~--~~~------- 220 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQETA--DVL------- 220 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhccc--ccc-------
Confidence 224456889999999998888999999999999999999999998754432 112222222110 000
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
.+......+.+++.+||+.+|++||++. ++++..++|
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~R~~~~-----~~~l~~~~~ 257 (258)
T cd05578 221 ----YPATWSTEAIDAINKLLERDPQKRLGDN-----LKDLKNHPY 257 (258)
T ss_pred ----CcccCcHHHHHHHHHHccCChhHcCCcc-----HHHHhcCCC
Confidence 1112236788999999999999999984 344445554
No 295
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-34 Score=306.38 Aligned_cols=246 Identities=27% Similarity=0.405 Sum_probs=196.3
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.+.|+..+.||+|+||+||+|+.. +++.||+|.+.... ....+++.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888899999999999999865 58899999986442 23446788999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||++ |+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99996 68877776443 459999999999999999999998 49999999999999999999999999998753221
Q ss_pred CCcccccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
....+++.|+|||++. ...++.++||||||+++|||++|+.|+....... . ...+..+....
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~------~-~~~~~~~~~~~--- 233 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------A-LYHIAQNDSPT--- 233 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH------H-HHHHhcCCCCC---
Confidence 2346788999999874 4568899999999999999999999985332111 1 11111111110
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+. .......+.+++.+||+.+|++||++.+|+.
T Consensus 234 --~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 --LS------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred --CC------chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 10 1123457899999999999999999999984
No 296
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.7e-36 Score=288.76 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=206.0
Q ss_pred HHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCc--------hhHHHHHHHHHHHHhCC-CCCeeeeEEEE
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDT--------DSIDQVMNEIKLLSSVS-HPNLLRLLGCC 389 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~-H~niv~l~g~~ 389 (692)
+..-++|...+.||.|..++|-+... ..+...|+|++..... .-.+.-.+|+.||+++. ||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 34556788889999999999987764 4578899999864321 12344568999999995 99999999999
Q ss_pred EeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeee
Q 005536 390 IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADF 469 (692)
Q Consensus 390 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DF 469 (692)
......++|+|.|+.|.|+|+|... -.++++...+|+.|+.+|+.|||. +.|+||||||+|||+|++.++||+||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999864 459999999999999999999999 59999999999999999999999999
Q ss_pred cCCccCCCCCCcccccCCCCCCCCCcccccc------CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH
Q 005536 470 GLSRLGMTESSHISTAPQGTPGYLDPQYHQY------FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 470 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~ 543 (692)
|+|.... .........|||+|+|||.+.. ..|+...|.|+.||++|.|+.|.+||-.. .....+.
T Consensus 168 GFa~~l~--~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-------kQmlMLR 238 (411)
T KOG0599|consen 168 GFACQLE--PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-------KQMLMLR 238 (411)
T ss_pred ceeeccC--CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-------HHHHHHH
Confidence 9998643 3344567789999999998653 25778899999999999999999998521 2234455
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.+|... + ...+| .+....+.+|+.+||+.||.+|.|.+|++
T Consensus 239 ~ImeGkyq-F-------~speW-adis~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 239 MIMEGKYQ-F-------RSPEW-ADISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred HHHhcccc-c-------CCcch-hhccccHHHHHHHHHeeCchhcccHHHHh
Confidence 66666432 1 11122 24556789999999999999999999998
No 297
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.9e-35 Score=306.19 Aligned_cols=264 Identities=21% Similarity=0.265 Sum_probs=195.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCe-----
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGE----- 394 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~----- 394 (692)
++|+..+.||+|+||.||+|... +++.||||.++... ....+.+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999965 58899999986542 223467889999999995 6999999999987665
Q ss_pred eEEEEEeCCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeec
Q 005536 395 PILVYEFMPNGTLCQHLQRER---GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFG 470 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFG 470 (692)
.++||||+++ +|.+++.... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988887543 2358999999999999999999999 49999999999999998 8999999999
Q ss_pred CCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 471 LSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 471 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
+++..... ........+++.|+|||++.+ ..++.++||||||+++|||++|..||....+... .......+....
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIP-VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ---LLHIFKLLGTPT 232 (295)
T ss_pred cceecCCC-ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHhCCCC
Confidence 98753222 112233357889999998764 4678999999999999999999999864332211 111111111100
Q ss_pred cc---cccc-------ccCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 VD---EIID-------PYLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 ~~---ei~d-------~~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.. ...+ +... ............++.+++.+||+.+|.+||++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 00 0000 0000 000000112345788999999999999999998887
No 298
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-36 Score=314.43 Aligned_cols=244 Identities=28% Similarity=0.416 Sum_probs=202.4
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCc---hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDT---DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.|...+.||.|+||.||.++. .+.+.||||++....+ ..+.++++|+..|.+++|||++.+-||+..+...+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 466678899999999999984 5578899999986644 346678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|| -|+-.|+|.-. .++|.+..+..|..+.+.||+|||++ +.||||||+.||||.+.+.|||+|||.|.+...
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 99 67888888655 36799999999999999999999996 899999999999999999999999999876322
Q ss_pred cccccCCCCCCCCCcccc---ccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 481 HISTAPQGTPGYLDPQYH---QYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
....+|||.|||||++ ..++|+-|+||||||++-.||.-+++|....+ +..++..|..+...-+
T Consensus 179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-------AMSALYHIAQNesPtL---- 245 (948)
T KOG0577|consen 179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNESPTL---- 245 (948)
T ss_pred --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-------HHHHHHHHHhcCCCCC----
Confidence 2445899999999985 46789999999999999999999998874221 3344455554432221
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. ..+..+.+..++..||+.-|.+|||..++++
T Consensus 246 -q------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 -Q------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -C------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 1 2345678899999999999999999887653
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.1e-35 Score=306.07 Aligned_cols=261 Identities=20% Similarity=0.265 Sum_probs=197.8
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV 398 (692)
++|+..+.||+|+||.||+|+.. +++.+++|.++.... .....+.+|+.++.+++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888889999999999999975 478899999975532 2234677899999999999999999999877 889999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||++ ++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999887643 368999999999999999999998 49999999999999999999999999998764332
Q ss_pred CCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc-----------
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG----------- 546 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 546 (692)
. .......+++.|+|||.+.+. .++.++|+||||+++|||++|+.||......... ......+.
T Consensus 160 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 160 L-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQL---NKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred c-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCchHHHHHhh
Confidence 1 222334578899999988654 4688999999999999999999998744322111 11111100
Q ss_pred ------cCcccccccccCCcCCCccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 547 ------RGCVDEIIDPYLEPHRDAWTLS-SIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 547 ------~~~~~ei~d~~l~~~~~~~~~~-~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.....+.....+. ...+.. ....+.+++.+||+.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLR---KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhh---ccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000000000 011111 2456889999999999999999999873
No 300
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.3e-35 Score=302.34 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=198.6
Q ss_pred cCccceeecccccEEEEEEEE-eCCCEEEEEEeecC-CchhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeCCeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~~~~~lV~ 399 (692)
.|+..+.||+|+||.||+|+. .+++.||+|.++.. .....+++.+|+.++++++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999996 46889999998754 3445677889999999997 999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++... .+++...+.++.|++.||.|||+ .+|+|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998643 58999999999999999999998 499999999999999999999999999987643322
Q ss_pred CcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
.......|+..|+|||++.+. .++.++||||||+++|||++|+.||........ ...+..... +.+
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------~~~~~~~~~-----~~~ 222 (277)
T cd06917 156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-------MMLIPKSKP-----PRL 222 (277)
T ss_pred -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-------hhccccCCC-----CCC
Confidence 222344689999999988654 578899999999999999999999864322111 111111111 111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.. .....++.+++.+||+.+|++||++.|+++
T Consensus 223 ~~------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 223 ED------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred Cc------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 10 013357889999999999999999999974
No 301
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.4e-34 Score=301.78 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=202.6
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|+..+.||+|+||.||++... +++.||+|.++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999865 57899999987532 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||+|+|||+++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999765 458999999999999999999999 59999999999999999999999999999864332
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.....+++.|+|||.+.+...+.++||||||+++|||++|+.||..... ....+.+..+... +.
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~------~~ 218 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-------IQIYEKILEGKVR------FP 218 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCcc------CC
Confidence 2344689999999999888899999999999999999999999864331 1112222222111 00
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
......+.+++.+||+.+|.+||+. +...++++..++|..
T Consensus 219 -------~~~~~~l~~li~~~l~~~p~~R~~~--~~~~~~~l~~~~~~~ 258 (290)
T cd05580 219 -------SFFSPDAKDLIRNLLQVDLTKRLGN--LKNGVNDIKNHPWFA 258 (290)
T ss_pred -------ccCCHHHHHHHHHHccCCHHHccCc--ccCCHHHHHcCcccc
Confidence 1123567899999999999999822 112233333566654
No 302
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6e-35 Score=304.70 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=198.5
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEEEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILVYE 400 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV~E 400 (692)
|+..++||+|+||.||+|+..+ ++.+|+|++.... ....+.+.+|++++++++|+|++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 5677899999999999998664 7899999998663 33456788999999999999999999999988 88999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++ ++|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+|||+++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 997 58988886542 4689999999999999999999994 999999999999999999999999999986443332
Q ss_pred cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc---cccccc-
Q 005536 481 HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC---VDEIID- 555 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~ei~d- 555 (692)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.|++....... .....+....-. ...+.+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhccccccc
Confidence 22344567889999997764 4678999999999999999999999864432211 111111111000 000000
Q ss_pred -------cc--CCcCC-CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 -------PY--LEPHR-DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 -------~~--l~~~~-~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+. ..... +.........+.+++.+||+.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 00000 0000012467899999999999999999999874
No 303
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.1e-35 Score=305.79 Aligned_cols=264 Identities=23% Similarity=0.298 Sum_probs=197.5
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|++|+||+|+.. +++.||+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999865 578999999865432 334678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCCccCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~~~~~~ 479 (692)
|++ ++|.+++.......+++.....++.|++.||+|||+ ++|+||||+|+||++++ +..+||+|||+++.....
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 995 688888866544457888889999999999999998 49999999999999985 567999999999753222
Q ss_pred CcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc----
Q 005536 480 SHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII---- 554 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~---- 554 (692)
........+++.|+|||++.+ ..++.++||||||+++|||+||+.||......+.. ......+... ..+..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~ 232 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL---FKIFRILGTP-NEETWPGVT 232 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCC-Chhhccccc
Confidence 122234467899999998865 45789999999999999999999998654322111 1111111110 00000
Q ss_pred ---cc-----cCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 555 ---DP-----YLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 555 ---d~-----~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+. ... ............++.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000 0000001122356889999999999999999999984
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.4e-34 Score=293.32 Aligned_cols=249 Identities=27% Similarity=0.407 Sum_probs=204.2
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPILVY 399 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~lV~ 399 (692)
+|+..+.||+|++|.||+|+.. +++.|++|.+..... ...+.+.+|++++++++|+||+++++.+.+. +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 588999999976542 5678899999999999999999999999988 8899999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+++++|.+++.... .+++..++.++.|++.||+|||+ .+++|+||+|+||+++.++.+||+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998653 69999999999999999999999 499999999999999999999999999987643322
Q ss_pred Cc-ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc-Cccccccccc
Q 005536 480 SH-ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR-GCVDEIIDPY 557 (692)
Q Consensus 480 ~~-~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ei~d~~ 557 (692)
.. ......++..|++||.+.....+.++||||||++++||++|+.|+.... ..... ...+.. .....
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~-~~~~~~~~~~~~----- 224 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAA-LYKIGSSGEPPE----- 224 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHH-HHhccccCCCcC-----
Confidence 11 1344568999999999988889999999999999999999999987443 11111 111111 11111
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+......+.+++.+||+.+|++||++.|+++
T Consensus 225 -------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 -------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11123467899999999999999999999873
No 305
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.7e-35 Score=304.11 Aligned_cols=252 Identities=25% Similarity=0.316 Sum_probs=193.2
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|...++||+|+||.||+++.. +++.||+|.+.... .....++.+|+.++.++. |+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3445678999999999999864 47899999987543 345667899999999996 99999999999999999999999
Q ss_pred CCCCCHHHH---HhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 402 MPNGTLCQH---LQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 402 ~~~gsL~~~---l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+. ++|.++ +.......+++.....++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 455543 3333345699999999999999999999974 48999999999999999999999999998753322
Q ss_pred CCcccccCCCCCCCCCccccccC---CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYF---HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.......|+..|+|||++.+. .++.++||||||+++|||++|+.||.... ..... ...+..+....
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~-~~~~~~~~~~~--- 230 (288)
T cd06616 162 --IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQ-LTQVVKGDPPI--- 230 (288)
T ss_pred --CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHH-HhhhcCCCCCc---
Confidence 122334688999999998766 68999999999999999999999986332 11111 11111111111
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+... .......++.+|+.+||+.+|++||++.||+
T Consensus 231 --~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~ 265 (288)
T cd06616 231 --LSNS---EEREFSPSFVNFINLCLIKDESKRPKYKELL 265 (288)
T ss_pred --CCCc---CCCccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 1110 0122445789999999999999999998887
No 306
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.9e-34 Score=296.14 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=201.2
Q ss_pred ecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||.|+||.||+++... ++.|++|.+.... ....+.+.+|++++++++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6999999999999754 7899999987542 23456799999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++.+. ..+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||+++...... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~ 153 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC 153 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence 9999764 348999999999999999999999 599999999999999999999999999998643322 223346
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
++..|++||.+....++.++|+||||+++|||++|..|+...... ... ....+..+... ...+.
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~~~~~-----------~~~~~ 217 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED----PME-IYNDILKGNGK-----------LEFPN 217 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC----HHH-HHHHHhccCCC-----------CCCCc
Confidence 889999999998888999999999999999999999998754321 111 11112111000 00111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
....++.+++.+||+.+|++||++.+.. ++++..++|..+
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~--~~~l~~~~~~~~ 257 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGG--IKDIKKHKWFNG 257 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccC--HHHHhcChhhhC
Confidence 1245789999999999999999954432 555667888654
No 307
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1e-34 Score=305.93 Aligned_cols=269 Identities=25% Similarity=0.300 Sum_probs=200.3
Q ss_pred HHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC---
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG--- 393 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~--- 393 (692)
+...++|+..+.||+|+||+||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345678999999999999999999975 47899999997543 233456788999999999999999999987654
Q ss_pred -------eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEE
Q 005536 394 -------EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKV 466 (692)
Q Consensus 394 -------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl 466 (692)
..++|+||+++ +|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEe
Confidence 78999999975 777777654 3468999999999999999999999 49999999999999999999999
Q ss_pred eeecCCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHh
Q 005536 467 ADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI 545 (692)
Q Consensus 467 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~ 545 (692)
+|||++...............++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .......+..
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~---~~~~~~~~~~ 234 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL---AQLELISRLC 234 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHh
Confidence 9999998644333222233456889999998764 45788999999999999999999998643321 1111122211
Q ss_pred ccCcc---cccc--------cccCC--cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 546 GRGCV---DEII--------DPYLE--PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 546 ~~~~~---~ei~--------d~~l~--~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..... .++. ++... .............+.+++.+||+.+|.+||++.+|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11100 0000 00000 0000000123467899999999999999999988873
No 308
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=290.23 Aligned_cols=257 Identities=24% Similarity=0.324 Sum_probs=207.0
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.+++|+..+.||+|.|+.||+.. ...|+.+|+|.++.. ...+.+++.+|+.|-+.|+||||++|.....+....+||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 45677778899999999999876 345888888887643 344678889999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc---CCCceEEeeecCCccC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD---YNYRSKVADFGLSRLG 475 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld---~~~~~kl~DFGla~~~ 475 (692)
+|+|.|++|..-+... ...++...-....||+++|.|.|. ++|||||+||+|+||- ..--+||+|||+|...
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999998766543 236677777889999999999999 5999999999999994 4456999999999864
Q ss_pred CCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 476 MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 476 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
. ....-....|||+|||||+++..+|+..+|||+-||+||-|+.|..||.... .....+++..|..+- +
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~-------~~rlye~I~~g~yd~--~ 232 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYEQIKAGAYDY--P 232 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc-------HHHHHHHHhccccCC--C
Confidence 4 3334456689999999999999999999999999999999999999996422 223456666654321 1
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
+ ..|+ ...++..+|+.+||..||.+|.|+.|.+ .++|..
T Consensus 233 ~------~~w~-~is~~Ak~LvrrML~~dP~kRIta~EAL-------~HpWi~ 271 (355)
T KOG0033|consen 233 S------PEWD-TVTPEAKSLIRRMLTVNPKKRITADEAL-------KHPWIC 271 (355)
T ss_pred C------cccC-cCCHHHHHHHHHHhccChhhhccHHHHh-------CCchhc
Confidence 1 1121 2345678999999999999999999887 566653
No 309
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-34 Score=301.19 Aligned_cols=263 Identities=22% Similarity=0.309 Sum_probs=198.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
+|+..++||+|++|+||+|+.. +++.||||.++.... ...+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999975 578899999976533 34567789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 403 PNGTLCQHLQRER-GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 403 ~~gsL~~~l~~~~-~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+ ++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~-~~ 155 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP-VN 155 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC-cc
Confidence 7 58988887543 2458999999999999999999998 49999999999999999999999999999753221 12
Q ss_pred ccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC---------ccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG---------CVD 551 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 551 (692)
......++..|++||.+.+. .++.++||||||+++|||++|+.||......... ....+..... ...
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL---LKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHHHhCCCChhhHHHHhcCc
Confidence 22334578899999987654 5788999999999999999999998754322111 1111111000 000
Q ss_pred ccccccC---CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 552 EIIDPYL---EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 552 ei~d~~l---~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
....... ..............+.+++.+||+.+|.+||++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 279 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence 0000000 0000000112245678999999999999999998887
No 310
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=298.17 Aligned_cols=248 Identities=22% Similarity=0.349 Sum_probs=207.8
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
-|++..+||+|+||.|||+..+ .|+.||||++.. ..+.++..+|+.|+.+.+.|++|+++|.+.....+++|||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 3677889999999999999854 589999999865 4567899999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
-|++.+.+... .++|++.++-.|+...++||+|||.. .-||||||+.||||+.+|.+||+|||.|-.. .+.....
T Consensus 112 AGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL-TDTMAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL-TDTMAKR 186 (502)
T ss_pred CCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh-hhhHHhh
Confidence 99999988765 57899999999999999999999997 7899999999999999999999999999763 2334445
Q ss_pred ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCC
Q 005536 484 TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRD 563 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~ 563 (692)
..+.||+.|||||+++.-.|..++||||||++..||.-|++|+..-.|-..+. ++... .+..-
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF-------MIPT~----------PPPTF 249 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF-------MIPTK----------PPPTF 249 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-------eccCC----------CCCCC
Confidence 66789999999999999999999999999999999999999986433321110 11111 11111
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 564 AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 564 ~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+.....++.+++++||-.+|++|-|+.++++
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 223456678999999999999999999888764
No 311
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.1e-34 Score=300.15 Aligned_cols=260 Identities=23% Similarity=0.275 Sum_probs=193.4
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeC--CeeEEEEE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEE--GEPILVYE 400 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~--~~~~lV~E 400 (692)
|+..++||+|+||.||+++.. +++.||+|+++... ........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 566789999999999999854 57899999987542 223334568999999985 99999999999987 88999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++ ++|.+++.... ..++|..++.++.|++.||+|||+ .+|+||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 996 68888887543 468999999999999999999999 49999999999999999 999999999997643221
Q ss_pred cccccCCCCCCCCCccccc-cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHh-----------ccC
Q 005536 481 HISTAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-----------GRG 548 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~ 548 (692)
......++..|+|||++. +..++.++||||||+++|||++|..||....+.+. .....+.. ...
T Consensus 154 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 154 -PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred -CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHHhhccc
Confidence 122345789999999764 45678899999999999999999999965433221 11111111 111
Q ss_pred cccccccccCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 549 CVDEIIDPYLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 549 ~~~ei~d~~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+... .............+.+|+.+||+.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 10000000000 0000011134578999999999999999999999873
No 312
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.1e-35 Score=313.20 Aligned_cols=268 Identities=25% Similarity=0.338 Sum_probs=198.3
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC--Cee
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE--GEP 395 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~--~~~ 395 (692)
+.++|+..+.||+|+||.||+|... +++.+|+|++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4577888999999999999999865 5788999988643 334456788899999999 999999999998654 368
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||++ ++|.+++... .++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999888653 58899999999999999999999 49999999999999999999999999999764
Q ss_pred CCCCC----cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHH--------H
Q 005536 476 MTESS----HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA--------I 542 (692)
Q Consensus 476 ~~~~~----~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~--------~ 542 (692)
..... .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||....+.......... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 33221 12234468999999998754 46788999999999999999999998643322111000000 0
Q ss_pred HHhccCcccccccccCCcC---CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 543 DRIGRGCVDEIIDPYLEPH---RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~~~---~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+......++++...... ..........++.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 0000000111111000000 00001113467899999999999999999999985
No 313
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-34 Score=295.56 Aligned_cols=249 Identities=26% Similarity=0.430 Sum_probs=205.0
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||.|+||.||++... +++.|++|++..... ...+++.+|++++++++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999965 478999999976533 5667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 402 MPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 402 ~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
+++++|.+++.... ...+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998753 35699999999999999999999994 99999999999999999999999999997643322
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
.......|++.|+|||.+....++.++||||||+++++|++|+.|++.... .. ......+.....+
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~-~~~~~~~~~~~~~------ 223 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL------LE-LALKILKGQYPPI------ 223 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH------HH-HHHHHhcCCCCCC------
Confidence 223345688999999999888899999999999999999999999864321 11 1222222211111
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+......+.+++.+||..+|++||++.|+++
T Consensus 224 ------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 ------PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1123357889999999999999999999874
No 314
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6e-35 Score=313.14 Aligned_cols=272 Identities=23% Similarity=0.306 Sum_probs=199.4
Q ss_pred hhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----e
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----E 394 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~ 394 (692)
++++|+..++||+|+||.||+|+. .+++.||||.+.... ......+.+|+.++++++|+||+++++++.... .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 357899999999999999999985 458899999986432 334567889999999999999999999876543 5
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.++|+||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 799999996 588877754 3589999999999999999999994 999999999999999999999999999876
Q ss_pred CCCCCCc--ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc-
Q 005536 475 GMTESSH--ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV- 550 (692)
Q Consensus 475 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 550 (692)
....... ......||..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ......+.+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQE 232 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHH
Confidence 3322211 1233468999999998654 468899999999999999999999986432111 11111111111100
Q ss_pred --ccccccc-------CC-cCCCc---cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 551 --DEIIDPY-------LE-PHRDA---WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 551 --~ei~d~~-------l~-~~~~~---~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
..+.+.. .. ..... .......++.+++.+||+.+|++||++.|++ .++|....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l-------~hp~~~~~ 298 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEAL-------AHPYLEQY 298 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHh-------cCcccccc
Confidence 0000000 00 00000 0011245688999999999999999998887 45665533
No 315
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.7e-34 Score=295.74 Aligned_cols=250 Identities=27% Similarity=0.395 Sum_probs=199.6
Q ss_pred ecccccEEEEEEEEeC-CCEEEEEEeecCCc---hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT---DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||.||+++..+ ++.+++|.+..... ...+.+.+|++++++++|+||+++++.+.+.+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999765 88999999875433 4567789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC-------
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS------- 480 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~------- 480 (692)
.+++.+.. .+++..++.++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997653 68999999999999999999998 4999999999999999999999999999875332211
Q ss_pred cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.......++..|++||.+.....+.++||||||+++|||++|+.|+....+. ...+.+..+.....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~------- 221 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-------EIFQNILNGKIEWP------- 221 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCcCCC-------
Confidence 1223446788999999998888999999999999999999999998643321 11222222211100
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.. ......+.+++.+||+.+|++|||+.++.+.| .++|..
T Consensus 222 ~~----~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l----~~~~~~ 261 (265)
T cd05579 222 ED----VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK----NHPFFK 261 (265)
T ss_pred cc----ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh----cCcccc
Confidence 00 01245788999999999999999996665544 355554
No 316
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.1e-34 Score=300.01 Aligned_cols=253 Identities=23% Similarity=0.262 Sum_probs=196.9
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||+||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999754 58899999987532 23355678899999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++.......+++..++.++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++..... ........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence 999987655569999999999999999999999 4999999999999999999999999999875332 12223446
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
++..|++||++.+..++.++||||||+++|||++|+.||......... ......... . . ...+.
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~----~--~-------~~~~~ 219 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK---EELKRRTLE----M--A-------VEYPD 219 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH---HHHHhcccc----c--c-------ccCCc
Confidence 788999999998888999999999999999999999998643321110 111111110 0 0 00111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHH-HHHHHHhhhhccccc
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMME-VAEELEHIRVSSWAS 608 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~e-Vl~~L~~i~~~~~~~ 608 (692)
.....+.+++.+||+.+|++||+..| .++.| ..++|..
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l---l~h~~~~ 258 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEV---REHPLFK 258 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHH---HhChhhh
Confidence 22457889999999999999996555 33222 3466654
No 317
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.7e-34 Score=304.66 Aligned_cols=268 Identities=22% Similarity=0.281 Sum_probs=196.5
Q ss_pred cCccceeecccccEEEEEEEEeC---CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN---DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPI 396 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~ 396 (692)
+|+..++||+|+||.||+|+... ++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47778899999999999999654 7899999998642 34456788999999999999999999999988 7899
Q ss_pred EEEEeCCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC----CCceEEeee
Q 005536 397 LVYEFMPNGTLCQHLQRER---GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY----NYRSKVADF 469 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~----~~~~kl~DF 469 (692)
+||||++ ++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 47777765432 2358999999999999999999999 49999999999999999 999999999
Q ss_pred cCCccCCCCCC--cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCccccc------HHHH
Q 005536 470 GLSRLGMTESS--HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN------LAAL 540 (692)
Q Consensus 470 Gla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~------~~~~ 540 (692)
|+++....... .......++..|+|||.+.+. .++.++||||||++++||++|+.||.......... ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986432221 122334678999999987654 57899999999999999999999997543322100 0001
Q ss_pred HHHHhccCc---------cccccc---ccCCcCCCccC--------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 541 AIDRIGRGC---------VDEIID---PYLEPHRDAWT--------LSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 541 ~~~~~~~~~---------~~ei~d---~~l~~~~~~~~--------~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
....+.... ..+... ........... .....++.+++.+||+.+|++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111111000 000000 00000000000 022346889999999999999999999873
No 318
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.7e-34 Score=303.62 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=193.3
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-------
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG------- 393 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~------- 393 (692)
++|+..++||+|+||.||+++.. +++.||||.+.... ......+.+|++++++++||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46889999999999999999864 58899999986542 222345678999999999999999999987654
Q ss_pred -eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 394 -EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 394 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
..++||||+. ++|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 3499999995 5888887654 24589999999999999999999994 9999999999999999999999999999
Q ss_pred ccCCCCCC---cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 473 RLGMTESS---HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 473 ~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
........ .......++..|+|||++.+. .++.++||||||+++|||++|+.|+....+...... ...+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~----~~~~~~~ 242 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTL----ISQLCGS 242 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHHHhCC
Confidence 76432211 112334578899999987654 478899999999999999999998865433211111 1111110
Q ss_pred cccccc---------ccc-CCcCCC-c-----cCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 549 CVDEII---------DPY-LEPHRD-A-----WTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 549 ~~~ei~---------d~~-l~~~~~-~-----~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...++. +.. ...... . ........+.+|+.+||+.+|.+|||++|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 000000 000 000000 0 0001124567899999999999999999887
No 319
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.6e-34 Score=301.04 Aligned_cols=256 Identities=23% Similarity=0.264 Sum_probs=201.4
Q ss_pred cCccceeecccccEEEEEEEE----eCCCEEEEEEeecCC----chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCee
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL----HNDDWVAIKRFRYRD----TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~ 395 (692)
+|+..+.||+|+||.||+++. .+++.||||.++... ....+.+.+|++++.++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999874 346789999987532 23346788999999999 599999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998754 458999999999999999999998 59999999999999999999999999998764
Q ss_pred CCCCCcccccCCCCCCCCCccccccCC--CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 476 MTESSHISTAPQGTPGYLDPQYHQYFH--LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 476 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
............|+..|++||.+.+.. .+.++||||||+++|||++|..|+....... ......+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~---- 228 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN---SQSEISRRILKSK---- 228 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc---hHHHHHHHHHccC----
Confidence 433322233456899999999987654 7889999999999999999999986332211 1111111111110
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+. .+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 229 --~~-------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 229 --PP-------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred --CC-------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 00 0111234678999999999999999999998877664
No 320
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.5e-34 Score=292.37 Aligned_cols=246 Identities=27% Similarity=0.444 Sum_probs=201.7
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..+.||+|++|.||+++.. +++.|++|.+..... ...+++.+|++++++++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777889999999999999865 578899999986643 4667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999998765 469999999999999999999998 4999999999999999999999999999986433222
Q ss_pred ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcC
Q 005536 482 ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPH 561 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~ 561 (692)
......++..|+|||...+..++.++|||+||+++|||++|+.|+....+ ... ...........+
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~--~~~~~~~~~~~~-------- 219 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAA--LFRIVQDDHPPL-------- 219 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHH--HHHHhccCCCCC--------
Confidence 12345689999999999888889999999999999999999999863321 111 111111111111
Q ss_pred CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 562 RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 562 ~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+......+.+++.+||..+|++||++.|++
T Consensus 220 ----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 220 ----PEGISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred ----CCCCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 112235788999999999999999999987
No 321
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.8e-34 Score=299.60 Aligned_cols=265 Identities=22% Similarity=0.305 Sum_probs=196.9
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc-hhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
|+..+.||+|+||+||+|+..+ ++.|+||++..... .......+|+..+.+++ |+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 5667899999999999999764 78899999875422 23334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
+|+|.+++.......+++..++.++.|++.+|.|||+ .+++|+||+|+||++++++.++|+|||++...... ..
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PP 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CC
Confidence 8899999987654578999999999999999999999 49999999999999999999999999999753322 12
Q ss_pred cccCCCCCCCCCccccc-cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH---------HHHHhc-cCccc
Q 005536 483 STAPQGTPGYLDPQYHQ-YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL---------AIDRIG-RGCVD 551 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~-~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~---------~~~~~~-~~~~~ 551 (692)
.....++..|+|||.+. ...++.++||||||++++||++|+.||.............. ..+... .....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 23346788999999874 45688999999999999999999998865433221100000 000000 00000
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
..+..................+.+++.+||+.+|++||+++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000000000111357889999999999999999998873
No 322
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.1e-34 Score=297.27 Aligned_cols=261 Identities=27% Similarity=0.372 Sum_probs=196.3
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc--hhHHHHHHHHHHHHhC---CCCCeeeeEEEEEeCCe-----
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT--DSIDQVMNEIKLLSSV---SHPNLLRLLGCCIEEGE----- 394 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~il~~l---~H~niv~l~g~~~~~~~----- 394 (692)
|+..+.||+|+||.||+|+... ++.||+|+++.... .....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999764 88999999975422 2234566788877666 59999999999988776
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.+++|||++ ++|.+++.......+++..++.++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 5899998775545699999999999999999999994 999999999999999999999999999876
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc-
Q 005536 475 GMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI- 553 (692)
Q Consensus 475 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei- 553 (692)
..... ......++..|+|||++.+..++.++||||||+++|||++|+.|+......+ ......+..........
T Consensus 157 ~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 157 YSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---QLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred ccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---HHHHHHHHcCCCChHhcC
Confidence 43221 1123357889999999998899999999999999999999988886433211 11112221111000000
Q ss_pred ---------ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 554 ---------IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 554 ---------~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...................+.+++.+||+.+|++||++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 000000000111123346778999999999999999999987
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.8e-34 Score=302.49 Aligned_cols=249 Identities=27% Similarity=0.410 Sum_probs=196.9
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
.|+..+.||+|+||.||+++.. ++..||+|++.... ....+++.+|++++++++|+|++++++++.+.+..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3667788999999999999864 57899999987542 2344678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.+||+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 996 5888877654 3559999999999999999999998 4999999999999999999999999999875322
Q ss_pred cccccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 481 HISTAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.....|++.|+|||++. ...++.++||||||+++|||++|+.|+...... .....+..+.....
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~---- 244 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPTL---- 244 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHhccCCCC----
Confidence 12346889999999873 457889999999999999999999987532111 11111211111100
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
. .......+.+|+.+||+.+|.+||++.+|++.+..+
T Consensus 245 -~------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 245 -Q------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -C------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 0 112335688999999999999999999998655443
No 324
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-34 Score=295.55 Aligned_cols=247 Identities=26% Similarity=0.406 Sum_probs=203.2
Q ss_pred cCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..++||+|+||.||+++.. +++.+++|.+.... .....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778889999999999999754 57889999987542 34466788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 402 MPNGTLCQHLQRER--GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 402 ~~~gsL~~~l~~~~--~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
+++++|.+++.... ...+++..++.++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999987632 2458999999999999999999998 49999999999999999999999999999864332
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
......+++.|++||++.+..++.++|+||||+++|||++|+.|+...... .....+..+....+
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~------ 221 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-------DLRYKVQRGKYPPI------ 221 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCCCCC------
Confidence 223346889999999999889999999999999999999999998643221 11222222222211
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+.....++.+++.+||+.+|++||++.|+++
T Consensus 222 ------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 222 ------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1234467899999999999999999999874
No 325
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.2e-34 Score=309.75 Aligned_cols=262 Identities=24% Similarity=0.322 Sum_probs=198.0
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE----- 392 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~----- 392 (692)
...++|+..+.||+|+||.||+++.. +++.||||.+... +....+++.+|+.++++++|+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 35578999999999999999999854 6889999998643 334456788999999999999999999998643
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 393 -GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 393 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
...++||||+. ++|.+.+... +++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 35799999995 6888887643 8899999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc-----
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG----- 546 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~----- 546 (692)
++..... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||........ .......++
T Consensus 165 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~ 239 (353)
T cd07850 165 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ---WNKIIEQLGTPSDE 239 (353)
T ss_pred ceeCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHhcCCCCHH
Confidence 9863222 122334688999999999999999999999999999999999999864332111 000000000
Q ss_pred --------------cC------cccccccccCCcC-CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 547 --------------RG------CVDEIIDPYLEPH-RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 547 --------------~~------~~~ei~d~~l~~~-~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+. ...+++...+... ...........+.+++.+||+.||++|||+.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL 309 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00 0001111110000 0000112355788999999999999999999987
No 326
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.23 Aligned_cols=270 Identities=20% Similarity=0.276 Sum_probs=189.2
Q ss_pred HHhhccCccceeecccccEEEEEEEEeCC--CEEEEE------------------EeecCCchhHHHHHHHHHHHHhCCC
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHND--DWVAIK------------------RFRYRDTDSIDQVMNEIKLLSSVSH 379 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~--~~vavK------------------~~~~~~~~~~~~~~~E~~il~~l~H 379 (692)
....++|+..++||+|+||+||++.+... ..+++| +++ .......++.+|+.+|++++|
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNH 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCC
Confidence 34557899999999999999999875432 122222 111 112345678899999999999
Q ss_pred CCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 005536 380 PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERG---SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNI 456 (692)
Q Consensus 380 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NI 456 (692)
+||+++++++.+.+..++|+|++ .++|.+++..... ..........|+.|++.||+|||+ .+|+||||||+||
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NI 298 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENI 298 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHE
Confidence 99999999999999999999999 5678887764321 123455677899999999999999 4999999999999
Q ss_pred EEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcc-cCCCCCcccc
Q 005536 457 LLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKV-VDFSRPHSEV 535 (692)
Q Consensus 457 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p-~~~~~~~~~~ 535 (692)
||+.++.+||+|||+++..............||..|+|||++.+..++.++|||||||++|||++|..+ +.........
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 999999999999999986443333333445799999999999999999999999999999999998754 3322111111
Q ss_pred cHHHHHHHHhccCcccccccc-----------cCCcCCCcc-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 536 NLAALAIDRIGRGCVDEIIDP-----------YLEPHRDAW-----TLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 536 ~~~~~~~~~~~~~~~~ei~d~-----------~l~~~~~~~-----~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+ ......+.. ...++.+. .+....... .......+.+++.+||+.||.+|||+.|+++
T Consensus 379 ~~-~~~~~~~~~-~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 379 QL-LKIIDSLSV-CDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HH-HHHHHhccc-ChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 11 111111110 00011000 000000000 0011235678899999999999999999973
No 327
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.4e-34 Score=299.96 Aligned_cols=257 Identities=16% Similarity=0.202 Sum_probs=186.8
Q ss_pred hccCccceeecccccEEEEEEEEeCC----CEEEEEEeecCCchhH-----------HHHHHHHHHHHhCCCCCeeeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHND----DWVAIKRFRYRDTDSI-----------DQVMNEIKLLSSVSHPNLLRLLG 387 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~~----~~vavK~~~~~~~~~~-----------~~~~~E~~il~~l~H~niv~l~g 387 (692)
.++|...++||+|+||+||+|...++ ..+|+|.......... .....+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36799999999999999999987554 4566665433221111 11233445566778999999999
Q ss_pred EEEeCC----eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 388 CCIEEG----EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 388 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
++.... ..++++|++. .++.+.+... ...++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence 876544 3467788763 4666666543 236788899999999999999999 49999999999999999999
Q ss_pred eEEeeecCCccCCCCCCc------ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccH
Q 005536 464 SKVADFGLSRLGMTESSH------ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 537 (692)
Q Consensus 464 ~kl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~ 537 (692)
+||+|||+++........ ......||+.|+|||++.+..++.++||||||++||||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999999764322111 11234699999999999999999999999999999999999999975432221110
Q ss_pred --HHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 538 --AALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 538 --~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
...+..++.++... .......+.+++..|++.+|++||++.++.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIK--------------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhc--------------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 01122333222110 0112357889999999999999999999998763
No 328
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3e-34 Score=303.91 Aligned_cols=269 Identities=24% Similarity=0.283 Sum_probs=199.9
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--CeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEPIL 397 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~~l 397 (692)
.++|+..+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457889999999999999999964 488999999975432 2234567899999999999999999998765 46899
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||++ ++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 58988887643 5689999999999999999999994 999999999999999999999999999976432
Q ss_pred CCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccc--
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII-- 554 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~-- 554 (692)
.. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....+... .....+..+... ..+.
T Consensus 161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~---~~~~~~~~~~~~-~~~~~~ 235 (309)
T cd07845 161 PA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ---LDLIIQLLGTPN-ESIWPG 235 (309)
T ss_pred cc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCC-hhhchh
Confidence 21 22233346888999998865 4678999999999999999999999874432211 111111111100 0000
Q ss_pred -------cc-cCCcC-C---CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 555 -------DP-YLEPH-R---DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 555 -------d~-~l~~~-~---~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.. .+... . ..........+.+++.+||+.||++|||+.|++ .++|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il-------~h~~f~ 294 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL-------ESSYFK 294 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh-------cChhhc
Confidence 00 00000 0 000011245678999999999999999998887 467764
No 329
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-34 Score=299.53 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=200.6
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
|+..+.||+|++|.||+++.. +++.+++|+++.... ...+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 556788999999999999864 578899999875532 24567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
+ ++|.+++.... ..+++..++.++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+....... ..
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 6 48888887643 569999999999999999999999 499999999999999999999999999987643332 22
Q ss_pred cccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc---cccccc---
Q 005536 483 STAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC---VDEIID--- 555 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~ei~d--- 555 (692)
.....++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+. .......+.... ...+.+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCchHhcccchhhhh
Confidence 2334688899999998776 789999999999999999999998864433221 111111111110 000000
Q ss_pred c---cC----CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 556 P---YL----EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 556 ~---~l----~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
. .. .............++.+++.+||+.+|.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 00 00000111234568899999999999999999999873
No 330
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.6e-34 Score=300.49 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=193.8
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCC
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGT 406 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs 406 (692)
.+.+|.|+++.||+++. +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33455666666666654 6889999999764 34566789999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC------
Q 005536 407 LCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS------ 480 (692)
Q Consensus 407 L~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~------ 480 (692)
|.+++.......+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99999876556689999999999999999999994 999999999999999999999999998864322111
Q ss_pred cccccCCCCCCCCCcccccc--CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc---
Q 005536 481 HISTAPQGTPGYLDPQYHQY--FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID--- 555 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d--- 555 (692)
.......++..|+|||++.. ..++.++||||||+++|||++|+.||....... ...+.+. +....+++
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~------~~~~~~~-~~~~~~~~~~~ 235 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ------MLLEKVR-GTVPCLLDKST 235 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHh-ccCccccccCc
Confidence 11233457889999999865 358899999999999999999999986432211 1111111 11111111
Q ss_pred -----------------ccCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 556 -----------------PYLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 556 -----------------~~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+... ............++.+|+.+||+.+|++|||++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 293 (314)
T cd08216 236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL 293 (314)
T ss_pred hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence 0000 000111223346788999999999999999999887
No 331
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-34 Score=304.95 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=200.4
Q ss_pred ccCccceeecccccEEEEEEEEeCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E 400 (692)
..|+..++||.||.+.||++...+.+.+|+|++... +.+..+-|.+|+.+|.+|+ |.+||+|++|-..++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 468888999999999999999988899999988643 5667888999999999996 9999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|= +.+|..+|.+.......| .+..+..|++.++.++|.+ +|||-||||.|+|+-. |.+||+|||+|.....+.+
T Consensus 441 ~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 97 679999998876555556 6678899999999999996 9999999999999965 5899999999987666655
Q ss_pred ccc-ccCCCCCCCCCccccccC-----------CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 481 HIS-TAPQGTPGYLDPQYHQYF-----------HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 481 ~~~-~~~~gt~~Y~aPE~~~~~-----------~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
.+. ....||+.||+||.+... +.+.+|||||+|||||+|+.|+.||..- .+ .+.+
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n----~~aK---- 581 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----IN----QIAK---- 581 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HH----HHHH----
Confidence 443 456799999999976433 2567999999999999999999998621 11 1111
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+..+.||.-.-.+...+ ...++.++++.||+.||++||+..|++
T Consensus 582 -l~aI~~P~~~Iefp~~~--~~~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 582 -LHAITDPNHEIEFPDIP--ENDELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred -HHhhcCCCccccccCCC--CchHHHHHHHHHHhcCcccCCCcHHHh
Confidence 22334442211122111 112388999999999999999999987
No 332
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-34 Score=309.28 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=197.4
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----C
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE-----G 393 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~-----~ 393 (692)
+.++|...+.||+|+||+||+++.. +++.||||.++.. ......++.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3467899999999999999999854 5789999998753 233456778999999999999999999988654 3
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++||||+. ++|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 4799999995 7898888654 459999999999999999999998 499999999999999999999999999998
Q ss_pred cCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc-----
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR----- 547 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 547 (692)
...... .......++..|+|||.+.. ..++.++||||||+++|||++|+.||........ .....+.+..
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~ 232 (337)
T cd07858 157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ---LKLITELLGSPSEED 232 (337)
T ss_pred ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCChHH
Confidence 643221 22234467899999998764 4688999999999999999999999864322111 1111111110
Q ss_pred ------Ccccccccc---cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 548 ------GCVDEIIDP---YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 548 ------~~~~ei~d~---~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
....+.+.. ...............++.+++.+||+.+|++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 000000000 0000000011123467889999999999999999988873
No 333
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.2e-34 Score=300.49 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=196.0
Q ss_pred ceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 329 KHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
..+||+|+||.||++.. .+++.||||++........+.+.+|+.+++.++|+|++++++.+...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 35799999999999986 46889999998765555667899999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++.. ..+++.....++.|++.||+|||+ .+++||||+|+||++++++.++|+|||++....... .......
T Consensus 105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~ 177 (292)
T cd06657 105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV 177 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence 998754 348999999999999999999999 499999999999999999999999999987533222 2223446
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
|++.|++||++.+..++.++||||||+++|||++|..|+....... ....+..+.. +.+.. ..
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-------~~~~~~~~~~-----~~~~~-~~---- 240 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-------AMKMIRDNLP-----PKLKN-LH---- 240 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhhCC-----cccCC-cc----
Confidence 8899999999988889999999999999999999999986432211 1111111111 10100 00
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.....+.+++.+||+.+|.+||++.++++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 12345788999999999999999998873
No 334
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.3e-34 Score=296.20 Aligned_cols=247 Identities=20% Similarity=0.235 Sum_probs=187.9
Q ss_pred eecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHH---hCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 331 RLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLS---SVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~---~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
.||+|+||.||++... +++.+|+|.+.... ......+.+|..++. ..+|+||+.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 57899999986542 122233445554443 3479999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++...... ..
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~~ 152 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KP 152 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---Cc
Confidence 99999998754 459999999999999999999999 49999999999999999999999999998753221 12
Q ss_pred ccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....||..|+|||.+.. ..++.++||||||+++|||++|+.||.......... ....... .+..+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~------~~~~~---- 218 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTLT------VNVEL---- 218 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----HHHHhhc------CCcCC----
Confidence 33468999999998864 568899999999999999999999996443221111 1111100 01111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhhhcccccc
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRP-----TMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl~~L~~i~~~~~~~~ 609 (692)
+.....++.+++.+||+.+|++|| +++|++ .++|...
T Consensus 219 ---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~-------~h~~~~~ 260 (279)
T cd05633 219 ---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVK-------EHVFFKG 260 (279)
T ss_pred ---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH-------hCccccC
Confidence 112345788999999999999999 577665 5566544
No 335
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.5e-34 Score=299.42 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=194.7
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E 400 (692)
++|+..+.||+|+||.||+++..+ ++.||||.++... .....++..|+.++.+.. |+||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567788999999999999999765 8899999997643 334556777888777775 9999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+. ++|+||||+|+||++++++.+||+|||++.......
T Consensus 95 ~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~- 169 (296)
T cd06618 95 LMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK- 169 (296)
T ss_pred ccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-
Confidence 984 57777665533 4699999999999999999999973 489999999999999999999999999987533221
Q ss_pred cccccCCCCCCCCCccccccCC----CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 481 HISTAPQGTPGYLDPQYHQYFH----LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... ......+.......+..
T Consensus 170 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~- 241 (296)
T cd06618 170 -AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKILQEEPPSLPP- 241 (296)
T ss_pred -cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHhcCCCCCCCC-
Confidence 223345788999999987553 788999999999999999999998632111 01111111111111100
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
......++.+|+.+||+.+|++||++.++++
T Consensus 242 ---------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 242 ---------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred ---------CCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0013357899999999999999999998874
No 336
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-34 Score=310.10 Aligned_cols=273 Identities=19% Similarity=0.270 Sum_probs=201.1
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEe----CCee
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE----EGEP 395 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~----~~~~ 395 (692)
.++|+..+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478899999999999999999854 58899999987542 2345678899999999999999999998763 3468
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+. ++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6899988654 349999999999999999999999 49999999999999999999999999999753
Q ss_pred CCCCC---cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH--------HHH
Q 005536 476 MTESS---HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL--------AID 543 (692)
Q Consensus 476 ~~~~~---~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~--------~~~ 543 (692)
..... .......|+..|+|||.+.. ..++.++||||||+++|||++|+.||.............. ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 32221 11234478999999998765 4688999999999999999999999964432211110000 000
Q ss_pred HhccCcccccccccCCcCC---CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 544 RIGRGCVDEIIDPYLEPHR---DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~---~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.+......+..+..-.... .........++.+++.+||+.+|++||++.+++ .++|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l-------~~~~~~ 298 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL-------QHPFLA 298 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH-------hChhhh
Confidence 0111111111110000000 000112356789999999999999999998877 456654
No 337
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2e-33 Score=291.37 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=188.5
Q ss_pred HHHHhhccCccceee--cccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCC
Q 005536 318 EIEKATSFFSEKHRL--GTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEG 393 (692)
Q Consensus 318 el~~~~~~f~~~~~L--G~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~ 393 (692)
+.....++|+..+.+ |+|+||.||++.. .++..+|+|.+........ |+.+...+ +|+||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 334445566666665 9999999999985 4578899999875422211 22222222 6999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-ceEEeeecCC
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLS 472 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-~~kl~DFGla 472 (692)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997653 699999999999999999999994 899999999999999998 9999999998
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE 552 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 552 (692)
+..... ....++..|+|||++.+..++.++||||||+++|||++|+.||..... .......+ .... ... ..
T Consensus 158 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~-~~~~-~~~-~~ 228 (267)
T PHA03390 158 KIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESL-LKRQ-QKK-LP 228 (267)
T ss_pred eecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHH-HHhh-ccc-CC
Confidence 753221 234689999999999988999999999999999999999999973322 22222111 1111 100 00
Q ss_pred cccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCC-HHHHH
Q 005536 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPT-MMEVA 595 (692)
Q Consensus 553 i~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPs-m~eVl 595 (692)
. .......+.+++.+||+.+|.+||+ ++|++
T Consensus 229 ~------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 229 F------------IKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred c------------ccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 0 0123356889999999999999996 56665
No 338
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-33 Score=296.31 Aligned_cols=244 Identities=23% Similarity=0.273 Sum_probs=192.1
Q ss_pred cCccceeecccccEEEEEEEE----eCCCEEEEEEeecCC----chhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCee
Q 005536 325 FFSEKHRLGTGAYGTVYAGKL----HNDDWVAIKRFRYRD----TDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEP 395 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~ 395 (692)
+|+..+.||+|+||.||+++. .+++.||+|+++... ....+++.+|++++.++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477888999999999999986 367899999997532 23346788999999999 599999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++||||+++++|.+++... ..+++.....++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999764 458899999999999999999999 49999999999999999999999999999764
Q ss_pred CCCCCcccccCCCCCCCCCccccccC--CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 476 MTESSHISTAPQGTPGYLDPQYHQYF--HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 476 ~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
............|+..|+|||.+... .++.++||||||+++|||++|+.|+........ ... ..+.+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~-~~~~~~~~~~--- 229 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAE-ISRRILKSEP--- 229 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHH-HHHHhhccCC---
Confidence 33222222345689999999998653 467899999999999999999999864322111 111 1111111100
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
..+......+.+++.+||+.+|++||
T Consensus 230 ----------~~~~~~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 230 ----------PYPQEMSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred ----------CCCccCCHHHHHHHHHHhcCCHHHhc
Confidence 01112234678999999999999997
No 339
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.6e-33 Score=291.29 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=196.5
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC-----CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--Cee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR-----DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--GEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--~~~ 395 (692)
.+|+..+.||+|+||.||+++.. ++..||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888999999999999999864 5889999987532 123456788999999999999999999998764 468
Q ss_pred EEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccC
Q 005536 396 ILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~ 475 (692)
++|+||+++++|.+++... ..+++...++++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999998754 348899999999999999999998 49999999999999999999999999999753
Q ss_pred CCCC--CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccc
Q 005536 476 MTES--SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEI 553 (692)
Q Consensus 476 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei 553 (692)
.... ........++..|+|||++.+..++.++||||||+++|||++|+.||..... .....+........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~ 229 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA------MAAIFKIATQPTKP-M 229 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH------HHHHHHHHcCCCCC-C
Confidence 2211 1112334689999999999888899999999999999999999999863221 11111211111111 1
Q ss_pred ccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 554 IDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 554 ~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+....+.+.+++.+||+ +|.+||+..+++.
T Consensus 230 -----------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 230 -----------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -----------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 112334678899999999 5799999987763
No 340
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=326.26 Aligned_cols=263 Identities=27% Similarity=0.411 Sum_probs=214.8
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEeC--------CCEEEEEEeecC-CchhHHHHHHHHHHHHhC-CCCCeeeeEE
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHN--------DDWVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLLRLLG 387 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~il~~l-~H~niv~l~g 387 (692)
.++...++....+.||+|.||.|++|.... ...||||.++.. +..+.+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 556666666777799999999999998542 346999999865 345678899999999999 6999999999
Q ss_pred EEEeCCeeEEEEEeCCCCCHHHHHhhcc------C--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 005536 388 CCIEEGEPILVYEFMPNGTLCQHLQRER------G--------SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKS 453 (692)
Q Consensus 388 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~------~--------~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~ 453 (692)
+|...+..++|+||++.|+|.++|...+ . ..|+....+.++.|||.|++||++. +++||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 9999999999999999999999998876 0 1388899999999999999999994 899999999
Q ss_pred CceEEcCCCceEEeeecCCccCCCCCCcccccCCC--CCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCC
Q 005536 454 SNILLDYNYRSKVADFGLSRLGMTESSHISTAPQG--TPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSR 530 (692)
Q Consensus 454 ~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~ 530 (692)
+|||+.++..+||+|||+|+..............| ...|||||.+....++.|||||||||+||||+| |..|+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~-- 524 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG-- 524 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC--
Confidence 99999999999999999999655444443232233 446999999999999999999999999999999 5566642
Q ss_pred CcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005536 531 PHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHI 601 (692)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i 601 (692)
+.....+.+.+++|...+ .+..+.+++.+++..||+.+|++||++.|+.+.|+..
T Consensus 525 ----~~~~~~l~~~l~~G~r~~------------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 525 ----IPPTEELLEFLKEGNRME------------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----CCcHHHHHHHHhcCCCCC------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 221222345666654332 2233457889999999999999999999999999984
No 341
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=302.83 Aligned_cols=248 Identities=23% Similarity=0.260 Sum_probs=206.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
+.|..-++||+||||.||..+.. .|+.+|.|++.+. ........++|-.+|.+++.+.||.+-..+...+.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 56888899999999999988754 4888999988643 2344556789999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
..|.||+|.-||.......+++...+..|.+|+.||++||.. +||.|||||+|||||+.|+++|+|+|||..+....
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 999999999999888767799999999999999999999994 99999999999999999999999999998654433
Q ss_pred CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 480 SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
. ....+||.+|||||++++..|+...|.||||++||||+.|+.||....... -.|-+|.+..
T Consensus 342 ~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv----------------k~eEvdrr~~ 403 (591)
T KOG0986|consen 342 P--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV----------------KREEVDRRTL 403 (591)
T ss_pred c--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh----------------hHHHHHHHHh
Confidence 3 344589999999999999999999999999999999999999996332111 1112233333
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMM 592 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~ 592 (692)
.....++....++...|....|+.||.+|.--.
T Consensus 404 ~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 404 EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 333444556667888999999999999997544
No 342
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=310.71 Aligned_cols=249 Identities=24% Similarity=0.385 Sum_probs=203.2
Q ss_pred CccceeecccccEEEEEEEEeCCC-EEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~-~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
|.+...||.|+||.|||+...+.. .-|.|.+........++|+-|++||...+||+||+|++.|..++.++++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 444567999999999999876543 4567888777788899999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|.+...+... +..|+..++.-++.|++.||.|||+ +.|||||||+.|||++-+|.++|+|||.+.... ..-....
T Consensus 114 GAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~qkRD 188 (1187)
T KOG0579|consen 114 GAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STRQKRD 188 (1187)
T ss_pred chHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccch-hHHhhhc
Confidence 9998887765 5679999999999999999999999 599999999999999999999999999975421 1122234
Q ss_pred cCCCCCCCCCcccc-----ccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCC
Q 005536 485 APQGTPGYLDPQYH-----QYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLE 559 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~-----~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~ 559 (692)
...|||.|||||+. ...+|+.++||||||++|.||..+.+|-. +.+. ..++-++.+.....++.|
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh------elnp-MRVllKiaKSePPTLlqP--- 258 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH------ELNP-MRVLLKIAKSEPPTLLQP--- 258 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc------ccch-HHHHHHHhhcCCCcccCc---
Confidence 56799999999974 56689999999999999999999987753 3332 233334444444433333
Q ss_pred cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 560 PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 560 ~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
-.....+.+++.+||..||+.||++.++++
T Consensus 259 -------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 259 -------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 123356889999999999999999998874
No 343
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.2e-33 Score=287.97 Aligned_cols=249 Identities=25% Similarity=0.338 Sum_probs=192.2
Q ss_pred eeecccccEEEEEEEEe-CCCEEEEEEeecCCc---hhHHHHHHHHHHH-HhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT---DSIDQVMNEIKLL-SSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il-~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.||+|+||.||+++.. +++.||+|.++.... .....+..|..++ ...+|+|++++++++.+.+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999864 578999999875432 2233445555544 455899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||+++.... ..
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~ 151 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NK 151 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cc
Confidence 9999999764 458999999999999999999999 4999999999999999999999999999875322 23
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...++..|++||.+.+..++.++||||||+++|||++|..|+...... .....+..+.... ....
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~~~------ 216 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-------AVFDNILSRRINW--PEEV------ 216 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcccCC--CCcc------
Confidence 346889999999998888899999999999999999999998643221 1122222221110 0000
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.......+.+++.+||+.+|++||++.++.+. ..++|..
T Consensus 217 -~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~----l~~~~~~ 255 (260)
T cd05611 217 -KEFCSPEAVDLINRLLCMDPAKRLGANGYQEI----KSHPFFK 255 (260)
T ss_pred -cccCCHHHHHHHHHHccCCHHHccCCCcHHHH----HcChHhh
Confidence 01234578899999999999999987766543 3445554
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.5e-33 Score=295.80 Aligned_cols=245 Identities=26% Similarity=0.390 Sum_probs=193.8
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
+.|+..+.||+|+||+||+|+.. +++.+++|.+... .....+++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999964 5788999998643 2234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES 479 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~ 479 (692)
||+. |+|.+++... ...+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-- 167 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 167 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecC--
Confidence 9996 6888877654 3458999999999999999999998 4999999999999999999999999999875322
Q ss_pred CcccccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 480 SHISTAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 480 ~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.....+++.|+|||++. ...++.++||||||+++|||++|+.|+...... .....+.++......
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-- 235 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPALQ-- 235 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-------HHHHHHhhcCCCCcC--
Confidence 12346789999999874 356788999999999999999999987532211 111112221111110
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.......+.+|+.+||+.+|++||++.+|++
T Consensus 236 ---------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 236 ---------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred ---------cccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 1123356889999999999999999999884
No 345
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.2e-34 Score=300.45 Aligned_cols=265 Identities=22% Similarity=0.244 Sum_probs=194.4
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCch--hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC------
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG------ 393 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~niv~l~g~~~~~~------ 393 (692)
.++|+..++||+|+||.||+++.. +++.||||++...... ....+.+|++++++++|+||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999865 5789999998754322 2346789999999999999999999876543
Q ss_pred --eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 394 --EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 394 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
..++|+||+. ++|...+... ...+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 4699999995 5777777654 3469999999999999999999999 4999999999999999999999999999
Q ss_pred CccCCCCCC----------cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH
Q 005536 472 SRLGMTESS----------HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 472 a~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~ 540 (692)
++....... ...+...+++.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~---~~~~ 238 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID---QLHL 238 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH---HHHH
Confidence 975332111 11233457889999998765 458899999999999999999999986433321 1111
Q ss_pred HHHHhccCc---------ccccc----cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 541 AIDRIGRGC---------VDEII----DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 541 ~~~~~~~~~---------~~ei~----d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.......-. ..... ..................+.+++.+||+.+|++|||+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 111111100 00000 00000000000011225688999999999999999998887
No 346
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.7e-34 Score=293.03 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=194.4
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecC-----CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR-----DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+|...++||+|+||+||+++... +..+++|.++.. ......++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788899999999999998644 344566665432 123345677899999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 399 YEFMPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
|||+++++|.+++... ....+++..++.++.|++.||.|||+ .+++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988753 23569999999999999999999999 49999999999999986 469999999987643
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.. ........|++.|+|||++.+..++.++|+||||+++|+|++|+.|+.... .... ...+..+....
T Consensus 157 ~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~-~~~~~~~~~~~---- 224 (260)
T cd08222 157 GS-CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSV-VLRIVEGPTPS---- 224 (260)
T ss_pred CC-cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHH-HHHHHcCCCCC----
Confidence 22 222334568899999999988889999999999999999999999985322 1111 11121121111
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+.....++.+++.+||+.+|++||++.|+++
T Consensus 225 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 --------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11234457889999999999999999999873
No 347
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5e-33 Score=297.25 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=191.5
Q ss_pred eeccc--ccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 331 RLGTG--AYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 331 ~LG~G--~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
.||+| +||+||+++.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|+||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 56666 99999999864 68999999987543 234577889999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc---
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI--- 482 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~--- 482 (692)
+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++||+.+..........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 99999987655568999999999999999999998 599999999999999999999999998653321111100
Q ss_pred ---cccCCCCCCCCCccccccC--CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc--------
Q 005536 483 ---STAPQGTPGYLDPQYHQYF--HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC-------- 549 (692)
Q Consensus 483 ---~~~~~gt~~Y~aPE~~~~~--~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 549 (692)
.....++..|++||++.+. .++.++||||||+++|||++|+.||....... .....+....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ------MLLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH------HHHHHhcCCCCCCccccc
Confidence 1112356779999998763 57899999999999999999999986432111 1111111000
Q ss_pred ----------------------------ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 ----------------------------VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 ----------------------------~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...+.+..+. ..........+.+|+.+||+.||++|||+.|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR---TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred cchhhhhhccchhhhhcccccchhcccccccccccccc---chhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000011110 111223556789999999999999999999997
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.5e-34 Score=304.62 Aligned_cols=262 Identities=23% Similarity=0.280 Sum_probs=199.5
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-----eeE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG-----EPI 396 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~-----~~~ 396 (692)
+|+..+.||+|+||.||+++..+ ++.||||++.... ....+.+.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47788999999999999999754 8899999987643 445678999999999999999999999988775 789
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+||||++ ++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 5898888654 369999999999999999999999 499999999999999999999999999998643
Q ss_pred CCCC--cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc----
Q 005536 477 TESS--HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC---- 549 (692)
Q Consensus 477 ~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 549 (692)
.... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+.. .........-.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~ 231 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQL---NLIVEVLGTPSEEDL 231 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHH---HHHHHhcCCCChhHh
Confidence 3221 122344678999999999887 8899999999999999999999998654322111 11111110000
Q ss_pred -------ccccccc---cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 -------VDEIIDP---YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 -------~~ei~d~---~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..+.+.. ................+.+++.+||+.+|++||++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 287 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEAL 287 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 0000000 000000000112345788999999999999999999887
No 349
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-33 Score=294.21 Aligned_cols=261 Identities=25% Similarity=0.325 Sum_probs=198.2
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
|+..+.||+|+||.||+|+..+ ++.||+|.++... ....+.+.+|+.++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 4566789999999999999764 8899999998653 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
+ ++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||+|+||++++++.+||+|||+++...... ..
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL-RT 154 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-cc
Confidence 7 69999998653 459999999999999999999999 499999999999999999999999999997643222 12
Q ss_pred cccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc------------
Q 005536 483 STAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC------------ 549 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------------ 549 (692)
.....++..|+|||.+.+. .++.++||||||+++|||++|+.||........ .....+......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhccccc
Confidence 2334567889999998766 889999999999999999999988864332111 111111111000
Q ss_pred ccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 VDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 ~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.......................+.+++.+||+.+|++||++.+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 0000000000000000011245789999999999999999999987
No 350
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.1e-33 Score=304.10 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=191.2
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC------
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG------ 393 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~------ 393 (692)
.++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999854 58899999987532 233456889999999999999999999987543
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++|+||+. .+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4689999995 47766542 3589999999999999999999994 99999999999999999999999999987
Q ss_pred cCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH---------
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID--------- 543 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~--------- 543 (692)
.... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ......
T Consensus 166 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~ 238 (342)
T cd07879 166 HADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGPEF 238 (342)
T ss_pred CCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHH
Confidence 5321 1233467889999998865 4688999999999999999999999974332111 111111
Q ss_pred --HhccCcccccccc---cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 544 --RIGRGCVDEIIDP---YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 544 --~~~~~~~~ei~d~---~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+........... ...............++.+|+.+||+.+|++||++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0000000000000 000000000001234678999999999999999999987
No 351
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9.9e-33 Score=293.02 Aligned_cols=242 Identities=27% Similarity=0.398 Sum_probs=192.4
Q ss_pred CccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 326 FSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
|...++||+|+||+||+|+.. +++.|++|++.... ....+++.+|++++++++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999864 57889999987542 23446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+. ++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~----- 172 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSS----- 172 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccC-----
Confidence 95 6888877654 3468999999999999999999998 499999999999999999999999999986421
Q ss_pred ccccCCCCCCCCCccccc---cCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 482 ISTAPQGTPGYLDPQYHQ---YFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~---~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
......|+..|+|||++. ...++.++||||||+++|||++|..|+........ . ..+..........
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~------~-~~~~~~~~~~~~~--- 242 (313)
T cd06633 173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------L-YHIAQNDSPTLQS--- 242 (313)
T ss_pred CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH------H-HHHHhcCCCCCCc---
Confidence 123446889999999874 45688899999999999999999999864322111 1 1111111111111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
......+.+|+.+||+.+|.+||++.+++
T Consensus 243 --------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l 271 (313)
T cd06633 243 --------NEWTDSFRGFVDYCLQKIPQERPASAELL 271 (313)
T ss_pred --------cccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11224578999999999999999999887
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.9e-33 Score=301.26 Aligned_cols=269 Identities=20% Similarity=0.219 Sum_probs=198.3
Q ss_pred ccCcc-ceeecccccEEEEEEEEe-CCCEEEEEEeecCCchh--------------HHHHHHHHHHHHhCCCCCeeeeEE
Q 005536 324 SFFSE-KHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDS--------------IDQVMNEIKLLSSVSHPNLLRLLG 387 (692)
Q Consensus 324 ~~f~~-~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~il~~l~H~niv~l~g 387 (692)
++|.. .+.||+|+||+||++... +++.||||.++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45543 467999999999999864 58899999987542221 125789999999999999999999
Q ss_pred EEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEe
Q 005536 388 CCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVA 467 (692)
Q Consensus 388 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~ 467 (692)
++...+..++||||++ |+|.+++... ..+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999996 6999988653 458999999999999999999998 499999999999999999999999
Q ss_pred eecCCccCCCC-------------CCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcc
Q 005536 468 DFGLSRLGMTE-------------SSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHS 533 (692)
Q Consensus 468 DFGla~~~~~~-------------~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~ 533 (692)
|||+++..... .........++..|+|||++.+. .++.++||||||+++|||++|+.||.......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99998753310 01111233468899999998764 46889999999999999999999987543321
Q ss_pred cccHHHHHHHHhccCcccccc-----------cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 534 EVNLAALAIDRIGRGCVDEII-----------DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~ei~-----------d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.........+......+. .+...............++.+++.+||+.+|++||++.|++
T Consensus 242 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l------- 311 (335)
T PTZ00024 242 ---QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL------- 311 (335)
T ss_pred ---HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh-------
Confidence 112222222211100000 00000000000012245688999999999999999999887
Q ss_pred hccccc
Q 005536 603 VSSWAS 608 (692)
Q Consensus 603 ~~~~~~ 608 (692)
.++|..
T Consensus 312 ~~~~~~ 317 (335)
T PTZ00024 312 KHEYFK 317 (335)
T ss_pred cCcccC
Confidence 467764
No 353
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.2e-33 Score=298.82 Aligned_cols=267 Identities=21% Similarity=0.270 Sum_probs=197.9
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe-CC
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE-EG 393 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~-~~ 393 (692)
++..++++|+..+.||+|+||.||++... +++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34557889999999999999999999854 6889999988643 22345678899999999999999999999876 46
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..++|+||+ +++|.+++.. ..+++.....++.|++.||+|||+ .+|+||||+|+|||+++++.+||+|||+++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999998 6789888764 347888889999999999999999 499999999999999999999999999987
Q ss_pred cCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH--------HHHHH
Q 005536 474 LGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA--------LAIDR 544 (692)
Q Consensus 474 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~--------~~~~~ 544 (692)
.... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||............. .+.+.
T Consensus 157 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDP----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCC----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 5321 1123457889999998765 578999999999999999999999986443211110000 00111
Q ss_pred hccCcccccccccCCcCC---CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 545 IGRGCVDEIIDPYLEPHR---DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 545 ~~~~~~~ei~d~~l~~~~---~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+..+...+++........ ..........+.+++.+||+.+|++||++.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 111111111100000000 000011236788999999999999999988876
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.1e-33 Score=288.53 Aligned_cols=240 Identities=20% Similarity=0.222 Sum_probs=185.1
Q ss_pred eecccccEEEEEEEEe-CCCEEEEEEeecCCc---hhHHHHHHHHH---HHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 331 RLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDT---DSIDQVMNEIK---LLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~---il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
.||+|+||.||+++.. +++.||+|.+..... .....+..|.. +++...||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999864 478999999875421 22223444544 4445679999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~ 152 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KP 152 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CC
Confidence 99999988653 459999999999999999999999 49999999999999999999999999998753221 12
Q ss_pred ccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 484 TAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
....|+..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ........ +..+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~------~~~~---- 218 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTLTM------AVEL---- 218 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhhcc------CCCC----
Confidence 234689999999998754 68999999999999999999999997543221111 11111110 1111
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRP-----TMMEVA 595 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RP-----sm~eVl 595 (692)
+.....++.+++.+||..+|.+|| ++.|++
T Consensus 219 ---~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 253 (278)
T cd05606 219 ---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 253 (278)
T ss_pred ---CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHH
Confidence 111235788999999999999999 888886
No 355
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.4e-33 Score=301.88 Aligned_cols=266 Identities=22% Similarity=0.283 Sum_probs=198.3
Q ss_pred ChHHHHHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEe
Q 005536 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391 (692)
Q Consensus 315 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~ 391 (692)
...++..++++|...+.||+|+||.||++.. .+++.||+|+++... ....+.+.+|+.++++++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456777889999999999999999999985 468899999987532 2335678899999999999999999998864
Q ss_pred C------CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceE
Q 005536 392 E------GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSK 465 (692)
Q Consensus 392 ~------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~k 465 (692)
. ...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEE
Confidence 3 3467888887 7899888764 348999999999999999999999 4999999999999999999999
Q ss_pred EeeecCCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Q 005536 466 VADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDR 544 (692)
Q Consensus 466 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~ 544 (692)
|+|||+++.... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ......
T Consensus 161 l~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~ 233 (345)
T cd07877 161 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---KLILRL 233 (345)
T ss_pred Eecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHH
Confidence 999999875321 2234467899999998766 56888999999999999999999998643321111 111110
Q ss_pred hccCcccccc---------------cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 545 IGRGCVDEII---------------DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 545 ~~~~~~~ei~---------------d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.. ....++. +................++.+++.+||+.+|.+||++.+++
T Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 298 (345)
T cd07877 234 VG-TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298 (345)
T ss_pred hC-CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHh
Confidence 00 0000000 00000000000001234678999999999999999988887
No 356
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.8e-33 Score=292.53 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=198.4
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV 398 (692)
++|...+.||+|+||.||+++.. +++.|++|.+... .....+.+.+|++++++++ |+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999865 6889999998753 2334567889999999998 99999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+++++|.+++... ..+++..++.|+.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999765 3699999999999999999999984 9999999999999999999999999998753322
Q ss_pred CC-------------------cccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH
Q 005536 479 SS-------------------HISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA 539 (692)
Q Consensus 479 ~~-------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~ 539 (692)
.. .......++..|++||.+....++.++||||||++++||++|+.|+...... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~ 229 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------L 229 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH------H
Confidence 21 1122345789999999998888999999999999999999999998743311 1
Q ss_pred HHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 005536 540 LAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMME 593 (692)
Q Consensus 540 ~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~e 593 (692)
..+.+..... ..+......+.+++.+||+.+|++||++.+
T Consensus 230 -~~~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 269 (280)
T cd05581 230 -TFQKILKLEY-------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNE 269 (280)
T ss_pred -HHHHHHhcCC-------------CCCCccCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1111111100 011122456889999999999999999933
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.4e-33 Score=301.70 Aligned_cols=267 Identities=20% Similarity=0.265 Sum_probs=197.0
Q ss_pred HHHHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCC-
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEG- 393 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~- 393 (692)
.+....++|+..+.||+|+||+||++.. .++..||||++.... ....+.+.+|++++++++|+||+++++++....
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 3455678899999999999999999985 468899999986432 233457889999999999999999999987543
Q ss_pred -----eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEee
Q 005536 394 -----EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVAD 468 (692)
Q Consensus 394 -----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~D 468 (692)
..++||||+ +++|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEee
Confidence 458999999 7799888764 358999999999999999999999 4999999999999999999999999
Q ss_pred ecCCccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccH--------HH
Q 005536 469 FGLSRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL--------AA 539 (692)
Q Consensus 469 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~--------~~ 539 (692)
||+++.... ......+++.|++||.+.+ ..++.++||||||+++|+|++|+.||........... ..
T Consensus 162 fg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 162 FGLARQTDS----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred ccccccccc----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 999975322 1223467899999998875 4688999999999999999999999864322110000 00
Q ss_pred HHHHHhccCcccccccc--cCC-cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 540 LAIDRIGRGCVDEIIDP--YLE-PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 540 ~~~~~~~~~~~~ei~d~--~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.+.+........... ... .............+.+++.+||+.+|++|||+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 01111111100000000 000 000000012234678999999999999999999887
No 358
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-33 Score=301.09 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=202.3
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
.-...|...+.||+|.|++|.+++.. .+..||||.+.+. +....+.+.+|+++|+.|+|||||+++.+......+++
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34567888999999999999999854 4889999998765 33444568999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
||||+.+|.+++||.+.. .+.......+..|+.+|++|||+ +.|+|||||++|||||.+.++||+|||++..+.
T Consensus 133 V~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999998764 35558888999999999999999 599999999999999999999999999998643
Q ss_pred CCCcccccCCCCCCCCCccccccCCC-CCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHL-SDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.........|++.|.|||++.+..| .++.|+||+|++||-|+.|..||+...-.+- .++...|+..
T Consensus 207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-------r~rvl~gk~r----- 273 (596)
T KOG0586|consen 207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-------RPRVLRGKYR----- 273 (596)
T ss_pred -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-------cchheeeeec-----
Confidence 4455567789999999999988876 4689999999999999999999985432111 1111111110
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.+.-...+.-+|++++|-.+|.+|++++++.
T Consensus 274 --------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 274 --------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIM 304 (596)
T ss_pred --------ccceeechhHHHHHHhhccCccccCCHHHhh
Confidence 0111223566899999999999999987775
No 359
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=9.4e-33 Score=282.28 Aligned_cols=245 Identities=26% Similarity=0.347 Sum_probs=198.7
Q ss_pred ecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 332 LGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
||+|+||.||+++.. +++.+++|.++... ....+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999865 47899999987543 23566889999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCC
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ 487 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 487 (692)
.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++....... .......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~ 154 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFC 154 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCc
Confidence 9999765 358999999999999999999999 599999999999999999999999999997643221 2234556
Q ss_pred CCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 488 GTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 488 gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
++..|++||...+...+.++|+||||+++|||++|+.||..... ....+.+.++.. ..+.
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~-------------~~~~ 214 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------KEIYEKILKDPL-------------RFPE 214 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCCC-------------CCCC
Confidence 89999999999888889999999999999999999999864321 111222222111 0111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
.....+.+++.+||..+|++||++.+ +++++.++|
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~----~~~l~~~~~ 249 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG----AEEIKAHPF 249 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc----HHHHHhCCC
Confidence 12357789999999999999999966 455556665
No 360
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=291.02 Aligned_cols=256 Identities=21% Similarity=0.301 Sum_probs=209.5
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
+..-|+..+.||+|.|..|-+++ .-.|..||||++.+.. .....++.+|+.-|+.++|||||+|+.+......+|||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 44567777889999999999887 4579999999997653 33456788999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-CCCceEEeeecCCccCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD-YNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld-~~~~~kl~DFGla~~~~~ 477 (692)
+|+-.+|+|++||-+.. ..+.+....+.+.||..|+.|+|+. .++||||||+||.+- .-|-+||.|||++-.+.
T Consensus 96 LELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~- 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ- 170 (864)
T ss_pred EEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC-
Confidence 99999999999998764 5599999999999999999999996 899999999999875 56789999999986532
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCC-ccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSD-KSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
.....+...|...|-|||.+.+..|+. +.||||||||||-|++|+.||...+..+-. .-|+|=
T Consensus 171 -PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL---------------TmImDC 234 (864)
T KOG4717|consen 171 -PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL---------------TMIMDC 234 (864)
T ss_pred -CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh---------------hhhhcc
Confidence 234456678999999999999988874 789999999999999999999754432221 122222
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.-..+.....+..+||..||..||++|.+.+|| ...+|....
T Consensus 235 -----KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI-------~s~~Wlq~~ 276 (864)
T KOG4717|consen 235 -----KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEI-------VSTSWLQAG 276 (864)
T ss_pred -----cccCchhhhHHHHHHHHHHHhcCchhhccHHHH-------hccccccCC
Confidence 112234556788999999999999999995554 578887543
No 361
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.2e-33 Score=298.34 Aligned_cols=262 Identities=23% Similarity=0.257 Sum_probs=190.4
Q ss_pred cCccceeecccccEEEEEEEEeC---CCEEEEEEeecC--CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC----Ce
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN---DDWVAIKRFRYR--DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE----GE 394 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~---~~~vavK~~~~~--~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~----~~ 394 (692)
+|+..+.||+|+||.||+++... +..||+|++... .....+.+.+|+.++.++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 47788899999999999998643 678999998643 223356788999999999 599999999976543 35
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.++++||+. ++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788889885 7899988653 458999999999999999999998 4999999999999999999999999999975
Q ss_pred CCCCCC---cccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc----
Q 005536 475 GMTESS---HISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG---- 546 (692)
Q Consensus 475 ~~~~~~---~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~---- 546 (692)
...... .......||..|+|||++.+ ..++.++||||||+++|||++|+.||....... ........+.
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~ 231 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQVLGTPDE 231 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHHHhCCCCH
Confidence 332111 11233468999999998765 468899999999999999999999986433211 1111111110
Q ss_pred -------cCccccccc---ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 547 -------RGCVDEIID---PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 547 -------~~~~~ei~d---~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
......... .................+.+++.+||+.+|++|||+.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000000000 0000000000011235788999999999999999998876
No 362
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=276.33 Aligned_cols=246 Identities=23% Similarity=0.375 Sum_probs=194.9
Q ss_pred ceeecccccEEEEEEEEe-CCCEEEEEEeecC-CchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 329 KHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
...||.|..|.|++.+.. .|...|||.+... +.++.++.+..+.++..-+ .|.||+.+|+|..+...++.||.| .-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-ST 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HH
Confidence 457999999999999865 4789999999765 4566778888888877664 899999999999999999999998 33
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
-++.+|... ..++++...-++...+.+||.||.+. .+|||||+||+|||+|+.|++|++|||++-...+ +...+.
T Consensus 176 C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd--SkAhtr 250 (391)
T KOG0983|consen 176 CAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKAHTR 250 (391)
T ss_pred HHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeec--cccccc
Confidence 455555544 45699999999999999999999986 7999999999999999999999999999865433 334466
Q ss_pred CCCCCCCCCcccccc---CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 486 PQGTPGYLDPQYHQY---FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~---~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
..|.+.|||||.+.- ..|+.++||||||+.|+||.||+.|+.....+-+ .+..+.+.. -|.+.++
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe------~ltkvln~e-----PP~L~~~- 318 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE------VLTKVLNEE-----PPLLPGH- 318 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH------HHHHHHhcC-----CCCCCcc-
Confidence 689999999998853 4688899999999999999999999975432211 122222211 1333322
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
+.....+.+++..||+.|+.+||...++++
T Consensus 319 ----~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 ----MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ----cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 124567899999999999999999999874
No 363
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.3e-33 Score=301.64 Aligned_cols=269 Identities=21% Similarity=0.297 Sum_probs=197.6
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC---------
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--------- 392 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--------- 392 (692)
..+|...+.||+|+||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 468899999999999999999864 5789999999877666778899999999999999999999876543
Q ss_pred -----CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-CCCceEE
Q 005536 393 -----GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD-YNYRSKV 466 (692)
Q Consensus 393 -----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld-~~~~~kl 466 (692)
...++||||++ ++|.+++.. ..+++...+.++.|++.||.|||+. +|+||||||+||+++ +++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 689888754 3489999999999999999999984 999999999999997 4567899
Q ss_pred eeecCCccCCCCCCc--ccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH
Q 005536 467 ADFGLSRLGMTESSH--ISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 467 ~DFGla~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~ 543 (692)
+|||+++........ ......++..|+|||.+.. ..++.++||||||+++|||++|+.||....+..... ...+
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~---~~~~ 233 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ---LILE 233 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHH
Confidence 999999753221111 1123457889999997644 568889999999999999999999996443321110 0010
Q ss_pred Hhcc-----------CcccccccccCCcC--CCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 544 RIGR-----------GCVDEIIDPYLEPH--RDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 544 ~~~~-----------~~~~ei~d~~l~~~--~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.... .............. ..........++.+++.+||+.+|++||++.|++ .++|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell-------~h~~~~ 304 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL-------MHPYMS 304 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh-------CCCccc
Confidence 0000 00000000000000 0000012335688999999999999999988887 567765
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.5e-34 Score=305.18 Aligned_cols=272 Identities=22% Similarity=0.291 Sum_probs=201.2
Q ss_pred HhhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCe---
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGE--- 394 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~--- 394 (692)
.+.++|+..+.||+|+||.||+|+.. +++.||||++... .....+++.+|+.++++++|+|++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 45678999999999999999999975 4788999998653 23345677889999999999999999998776554
Q ss_pred ---eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 395 ---PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 395 ---~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999999 6799998865 3589999999999999999999994 999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHH--------HHH
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA--------LAI 542 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~--------~~~ 542 (692)
+...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||............. ...
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 9753221 234467889999998765 367899999999999999999999986443221110000 000
Q ss_pred HHhccCcccccccccCC---cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 543 DRIGRGCVDEIIDPYLE---PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 543 ~~~~~~~~~ei~d~~l~---~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
.++........+..... ............++.+++.+||+.+|++|||+.||+ .++|....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell-------~h~~~~~~ 304 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL-------AHPYLAEY 304 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHh-------cCCCcccc
Confidence 11110000000000000 000000011245788999999999999999998886 56776543
No 365
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-33 Score=320.21 Aligned_cols=254 Identities=26% Similarity=0.357 Sum_probs=192.4
Q ss_pred HHhhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC-chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD-TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE----- 392 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~----- 392 (692)
-+....|++.+.||+||||.|||++. -||+.||||++.... ........+|+++|++|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 34567788899999999999999984 479999999998653 33455678999999999999999998321100
Q ss_pred --------------------------------------------------------------------------------
Q 005536 393 -------------------------------------------------------------------------------- 392 (692)
Q Consensus 393 -------------------------------------------------------------------------------- 392 (692)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 005536 393 ----------------------------------GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYL 438 (692)
Q Consensus 393 ----------------------------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yL 438 (692)
..+||-||||+.-+|.+++..+.... .....++++.+|++||+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 12467889998888888777654221 4667789999999999999
Q ss_pred HhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC------C-----------CCCcccccCCCCCCCCCccccccC
Q 005536 439 HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM------T-----------ESSHISTAPQGTPGYLDPQYHQYF 501 (692)
Q Consensus 439 H~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~------~-----------~~~~~~~~~~gt~~Y~aPE~~~~~ 501 (692)
|+. +||||||||.||+||++..+||+|||+|.... . ......+...||.-|+|||++.+.
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 995 99999999999999999999999999997611 0 011133556799999999998765
Q ss_pred C---CCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHH
Q 005536 502 H---LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAF 578 (692)
Q Consensus 502 ~---~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~ 578 (692)
. |+.|+|+||+||||+||+.- |...- -....+..++++.+.+--| + ..+....=+.++.
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsM------ERa~iL~~LR~g~iP~~~~--f-------~~~~~~~e~slI~ 852 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLYP---FGTSM------ERASILTNLRKGSIPEPAD--F-------FDPEHPEEASLIR 852 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhcc---CCchH------HHHHHHHhcccCCCCCCcc--c-------ccccchHHHHHHH
Confidence 4 99999999999999999873 43111 1223455666665554311 1 1122233468999
Q ss_pred HhcccCCCCCCCHHHHH
Q 005536 579 RCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 579 ~Cl~~~p~~RPsm~eVl 595 (692)
++++.||.+|||+.|++
T Consensus 853 ~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 853 WLLSHDPSKRPTATELL 869 (1351)
T ss_pred HHhcCCCccCCCHHHHh
Confidence 99999999999999987
No 366
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=304.87 Aligned_cols=271 Identities=25% Similarity=0.347 Sum_probs=202.2
Q ss_pred CccceeecccccEEEEEEE-EeCCCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC------CeeEE
Q 005536 326 FSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE------GEPIL 397 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~------~~~~l 397 (692)
+...+.||+|+||.||+|+ ...|+.||||.++.. .....+...+|+++|++++|+|||++++.-.+. +.+.+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4556789999999999999 456999999999864 345667788999999999999999999986543 46899
Q ss_pred EEEeCCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc--C--CCceEEeeecCC
Q 005536 398 VYEFMPNGTLCQHLQRERG-SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD--Y--NYRSKVADFGLS 472 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~-~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld--~--~~~~kl~DFGla 472 (692)
||||+.+|+|...|.+... ..|++...+.+..+++.||.|||+ ++|+||||||.||++- + .-..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999987543 469999999999999999999998 5999999999999993 2 335799999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCcccccc-CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc-
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQY-FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV- 550 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 550 (692)
|....+ ...+...||..|++||.+.. ..|+...|.|||||++||.+||..||....... +.....+..+.+..-
T Consensus 172 rel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk--~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 172 RELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK--NNKEIMWHIITKKPSG 247 (732)
T ss_pred ccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc--ccchhhhhhhccCCCc
Confidence 964333 35677899999999999885 789999999999999999999999996433221 111111221111110
Q ss_pred ------cccccccCC----cCCCccCHHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHhhhh
Q 005536 551 ------DEIIDPYLE----PHRDAWTLSSIHNVAELAFRCLAFHRDMRP--TMMEVAEELEHIRV 603 (692)
Q Consensus 551 ------~ei~d~~l~----~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP--sm~eVl~~L~~i~~ 603 (692)
.+.-+|... +............+-.....+|..+|++|- ...+...++..|..
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 111111000 001112233445566777778888999997 66666666666543
No 367
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=329.84 Aligned_cols=253 Identities=24% Similarity=0.365 Sum_probs=200.8
Q ss_pred HHhhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeE
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~ 396 (692)
..++-++....+||.|.||.||-+. +.+|...|+|-++..+ ....+...+|+.++..|+|||+|+.+|+-.+.+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 3455677778899999999999998 5568889999987654 334567789999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
|.||||++|+|.+.+... +.+++........|++.|++|||++ +||||||||+|||||.+|.+|++|||.|....
T Consensus 1311 IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEec
Confidence 999999999999999754 4466666677889999999999995 99999999999999999999999999998643
Q ss_pred CCCC---cccccCCCCCCCCCccccccC---CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 477 TESS---HISTAPQGTPGYLDPQYHQYF---HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 477 ~~~~---~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
.... .......||+-|||||++.+. ....+.||||+|||++||+||++||..-.. +++ .+-.+..|..
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn----e~a--IMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN----EWA--IMYHVAAGHK 1459 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc----hhH--HHhHHhccCC
Confidence 3211 112345799999999998654 345689999999999999999999963221 111 2233344433
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
.. .+.....+-.+++.+||+.||++|-++.|++
T Consensus 1460 Pq------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qll 1492 (1509)
T KOG4645|consen 1460 PQ------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLL 1492 (1509)
T ss_pred CC------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHH
Confidence 32 3334555678899999999999997776554
No 368
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=282.75 Aligned_cols=263 Identities=25% Similarity=0.336 Sum_probs=210.0
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEeC------CCEEEEEEeecC-CchhHHHHHHHHHHHHhCCCCCeeeeEEEEE
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHN------DDWVAIKRFRYR-DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCI 390 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~H~niv~l~g~~~ 390 (692)
|+..-..+++..-.+-+|.||.||.|.+.+ .+.|.+|.++.. .+-+...|+.|...+..+.|||+.++.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 444445667777789999999999997654 345778887654 3445678899999999999999999999997
Q ss_pred eC-CeeEEEEEeCCCCCHHHHHhhcc------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc
Q 005536 391 EE-GEPILVYEFMPNGTLCQHLQRER------GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR 463 (692)
Q Consensus 391 ~~-~~~~lV~E~~~~gsL~~~l~~~~------~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~ 463 (692)
++ +.++++|.++.-|+|..+|...+ .+.++..+...+|.|++.|++|||++ +|||.||.++|.+||+..+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhee
Confidence 65 67899999999999999998433 23477788899999999999999995 9999999999999999999
Q ss_pred eEEeeecCCccCCCCCCccc-ccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHH
Q 005536 464 SKVADFGLSRLGMTESSHIS-TAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALA 541 (692)
Q Consensus 464 ~kl~DFGla~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~ 541 (692)
+||+|=.++|.....+.+-. ........||+||.+++..|+.++|||||||+||||+| |+.|+..-+|++ .
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m 507 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------M 507 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------H
Confidence 99999999997554444432 33345679999999999999999999999999999999 666654222211 1
Q ss_pred HHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 542 IDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 542 ~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
...+++| .+-..+.++++++..++.-||+..|++||+++|++.-|.+.-
T Consensus 508 ~~ylkdG------------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 508 EHYLKDG------------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred HHHHhcc------------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2222222 222345578899999999999999999999999999887753
No 369
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=279.31 Aligned_cols=241 Identities=24% Similarity=0.297 Sum_probs=197.9
Q ss_pred hccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV 398 (692)
.++|+..+.||+|.||+|-+.+- ..++.+|+|++++.. .++...-+.|-++|...+||.+..|-..+...+.+++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 36788899999999999999874 458899999998763 44555667899999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||..||.|+-||.+. +.+++......-.+|..||.|||+ ++||.||||.+|+|||.+|.+||+|||+++.....
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999999875 448888888888999999999999 59999999999999999999999999999864332
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
........|||.|+|||++....|....|.|.+||++|||++|+.||.......-. +.+-. .++
T Consensus 322 -g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLF-------eLIl~---ed~----- 385 (516)
T KOG0690|consen 322 -GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLF-------ELILM---EDL----- 385 (516)
T ss_pred -cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHH-------HHHHh---hhc-----
Confidence 33445678999999999999999999999999999999999999999743321111 11110 111
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
..+.....+...|+...|..||.+|.
T Consensus 386 -----kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 386 -----KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -----cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 11222334667889999999999995
No 370
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=272.47 Aligned_cols=268 Identities=23% Similarity=0.325 Sum_probs=211.5
Q ss_pred ChHHHHHhhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeC
Q 005536 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEE 392 (692)
Q Consensus 315 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~ 392 (692)
+++++-+.|+ +.||+|+|+.|--.+ +.++..+|||++.+.......+..+|++++.+.+ |+||++|+++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3566666664 479999999998776 6789999999998887778889999999999996 99999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---ceEEeee
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY---RSKVADF 469 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~---~~kl~DF 469 (692)
...|||||-|.||.|..+|++. ..+++.++-++..+||.||.|||. ++|.||||||+|||-.+.. -+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecc
Confidence 9999999999999999999875 458999999999999999999999 5999999999999996554 4899999
Q ss_pred cCCccCC--C----CCCcccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhCCcccCCCCC-------
Q 005536 470 GLSRLGM--T----ESSHISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITALKVVDFSRP------- 531 (692)
Q Consensus 470 Gla~~~~--~----~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~------- 531 (692)
.|+.-.. . ........+.|...|||||+.. ...|+.+.|.||||||||-|++|.+||.....
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 9874311 1 1122234567999999999742 23578899999999999999999999964322
Q ss_pred -cccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 532 -HSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 532 -~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
..-..-.....+.|++|.. |+.|+ +| .....+..+|+...|..++.+|.++.+++ .++|..
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkY-eFPdk-------dW-ahIS~eakdlisnLlvrda~~rlsa~~vl-------nhPw~~ 365 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKY-EFPDK-------DW-AHISSEAKDLISNLLVRDAKQRLSAAQVL-------NHPWVQ 365 (463)
T ss_pred CCccHHHHHHHHHHHhccCC-cCChh-------hh-HHhhHHHHHHHHHHHhccHHhhhhhhhcc-------CCcccc
Confidence 1112223455666776643 22222 22 23456778899999999999999988887 566654
No 371
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.6e-32 Score=298.03 Aligned_cols=266 Identities=19% Similarity=0.214 Sum_probs=185.0
Q ss_pred hhccCccceeecccccEEEEEEEE-----------------eCCCEEEEEEeecCCchhHHHH--------------HHH
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL-----------------HNDDWVAIKRFRYRDTDSIDQV--------------MNE 370 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~E 370 (692)
..++|+..++||+|+||+||+|.+ .+++.||||+++.......++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2346799999975543333333 346
Q ss_pred HHHHHhCCCCCe-----eeeEEEEEe--------CCeeEEEEEeCCCCCHHHHHhhccC---------------------
Q 005536 371 IKLLSSVSHPNL-----LRLLGCCIE--------EGEPILVYEFMPNGTLCQHLQRERG--------------------- 416 (692)
Q Consensus 371 ~~il~~l~H~ni-----v~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~--------------------- 416 (692)
+.++.+++|.++ ++++++|.. .+..+|||||+++++|.++|+...+
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 677887753 3568999999999999999975321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCCCc
Q 005536 417 -SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDP 495 (692)
Q Consensus 417 -~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aP 495 (692)
..++|..+..|+.|++.+|+|||+ .+|+||||||+|||++.++.+||+|||+++..............+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 125678899999999999999999 4999999999999999999999999999975332222122223458999999
Q ss_pred cccccCC----------------------CCCccceeehhHHHHHHHhCCc-ccCCCCCccc-c---cHHHHHHHHhccC
Q 005536 496 QYHQYFH----------------------LSDKSDVYSFGVVLIEIITALK-VVDFSRPHSE-V---NLAALAIDRIGRG 548 (692)
Q Consensus 496 E~~~~~~----------------------~s~ksDV~SfGvll~eLltg~~-p~~~~~~~~~-~---~~~~~~~~~~~~~ 548 (692)
|.+.... ...+.||||+||++|||+++.. |+........ . ......+..+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875332 1235799999999999999875 5532111110 0 0000111111111
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHHHHhhhhccccc
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHR---DMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p---~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.. +. ..+ ........+|+.++|..+| .+|+|++|++ .|+|..
T Consensus 460 ~~----~~------~~~-d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL-------~Hp~f~ 504 (507)
T PLN03224 460 KY----DF------SLL-DRNKEAGWDLACKLITKRDQANRGRLSVGQAL-------SHRFFL 504 (507)
T ss_pred CC----Cc------ccc-cccChHHHHHHHHHhccCCCCcccCCCHHHHh-------CCCCcC
Confidence 11 10 000 1123567899999999765 6899999988 677764
No 372
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-33 Score=312.61 Aligned_cols=273 Identities=23% Similarity=0.258 Sum_probs=216.9
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE 391 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~ 391 (692)
..++..-.+.|.+.+.||+|+||.|...+... ++.||+|++++- ......-|..|-.+|..-+.+-|+.|...|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 35556667889999999999999999998654 788999999763 23455678999999999999999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
+.++|+|||||+||+|-.+|.+.. .+++..+...+.+|..||.-||+. |+|||||||.|||||..|++||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999998764 699999999999999999999996 999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 546 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~ 546 (692)
+-....+..-.+...+|||.|++||+++. +.|+...|.||+||++|||+.|..||.... +... ..+|.
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveT-Y~KIm 294 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVET-YGKIM 294 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHH-HHHHh
Confidence 87655566666778899999999998752 568899999999999999999999996321 2221 22222
Q ss_pred cCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccccccCC
Q 005536 547 RGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGS 614 (692)
Q Consensus 547 ~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~~~~s 614 (692)
.- .+. +. ++ ...+.+.+..+||.+.+. +|+.|..-.. +++|+.++|+.++.|.+
T Consensus 295 ~h--k~~----l~--FP-~~~~VSeeakdLI~~ll~-~~e~RLgrng----iedik~HpFF~g~~W~~ 348 (1317)
T KOG0612|consen 295 NH--KES----LS--FP-DETDVSEEAKDLIEALLC-DREVRLGRNG----IEDIKNHPFFEGIDWDN 348 (1317)
T ss_pred ch--hhh----cC--CC-cccccCHHHHHHHHHHhc-Chhhhccccc----HHHHHhCccccCCChhh
Confidence 11 000 10 00 012345677889988886 6777765222 46778999998887644
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=3.2e-32 Score=277.13 Aligned_cols=232 Identities=19% Similarity=0.197 Sum_probs=183.5
Q ss_pred cccEEEEEEEEe-CCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhh
Q 005536 335 GAYGTVYAGKLH-NDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQR 413 (692)
Q Consensus 335 G~fG~Vy~g~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~ 413 (692)
|.+|.||+++.. +++.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999854 57899999997542 234555666667799999999999999999999999999999999976
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCC
Q 005536 414 ERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYL 493 (692)
Q Consensus 414 ~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~ 493 (692)
. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.++++|||.+..... ......++..|+
T Consensus 79 ~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~y~ 149 (237)
T cd05576 79 F--LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED----SCDGEAVENMYC 149 (237)
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccc----ccccCCcCcccc
Confidence 4 348999999999999999999999 5999999999999999999999999998764322 122335677899
Q ss_pred CccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHH
Q 005536 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNV 573 (692)
Q Consensus 494 aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l 573 (692)
|||.+.+..++.++||||+|+++|||++|+.|+...... +.. .....+ +......+
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~~~-----~~~~~~-------~~~~~~~~ 205 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------INT-----HTTLNI-------PEWVSEEA 205 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------ccc-----ccccCC-------cccCCHHH
Confidence 999998888999999999999999999998876422110 000 000000 11123567
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhhhccc
Q 005536 574 AELAFRCLAFHRDMRPTMMEVAEELEHIRVSSW 606 (692)
Q Consensus 574 ~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~ 606 (692)
.+++.+||+.||++||++.+. .++++..++|
T Consensus 206 ~~li~~~l~~dp~~R~~~~~~--~~~~~~~h~~ 236 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAGVA--GVEDIKSHPF 236 (237)
T ss_pred HHHHHHHccCCHHHhcCCCcc--chHHHHcCCC
Confidence 899999999999999998655 3566667776
No 374
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=2.9e-31 Score=308.28 Aligned_cols=145 Identities=28% Similarity=0.415 Sum_probs=131.1
Q ss_pred ccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
++|...++||+|+||+||+|... +++.||||+++... ....+++.+|+.++..++|+||+++++++...+..+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999876 57899999997542 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
||+++++|.+++... ..+++..++.|+.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999764 358899999999999999999999 499999999999999999999999999986
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=286.48 Aligned_cols=243 Identities=25% Similarity=0.358 Sum_probs=196.4
Q ss_pred ceeecccccEEEEEEEE-eCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 329 KHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
.+.||+|.||+||-|+. ++|+.||||.+.+. ......++.+|+.||.+++||.||.|..-|+..+..++|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 46899999999999985 56999999998654 2445588999999999999999999999999999999999999 56
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CceEEeeecCCccCCCCCCcc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN---YRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~---~~~kl~DFGla~~~~~~~~~~ 482 (692)
+..+.+.......|++..-..++.||+.||.|||. ++|+|.||||+||||... -.+||+|||+||++.... .
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--F 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--F 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh--h
Confidence 66666655555679999999999999999999999 599999999999999543 479999999999854433 3
Q ss_pred cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 483 STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
...++||+.|+|||++++..|...-|+||.||++|--++|..||..... + .++++. .......
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd---I------ndQIQN--------AaFMyPp 785 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED---I------NDQIQN--------AAFMYPP 785 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc---h------hHHhhc--------cccccCC
Confidence 3567899999999999999999999999999999999999999963322 1 122222 1111122
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..|. +...+..+||...|+..-++|-+..+-+
T Consensus 786 ~PW~-eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 786 NPWS-EISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred Cchh-hcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 3332 4456778999999999999999866543
No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-32 Score=280.68 Aligned_cols=255 Identities=24% Similarity=0.388 Sum_probs=197.0
Q ss_pred HhhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCC--ch-----hHHHHHHHHHHHHhCCCCCeeeeEEEEE-e
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRD--TD-----SIDQVMNEIKLLSSVSHPNLLRLLGCCI-E 391 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~--~~-----~~~~~~~E~~il~~l~H~niv~l~g~~~-~ 391 (692)
...++|-..++||+|||+.|||+. +...+.||||+-.... .+ -.+...+|..|-+.|.||.||++++++. +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 345677788899999999999998 5567889999875431 11 1234678999999999999999999986 5
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---CCceEEee
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY---NYRSKVAD 468 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~---~~~~kl~D 468 (692)
.+.++-|+||++|.+|.-||... +.+++.++..|+.||+.||.||.+. +++|||-||||.||||.+ -|.+||.|
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 67889999999999999999875 4589999999999999999999985 689999999999999954 47899999
Q ss_pred ecCCccCCCCCCc------ccccCCCCCCCCCccccccC----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHH
Q 005536 469 FGLSRLGMTESSH------ISTAPQGTPGYLDPQYHQYF----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538 (692)
Q Consensus 469 FGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~ 538 (692)
|||++....+... ......||.+|++||.+.-+ +.+.|.||||.|||+|..+.|++||.......++
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI--- 693 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI--- 693 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH---
Confidence 9999985443322 23345799999999976433 5788999999999999999999999754332221
Q ss_pred HHHHHHhccCcc---cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 539 ALAIDRIGRGCV---DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 539 ~~~~~~~~~~~~---~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+.++.+ .|+--| .. .....+...+|++||++..++|.+..+++
T Consensus 694 ------LqeNTIlkAtEVqFP----~K----PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 ------LQENTILKATEVQFP----PK----PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ------HhhhchhcceeccCC----CC----CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 111111 111101 01 11234567899999999999999877665
No 377
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=273.17 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=196.5
Q ss_pred ceeecccccEEEEEEEE-eCCCEEEEEEeecCCc-hhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 329 KHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
...||.|+||+|+|-.. +.|+..|||+++..+. .+.++++.|.+...+- +.||||+++|.+..++..++-||+| ..
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 55799999999999875 4589999999987644 6678899998876655 6999999999999999999999999 56
Q ss_pred CHHHH---HhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcc
Q 005536 406 TLCQH---LQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHI 482 (692)
Q Consensus 406 sL~~~---l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~ 482 (692)
+|..+ +.......+++...-.|+.-+..||.||.+. -.||||||||+|||||..|.+||+|||++-.. ..+..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL--v~SiA 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQL--VDSIA 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhH--HHHHH
Confidence 66443 3333445699999999999999999999986 68999999999999999999999999998642 22334
Q ss_pred cccCCCCCCCCCccccccC--CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCc
Q 005536 483 STAPQGTPGYLDPQYHQYF--HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEP 560 (692)
Q Consensus 483 ~~~~~gt~~Y~aPE~~~~~--~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~ 560 (692)
.+.-.|...|||||.+... .|+-+|||||||++|||+.||+.|+..... ....+..+..|....+..+
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s------vfeql~~Vv~gdpp~l~~~---- 293 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS------VFEQLCQVVIGDPPILLFD---- 293 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH------HHHHHHHHHcCCCCeecCc----
Confidence 4566799999999988543 488899999999999999999999864322 1122333444444333222
Q ss_pred CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 561 HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 561 ~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.........+..++.-||..|...||...++.+
T Consensus 294 ---~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 ---KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ---ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111234567889999999999999999988864
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=267.78 Aligned_cols=260 Identities=22% Similarity=0.309 Sum_probs=205.0
Q ss_pred hhccCccc-eeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeC----Ce
Q 005536 322 ATSFFSEK-HRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEE----GE 394 (692)
Q Consensus 322 ~~~~f~~~-~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~----~~ 394 (692)
+++.|.+. ++||-|-.|.|-.... ..++.+|+|++... ....+|+++-=.. .|||||.+++++... ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45555543 5799999999988764 45788999998643 4456788876555 499999999998643 46
Q ss_pred eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC---CCceEEeeecC
Q 005536 395 PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY---NYRSKVADFGL 471 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~---~~~~kl~DFGl 471 (692)
+++|||.|+||.|+..++......+++.++-.|..||+.|+.|||+. +|.||||||+|+|... |-.+||+|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 78999999999999999998877899999999999999999999996 9999999999999964 55799999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
|+.. ........+.-|+.|.|||++...+|+...|+||+||++|-|++|.+||..... ....--...+|+.|..
T Consensus 211 AK~t--~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg---~aispgMk~rI~~gqy- 284 (400)
T KOG0604|consen 211 AKET--QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGMKRRIRTGQY- 284 (400)
T ss_pred cccc--CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---ccCChhHHhHhhccCc-
Confidence 9862 223344667889999999999999999999999999999999999999974322 1222233444544422
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
++ ...+|+ ...+...++++.+|+.+|.+|.|+.|++ .++|..+.
T Consensus 285 ~F-------P~pEWs-~VSe~aKdlIR~LLkt~PteRlTI~~~m-------~hpwi~~~ 328 (400)
T KOG0604|consen 285 EF-------PEPEWS-CVSEAAKDLIRKLLKTEPTERLTIEEVM-------DHPWINQY 328 (400)
T ss_pred cC-------CChhHh-HHHHHHHHHHHHHhcCCchhheeHHHhh-------cCchhccc
Confidence 11 112332 4567788999999999999999977765 78887544
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.7e-31 Score=265.75 Aligned_cols=238 Identities=28% Similarity=0.371 Sum_probs=194.4
Q ss_pred ccEEEEEEEEeC-CCEEEEEEeecCCchh-HHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhh
Q 005536 336 AYGTVYAGKLHN-DDWVAIKRFRYRDTDS-IDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQR 413 (692)
Q Consensus 336 ~fG~Vy~g~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~ 413 (692)
+||.||+++..+ ++.+++|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999764 8899999998665444 78999999999999999999999999999999999999999999999876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCC
Q 005536 414 ERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYL 493 (692)
Q Consensus 414 ~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~ 493 (692)
... +++..++.++.+++.+|+|||+. +|+|+||+|+||++++++.++|+|||.+....... ......++..|+
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYM 153 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCC
Confidence 533 89999999999999999999994 99999999999999999999999999998643321 234456889999
Q ss_pred CccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHH
Q 005536 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNV 573 (692)
Q Consensus 494 aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l 573 (692)
+||.+....++.++||||||++++||++|..|++.... .....+.+.++........ .....++
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 217 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ------LLELFKKIGKPKPPFPPPE----------WKISPEA 217 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------HHHHHHHHhccCCCCcccc----------ccCCHHH
Confidence 99999888899999999999999999999998864211 1122233332221110000 0033578
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 005536 574 AELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 574 ~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+++.+||..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 89999999999999999999985
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3.3e-31 Score=300.77 Aligned_cols=265 Identities=22% Similarity=0.232 Sum_probs=172.2
Q ss_pred hhccCccceeecccccEEEEEEEEeC-----CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEE------EE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN-----DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGC------CI 390 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~------~~ 390 (692)
..++|+..++||+|+||+||+|++.+ +..||||++..... .+.+.+| .+....+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 46789999999999999999999754 57899999864321 1222222 1222223333222221 24
Q ss_pred eCCeeEEEEEeCCCCCHHHHHhhccCC------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 005536 391 EEGEPILVYEFMPNGTLCQHLQRERGS------------------GLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIK 452 (692)
Q Consensus 391 ~~~~~~lV~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik 452 (692)
+....+|||||+++++|.++++..... ......+..|+.|++.||+|||+ ++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence 556899999999999999998754210 01233456799999999999999 599999999
Q ss_pred CCceEEcC-CCceEEeeecCCccCCCCCCcccccCCCCCCCCCccccccC----------------------CCCCccce
Q 005536 453 SSNILLDY-NYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF----------------------HLSDKSDV 509 (692)
Q Consensus 453 ~~NILld~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~s~ksDV 509 (692)
|+|||+++ ++.+||+|||+|+..............+|+.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57999999999986433333344556789999999965322 24456799
Q ss_pred eehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc-----cccccccCCcC----CCccCHHHHHHHHHHHHHh
Q 005536 510 YSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV-----DEIIDPYLEPH----RDAWTLSSIHNVAELAFRC 580 (692)
Q Consensus 510 ~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ei~d~~l~~~----~~~~~~~~~~~l~~L~~~C 580 (692)
|||||+||||+++..+.+.. + ..+...+..... ...+.+..... .+.. ........+|+.+|
T Consensus 363 wSlGviL~el~~~~~~~~~~-------~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~dLi~~m 433 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSN-------L-IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVL-DLDGGAGWELLKSM 433 (566)
T ss_pred HHHHHHHHHHHhCcCCCchH-------H-HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhc-cccchHHHHHHHHH
Confidence 99999999999976543311 0 011111111000 00111100000 0000 00112456899999
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 581 LAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 581 l~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
|+.||++|||++|++ .++|...
T Consensus 434 L~~dP~kR~ta~e~L-------~Hpff~~ 455 (566)
T PLN03225 434 MRFKGRQRISAKAAL-------AHPYFDR 455 (566)
T ss_pred ccCCcccCCCHHHHh-------CCcCcCC
Confidence 999999999999887 5777653
No 381
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=4.3e-32 Score=267.92 Aligned_cols=202 Identities=26% Similarity=0.385 Sum_probs=167.2
Q ss_pred ccCccceeecccccEEEEEEEEeC-----CCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEe-CCee
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-----DDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIE-EGEP 395 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~-~~~~ 395 (692)
..|+....||+|.||.|||+.-.+ ...+|||+++.... .-.....+|+.+++.++||||+.|..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 457888899999999999996433 23689999986522 223457799999999999999999999988 6789
Q ss_pred EEEEEeCCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC----CceEEee
Q 005536 396 ILVYEFMPNGTLCQHLQRER---GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN----YRSKVAD 468 (692)
Q Consensus 396 ~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~----~~~kl~D 468 (692)
+|++||.+. +|.+.++-.+ ...++......|+.||+.|+.|||+ +=|+||||||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence 999999965 8888887543 2459999999999999999999999 489999999999999777 8999999
Q ss_pred ecCCccCCCCCC--cccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCC
Q 005536 469 FGLSRLGMTESS--HISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFS 529 (692)
Q Consensus 469 FGla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~ 529 (692)
||++|++...-. .....++-|..|.|||.+.+. +||.+.|||+.|||+.||+|.++.|...
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999998543221 223455679999999987765 7999999999999999999998887643
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=287.75 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=198.3
Q ss_pred hhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~ 399 (692)
.+..|.....+|.|+|+.|-+... .+++..+||++... ..+-.+|+.++... +||||+++.+.+.+..+.++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 356777788899999999988874 45788999999755 23344677777666 6999999999999999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE-cCCCceEEeeecCCccCCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILL-DYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILl-d~~~~~kl~DFGla~~~~~~ 478 (692)
|.+.++-|.+.+.... .....+..|+.+++.|+.|||+ ++++||||||+|||+ ++.++++|+|||.++....+
T Consensus 396 e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999998888776643 2236777899999999999999 499999999999999 58899999999999864333
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
.....-|..|.|||+.....|++++|+||||++||||++|+.|+...... .....+++.+...
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~s------- 532 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKFS------- 532 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCccc-------
Confidence 33446688999999999999999999999999999999999999754332 2334555544332
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccc
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWA 607 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~ 607 (692)
....+...+|+.+||+.||.+||+|.++. .++|.
T Consensus 533 --------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~-------~h~w~ 566 (612)
T KOG0603|consen 533 --------ECVSDEAKDLLQQLLQVDPALRLGADEIG-------AHPWF 566 (612)
T ss_pred --------cccCHHHHHHHHHhccCChhhCcChhhhc-------cCcch
Confidence 23445778999999999999999987765 78887
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-32 Score=275.87 Aligned_cols=240 Identities=26% Similarity=0.390 Sum_probs=196.6
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV 398 (692)
..|.....||+|+||.|.++..+. .+.+|||++++. ..++.+--+.|-++|... +-|.++++..++...+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 457788899999999999997544 567999999865 234455566788888776 578999999999999999999
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
|||+.+|+|--+++.. ..+.+..+...|.+||-||-+||+ ++||.||||..|||||.+|.+||+|||+++....+
T Consensus 429 MEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccC
Confidence 9999999999999875 347777888999999999999999 59999999999999999999999999999863332
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 558 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l 558 (692)
. .......|||.|+|||.+...+|+...|.|||||+||||+.|++||+.....+ + .+.|.+
T Consensus 504 ~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---l----F~aI~e----------- 564 (683)
T KOG0696|consen 504 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---L----FQAIME----------- 564 (683)
T ss_pred C-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---H----HHHHHH-----------
Confidence 2 23355689999999999999999999999999999999999999998543221 1 122211
Q ss_pred CcCCCccCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 559 EPHRDAWTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 559 ~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
+.-.++.....+..++....|..+|.+|.
T Consensus 565 --hnvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 565 --HNVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred --ccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 11223445667888999999999999995
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=287.58 Aligned_cols=262 Identities=24% Similarity=0.352 Sum_probs=212.1
Q ss_pred CCChHHHHHhhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEE
Q 005536 313 FYPYKEIEKATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCI 390 (692)
Q Consensus 313 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~ 390 (692)
...++.+...++-|++.+.||.|.+|.||+++ .++++.+|||++... .+..++...|..+|+.+ .|||++.++|++.
T Consensus 8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 34555666677889999999999999999998 567888999988754 44556777899999988 5999999999986
Q ss_pred e-----CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceE
Q 005536 391 E-----EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSK 465 (692)
Q Consensus 391 ~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~k 465 (692)
- +++++||||||.+|+..|+++...+..+.|..+.-|+.+++.||.+||. ..++|||||-.||||+.++.+|
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEE
Confidence 3 5789999999999999999998878889999999999999999999999 4899999999999999999999
Q ss_pred EeeecCCccCCCCCCcccccCCCCCCCCCccccccC-----CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHH
Q 005536 466 VADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYF-----HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAAL 540 (692)
Q Consensus 466 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~ 540 (692)
|.|||++.... ..........||+.|||||++... .|+.++|+||||++..||--|.+|+-...| ..
T Consensus 164 LvDFGvSaQld-sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-------mr 235 (953)
T KOG0587|consen 164 LVDFGVSAQLD-STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-------MR 235 (953)
T ss_pred Eeeeeeeeeee-cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-------hh
Confidence 99999997633 233344556899999999997543 477789999999999999999998753332 11
Q ss_pred HHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 541 AIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 541 ~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
++=.+.++....+ ..+....+++.++|..||..|.++||++.++++
T Consensus 236 aLF~IpRNPPPkL----------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 ALFLIPRNPPPKL----------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhccCCCCCCccc----------cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1222222222111 123455678999999999999999999998874
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=270.20 Aligned_cols=267 Identities=21% Similarity=0.285 Sum_probs=201.3
Q ss_pred HHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCC-C-C----CeeeeEEEEEeC
Q 005536 320 EKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-H-P----NLLRLLGCCIEE 392 (692)
Q Consensus 320 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H-~----niv~l~g~~~~~ 392 (692)
...+++|.+...+|+|.||.|-....+. +..||||+++.. ..-.+..+-|+++|.++. + | -+|++.+|+.-.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 3447889999999999999999886543 688999999754 334456678999999994 3 2 378889999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC------------
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY------------ 460 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~------------ 460 (692)
++.+||+|.+ |-+++++|..+...+++...+..|+.|++++++|||+. +++|-||||+|||+..
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCc
Confidence 9999999999 67999999998778899999999999999999999995 9999999999999932
Q ss_pred --------CCceEEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCc
Q 005536 461 --------NYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPH 532 (692)
Q Consensus 461 --------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~ 532 (692)
+..+||+|||.|+...... ...+.|..|.|||++.+-.++.++||||+||||+||.||...|......
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 3468999999998632222 5567899999999999999999999999999999999999988755422
Q ss_pred ccccHHHHHH--------HHh------ccCccc--c---------cccccCC-cCCCccCHHHHHHHHHHHHHhcccCCC
Q 005536 533 SEVNLAALAI--------DRI------GRGCVD--E---------IIDPYLE-PHRDAWTLSSIHNVAELAFRCLAFHRD 586 (692)
Q Consensus 533 ~~~~~~~~~~--------~~~------~~~~~~--e---------i~d~~l~-~~~~~~~~~~~~~l~~L~~~Cl~~~p~ 586 (692)
+.....+.+. .+. .+|+++ + +.++-.. .........+..++.+|+.+||.+||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 2111111111 000 011111 0 0000000 000001123455799999999999999
Q ss_pred CCCCHHHHH
Q 005536 587 MRPTMMEVA 595 (692)
Q Consensus 587 ~RPsm~eVl 595 (692)
+|+|+.|++
T Consensus 396 ~RiTl~EAL 404 (415)
T KOG0671|consen 396 RRITLREAL 404 (415)
T ss_pred ccccHHHHh
Confidence 999999887
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-30 Score=236.54 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=194.8
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCch--hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+|+..++||+|.||+||||+..+ ++.||+|+++..+.+ --....+|+-+|+.++|+|||++++....+..+-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667789999999999999554 788999999866432 235678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSH 481 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~ 481 (692)
+ ..+|..+..... ..++......++.|+++||.+.|++ .+.|||+||+|.|++.+|+.|++|||+++.+... ..
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip-vr 156 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VR 156 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc-eE
Confidence 9 568888877654 4589999999999999999999995 8999999999999999999999999999864322 22
Q ss_pred ccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHHHhccCcc---cccccc
Q 005536 482 ISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAIDRIGRGCV---DEIIDP 556 (692)
Q Consensus 482 ~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ei~d~ 556 (692)
.....+-|..|.+|.++.+. -|+...|+||-|+++.||.. |++.|......++.....+......+... ..+.|-
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 33445679999999988766 57888999999999999997 44445433322222222222222222211 122222
Q ss_pred cCCcCCC---ccC---HHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 557 YLEPHRD---AWT---LSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 557 ~l~~~~~---~~~---~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
...+.+. .|+ ......=.+|..+.|.-+|.+|.++++.+
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal 281 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL 281 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence 2211111 111 11112345788888888999999988776
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-31 Score=276.45 Aligned_cols=258 Identities=20% Similarity=0.258 Sum_probs=209.2
Q ss_pred ceeecccccEEEEEEEEeCCC-EEEEEEeecC---CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 329 KHRLGTGAYGTVYAGKLHNDD-WVAIKRFRYR---DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
...||-||||.|=+.+..... .+|+|.+++. +..+.+....|-.||-..+.|.||+++-.+.+....|+.||-|-|
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG 504 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG 504 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence 457999999999998876544 3788877654 566777888999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|.|+..|.+. ..++......++..+.+|++|||+ ++||.|||||+|.|||.+|.+||.|||+|+... .....-
T Consensus 505 GElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~--~g~KTw 577 (732)
T KOG0614|consen 505 GELWTILRDR--GSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG--SGRKTW 577 (732)
T ss_pred chhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhc--cCCcee
Confidence 9999999875 458888888999999999999999 499999999999999999999999999998643 333445
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...|||.|.|||.+.+...+..+|.||||+++|||++|.+||....+-.. .+.+-+|- | .-+
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt-------Yn~ILkGi-----d------~i~ 639 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT-------YNLILKGI-----D------KIE 639 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH-------HHHHHhhh-----h------hhh
Confidence 66899999999999999999999999999999999999999986554322 22232221 0 012
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccccccC
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMG 613 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~~~~ 613 (692)
++........+|+++..+.+|.+|.-. .-.-+.+|+++.|+.+..+.
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~--~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGY--QKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhcc--ccCChHHHHhhhhhhcCChh
Confidence 233344567889999999999999752 12234678899999876543
No 388
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-30 Score=254.18 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=208.5
Q ss_pred hccCccceeecccccEEEEEEEEe-CCCEEEEEEeecC---CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYR---DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~l 397 (692)
.+.|+..+.||+|+|.+|..+++. ..+.+|+|++++. +.++++..+.|-.+..+. +||.+|-|..|+..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467888999999999999999865 4678999999864 456778888999998877 69999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
|.||+++|+|.-++++. +.|+++.+.....+|..||.|||+ ++||.||||..|+|||..+.+||.|+|+.+....
T Consensus 329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999999888875 459999999999999999999999 5999999999999999999999999999987443
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcc-cccHHHHHHHHhccCcccccccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHS-EVNLAALAIDRIGRGCVDEIIDP 556 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ei~d~ 556 (692)
. ........|||.|+|||.+.+..|....|.|++||+++||+.|+.||+.-.... +.+...+..+.+-+.
T Consensus 404 ~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek-------- 474 (593)
T KOG0695|consen 404 P-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK-------- 474 (593)
T ss_pred C-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--------
Confidence 3 344456789999999999999999999999999999999999999998543221 222223333333221
Q ss_pred cCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccc
Q 005536 557 YLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWAS 608 (692)
Q Consensus 557 ~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~ 608 (692)
.+. .+....-+...+++.-|+.||.+|..-.--. -+..|+.++...
T Consensus 475 qir-----iprslsvkas~vlkgflnkdp~erlgc~~~~-g~~dik~h~ffr 520 (593)
T KOG0695|consen 475 QIR-----IPRSLSVKASHVLKGFLNKDPKERLGCRPQT-GFSDIKSHAFFR 520 (593)
T ss_pred ccc-----ccceeehhhHHHHHHhhcCCcHHhcCCCccc-chhhhhcchhhh
Confidence 111 0111223456788899999999985321100 344555554443
No 389
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=7.1e-30 Score=239.29 Aligned_cols=202 Identities=27% Similarity=0.438 Sum_probs=167.5
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecC-CchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEE
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR-DTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E 400 (692)
+.......||+|++|.|-+-++ .+|+..|+|+++.. +.+..++.++|+.+..+- ..|.+|.++|........++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 3444466799999999988774 56899999999865 455667888999987665 69999999999999999999999
Q ss_pred eCCCCCHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 401 FMPNGTLCQHLQR--ERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 401 ~~~~gsL~~~l~~--~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
.| .-+|..+-.+ .++..+++...-+||..+.+||.|||+. -.+||||+||+|||++.+|++|++|||++-...
T Consensus 126 ~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~-- 200 (282)
T KOG0984|consen 126 LM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLV-- 200 (282)
T ss_pred Hh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeeh--
Confidence 99 5677665543 2356799999999999999999999997 589999999999999999999999999986532
Q ss_pred CCcccccCCCCCCCCCcccccc----CCCCCccceeehhHHHHHHHhCCcccCCCC
Q 005536 479 SSHISTAPQGTPGYLDPQYHQY----FHLSDKSDVYSFGVVLIEIITALKVVDFSR 530 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~----~~~s~ksDV~SfGvll~eLltg~~p~~~~~ 530 (692)
++-..+...|...|||||.+.. ..|+-||||||||+.+.||.+++.|++...
T Consensus 201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 2222344578899999998643 368899999999999999999999997543
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.7e-31 Score=254.39 Aligned_cols=266 Identities=20% Similarity=0.273 Sum_probs=193.2
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc--hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC--------C
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE--------G 393 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~g~~~~~--------~ 393 (692)
.|....+||+|.||.||+++..+ ++.||+|+.-..++ .--...++|+++|..|+|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34556789999999999998554 67789887654322 2234567999999999999999999988532 2
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR 473 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~ 473 (692)
..+||+.+++. +|.-.|... ...++..++.+++.++..||.|+|.. .|+|||+|++|+||+.++.+||+|||+++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence 48999999964 787777543 34589999999999999999999995 99999999999999999999999999997
Q ss_pred cCCCCC---CcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc
Q 005536 474 LGMTES---SHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC 549 (692)
Q Consensus 474 ~~~~~~---~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 549 (692)
.+.... ....+..+-|..|.+||.+.+. .|+++.|||.-||++.||.|+.+.+..........+.......+....
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 643221 1223455679999999987654 799999999999999999999887765544333333333222222221
Q ss_pred ccccccccCCcCC--C-------ccCHHHH------HHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 VDEIIDPYLEPHR--D-------AWTLSSI------HNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 ~~ei~d~~l~~~~--~-------~~~~~~~------~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..++..-.+.... + ..-.+.. ++.++|+.+++..||.+|+++.+++
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 1111110000000 0 0001111 2678999999999999999999987
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.6e-29 Score=266.33 Aligned_cols=207 Identities=26% Similarity=0.382 Sum_probs=175.6
Q ss_pred hhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
-...|...+.||-|+||.|.++...| ...+|.|.+++.+ .........|-+||...+.+-||+|+..|.+.+.+|+
T Consensus 627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence 34678889999999999999987444 5679999998764 3455667889999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC-
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM- 476 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~- 476 (692)
||||++||++-.+|.+. ..+.+..+...+.++..|+++.|.. |+|||||||.|||||.+|.+||.||||+.=+.
T Consensus 707 VMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred EEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 99999999999999875 4478888888889999999999996 99999999999999999999999999973100
Q ss_pred -------CCCCc---------------------------------ccccCCCCCCCCCccccccCCCCCccceeehhHHH
Q 005536 477 -------TESSH---------------------------------ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVL 516 (692)
Q Consensus 477 -------~~~~~---------------------------------~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll 516 (692)
....| .....+||+.|+|||++....++.-.|.||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 00000 00123599999999999999999999999999999
Q ss_pred HHHHhCCcccCCCCCcc
Q 005536 517 IEIITALKVVDFSRPHS 533 (692)
Q Consensus 517 ~eLltg~~p~~~~~~~~ 533 (692)
|||+.|+.||....+.+
T Consensus 862 ~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHhhCCCCccCCCCCc
Confidence 99999999998766644
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-30 Score=281.85 Aligned_cols=245 Identities=28% Similarity=0.376 Sum_probs=185.8
Q ss_pred ccCccceeecccccEE-EEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 324 SFFSEKHRLGTGAYGT-VYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~-Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.-|...+.+|.|.-|+ ||+|.. +++.||||++-. +-.+-..+|+..|..- +|||||++++.-.+.+..||..|.
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 3466667899999986 799987 678999999863 3334567899999887 599999999988888999999999
Q ss_pred CCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-----CCceEEeeecCCcc
Q 005536 402 MPNGTLCQHLQRE--RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-----NYRSKVADFGLSRL 474 (692)
Q Consensus 402 ~~~gsL~~~l~~~--~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-----~~~~kl~DFGla~~ 474 (692)
| ..+|.+++... ......-...+.+..|+++||++||+. +||||||||.||||+- ..+++|+|||+++.
T Consensus 585 C-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 C-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred h-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9 67999999874 111122134567889999999999996 9999999999999975 35899999999987
Q ss_pred CCCCCCcc--cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhC-CcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 475 GMTESSHI--STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITA-LKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 475 ~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
...+.... .....||.||+|||.+....-+.+.||||+|+|+|..++| ..||...-.. +. .|..+...
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-~~--------NIl~~~~~ 731 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-QA--------NILTGNYT 731 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-hh--------hhhcCccc
Confidence 54433322 3456799999999999998888899999999999999986 7888632110 00 01111110
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
++ .+.+. .++ +..+||.+|+.++|..||++.+|+
T Consensus 732 --L~-~L~~~-----~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 732 --LV-HLEPL-----PDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred --ee-eeccC-----chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 00 01110 011 678999999999999999999997
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=3.7e-28 Score=239.26 Aligned_cols=210 Identities=35% Similarity=0.569 Sum_probs=183.5
Q ss_pred ecccccEEEEEEEEeC-CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHH
Q 005536 332 LGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQ 409 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~ 409 (692)
||+|.+|.||+++..+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999765 889999999865432 45789999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCCccCCCCCCcccccCCC
Q 005536 410 HLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRLGMTESSHISTAPQG 488 (692)
Q Consensus 410 ~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~~~~~~~~~~~~~~g 488 (692)
++.... ..+++..++.++.+++++|+|||+. +++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG 155 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence 987642 4589999999999999999999994 9999999999999999 89999999999976332211 2334568
Q ss_pred CCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCH
Q 005536 489 TPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTL 567 (692)
Q Consensus 489 t~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~ 567 (692)
...|++||.+... ..+.++|+|++|+++++|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999998877 888999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 568 SSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 568 ~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 356789999999999999999999864
No 394
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=2.1e-27 Score=237.93 Aligned_cols=199 Identities=30% Similarity=0.494 Sum_probs=173.5
Q ss_pred CccceeecccccEEEEEEEEeC-CCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCC
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~ 403 (692)
|...+.||+|++|+||+++..+ ++.+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999876 789999999866544 67889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCccc
Q 005536 404 NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIS 483 (692)
Q Consensus 404 ~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 483 (692)
+++|.+++..... .+++..+..++.+++.+|.|||+. +++|+||+++||+++.++.++|+|||.+...........
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 9999999986532 289999999999999999999994 999999999999999999999999999986443321122
Q ss_pred ccCCCCCCCCCcccc-ccCCCCCccceeehhHHHHHHHhCCcccCC
Q 005536 484 TAPQGTPGYLDPQYH-QYFHLSDKSDVYSFGVVLIEIITALKVVDF 528 (692)
Q Consensus 484 ~~~~gt~~Y~aPE~~-~~~~~s~ksDV~SfGvll~eLltg~~p~~~ 528 (692)
....++..|++||.+ ....++.++|||+||++++||++|+.||+.
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 344678899999998 667788899999999999999999999963
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-29 Score=245.40 Aligned_cols=266 Identities=24% Similarity=0.342 Sum_probs=198.1
Q ss_pred ccceeecccccEEEEEEEE-eCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-----CeeEEE
Q 005536 327 SEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE-----GEPILV 398 (692)
Q Consensus 327 ~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~-----~~~~lV 398 (692)
+..+.||-|+||.||..+. ++|+.||.|++... +-...+.+.+|+++|..++|.|++..++..... .+.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3467899999999998875 46899999998643 234567889999999999999999999876543 357788
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE 478 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~ 478 (692)
+|.| ..+|...+.. ...|+-+...-+..||++||+|||+. +|.||||||.|.|++.|-.+||+|||++|.-..+
T Consensus 136 TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 8888 4577666654 35688888889999999999999995 9999999999999999999999999999975445
Q ss_pred CCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHH-----HHhc---cCc
Q 005536 479 SSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI-----DRIG---RGC 549 (692)
Q Consensus 479 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~-----~~~~---~~~ 549 (692)
....++..+-|..|.|||.+++. +|+.+.||||.|+++.||+.++..|....|..+..+....+ +.++ +|.
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 55555666678999999998765 79999999999999999999999988777766554442221 1111 221
Q ss_pred ccccccccCC-cCCC-----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005536 550 VDEIIDPYLE-PHRD-----AWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 598 (692)
Q Consensus 550 ~~ei~d~~l~-~~~~-----~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L 598 (692)
...++....+ +... .-+...-.+...+..+++.++|++|.+..+.+.-+
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1112111111 0000 00012224556788899999999999988776543
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.4e-27 Score=245.99 Aligned_cols=272 Identities=22% Similarity=0.337 Sum_probs=200.8
Q ss_pred ccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-----C---CCeeeeEEEEEeC--
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-----H---PNLLRLLGCCIEE-- 392 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----H---~niv~l~g~~~~~-- 392 (692)
.+|.+.++||-|.|+|||++.. .+.+.||+|+.+.. ..-.+..+.||++|++++ | .+||+|++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 6789999999999999999974 45678999998743 344566789999999984 2 4799999999754
Q ss_pred --CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---------
Q 005536 393 --GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN--------- 461 (692)
Q Consensus 393 --~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~--------- 461 (692)
.+.++|+|++ |-+|..+|....-+.++.....+|+.||+.||.|||..| +|||-||||+||||-.+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhh
Confidence 5899999999 889999999887788999999999999999999999986 99999999999998210
Q ss_pred --C-----------------------------------------------------------------------------
Q 005536 462 --Y----------------------------------------------------------------------------- 462 (692)
Q Consensus 462 --~----------------------------------------------------------------------------- 462 (692)
+
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence 0
Q ss_pred ------------------------------------------------------------------------------ce
Q 005536 463 ------------------------------------------------------------------------------RS 464 (692)
Q Consensus 463 ------------------------------------------------------------------------------~~ 464 (692)
.+
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 01
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCc---ccccHHHHH
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPH---SEVNLAALA 541 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~---~~~~~~~~~ 541 (692)
||+|||-|.... +..+.-..|..|.|||++.+..|+..+|||||+|++|||+||-..|+...-. .+.+..+.+
T Consensus 394 KIaDlGNACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 394 KIADLGNACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred EEeeccchhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 222222222100 1112223577899999999999999999999999999999999988632211 112222223
Q ss_pred HHHhc--------cCc-cccccccc--------CC--------cCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 542 IDRIG--------RGC-VDEIIDPY--------LE--------PHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 542 ~~~~~--------~~~-~~ei~d~~--------l~--------~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
++.++ .|+ ..++++.. |+ -..-.|+.+...++.+++.-||+.+|++|||+.+.+
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl- 548 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL- 548 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh-
Confidence 33222 121 12232221 00 012346678889999999999999999999999887
Q ss_pred HHHhhhhccccccc
Q 005536 597 ELEHIRVSSWASNI 610 (692)
Q Consensus 597 ~L~~i~~~~~~~~~ 610 (692)
.++|....
T Consensus 549 ------~hPwLn~~ 556 (590)
T KOG1290|consen 549 ------KHPWLNPV 556 (590)
T ss_pred ------cCccccCC
Confidence 68887644
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.4e-27 Score=226.99 Aligned_cols=258 Identities=21% Similarity=0.328 Sum_probs=189.8
Q ss_pred hccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeC--CeeEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEE--GEPILV 398 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~--~~~~lV 398 (692)
.++|+..+++|+|.|+.||.|. ..+++.++||.+++ -..+...+|++||..|+ ||||++|++...+. ..+.||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678889999999999999998 45678899999984 45567889999999998 99999999998765 468899
Q ss_pred EEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CceEEeeecCCccCCC
Q 005536 399 YEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFGLSRLGMT 477 (692)
Q Consensus 399 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~kl~DFGla~~~~~ 477 (692)
+||+.|.+...+. ..|+...+.....|++.||.|+|+. ||+|||+||.|+++|.. ..++|+|+|+|.+...
T Consensus 114 FE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999887776544 2367777888899999999999995 99999999999999965 5799999999987433
Q ss_pred CCCcccccCCCCCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCc-------
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC------- 549 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 549 (692)
.. .....+.+..|--||.+-.. .|+..-|+||||++|.+|+..+.||-......+ .+. .....++...
T Consensus 186 ~~--eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D-QLV-kIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GK--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLV-KIAKVLGTDELYAYLNK 261 (338)
T ss_pred Cc--eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH-HHH-HHHHHhChHHHHHHHHH
Confidence 22 12333456677899987554 577889999999999999999999864433221 111 1111111000
Q ss_pred ccccccccCCcC-----CCccC--------HHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 550 VDEIIDPYLEPH-----RDAWT--------LSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 550 ~~ei~d~~l~~~-----~~~~~--------~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
..-.+|+..... +..|. .-...+..+|+.+.|..|-.+|||++|.+
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 000122222110 00110 01125788999999999999999999886
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-27 Score=237.53 Aligned_cols=262 Identities=24% Similarity=0.289 Sum_probs=193.3
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecC--CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC------
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYR--DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE------ 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~------ 392 (692)
...+|...+.+|.|.- .|-.+. .-.++.||+|++... +....++..+|..++..++|+|+++++.++.-.
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 3456777788899988 444443 234788999998644 344567788999999999999999999998643
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
...++||||| ..+|.+.++.. ++-.+...|..|++.|++|||+. +|+||||||+||++..+..+||.|||+|
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILME----LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 3689999999 67999888733 77888899999999999999995 9999999999999999999999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHH--------HHHHHH
Q 005536 473 RLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA--------ALAIDR 544 (692)
Q Consensus 473 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~--------~~~~~~ 544 (692)
+.. +.....+....|..|.|||++.+..+.+.+||||.||++.||++|+.-|......++.... ..+.++
T Consensus 166 r~e--~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTE--DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred ccc--CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 852 2224567778899999999998888999999999999999999999888633221111110 011111
Q ss_pred hc-------c-------Ccccccc-cccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 545 IG-------R-------GCVDEII-DPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 545 ~~-------~-------~~~~ei~-d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+. + -...+.+ |....... +.+.-......+|+.+||..+|++|-+.++++
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~-e~~~~~~~~ardll~~MLvi~pe~Risv~daL 308 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVL-EGSKLDCSLARDLLSKMLVIDPEKRISVDDAL 308 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccc-cCCccchHHHHHHHHHhhccChhhcccHHHHh
Confidence 11 0 0111111 11111111 11112234678899999999999999988876
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-28 Score=255.44 Aligned_cols=195 Identities=25% Similarity=0.294 Sum_probs=166.0
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCc--------hhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeC
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDT--------DSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEE 392 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~ 392 (692)
.|...+.||+|+||.|+.+..+. ...|+||.+.+..- ...-..-.|++||..++ |+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 47888999999999999998655 56789998875421 11112446999999997 99999999999999
Q ss_pred CeeEEEEEeC-CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecC
Q 005536 393 GEPILVYEFM-PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGL 471 (692)
Q Consensus 393 ~~~~lV~E~~-~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGl 471 (692)
+.+||+||-. ++.+|++++..+ ..+++.+...|..|++.|+++||+ ++|||||||-+|+.+|.+|-+||+|||.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccc
Confidence 9999999986 456899999764 459999999999999999999999 5999999999999999999999999999
Q ss_pred CccCCCCCCcccccCCCCCCCCCccccccCCCCC-ccceeehhHHHHHHHhCCcccC
Q 005536 472 SRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD-KSDVYSFGVVLIEIITALKVVD 527 (692)
Q Consensus 472 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-ksDV~SfGvll~eLltg~~p~~ 527 (692)
|.+. .+......+||.+|.|||++.+.+|-- .-|||++|++||.++....|+.
T Consensus 717 aa~~---ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYT---KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhh---cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 8652 233445678999999999999988754 5899999999999999888874
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4e-26 Score=222.10 Aligned_cols=255 Identities=17% Similarity=0.246 Sum_probs=189.5
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEE-EEeCCeeEEEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGC-CIEEGEPILVY 399 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~-~~~~~~~~lV~ 399 (692)
.+.|.+.+.||+|.||.+-++..+. .+.+++|.+... ....++|.+|...--.| .|.||+.-++. |...+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 4678889999999999999998654 567888888654 45678899998876666 49999998875 45667888999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc--CCCceEEeeecCCccCCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD--YNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld--~~~~~kl~DFGla~~~~~ 477 (692)
||+|.|+|..-+.. ..+.+..-.+++.|+++||.|||+ +.++|||||.+|||+- +..++||+|||+.+....
T Consensus 102 E~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999887765 348888889999999999999999 5999999999999992 345899999999874211
Q ss_pred CCCcccccCCCCCCCCCcccccc-----CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQY-----FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDE 552 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 552 (692)
.......+..|.+||.... ....+.+|||.||++++.++||..||... ...+.... -+.++..+....
T Consensus 176 ----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~~Y~--~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 176 ----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDKPYW--EWEQWLKRKNPA 248 (378)
T ss_pred ----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCchHH--HHHHHhcccCcc
Confidence 1122335678999997532 24567899999999999999999999732 22223333 333444443332
Q ss_pred cccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005536 553 IIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEH 600 (692)
Q Consensus 553 i~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~ 600 (692)
+.+. .. ...+.+.++.++-|..++++|-...++.++-..
T Consensus 249 ~P~~-----F~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 249 LPKK-----FN----PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred Cchh-----hc----ccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 2221 11 123467788999999999999666666555433
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-26 Score=248.24 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=200.1
Q ss_pred hhccCccceeecccccEEEEEEEE-eCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKL-HNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYE 400 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E 400 (692)
..+.|+..+++|.|.||.|||++. ..++..|||.++....+...-.++|+-+++.-+|+|||.++|.+...+..++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 345678889999999999999984 4588999999998877788888899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 401 FMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 401 ~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
|+.+|+|.+.-+-. .++++.++-...++..+||+|||+. +=+|||||-.|||+++.+.+|++|||.+-.+.. .-
T Consensus 93 ycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita-ti 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA-TI 166 (829)
T ss_pred ecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh-hh
Confidence 99999998866543 5688889999999999999999994 889999999999999999999999999865322 22
Q ss_pred cccccCCCCCCCCCcccc---ccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccccc
Q 005536 481 HISTAPQGTPGYLDPQYH---QYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPY 557 (692)
Q Consensus 481 ~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~ 557 (692)
.......||+.|||||+. +.+.|..++|||+.|+...||---++|...-. ...+...+.+. .+++-
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-------pmr~l~LmTkS----~~qpp 235 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-------PMRALFLMTKS----GFQPP 235 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-------hHHHHHHhhcc----CCCCC
Confidence 233456799999999974 45678999999999999999987766643211 11122222221 11221
Q ss_pred CCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 558 LEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 558 l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
-..+... ..+.+-++++.+|-.+|++||+++.++
T Consensus 236 ~lkDk~k----ws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 236 TLKDKTK----WSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred cccCCcc----chHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1112222 335678899999999999999988654
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=3.7e-26 Score=239.07 Aligned_cols=274 Identities=21% Similarity=0.213 Sum_probs=206.9
Q ss_pred CChHHHHHhhccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCC------CCCeeeeE
Q 005536 314 YPYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS------HPNLLRLL 386 (692)
Q Consensus 314 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~------H~niv~l~ 386 (692)
|.+.-.+....+|.+....|+|-|++|..|.... ++.||||+++.. +.-.+.=+.|++||++|+ .-|.++|+
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 4445556677889999999999999999998543 779999999854 233345578999999996 35899999
Q ss_pred EEEEeCCeeEEEEEeCCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-Cce
Q 005536 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERG-SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRS 464 (692)
Q Consensus 387 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~ 464 (692)
-.|...++++||+|.+ ..+|.+.|.+... -.|........+.|+.-||..|... +|+|.||||.|||+++. ..+
T Consensus 501 r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCccee
Confidence 9999999999999998 6799999987643 3488888999999999999999985 99999999999999876 568
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHH--
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI-- 542 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~-- 542 (692)
||+|||.|...... ..+...-...|.|||++.+.+|+..-|+||.||.||||.||+..|..........+.+...
T Consensus 577 KLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 577 KLCDFGSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred eeccCccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 99999998653222 2233344568999999999999999999999999999999999997654433332222211
Q ss_pred ---HHhccCcc-cccccccC----------------------Cc------------CCCccCHHHHHHHHHHHHHhcccC
Q 005536 543 ---DRIGRGCV-DEIIDPYL----------------------EP------------HRDAWTLSSIHNVAELAFRCLAFH 584 (692)
Q Consensus 543 ---~~~~~~~~-~ei~d~~l----------------------~~------------~~~~~~~~~~~~l~~L~~~Cl~~~ 584 (692)
.++++|.+ +.-+|..+ .+ ......+..+..+.+|+.+||..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 11222211 11111110 11 011223456778999999999999
Q ss_pred CCCCCCHHHHH
Q 005536 585 RDMRPTMMEVA 595 (692)
Q Consensus 585 p~~RPsm~eVl 595 (692)
|++|.|..+.+
T Consensus 734 P~KRit~nqAL 744 (752)
T KOG0670|consen 734 PEKRITVNQAL 744 (752)
T ss_pred hhhcCCHHHHh
Confidence 99999988876
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=3.4e-26 Score=272.04 Aligned_cols=195 Identities=19% Similarity=0.241 Sum_probs=139.7
Q ss_pred hCCC-CCeeeeEEEE-------EeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 005536 376 SVSH-PNLLRLLGCC-------IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIY 447 (692)
Q Consensus 376 ~l~H-~niv~l~g~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~ii 447 (692)
.++| +||+++++++ .+.+.+++++||+ +++|.++|... ...+++..++.++.||++||+|||+ ++|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHS---QGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHh---CCee
Confidence 4556 6888888887 3335678889988 67999999754 3459999999999999999999998 5999
Q ss_pred ecCCCCCceEEcC-------------------CCceEEeeecCCccCCCCCC---------------cccccCCCCCCCC
Q 005536 448 HRDIKSSNILLDY-------------------NYRSKVADFGLSRLGMTESS---------------HISTAPQGTPGYL 493 (692)
Q Consensus 448 HrDik~~NILld~-------------------~~~~kl~DFGla~~~~~~~~---------------~~~~~~~gt~~Y~ 493 (692)
||||||+||||+. ++.+||+|||+++....... .......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 44566667776653110000 0011235889999
Q ss_pred CccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHH
Q 005536 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNV 573 (692)
Q Consensus 494 aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l 573 (692)
|||++.+..++.++|||||||+||||++|..|+.... .....+... .+.+.. .....+.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---------~~~~~~~~~----~~~~~~--------~~~~~~~ 241 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---------RTMSSLRHR----VLPPQI--------LLNWPKE 241 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---------HHHHHHHHh----hcChhh--------hhcCHHH
Confidence 9999999999999999999999999999877754110 011111111 011100 0112345
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 005536 574 AELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 574 ~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
.+++.+||+.+|.+||+|.||++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhh
Confidence 68889999999999999999974
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=8.5e-25 Score=225.70 Aligned_cols=266 Identities=22% Similarity=0.323 Sum_probs=193.7
Q ss_pred HHHhhccCccceeecccccEEEEEEEEeC----CCEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCC
Q 005536 319 IEKATSFFSEKHRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEG 393 (692)
Q Consensus 319 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~ 393 (692)
+....+.|...++||+|.|++||++++.. ++.||+|.+... ..-....+|++.|..+. +.||+++.+++..++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 33455678889999999999999998543 578999999764 33456889999999996 999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-CCceEEeeecCC
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-NYRSKVADFGLS 472 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-~~~~kl~DFGla 472 (692)
+..+|+||++...-.+++.. ++...+......+..||+++|+ +|||||||||+|+|.+. .+.-.|.|||+|
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhH
Confidence 99999999999888887754 6678888899999999999999 59999999999999975 467889999998
Q ss_pred ccCCC-------CC--------------------------C----------cccccCCCCCCCCCccccc-cCCCCCccc
Q 005536 473 RLGMT-------ES--------------------------S----------HISTAPQGTPGYLDPQYHQ-YFHLSDKSD 508 (692)
Q Consensus 473 ~~~~~-------~~--------------------------~----------~~~~~~~gt~~Y~aPE~~~-~~~~s~ksD 508 (692)
..... .. . ......+||+||.|||++. ....+++.|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 61000 00 0 0011235999999999865 456788999
Q ss_pred eeehhHHHHHHHhCCcccCCCCCcccccHHHHHH----HHh-----ccCc--c---------ccccc-------ccCCc-
Q 005536 509 VYSFGVVLIEIITALKVVDFSRPHSEVNLAALAI----DRI-----GRGC--V---------DEIID-------PYLEP- 560 (692)
Q Consensus 509 V~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~----~~~-----~~~~--~---------~ei~d-------~~l~~- 560 (692)
|||-|||++-+++++.||-.....-+ .+.+.+. ..+ -.|+ + .+... ..+..
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~-al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDAD-ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred eeeccceeehhhccccccccCccccc-hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 99999999999999999964332211 1111000 000 0111 0 00000 00000
Q ss_pred -----CCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 561 -----HRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 561 -----~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
....+.......+.+|..+|+..||.+|-|++|.+
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeAL 379 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDAL 379 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHh
Confidence 11112222234688999999999999999999987
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=2.1e-24 Score=208.96 Aligned_cols=171 Identities=20% Similarity=0.214 Sum_probs=128.3
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|+|.+++... +..++|..++.|+.|++.||+|||+. + ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999764 35699999999999999999999994 3 999999999999999 9998763221
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
...||+.|+|||++.+..++.++||||||+++|||+||+.|+....... .........+... ++.. ..
T Consensus 63 ~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~------~~~~----~~ 130 (176)
T smart00750 63 QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPAD------DPRD----RS 130 (176)
T ss_pred cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccC------Cccc----cc
Confidence 1268999999999999999999999999999999999999986432211 1111111111110 0000 00
Q ss_pred cCHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcc
Q 005536 565 WTLSSIH--NVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 605 (692)
Q Consensus 565 ~~~~~~~--~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~ 605 (692)
....... ++.+++.+||+.+|++||++.|+++.+..+....
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 0112222 6899999999999999999999999888775543
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6.4e-23 Score=218.49 Aligned_cols=261 Identities=19% Similarity=0.194 Sum_probs=197.5
Q ss_pred cCccceeecccccEEEEEEEEeCC--CEEEEEEeecCCchhHHHHHHHHHHHHhCCC----CCeeeeEEEE-EeCCeeEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHND--DWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH----PNLLRLLGCC-IEEGEPIL 397 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~~--~~vavK~~~~~~~~~~~~~~~E~~il~~l~H----~niv~l~g~~-~~~~~~~l 397 (692)
+|...++||+|+||.||++..... ..+|+|............+..|+.++..+.+ +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986553 4788888776533333378889999998873 6899999998 47778999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-----CceEEeeecCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-----YRSKVADFGLS 472 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-----~~~kl~DFGla 472 (692)
||+.+ +.+|.++........++..+.++|+.|++.+|.+||+. +++||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99998 88999987665556799999999999999999999995 99999999999999865 46999999999
Q ss_pred c--cCCCCCCc--c-----cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH
Q 005536 473 R--LGMTESSH--I-----STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 473 ~--~~~~~~~~--~-----~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~ 543 (692)
+ ........ . .....||..|.++..+.+...+.+.|+||++.++.|++.|..||..........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~------- 247 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS------- 247 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH-------
Confidence 8 32222211 1 123459999999999999999999999999999999999999985433222211
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
.+.+......... .. .....++.++...+-..+..++|....+...|++....
T Consensus 248 ~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 248 KFEKDPRKLLTDR-----FG---DLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHHhhhhcccc-----cc---CCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1111111111111 00 11223455555556668999999999999998887654
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.6e-23 Score=223.37 Aligned_cols=171 Identities=19% Similarity=0.126 Sum_probs=131.8
Q ss_pred hHHHHHhhccCccceeecccccEEEEEEEEe--CCCEEEEEEeecC-----CchhHHHHHHHHHHHHhCCCCCeeeeEEE
Q 005536 316 YKEIEKATSFFSEKHRLGTGAYGTVYAGKLH--NDDWVAIKRFRYR-----DTDSIDQVMNEIKLLSSVSHPNLLRLLGC 388 (692)
Q Consensus 316 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~il~~l~H~niv~l~g~ 388 (692)
-.......++|...+.||+|+||+||+|... +++.||||++... .....+.|.+|+++|++++|+|++..+..
T Consensus 10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~ 89 (365)
T PRK09188 10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA 89 (365)
T ss_pred ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence 3444556678999999999999999999864 4677899987533 12235678999999999999999853332
Q ss_pred EEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceEEcCCCceEEe
Q 005536 389 CIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDI-KSSNILLDYNYRSKVA 467 (692)
Q Consensus 389 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDi-k~~NILld~~~~~kl~ 467 (692)
.+..+|||||+++++|.. +... . ...++.+++++|+|||+ ++|+|||| ||+|||++.++.+||+
T Consensus 90 ---~~~~~LVmE~~~G~~L~~-~~~~-----~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 90 ---TGKDGLVRGWTEGVPLHL-ARPH-----G---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred ---cCCcEEEEEccCCCCHHH-hCcc-----c---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEE
Confidence 246799999999999963 2111 1 14678899999999999 49999999 9999999999999999
Q ss_pred eecCCccCCCCCCc-------ccccCCCCCCCCCccccccC
Q 005536 468 DFGLSRLGMTESSH-------ISTAPQGTPGYLDPQYHQYF 501 (692)
Q Consensus 468 DFGla~~~~~~~~~-------~~~~~~gt~~Y~aPE~~~~~ 501 (692)
|||+|+........ ..+...+++.|++||++...
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999864332211 11355788999999987544
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=5.5e-24 Score=206.94 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=190.7
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCC--chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCC
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGT 406 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs 406 (692)
..+|.+...|..|+|++..+. +++|+++..+ ....++|..|.-.|+-+.||||+.++|.|.....+.++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346888999999999997654 6777776542 3345679999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec-CCCCCceEEcCCCceEEeeecCCccCCCCCCccccc
Q 005536 407 LCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHR-DIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTA 485 (692)
Q Consensus 407 L~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHr-Dik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 485 (692)
|+..|+...+-.++..+..++|.++|+|++|||+. .+++-| -|.+..+++|++.+++|+= +-.++ +.....
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl--ep~ipr~~lns~hvmidedltarism-ad~kf-----sfqe~g 345 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL--EPMIPRFYLNSKHVMIDEDLTARISM-ADTKF-----SFQEVG 345 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc--chhhhhhhcccceEEecchhhhheec-cccee-----eeeccc
Confidence 99999987666688889999999999999999997 355544 6899999999999988751 11111 111122
Q ss_pred CCCCCCCCCccccccCCCC---CccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCC
Q 005536 486 PQGTPGYLDPQYHQYFHLS---DKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHR 562 (692)
Q Consensus 486 ~~gt~~Y~aPE~~~~~~~s---~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~ 562 (692)
..-.|.||+||.++..+-+ ...|+|||+++||||.|+..||..-.+-+-- ++ + .+.+.+
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------mk-i-----------aleglr 407 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------MK-I-----------ALEGLR 407 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------hh-h-----------hhcccc
Confidence 3457889999998876544 3689999999999999999999644332110 00 0 011122
Q ss_pred CccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 563 DAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 563 ~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
...+......+.+|+.-|...||.+||.+..|+-.||+++
T Consensus 408 v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 408 VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 2233445567889999999999999999999999999864
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=5.7e-21 Score=200.27 Aligned_cols=260 Identities=27% Similarity=0.400 Sum_probs=197.7
Q ss_pred CccceeecccccEEEEEEEEeCCCEEEEEEeecCCch---hHHHHHHHHHHHHhCCCC-CeeeeEEEEEeCCeeEEEEEe
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD---SIDQVMNEIKLLSSVSHP-NLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~H~-niv~l~g~~~~~~~~~lV~E~ 401 (692)
|...+.||.|+||.||++... ..+++|.+...... ....|.+|+.++..+.|+ +++++.+.+......++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999876 78999999765332 477899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC-ceEEeeecCCccCCCCC
Q 005536 402 MPNGTLCQHLQRERG-SGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLGMTES 479 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~-~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~-~~kl~DFGla~~~~~~~ 479 (692)
+.+++|.+++..... ..+.......+..|++.++.|+|+. +++|||+||+||+++... .+++.|||+++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999976665421 2588999999999999999999995 899999999999999998 79999999997533322
Q ss_pred Cc-----ccccCCCCCCCCCcccccc---CCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 480 SH-----ISTAPQGTPGYLDPQYHQY---FHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 480 ~~-----~~~~~~gt~~Y~aPE~~~~---~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
.. ......||..|++||.+.+ ...+...|+||+|++++++++|..|+...... .......+.+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 21 2456689999999999987 57888999999999999999999996543321 0111122222221111
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEE 597 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~ 597 (692)
.. ..... ..........+.+++..++..+|..|.++.+....
T Consensus 234 ~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 SL-ASPLS---PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cc-ccccC---ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 00000 00001223567889999999999999998887754
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.9e-21 Score=193.31 Aligned_cols=263 Identities=17% Similarity=0.201 Sum_probs=204.8
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~ 399 (692)
.--+|.+.++||+|.||..+.|+ +-+++.||||.-.. ..+..++..|....+.|. .++|...+.+..++.+-.||+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 34579999999999999999998 67899999998654 344567888988888885 799999999989988999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-----CceEEeeecCCcc
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-----YRSKVADFGLSRL 474 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-----~~~kl~DFGla~~ 474 (692)
|++ |-+|+|++.-. ++.++..+...||.|++.-++|+|+. .+|.|||||+|+||..- ..+.|.|||+|+.
T Consensus 104 dLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999 88999877654 57799999999999999999999994 99999999999999643 4689999999987
Q ss_pred CCCCCCcc------cccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccC
Q 005536 475 GMTESSHI------STAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 475 ~~~~~~~~------~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
..+..+.. ....-||.+||+-..+.+...+.+.|.-|+|-+++..|-|..||..-..... ..-.++|++.
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn----K~kYeKIGe~ 254 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN----KEKYEKIGET 254 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch----HHHHHHhccc
Confidence 55433322 2345699999999999999999999999999999999999999974332211 1223444432
Q ss_pred cccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005536 549 CVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRV 603 (692)
Q Consensus 549 ~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~ 603 (692)
.-.- ...+.....+++++.-+.-.-..+-++-|+.+-+...+..+-.
T Consensus 255 Kr~T--------~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 255 KRST--------PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred cccC--------CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 2111 1112223345666676666677788889999888777766543
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=6.8e-21 Score=182.92 Aligned_cols=262 Identities=18% Similarity=0.236 Sum_probs=203.0
Q ss_pred hhccCccceeecccccEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCC-CCeeeeEEEEEeCCeeEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH-PNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H-~niv~l~g~~~~~~~~~lV~ 399 (692)
...+|...++||.|+||.+|.|. ..+|..||||.-... ....++.-|.++...|+| ..|..+..+..+.+.-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34679999999999999999998 667999999986543 344567889999999975 78888888889999999999
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC---CceEEeeecCCccCC
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN---YRSKVADFGLSRLGM 476 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~---~~~kl~DFGla~~~~ 476 (692)
|.+ +.+|++++.-. .+.++..+.+.+|-|++.-++|+|. +++|||||||+|+|..-+ ..+.++|||+|+...
T Consensus 91 dLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999 88999988754 3558999999999999999999999 599999999999999644 468999999998644
Q ss_pred CCCC--c----ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcc
Q 005536 477 TESS--H----ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCV 550 (692)
Q Consensus 477 ~~~~--~----~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (692)
+..+ | ......||.+|.+-..+.+...+.+.|+-|+|.+|..+.-|..||..-........ .+++.+...
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK----yEkI~EkK~ 241 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK----YEKISEKKM 241 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH----HHHHHHhhc
Confidence 3222 2 23455699999998888888889999999999999999999999975544333222 223322222
Q ss_pred cccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 551 DEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 551 ~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.-.+ +......+.++.-.+.-|-...-++-|+..-+-+.++-+.
T Consensus 242 s~~i--------e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 242 STPI--------EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred CCCH--------HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 1111 1122234457777888898888899999887777666554
No 412
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=1.2e-20 Score=187.57 Aligned_cols=172 Identities=13% Similarity=0.081 Sum_probs=134.0
Q ss_pred hhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHH---H------HHHHHHHHHhCCCCCeeeeEEEEEeC
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSID---Q------VMNEIKLLSSVSHPNLLRLLGCCIEE 392 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~il~~l~H~niv~l~g~~~~~ 392 (692)
..++|...+.||.|+||.||.... ++..+|||.++........ . |.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 568899999999999999999655 5778999999765332222 2 67999999999999999999986643
Q ss_pred --------CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 393 --------GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 393 --------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
...+|||||++|.+|.++.. ++. ....+++.+|..||+. +++|||+||+||+++.++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 35789999999999988732 222 3456999999999994 999999999999999988 9
Q ss_pred EEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHh
Q 005536 465 KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIIT 521 (692)
Q Consensus 465 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLlt 521 (692)
+|+|||.......+... ..+.....+..++|+|+||+.+.-+..
T Consensus 174 ~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 99999988653221111 013334456679999999999887654
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.3e-20 Score=182.98 Aligned_cols=138 Identities=17% Similarity=0.150 Sum_probs=108.1
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCch--h-------HHH-----------------HHHHHHHHHhCCCCCe
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD--S-------IDQ-----------------VMNEIKLLSSVSHPNL 382 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~il~~l~H~ni 382 (692)
...||+|+||.||+|...+|+.||||+++..... . ... ..+|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999888999999999754211 1 112 2349999999988877
Q ss_pred eeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCceEEcCC
Q 005536 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYL-HSAMNPPIYHRDIKSSNILLDYN 461 (692)
Q Consensus 383 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yL-H~~~~~~iiHrDik~~NILld~~ 461 (692)
........ ...+|||||++++++...+.. ...+++.....++.|++.+|.|| |+ .+|+||||||+|||++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-C
Confidence 54433322 234899999988877654332 24588999999999999999999 56 4999999999999998 4
Q ss_pred CceEEeeecCCcc
Q 005536 462 YRSKVADFGLSRL 474 (692)
Q Consensus 462 ~~~kl~DFGla~~ 474 (692)
+.++|+|||+|..
T Consensus 154 ~~v~LiDFG~a~~ 166 (190)
T cd05147 154 GKLYIIDVSQSVE 166 (190)
T ss_pred CcEEEEEcccccc
Confidence 7899999999974
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.1e-21 Score=218.79 Aligned_cols=260 Identities=22% Similarity=0.246 Sum_probs=189.1
Q ss_pred ccceeecccccEEEEEEEEe-CCCEEEEEEeec---CC--ch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 327 SEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRY---RD--TD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 327 ~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~---~~--~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
...+.+|.|++|.|+..... .....+.|.++. .. .. ....+..|+.+-..++|+|++..+....+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34668999999977766533 333344444331 11 11 1122667888888999999988887777666555669
Q ss_pred EeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC-
Q 005536 400 EFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE- 478 (692)
Q Consensus 400 E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~- 478 (692)
||+++ +|+.++... ..++...+..+..|+..|++|||+. +|.|||||++|++++.++.+||+|||.+..+...
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 999998764 3588888899999999999999995 9999999999999999999999999998764322
Q ss_pred --CCcccccCCCCCCCCCccccccCCCCCc-cceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccccccc
Q 005536 479 --SSHISTAPQGTPGYLDPQYHQYFHLSDK-SDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 555 (692)
Q Consensus 479 --~~~~~~~~~gt~~Y~aPE~~~~~~~s~k-sDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d 555 (692)
.........|...|+|||.+.+..|.+. .||||.|+++..|++|+.||.......... .+....+....
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~~~~~--- 546 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSDQRNI--- 546 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcccccccc---
Confidence 2255567789999999999999999875 899999999999999999997554433221 00000000000
Q ss_pred ccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhccccccc
Q 005536 556 PYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNI 610 (692)
Q Consensus 556 ~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~~ 610 (692)
...........+.+...++.++|+.+|.+|-||++|+ ...|...+
T Consensus 547 ---~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~-------~d~W~~~i 591 (601)
T KOG0590|consen 547 ---FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQIL-------NDEWIRSI 591 (601)
T ss_pred ---ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHh-------hChHhhhc
Confidence 0011111234456778899999999999999988877 56676533
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.6e-19 Score=175.90 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=111.0
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCch--h------------------------HHHHHHHHHHHHhCCCCCe
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD--S------------------------IDQVMNEIKLLSSVSHPNL 382 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~il~~l~H~ni 382 (692)
...||+|+||.||+|+..+|+.||||+++..... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999878999999999865211 0 1224578999999999988
Q ss_pred eeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 383 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
.....+... ..+|||||++++++....... ..++.....+++.|++.+|.+||+. .+|+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE-CC
Confidence 555444333 348999999888654432222 3477888999999999999999983 3999999999999999 88
Q ss_pred ceEEeeecCCccC
Q 005536 463 RSKVADFGLSRLG 475 (692)
Q Consensus 463 ~~kl~DFGla~~~ 475 (692)
.++|+|||++...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 9999999999753
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=8.1e-20 Score=198.29 Aligned_cols=219 Identities=25% Similarity=0.410 Sum_probs=166.6
Q ss_pred HHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 005536 374 LSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKS 453 (692)
Q Consensus 374 l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~ 453 (692)
|+.+.|.|+.+++|.+.++...++|.+|+..|+|.|.+... ...++|.....+..+++.||+|||+. +-.+|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeecc
Confidence 35688999999999999999999999999999999999873 46699999999999999999999995 3339999999
Q ss_pred CceEEcCCCceEEeeecCCccCCC-CCCcccccCCCCCCCCCccccccC-------CCCCccceeehhHHHHHHHhCCcc
Q 005536 454 SNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYF-------HLSDKSDVYSFGVVLIEIITALKV 525 (692)
Q Consensus 454 ~NILld~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDV~SfGvll~eLltg~~p 525 (692)
+|.++|..+.+||+|||+..+... ..........-..-|.|||.+... ..+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 999999999999999999876432 111111222245679999987663 246789999999999999999999
Q ss_pred cCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhc
Q 005536 526 VDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 604 (692)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~ 604 (692)
|+......+. .....+++++ ....+-|.+... . +..+++..++.+||..+|.+||++++|-..++.+...
T Consensus 158 ~~~~~~~~~~---~eii~~~~~~-~~~~~rP~i~~~----~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 158 FDLRNLVEDP---DEIILRVKKG-GSNPFRPSIELL----N-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccccCCh---HHHHHHHHhc-CCCCcCcchhhh----h-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9864443332 2222223331 112222222211 0 3334788999999999999999999999988887654
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-20 Score=213.03 Aligned_cols=252 Identities=19% Similarity=0.204 Sum_probs=185.5
Q ss_pred cCccceeecccccEEEEEEEEeCCCEEEEEEeecCC-chhHHHHHHHHHH--HHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD-TDSIDQVMNEIKL--LSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~-~~~~~~~~~E~~i--l~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
++...+.||.+.|=+|.+++.++|. |+||++-+.+ .-..+.|.++++- ...++|||.+.+.-+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5677788999999999999988887 9999987665 3345555544433 4556899999998887777788999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc--CCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL--GMTES 479 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~--~~~~~ 479 (692)
+. -+|+|.|... ..|...+...||.|++.||...|.. +|+|||||.+||||+.-.-+.|+||..-+. .+.++
T Consensus 103 vk-hnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred Hh-hhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 84 5898888643 4478888899999999999999995 999999999999999999999999987654 22222
Q ss_pred Ccc----cccCCCCCCCCCcccccc----------CC-CCCccceeehhHHHHHHHh-CCcccCCCCCcccccHHHHHHH
Q 005536 480 SHI----STAPQGTPGYLDPQYHQY----------FH-LSDKSDVYSFGVVLIEIIT-ALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 480 ~~~----~~~~~gt~~Y~aPE~~~~----------~~-~s~ksDV~SfGvll~eLlt-g~~p~~~~~~~~~~~~~~~~~~ 543 (692)
... .........|+|||.+.. .. ++++.||||+||+++||++ |+++|+ +.+.+..
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~---------LSQL~aY 247 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT---------LSQLLAY 247 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc---------HHHHHhH
Confidence 221 222334568999997643 12 7789999999999999998 577775 3333222
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
++|. .......+....+ ..+.+|+..|++.||++|.++++.++.-+++.
T Consensus 248 --r~~~-~~~~e~~Le~Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 248 --RSGN-ADDPEQLLEKIED-------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred --hccC-ccCHHHHHHhCcC-------ccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 2221 1100111111111 14678999999999999999999998866554
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=9.7e-19 Score=170.39 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=138.3
Q ss_pred ccceeecccccEEEEEEEEeCCCEEEEEEeecCCch----hHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEe
Q 005536 327 SEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD----SIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 327 ~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~----~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
.+...|++|+||+||.+.. ++..++.+.+.....- ....|.+|+++|++|. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997655 6777888877654221 1225889999999995 5889999886 346999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceEEcCCCceEEeeecCCccCCCCCC
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDI-KSSNILLDYNYRSKVADFGLSRLGMTESS 480 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDi-k~~NILld~~~~~kl~DFGla~~~~~~~~ 480 (692)
+++.+|.+.+.. ....++.|++.+|+++|+. +|+|||| ||+|||++.++.++|+|||++........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998754321 1135778999999999994 9999999 79999999999999999999985332221
Q ss_pred c----c--------cccCCCCCCCCCccccccC-CCC-CccceeehhHHHHHHHhCCcccC
Q 005536 481 H----I--------STAPQGTPGYLDPQYHQYF-HLS-DKSDVYSFGVVLIEIITALKVVD 527 (692)
Q Consensus 481 ~----~--------~~~~~gt~~Y~aPE~~~~~-~~s-~ksDV~SfGvll~eLltg~~p~~ 527 (692)
. . ......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+.-
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 0 0 1122378899999854322 223 46789999999999999987653
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=2.7e-18 Score=170.12 Aligned_cols=137 Identities=21% Similarity=0.225 Sum_probs=107.7
Q ss_pred CccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-----CCCCeeeeEEEEEeCC---e-eE
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-----SHPNLLRLLGCCIEEG---E-PI 396 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-----~H~niv~l~g~~~~~~---~-~~ 396 (692)
....+.||+|+||.||. ..+....+||+.........+++.+|+.+++.+ +||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34567899999999996 333333479988766555667899999999999 5799999999998873 3 34
Q ss_pred EEEEe--CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCceEEcC----CCceEEeee
Q 005536 397 LVYEF--MPNGTLCQHLQRERGSGLPWTIRITIATETAQAI-AYLHSAMNPPIYHRDIKSSNILLDY----NYRSKVADF 469 (692)
Q Consensus 397 lV~E~--~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL-~yLH~~~~~~iiHrDik~~NILld~----~~~~kl~DF 469 (692)
+|+|| .++++|.+++.+. .+++. ..++.+++.++ +|||+. +|+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 5579999999653 25555 35677888777 999994 9999999999999974 348999995
Q ss_pred cCC
Q 005536 470 GLS 472 (692)
Q Consensus 470 Gla 472 (692)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 444
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.78 E-value=1.3e-18 Score=178.11 Aligned_cols=232 Identities=18% Similarity=0.207 Sum_probs=152.0
Q ss_pred cCccceeecccccEEEEEEEEeC-CCEEEEEEeecCC---chhHHHHHHHHHHHHhCCC----------CCeeeeEEEEE
Q 005536 325 FFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSH----------PNLLRLLGCCI 390 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H----------~niv~l~g~~~ 390 (692)
.+...+.||.|+++.||.++..+ ++.+|||.+.... ....+++.+|.-.+..+.+ -.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 44557789999999999999765 7899999987553 2356777777766655433 12222222221
Q ss_pred ---------eC---C-----eeEEEEEeCCCCCHHHHHhh---ccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 005536 391 ---------EE---G-----EPILVYEFMPNGTLCQHLQR---ERG--SGLPWTIRITIATETAQAIAYLHSAMNPPIYH 448 (692)
Q Consensus 391 ---------~~---~-----~~~lV~E~~~~gsL~~~l~~---~~~--~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiH 448 (692)
.. . ..+++|+-+ .++|.+.+.. ... ..+....++.+..|+++.+++||+. +++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 235677777 6788887543 211 1245666788889999999999995 9999
Q ss_pred cCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCCCcccccc--------CCCCCccceeehhHHHHHHH
Q 005536 449 RDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQY--------FHLSDKSDVYSFGVVLIEII 520 (692)
Q Consensus 449 rDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~ksDV~SfGvll~eLl 520 (692)
+||||+|+|++++|.++|+||+....... .... ...+..|.+||.... -.++.+.|.|++|++||.|.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT---RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE---EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc---eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999987654211 1111 345678999997533 35788999999999999999
Q ss_pred hCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCC
Q 005536 521 TALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMR 588 (692)
Q Consensus 521 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~R 588 (692)
+++.|++...+...... ....+. +.++.+.+|+..+|+.+|.+|
T Consensus 245 C~~lPf~~~~~~~~~~~-----------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW-----------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG-----------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc-----------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999985543222111 222334 677889999999999999988
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=5.5e-19 Score=191.63 Aligned_cols=231 Identities=25% Similarity=0.266 Sum_probs=178.8
Q ss_pred ecccccEEEEEEE----EeCCCEEEEEEeecCCch--hHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 332 LGTGAYGTVYAGK----LHNDDWVAIKRFRYRDTD--SIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 332 LG~G~fG~Vy~g~----~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+|+|.||.|+..+ ...+..+|.|.+++.... .......|..++...+ ||.+|++...+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7999999998653 344677898888754211 1125567888898887 99999999999999999999999999
Q ss_pred CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccc
Q 005536 405 GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHIST 484 (692)
Q Consensus 405 gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 484 (692)
|.|...+... ...+.........++|-+++++|+. +|+|||+|++||+++.+|.+|+.|||+++........
T Consensus 82 g~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 82 GDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred chhhhccccC--CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence 9999888764 3456666666778999999999996 9999999999999999999999999999874433221
Q ss_pred cCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCc
Q 005536 485 APQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDA 564 (692)
Q Consensus 485 ~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~ 564 (692)
.||..|||||++. .....+|.||||++.+||+||-.||.. ....+|.+. .-.
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----------~~~~~Il~~-------------~~~ 205 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----------DTMKRILKA-------------ELE 205 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----------HHHHHHhhh-------------ccC
Confidence 7999999999998 567799999999999999999988863 112222110 112
Q ss_pred cCHHHHHHHHHHHHHhcccCCCCCCCH--HHHHHHH
Q 005536 565 WTLSSIHNVAELAFRCLAFHRDMRPTM--MEVAEEL 598 (692)
Q Consensus 565 ~~~~~~~~l~~L~~~Cl~~~p~~RPsm--~eVl~~L 598 (692)
.+.+.......++..++..+|..|.-. ..+.+.+
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik 241 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK 241 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence 234555667788889999999999654 3444433
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=5e-18 Score=196.37 Aligned_cols=202 Identities=19% Similarity=0.239 Sum_probs=162.5
Q ss_pred ChHHHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC---CCCeeeeEEEEEe
Q 005536 315 PYKEIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIE 391 (692)
Q Consensus 315 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~ 391 (692)
+..+.+.-...|.+.+.||+|+||+||+|...+++.||+|+-+..+. -+|.-=.+++.+|+ -+-|..+..++.-
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHcc
Confidence 33455556678899999999999999999988899999999876532 22333334444454 3445555555666
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc-------CCCce
Q 005536 392 EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD-------YNYRS 464 (692)
Q Consensus 392 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld-------~~~~~ 464 (692)
.+.-+||+||.+.|||.+++.. .+.++|...+.++.|++..+.+||.. +|||+||||.|.||. ++..+
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred CCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccce
Confidence 7778999999999999999984 35699999999999999999999995 999999999999993 34569
Q ss_pred EEeeecCCccCCC-CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCc
Q 005536 465 KVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALK 524 (692)
Q Consensus 465 kl~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~ 524 (692)
+|+|||.+..+.. .........++|.++--+|...+..++.+.|.|.|+.+++-||.|+.
T Consensus 841 ~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 841 YLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999999864221 22345567789999999999999999999999999999999999954
No 423
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=2.9e-17 Score=163.96 Aligned_cols=134 Identities=20% Similarity=0.294 Sum_probs=114.3
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCch--------hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD--------SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
+.||+|++|.||+|.. ++..|++|+....... ...++.+|+.++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778999986543211 234678999999999999998888888788889999999
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
+++++|.+++.... + .+..++.+++.+|++||+. +++|||++|.|||++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 2 7889999999999999994 999999999999999 78999999999864
No 424
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=4.6e-17 Score=185.18 Aligned_cols=139 Identities=22% Similarity=0.291 Sum_probs=113.7
Q ss_pred HhhccCccceeecccccEEEEEEEEeCCCEEEEEEe-ecC-C------chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeC
Q 005536 321 KATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRF-RYR-D------TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEE 392 (692)
Q Consensus 321 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~-~~~-~------~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~ 392 (692)
.....|...++||+|+||+||+|.+.+.. +++|+. ... . ....+++.+|++++.+++|++++....++.+.
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 34455667889999999999999876554 444432 211 1 11235688999999999999999988888887
Q ss_pred CeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 393 GEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 393 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
...++||||+++++|.+++. .+..++.+++.+|+|||+ .+|+||||||+|||+ +++.++|+|||++
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 78899999999999999885 346799999999999999 499999999999999 6779999999999
Q ss_pred cc
Q 005536 473 RL 474 (692)
Q Consensus 473 ~~ 474 (692)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 75
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=4.5e-17 Score=165.23 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=110.5
Q ss_pred cCccceeecccccEEEEEEE--EeCCCEEEEEEeecCCch------------------------hHHHHHHHHHHHHhCC
Q 005536 325 FFSEKHRLGTGAYGTVYAGK--LHNDDWVAIKRFRYRDTD------------------------SIDQVMNEIKLLSSVS 378 (692)
Q Consensus 325 ~f~~~~~LG~G~fG~Vy~g~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~il~~l~ 378 (692)
.|+..+.||+|+||.||+|. ..+|+.||||+++..... ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47778899999999999998 567999999999754210 0123568999999997
Q ss_pred CC--CeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCc
Q 005536 379 HP--NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPP-IYHRDIKSSN 455 (692)
Q Consensus 379 H~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~-iiHrDik~~N 455 (692)
+. .+.+++++ ...++||||+++.+|...+... ..+.......++.|++.+|++||+. + |+||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 53 34455543 2358999999998887655332 2355666789999999999999995 8 9999999999
Q ss_pred eEEcCCCceEEeeecCCcc
Q 005536 456 ILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 456 ILld~~~~~kl~DFGla~~ 474 (692)
|+++ ++.++|+|||.+..
T Consensus 180 Ili~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEEE-CCCEEEEEChhhhc
Confidence 9999 88999999999874
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=8.6e-17 Score=159.04 Aligned_cols=130 Identities=22% Similarity=0.307 Sum_probs=107.8
Q ss_pred eecccccEEEEEEEEeCCCEEEEEEeecCCc--------hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT--------DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.||+|+||+||+|.+ ++..|++|....... ...+++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 677899998654311 12356789999999999887766666666777789999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
++++|.+++.... . .++.+++.+|++||+. +++|||++|.||+++ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998875431 0 7899999999999994 999999999999999 88999999999875
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.1e-16 Score=158.32 Aligned_cols=142 Identities=19% Similarity=0.147 Sum_probs=111.4
Q ss_pred HHHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCch----------------------hHHHHHHHHHHHH
Q 005536 318 EIEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD----------------------SIDQVMNEIKLLS 375 (692)
Q Consensus 318 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~il~ 375 (692)
++......|...+.||+|+||.||++...+++.||||+++..... ....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444447778899999999999999888999999987643210 1123677899999
Q ss_pred hCCCC--CeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 005536 376 SVSHP--NLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKS 453 (692)
Q Consensus 376 ~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~ 453 (692)
.+.|+ .+++.++ ....++||||+++++|.+.... .....++.+++.++.++|+ .+|+||||||
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYK---HGIIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCc
Confidence 99887 4555544 2456899999999998765431 2346788999999999999 4999999999
Q ss_pred CceEEcCCCceEEeeecCCcc
Q 005536 454 SNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 454 ~NILld~~~~~kl~DFGla~~ 474 (692)
+||++++++.++|+|||++..
T Consensus 154 ~Nill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred ccEEEcCCCcEEEEECCcccc
Confidence 999999999999999999964
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=5.8e-18 Score=180.45 Aligned_cols=174 Identities=24% Similarity=0.366 Sum_probs=131.3
Q ss_pred eeEEEEEeCCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 394 EPILVYEFMPNGTLCQHLQRER-GSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
.+++.|+++...+|.+||.+.+ ....+|...+.++.|++.|+.| ++.+|||+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 5789999999999999997443 4468899999999999999999 38999999999999999999999999998
Q ss_pred ccCCCCC-----CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 473 RLGMTES-----SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 473 ~~~~~~~-----~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
....... ....+...||..||+||.+.+.+|+.|+||||||++|+||++- |. ... ....+..-++.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~--T~~----er~~t~~d~r~ 474 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FS--TQF----ERIATLTDIRD 474 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hc--cHH----HHHHhhhhhhc
Confidence 6533332 2234666799999999999999999999999999999999982 11 100 11122333444
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEV 594 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eV 594 (692)
|.+++.+- .+++ +=..|+.+++.+.|.+||++.++
T Consensus 475 g~ip~~~~-------~d~p-----~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 475 GIIPPEFL-------QDYP-----EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CCCChHHh-------hcCc-----HHHHHHHHhcCCCcccCchHHHH
Confidence 43331110 1111 22578999999999999955444
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.6e-16 Score=162.72 Aligned_cols=181 Identities=21% Similarity=0.179 Sum_probs=124.9
Q ss_pred eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEE--cCCC--ceEEeee
Q 005536 394 EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILL--DYNY--RSKVADF 469 (692)
Q Consensus 394 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILl--d~~~--~~kl~DF 469 (692)
.+|+||... .-+|.++|..+. .+...+.-|..|+++|..|||.+ +|.|||+|+.|||| |+|. .+.|+||
T Consensus 317 tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 317 TLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred eEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccc
Confidence 568899887 459999997643 56667778888999999999995 99999999999999 4444 5789999
Q ss_pred cCCccCCC-----CCCcccccCCCCCCCCCccccccCC------CCCccceeehhHHHHHHHhCCcccCCCCCcccccHH
Q 005536 470 GLSRLGMT-----ESSHISTAPQGTPGYLDPQYHQYFH------LSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLA 538 (692)
Q Consensus 470 Gla~~~~~-----~~~~~~~~~~gt~~Y~aPE~~~~~~------~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~ 538 (692)
|.+--... ..........|...-||||+....+ --.|+|.|+.|.+.||+++...||..... .-.+..
T Consensus 390 GCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~r 468 (598)
T KOG4158|consen 390 GCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDTR 468 (598)
T ss_pred ceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heechh
Confidence 97642111 0001112234777889999875432 12489999999999999999999974211 111111
Q ss_pred HHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005536 539 ALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELE 599 (692)
Q Consensus 539 ~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~ 599 (692)
. +++..+ ...+...+..+.+|+...|+.||.+|++..-.+..|.
T Consensus 469 ~-----Yqe~qL------------Palp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 469 T-----YQESQL------------PALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred h-----hhhhhC------------CCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 1 111111 1222334457889999999999999998776555443
No 430
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=1.6e-15 Score=141.59 Aligned_cols=135 Identities=20% Similarity=0.198 Sum_probs=115.6
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCC--CCeeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH--PNLLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
+.+.||+|.++.||+++..+ ..+++|....... ..++.+|+.++..++| .++++++++....+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35689999999999999755 7799999865433 5678999999999976 59999999888888899999999887
Q ss_pred CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 406 TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 406 sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.+..+ +......++.+++.+|++||.....+++|+|++|+|||+++.+.+++.|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77543 5567788999999999999986445799999999999999999999999999875
No 431
>PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding
Probab=99.63 E-value=5.3e-16 Score=137.07 Aligned_cols=86 Identities=31% Similarity=0.677 Sum_probs=65.5
Q ss_pred CccccccCCCCCCCceeeccCCCCCCCC----ceEeecCC--Cc--ce--ecEEEEEeec--cEEEEeeC--CCccCCCC
Q 005536 22 ADLCDRTCRNGKSTKRVPYPFGFSPGCA----IRLTCANA--TV--KI--GEFEVQNVTA--DSIFVNLP--TKCHRQIT 87 (692)
Q Consensus 22 ~~~C~~~CG~~~~~~~ipYPFg~~~~C~----f~l~C~~~--~~--~~--~~~~v~~i~~--~~~~v~~~--~~C~~~~~ 87 (692)
+++|+++|| |++||||||++++|+ |+|+|+++ .+ ++ ++|+|++|++ .+++|..+ ..|+....
T Consensus 1 ~~~C~~~CG----nv~IpYPFgi~~~C~~~~~F~L~C~~~~~~~~l~l~~~~~~V~~I~~~~~~i~v~~~~~~~~~~~~~ 76 (106)
T PF13947_consen 1 KPGCPSSCG----NVSIPYPFGIGPGCGRDPGFELTCNNNTSPPKLLLSSGNYEVLSISYENGTIRVSDPISSNCYSSSS 76 (106)
T ss_pred CCCCCCccC----CEeecCCCccCCCCCCCCCcEEECCCCCCCceeEecCCcEEEEEEecCCCEEEEEeccccceecCCC
Confidence 478999999 999999999999998 89999876 33 33 4899999997 46777655 55654431
Q ss_pred -----CccCCCCCCcccc-CCceEEEECCCC
Q 005536 88 -----SLHPLFGPNYGMT-RQNSLLLQNCTT 112 (692)
Q Consensus 88 -----~~~~~~~~~f~~s-~~n~~~~~gC~~ 112 (692)
...++.+ +|.++ .+|.|+++||++
T Consensus 77 ~~~~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 77 SNSSNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred CcccccEEeecC-CceEccCCcEEEEECCCC
Confidence 1123333 77776 899999999985
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.6e-15 Score=145.88 Aligned_cols=136 Identities=18% Similarity=0.206 Sum_probs=98.9
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCch--hHHHH----------------------HHHHHHHHhCCCC--Ce
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTD--SIDQV----------------------MNEIKLLSSVSHP--NL 382 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~il~~l~H~--ni 382 (692)
.+.||+|+||+||++...+++.||||+++..... ....+ ..|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999888999999998754211 11111 3566666666543 34
Q ss_pred eeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 383 LRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 383 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
.+.+++ ...++||||++++++......... .. .....++.+++.++.++|.. .+|+||||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-CC
Confidence 555543 346899999998554321111100 11 56788999999999999983 4999999999999999 89
Q ss_pred ceEEeeecCCcc
Q 005536 463 RSKVADFGLSRL 474 (692)
Q Consensus 463 ~~kl~DFGla~~ 474 (692)
.++|+|||.+..
T Consensus 152 ~~~liDfg~a~~ 163 (187)
T cd05119 152 KVYIIDVPQAVE 163 (187)
T ss_pred cEEEEECccccc
Confidence 999999999964
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.61 E-value=5.9e-16 Score=175.77 Aligned_cols=208 Identities=25% Similarity=0.355 Sum_probs=141.9
Q ss_pred hccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEe
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~ 401 (692)
...|+.++.|..|+||.||..+... .+.+|+| +++.+. -..+ ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l----ilRn---ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL----ILRN---ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch----hhhc---cccccCCccee------------------
Confidence 4678999999999999999998654 4567773 332210 0000 22222233332
Q ss_pred CCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCC--
Q 005536 402 MPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-- 479 (692)
Q Consensus 402 ~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~-- 479 (692)
|+-.+.+... .+++.. ++.+++|||+. +|+|||+||.|.||+.-|.+|+.|||+++.+....
T Consensus 136 ---gDc~tllk~~--g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNI--GPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccC--CCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4444444432 223332 27899999995 99999999999999999999999999987632210
Q ss_pred ----------Cc--ccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 480 ----------SH--ISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 480 ----------~~--~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
.+ ....+.||+.|+|||++....|....|.|++|+|+||.+-|..||....+++-.... +..
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v------isd 273 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV------ISD 273 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh------hhh
Confidence 01 123356999999999999999999999999999999999999999877664322111 110
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCC
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRP 589 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RP 589 (692)
++. -++. ......++++++.+.|+.+|..|-
T Consensus 274 ----~i~----wpE~---dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 274 ----DIE----WPEE---DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ----hcc----cccc---CcCCCHHHHHHHHHHHHhChHhhc
Confidence 000 0011 112345788999999999999995
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.7e-14 Score=146.64 Aligned_cols=135 Identities=21% Similarity=0.262 Sum_probs=106.3
Q ss_pred ceeec-ccccEEEEEEEEeCCCEEEEEEeecCC-------------chhHHHHHHHHHHHHhCCCCCe--eeeEEEEEeC
Q 005536 329 KHRLG-TGAYGTVYAGKLHNDDWVAIKRFRYRD-------------TDSIDQVMNEIKLLSSVSHPNL--LRLLGCCIEE 392 (692)
Q Consensus 329 ~~~LG-~G~fG~Vy~g~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~il~~l~H~ni--v~l~g~~~~~ 392 (692)
...|| .||.|+||+.... +..++||+++... ......+.+|+.++.+|+|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45788 8999999999874 6679999886421 1233568899999999998875 7777775443
Q ss_pred C----eeEEEEEeCCC-CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEe
Q 005536 393 G----EPILVYEFMPN-GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVA 467 (692)
Q Consensus 393 ~----~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~ 467 (692)
. ..++|+||+++ .+|.+++... .++.. .+.+++.+|.+||+ .+|+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6898888642 34443 35689999999999 499999999999999999999999
Q ss_pred eecCCcc
Q 005536 468 DFGLSRL 474 (692)
Q Consensus 468 DFGla~~ 474 (692)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9999875
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=1.8e-15 Score=171.93 Aligned_cols=262 Identities=21% Similarity=0.290 Sum_probs=189.8
Q ss_pred hccCccceeecccccEEEEEEEEeC--CCEEEEEEeecCC--chhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEE
Q 005536 323 TSFFSEKHRLGTGAYGTVYAGKLHN--DDWVAIKRFRYRD--TDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 323 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~l 397 (692)
...|...+.||+|+|+.|-...... ...+|+|.+.... ....+....|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3456677789999999998776543 3456666665443 233444556888888887 9999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCceEEcCCC-ceEEeeecCCccC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLH-SAMNPPIYHRDIKSSNILLDYNY-RSKVADFGLSRLG 475 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH-~~~~~~iiHrDik~~NILld~~~-~~kl~DFGla~~~ 475 (692)
+.||..++++.+.+........+....-....|+..++.|+| . .++.||||||+|.+++..+ ..|++|||+|...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999998883222223555666788899999999999 5 5999999999999999999 9999999999865
Q ss_pred CC--CCCcccccCCC-CCCCCCccccccC-CCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhccCccc
Q 005536 476 MT--ESSHISTAPQG-TPGYLDPQYHQYF-HLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVD 551 (692)
Q Consensus 476 ~~--~~~~~~~~~~g-t~~Y~aPE~~~~~-~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (692)
.. ..........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++......... .
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~--------------~ 241 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY--------------S 241 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc--------------e
Confidence 44 22233345567 9999999998774 45668999999999999999999987654433211 1
Q ss_pred ccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhcccccc
Q 005536 552 EIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 609 (692)
Q Consensus 552 ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~~~~~~~~ 609 (692)
.+...........| ........++..+++..+|..|.+. +.+...+|...
T Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~l~k~l~~~~~~r~s~-------~~~~~d~~~~~ 291 (601)
T KOG0590|consen 242 SWKSNKGRFTQLPW-NSISDQAHDLLHKILKENPSNRLSI-------EELKLDNWLSS 291 (601)
T ss_pred eecccccccccCcc-ccCChhhhhcccccccCCchhcccc-------ccccccccccc
Confidence 11111000000111 1223456778889999999999994 44456666554
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=2.5e-13 Score=149.93 Aligned_cols=138 Identities=19% Similarity=0.210 Sum_probs=100.2
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCchhH----------------------------------------HHHHH
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSI----------------------------------------DQVMN 369 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 369 (692)
+.||.|++|.||+|++.+|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999875421110 02455
Q ss_pred HHHHHHhCC----CCCeeeeEEEE-EeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHH-HHHHHHhcCC
Q 005536 370 EIKLLSSVS----HPNLLRLLGCC-IEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQ-AIAYLHSAMN 443 (692)
Q Consensus 370 E~~il~~l~----H~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~-aL~yLH~~~~ 443 (692)
|...+.+++ |.+-+.+-..+ ......+|||||++|++|.+.+..... .+ .+.+++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~--- 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLR--- 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHh---
Confidence 666565552 33333333333 234567999999999999887654221 12 24567777766 4678887
Q ss_pred CCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 444 ~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.+++|+|+||.||++++++.+++.|||++..
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~ 306 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGR 306 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence 4999999999999999999999999999865
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=2.3e-13 Score=136.94 Aligned_cols=203 Identities=22% Similarity=0.304 Sum_probs=140.5
Q ss_pred HHHHHhCCCCCeeeeEEEEEeC-----CeeEEEEEeCCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005536 371 IKLLSSVSHPNLLRLLGCCIEE-----GEPILVYEFMPNGTLCQHLQRERG--SGLPWTIRITIATETAQAIAYLHSAMN 443 (692)
Q Consensus 371 ~~il~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~ia~~ia~aL~yLH~~~~ 443 (692)
..-|-++-|.|||++..++.+. .+..++.|||+.|+|.++|++.+. ..+......+|+.||..||.|||+ +.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 3445566799999999998654 357899999999999999987542 347777778999999999999998 57
Q ss_pred CCeEecCCCCCceEEcCCCceEEeeecCCccCCCC---CCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHH
Q 005536 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE---SSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEII 520 (692)
Q Consensus 444 ~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLl 520 (692)
++|+|+++..+.|++..++-+|+.----....... .........+-++|.+||+=...+.+.++|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999999998887532111110000 001112234678999999987778888999999999999998
Q ss_pred hCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005536 521 TALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAE 596 (692)
Q Consensus 521 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~ 596 (692)
-+..-...+....+. +...... .. .+....+ ++++.+|++..|..||+|++++.
T Consensus 277 ilEiq~tnseS~~~~---ee~ia~~----i~-----~len~lq----------r~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEV---EENIANV----II-----GLENGLQ----------RGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcceeeh---hhhhhhh----ee-----eccCccc----------cCcCcccccCCCCCCcchhhhhc
Confidence 875432211111000 0000000 00 0111111 35788999999999999998864
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=1.4e-11 Score=118.13 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=96.9
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCee-eeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLL-RLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv-~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
.+.|+.|.++.||+.+.. +..|++|....... ....+.+|++++..+.+.+++ +++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 457899999999999864 67899998764422 233567899999998755544 455443 3345899999999887
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAM--NPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~--~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.+.. . ....++.+++++|+.||+.. ...++|+|++|.||+++ ++.+++.|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5430 1 11345679999999999852 12369999999999999 66899999998864
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=4.3e-12 Score=138.46 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=174.8
Q ss_pred cCccceeecc--cccEEEEEEEE---eCCCEEEEEEeecCCc--hhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeE
Q 005536 325 FFSEKHRLGT--GAYGTVYAGKL---HNDDWVAIKRFRYRDT--DSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPI 396 (692)
Q Consensus 325 ~f~~~~~LG~--G~fG~Vy~g~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~ 396 (692)
.|...+.+|. |.+|.||++.. .++..+|+|+-+..-. .....=.+|+.-..+++ |+|.++....+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3455677999 99999999986 4577899998554322 22233345666666674 999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCceEEcCC-CceEEeeecC
Q 005536 397 LVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQ----AIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSKVADFGL 471 (692)
Q Consensus 397 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~----aL~yLH~~~~~~iiHrDik~~NILld~~-~~~kl~DFGl 471 (692)
+-+|++ +.+|.++.+... ..++....+.+..+... ||.++|+ +.|+|-|+||.||++..+ ...++.|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcce
Confidence 999998 578888877542 33566666666666667 9999999 599999999999999999 8999999999
Q ss_pred CccCCCCC----CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHHHhcc
Q 005536 472 SRLGMTES----SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGR 547 (692)
Q Consensus 472 a~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~ 547 (692)
...+.... ........|...|++||..++ -++.++|+|++|.+++|-.++......... . .+..++.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~--~W~~~r~ 340 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN------S--SWSQLRQ 340 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC------C--Ccccccc
Confidence 87643322 122233468889999998875 578899999999999999998655432200 0 0111111
Q ss_pred CcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 548 GCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 548 ~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+. +-+... .....++..++..+++.+|..|++.+.+.
T Consensus 341 ~~---ip~e~~--------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 341 GY---IPLEFC--------EGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred cc---Cchhhh--------cCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 11 111111 11223455588999999999999877654
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=2.7e-11 Score=135.48 Aligned_cols=144 Identities=18% Similarity=0.223 Sum_probs=95.1
Q ss_pred ccCccceeecccccEEEEEEEEeC-CCEEEEEEeecCCchh------------------------------H--------
Q 005536 324 SFFSEKHRLGTGAYGTVYAGKLHN-DDWVAIKRFRYRDTDS------------------------------I-------- 364 (692)
Q Consensus 324 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~vavK~~~~~~~~~------------------------------~-------- 364 (692)
..|+. +.||.|++|.||++++.+ |+.||||+.++.-... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 689999999999999988 9999999997542110 0
Q ss_pred --HHHHHHHHHHHhCC----CCCeeeeEEEEEe-CCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHH-HH
Q 005536 365 --DQVMNEIKLLSSVS----HPNLLRLLGCCIE-EGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQA-IA 436 (692)
Q Consensus 365 --~~~~~E~~il~~l~----H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~a-L~ 436 (692)
-+|.+|...+.+++ +.+.+.+-.++.+ ....+|||||++|+.|.+.-.-. ....+ +..++...+.. +.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d---~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTD---MKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCC---HHHHHHHHHHHHHH
Confidence 12445555555553 4444444444433 45678999999999998742211 11122 12233222221 22
Q ss_pred HHHhcCCCCeEecCCCCCceEEcCCC----ceEEeeecCCccC
Q 005536 437 YLHSAMNPPIYHRDIKSSNILLDYNY----RSKVADFGLSRLG 475 (692)
Q Consensus 437 yLH~~~~~~iiHrDik~~NILld~~~----~~kl~DFGla~~~ 475 (692)
.++. .+++|+|+||.||+++.++ .+++.|||+....
T Consensus 275 Qif~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 275 QVFR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 2333 4999999999999999888 9999999998653
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.20 E-value=3.9e-10 Score=124.34 Aligned_cols=166 Identities=16% Similarity=0.167 Sum_probs=126.0
Q ss_pred EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHH
Q 005536 345 LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIR 424 (692)
Q Consensus 345 ~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~ 424 (692)
..++.+|.|...+..+....+...+-++.|+.++||||++++....+.+..|||+|-+ --|..++.... -...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-----HHHH
Confidence 4567888888888766544556778899999999999999999999999999999998 45777776542 3445
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCCCccccccCCCC
Q 005536 425 ITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLS 504 (692)
Q Consensus 425 ~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s 504 (692)
--.+.||+.||.|||+. .+++|++|....|++++.|..||++|.+....... ........--..|..|+.+....
T Consensus 107 ~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~-~~~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGF-NAPAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccC-CcccccchhhhcccChhhcCccc--
Confidence 56678999999999976 58999999999999999999999999887542111 11111111223456676554322
Q ss_pred CccceeehhHHHHHHHhC
Q 005536 505 DKSDVYSFGVVLIEIITA 522 (692)
Q Consensus 505 ~ksDV~SfGvll~eLltg 522 (692)
-.-|.|-||++++|++.|
T Consensus 182 ~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhhHHHHHHHHhCc
Confidence 235999999999999998
No 442
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.18 E-value=1.9e-10 Score=115.30 Aligned_cols=143 Identities=23% Similarity=0.291 Sum_probs=112.2
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCc-hhHHHHHHHHHHHHhCCC--CCeeeeEEEEEeCC---eeEEEEEeC
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT-DSIDQVMNEIKLLSSVSH--PNLLRLLGCCIEEG---EPILVYEFM 402 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H--~niv~l~g~~~~~~---~~~lV~E~~ 402 (692)
.+.|+.|..+.||++...+|+.+++|....... ....++.+|+++++.+++ .++.+++.+..+.. ..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 357899999999999887768899999765422 245678899999999976 44677888776542 568999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAM---------------------------------------- 442 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~---------------------------------------- 442 (692)
++.++.+.+.. ..++...+..++.+++++|++||+..
T Consensus 83 ~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 83 DGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 99888775532 24677778888889999998888531
Q ss_pred -------------CCCeEecCCCCCceEEcC--CCceEEeeecCCcc
Q 005536 443 -------------NPPIYHRDIKSSNILLDY--NYRSKVADFGLSRL 474 (692)
Q Consensus 443 -------------~~~iiHrDik~~NILld~--~~~~kl~DFGla~~ 474 (692)
...++|+|+++.|||++. +..+.|.||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998865
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=2.8e-11 Score=132.18 Aligned_cols=258 Identities=18% Similarity=0.181 Sum_probs=183.5
Q ss_pred CCChHH-HHHhhccCccceeecccccEEEEEEEE--eCCCEEEEEEeecCCchhHHH--HHHHHHHHHhC-CCCCeeeeE
Q 005536 313 FYPYKE-IEKATSFFSEKHRLGTGAYGTVYAGKL--HNDDWVAIKRFRYRDTDSIDQ--VMNEIKLLSSV-SHPNLLRLL 386 (692)
Q Consensus 313 ~~~~~e-l~~~~~~f~~~~~LG~G~fG~Vy~g~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~il~~l-~H~niv~l~ 386 (692)
+|.-.+ ....+..|.....||.|.|+.|++... .++..+++|.+...-....++ -..|+.+...+ .|.+++...
T Consensus 253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~ 332 (524)
T KOG0601|consen 253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN 332 (524)
T ss_pred eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence 344444 334556788999999999999998763 457789999887553322222 24566666666 499999988
Q ss_pred EEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC-CceE
Q 005536 387 GCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN-YRSK 465 (692)
Q Consensus 387 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~-~~~k 465 (692)
..+...+..++--||++++++...+.- ...++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..+
T Consensus 333 ~~W~~~r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 333 SSWSQLRQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred CCccccccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhh
Confidence 888888888899999999998776622 2457888899999999999999998 599999999999999886 8899
Q ss_pred EeeecCCccCCCCCCcccccCCCCCCCC--CccccccCCCCCccceeehhHHHHHHHhCCcccCCCCCcccccHHHHHHH
Q 005536 466 VADFGLSRLGMTESSHISTAPQGTPGYL--DPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAID 543 (692)
Q Consensus 466 l~DFGla~~~~~~~~~~~~~~~gt~~Y~--aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~~~~~~~~~~~~~~~~~ 543 (692)
+.|||.+..... . .....++.++. +|+......+-.+.|+||||.-+.|.+++......... +.
T Consensus 408 ~~~~~~~t~~~~---~-~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----------~~ 473 (524)
T KOG0601|consen 408 LGDFGCWTRLAF---S-SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----------SL 473 (524)
T ss_pred ccccccccccce---e-cccccccccccccchhhccccccccccccccccccccccccCcccCccccc----------ce
Confidence 999999863111 1 11122333344 56666777888999999999999999998653321100 11
Q ss_pred HhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005536 544 RIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 602 (692)
Q Consensus 544 ~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl~~L~~i~ 602 (692)
.++++...- .+ ...+.+..++..+...++..||.+.++....+.++
T Consensus 474 ~i~~~~~p~------------~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 474 TIRSGDTPN------------LP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred eeecccccC------------CC-chHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 122221111 01 12256778899999999999999988876665544
No 444
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=6.5e-10 Score=108.53 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=98.6
Q ss_pred eeecccccEEEEEEEEeC-------CCEEEEEEeecCC------------c----------hhHHHHH----HHHHHHHh
Q 005536 330 HRLGTGAYGTVYAGKLHN-------DDWVAIKRFRYRD------------T----------DSIDQVM----NEIKLLSS 376 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-------~~~vavK~~~~~~------------~----------~~~~~~~----~E~~il~~ 376 (692)
..||.|--+.||.|...+ +..+|||..+... . ...+.+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998553 4789999986421 0 1122333 89999999
Q ss_pred CC--CCCeeeeEEEEEeCCeeEEEEEeCCCCCHHH-HHhhccCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCC
Q 005536 377 VS--HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQ-HLQRERGSGLPWTIRITIATETAQAIAYL-HSAMNPPIYHRDIK 452 (692)
Q Consensus 377 l~--H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~ia~~ia~aL~yL-H~~~~~~iiHrDik 452 (692)
+. .-++.+++++ ..-+|||||+.+..+.. .|.. ..++......+..+++.+|..| |. .+|+|+||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence 95 3577777765 45689999997654422 2221 2245556677889999999999 66 499999999
Q ss_pred CCceEEcCCCceEEeeecCCcc
Q 005536 453 SSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 453 ~~NILld~~~~~kl~DFGla~~ 474 (692)
+.|||+++ +.+.|+|||.+..
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~ 173 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVE 173 (197)
T ss_pred HHHEEEEC-CcEEEEECCCcee
Confidence 99999974 6799999998864
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.3e-09 Score=103.02 Aligned_cols=130 Identities=20% Similarity=0.290 Sum_probs=100.3
Q ss_pred eecccccEEEEEEEEeCCCEEEEEEeecCC---c-----hhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeC
Q 005536 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRD---T-----DSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFM 402 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~---~-----~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~ 402 (692)
.+++|+-+.+|.+.+.+.. +++|.=.... + -..++-.+|+.++.+++--.|.-..=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999765444 5555432221 1 12345678999999997656655555566777889999999
Q ss_pred CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 403 PNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 403 ~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
++-.|.+.+... +..++..+-.-+.-||.. +|+|+||.++||++..+. +.++||||+..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 998998888754 356778888889999995 999999999999998775 99999999975
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05 E-value=2.6e-09 Score=100.36 Aligned_cols=143 Identities=22% Similarity=0.207 Sum_probs=106.1
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEe-ecC-------CchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEE
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRF-RYR-------DTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~-~~~-------~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~ 399 (692)
....|-||+-+.|+++.+. |+...||.- .+. ..-..++..+|+++|.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4568899999999999874 555555543 221 1123456788999999987656655555566666678999
Q ss_pred EeCCC-CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC---ceEEeeecCCcc
Q 005536 400 EFMPN-GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY---RSKVADFGLSRL 474 (692)
Q Consensus 400 E~~~~-gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~---~~kl~DFGla~~ 474 (692)
||+++ .++.+++...-...........++..+-+.+.-||. .+|+|+||..+||+|..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99966 488888887544333333447889999999999999 5999999999999996554 458999999864
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.93 E-value=2.3e-08 Score=107.25 Aligned_cols=168 Identities=15% Similarity=0.254 Sum_probs=126.7
Q ss_pred cEEEEEEE-EeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEe----CCeeEEEEEeCCC-CCHHHH
Q 005536 337 YGTVYAGK-LHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIE----EGEPILVYEFMPN-GTLCQH 410 (692)
Q Consensus 337 fG~Vy~g~-~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~-gsL~~~ 410 (692)
-.+.||+. ..||..|++|+++.......-.-..-++.++++.|.|+|++..++.. +..++|||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 45789987 45789999999943322222223356888999999999999998873 3468999999986 578775
Q ss_pred Hhhc-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCC
Q 005536 411 LQRE-------------RGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT 477 (692)
Q Consensus 411 l~~~-------------~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~ 477 (692)
-... .+..+++...|.++.|+..||.++|+. |+.-+-|.+++||++.+.+++|+..|...+...
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4421 123478899999999999999999995 999999999999999999999999988765433
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcc
Q 005536 478 ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKV 525 (692)
Q Consensus 478 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p 525 (692)
+.. |-+.. -.+-|.=.||.+|+.|.||...
T Consensus 446 d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 321 11111 1256888899999999999654
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.90 E-value=4.1e-08 Score=101.19 Aligned_cols=133 Identities=13% Similarity=0.079 Sum_probs=97.8
Q ss_pred EEEEEEEEeCCCEEEEEEeecCCch-hH----------HHHHHHHHHHHhCCC--CCeeeeEEEEEe-----CCeeEEEE
Q 005536 338 GTVYAGKLHNDDWVAIKRFRYRDTD-SI----------DQVMNEIKLLSSVSH--PNLLRLLGCCIE-----EGEPILVY 399 (692)
Q Consensus 338 G~Vy~g~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~il~~l~H--~niv~l~g~~~~-----~~~~~lV~ 399 (692)
..|++..+ +|+.|.||+....... .. ..+.+|...+.++.. -..+.++++... ...-+||+
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 34666655 6778999987543211 11 137799999988853 344555666543 23578999
Q ss_pred EeCCCC-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC-------CCceEEeeecC
Q 005536 400 EFMPNG-TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY-------NYRSKVADFGL 471 (692)
Q Consensus 400 E~~~~g-sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~-------~~~~kl~DFGl 471 (692)
|++++- +|.+++........+...+..++.+++..++-||.. +|+|+|++++|||++. +..+.|+||+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 999876 899988643223456667789999999999999995 9999999999999985 56899999998
Q ss_pred Ccc
Q 005536 472 SRL 474 (692)
Q Consensus 472 a~~ 474 (692)
++.
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 853
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=3.8e-10 Score=129.26 Aligned_cols=249 Identities=19% Similarity=0.229 Sum_probs=165.9
Q ss_pred hhccCccceeecccccEEEEEEEEe-CCCEEEEEEeecCC---chhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLH-NDDWVAIKRFRYRD---TDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~l 397 (692)
..+.|...+-+-+|.++.++..+-. .+...++|...... ..+.+....+-.++-..+||-++....-+.-.....|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3455666677888999999876522 23333444333221 1222223333333333445666665555555678899
Q ss_pred EEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCc-cCC
Q 005536 398 VYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGM 476 (692)
Q Consensus 398 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~-~~~ 476 (692)
+++|..+++|...|+... .++..........+..+++|||.. .+.|+|++|.|+|...++..+++|||... ...
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999998753 244444445556778899999994 59999999999999999999999998332 110
Q ss_pred C----CC-------------------------CcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCcccC
Q 005536 477 T----ES-------------------------SHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVD 527 (692)
Q Consensus 477 ~----~~-------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~~ 527 (692)
. +. ........||+.|++||...+......+|.|++|++++|.++|..||+
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 011233468999999999999999999999999999999999999998
Q ss_pred CCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 005536 528 FSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMM 592 (692)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~ 592 (692)
...+... .+.+..+.... ...+.....+..+++.+.+..+|.+|-.|.
T Consensus 1037 a~tpq~~-------f~ni~~~~~~~----------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQI-------FENILNRDIPW----------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhh-------hhccccCCCCC----------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 6554221 12222211111 111223345677899999999999997765
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.87 E-value=1.5e-08 Score=98.56 Aligned_cols=124 Identities=20% Similarity=0.231 Sum_probs=83.2
Q ss_pred EEEEEEEeCCCEEEEEEeecCC-------------ch-------------hHHHHHHHHHHHHhCCCC--CeeeeEEEEE
Q 005536 339 TVYAGKLHNDDWVAIKRFRYRD-------------TD-------------SIDQVMNEIKLLSSVSHP--NLLRLLGCCI 390 (692)
Q Consensus 339 ~Vy~g~~~~~~~vavK~~~~~~-------------~~-------------~~~~~~~E~~il~~l~H~--niv~l~g~~~ 390 (692)
-||.|...++..+|||..+... .. ......+|.+.|.++..- ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899999899999999986431 00 123467899999999865 567776552
Q ss_pred eCCeeEEEEEeCC--CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCceEEcCCCceEEe
Q 005536 391 EEGEPILVYEFMP--NGTLCQHLQRERGSGLPWTIRITIATETAQAIAYL-HSAMNPPIYHRDIKSSNILLDYNYRSKVA 467 (692)
Q Consensus 391 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yL-H~~~~~~iiHrDik~~NILld~~~~~kl~ 467 (692)
.-.|||||++ +..+..+.... ++......++.+++..+..+ |. .+|+|+||.+.|||++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEE
Confidence 3479999998 54554433221 22345567788888866664 56 499999999999999988 99999
Q ss_pred eecCCcc
Q 005536 468 DFGLSRL 474 (692)
Q Consensus 468 DFGla~~ 474 (692)
|||.+..
T Consensus 149 Df~qav~ 155 (188)
T PF01163_consen 149 DFGQAVD 155 (188)
T ss_dssp -GTTEEE
T ss_pred ecCccee
Confidence 9998864
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.82 E-value=1.1e-07 Score=99.63 Aligned_cols=266 Identities=15% Similarity=0.152 Sum_probs=163.0
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhC-CCCCeeeeEEEE-------EeCCeeEEEE
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSV-SHPNLLRLLGCC-------IEEGEPILVY 399 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~g~~-------~~~~~~~lV~ 399 (692)
..+.||+|+.+.+|.-- .-..-+.|++.........+. +..|... .||-+-.-+.|= ......-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 46689999999999532 111234566654433332222 2223333 455433322221 1122355677
Q ss_pred EeCCCCC-HHHHHhh----ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 400 EFMPNGT-LCQHLQR----ERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 400 E~~~~gs-L~~~l~~----~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
..+++.- +.+++.. ..-....|...++.+..+|.+.+-||.+ |..-+|+.++|+|+.+++.+.|.|=..-.+
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 7776542 2233321 1123488999999999999999999996 999999999999999999999998654433
Q ss_pred CCCCCCcccccCCCCCCCCCccccc-----cCCCCCccceeehhHHHHHHHhC-CcccCCCCCcccccHHHHHHHHhccC
Q 005536 475 GMTESSHISTAPQGTPGYLDPQYHQ-----YFHLSDKSDVYSFGVVLIEIITA-LKVVDFSRPHSEVNLAALAIDRIGRG 548 (692)
Q Consensus 475 ~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDV~SfGvll~eLltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 548 (692)
. .........+|...|.+||... +..-+..+|-|.|||++++|+.| +.||..-....... .-....|..|
T Consensus 167 ~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap--~p~E~~Ia~g 242 (637)
T COG4248 167 N--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAP--NPLETDIAHG 242 (637)
T ss_pred c--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCC--Ccchhhhhcc
Confidence 2 3334455678999999999743 44567789999999999999986 88885321111000 0001122233
Q ss_pred ccccccccc--CCcCCCccCHHH-HHHHHHHHHHhccc--CCCCCCCHHHHHHHHHhhhhcc
Q 005536 549 CVDEIIDPY--LEPHRDAWTLSS-IHNVAELAFRCLAF--HRDMRPTMMEVAEELEHIRVSS 605 (692)
Q Consensus 549 ~~~ei~d~~--l~~~~~~~~~~~-~~~l~~L~~~Cl~~--~p~~RPsm~eVl~~L~~i~~~~ 605 (692)
....--|.. +.+.-..++... ...+..|..+|+.. ++.-||+++-++..|..++...
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 222222211 111112233332 34677788888864 3678999999999998887653
No 452
>PF08488 WAK: Wall-associated kinase; InterPro: IPR013695 This domain is found together with the eukaryotic protein kinase domain IPR000719 from INTERPRO in plant wall-associated kinases (WAKs) and related proteins. WAKs are serine-threonine kinases which might be involved in signalling to the cytoplasm and are required for cell expansion []. ; GO: 0004674 protein serine/threonine kinase activity, 0016021 integral to membrane
Probab=98.62 E-value=5.4e-08 Score=84.57 Aligned_cols=64 Identities=16% Similarity=0.278 Sum_probs=43.9
Q ss_pred CCCCCCCCCcceeecccCCCC-C---ccccccc--ccccCccceEEEeeeccCCCCC-----CCCccceeEEEEEecCC
Q 005536 131 KTCGVGSDNITCFSWPYNENK-S---ASFMSFN--DLSRTGCNYLFSSLAFNSGGNS-----AGSLEFQLLELGWGLNG 198 (692)
Q Consensus 131 ~~C~~~~~g~~Cc~~~~~~~~-~---~~~~~~~--~~~~~~C~~~~~~~~~~~~~~~-----~~~~~~~~~~L~W~i~~ 198 (692)
..| +|++|||+.||+++ + ..+...+ .....+|++||++...++..+. ....+++||+|||.|+.
T Consensus 2 ~~C----sG~~CCQt~iP~~~~qv~~~~i~~~~~~~~~~~~Ck~AFL~d~~~~~~n~t~p~~~~~~~y~pv~L~W~i~t 76 (103)
T PF08488_consen 2 SSC----SGIGCCQTSIPSGLLQVFNVTIESTDGNNQTSNGCKVAFLVDEDWFSSNITDPEDFHAMGYVPVVLDWFIDT 76 (103)
T ss_pred Ccc----CCcceeccCCCCCCceEEEEEeEecCCCcccCCCceEEEEeccccccccCCChHHhccCCeeEEEEEEEEec
Confidence 579 79999999999863 2 2222222 2345799999999876653321 12456799999999964
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.57 E-value=3.4e-08 Score=109.68 Aligned_cols=149 Identities=19% Similarity=0.236 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCC--------CCcccccCCCCCCCCCcccccc
Q 005536 429 TETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE--------SSHISTAPQGTPGYLDPQYHQY 500 (692)
Q Consensus 429 ~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~--------~~~~~~~~~gt~~Y~aPE~~~~ 500 (692)
.+++.||.|+|.. .++||++|.|++|.++.++..||+.|+.+...... +.....-.+-...|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3556999999997 79999999999999999999999999987542221 1111122345678999999999
Q ss_pred CCCCCccceeehhHHHHHHHhCCcc-cCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHH
Q 005536 501 FHLSDKSDVYSFGVVLIEIITALKV-VDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFR 579 (692)
Q Consensus 501 ~~~s~ksDV~SfGvll~eLltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~ 579 (692)
...+.++|+||+|+++|.+..|.++ +......... ..... . .+. ....++.+.+.++.+=+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-----~~~~~-~------~~~----~~~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-----SFSRN-L------LNA----GAFGYSNNLPSELRESLKK 247 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchh-----hhhhc-c------ccc----ccccccccCcHHHHHHHHH
Confidence 8899999999999999999954443 3322111100 00000 0 000 0111223456788888999
Q ss_pred hcccCCCCCCCHHHHH
Q 005536 580 CLAFHRDMRPTMMEVA 595 (692)
Q Consensus 580 Cl~~~p~~RPsm~eVl 595 (692)
++..++..||++.++.
T Consensus 248 ~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLL 263 (700)
T ss_pred HhcCCcccCcchhhhh
Confidence 9999999999877765
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.57 E-value=6.8e-07 Score=88.91 Aligned_cols=106 Identities=26% Similarity=0.271 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhCC--CCCeeeeEEEEEeCC----eeEEEEEeCCCC-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Q 005536 364 IDQVMNEIKLLSSVS--HPNLLRLLGCCIEEG----EPILVYEFMPNG-TLCQHLQRERGSGLPWTIRITIATETAQAIA 436 (692)
Q Consensus 364 ~~~~~~E~~il~~l~--H~niv~l~g~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~ 436 (692)
...+.+|...+..+. .-.+++.+++..... ..+||+|++++. +|.+++..... ++...+..++.+++..++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 446788888888885 445667777766532 458999999874 79998876422 566677899999999999
Q ss_pred HHHhcCCCCeEecCCCCCceEEcCCC---ceEEeeecCCcc
Q 005536 437 YLHSAMNPPIYHRDIKSSNILLDYNY---RSKVADFGLSRL 474 (692)
Q Consensus 437 yLH~~~~~~iiHrDik~~NILld~~~---~~kl~DFGla~~ 474 (692)
-||+. +|+|+|+++.|||++.+. .+.++||+.++.
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99994 999999999999999887 899999998775
No 455
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.53 E-value=5.3e-07 Score=90.43 Aligned_cols=134 Identities=19% Similarity=0.139 Sum_probs=95.1
Q ss_pred CccceeecccccEEEEEEEEeCCCEEEEEEeecCCc----------------------hhHHHHHHHHHHHHhCCCC--C
Q 005536 326 FSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDT----------------------DSIDQVMNEIKLLSSVSHP--N 381 (692)
Q Consensus 326 f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~il~~l~H~--n 381 (692)
.....+||-|.-+.||.|...+|.++|||.-+.... -......+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 445678999999999999999999999997653210 0123457899999999755 7
Q ss_pred eeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCC
Q 005536 382 LLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYN 461 (692)
Q Consensus 382 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~ 461 (692)
+.+.+++ +.-.+||||+++--|...- ++....-.|+..|+.-+.-+-. .||||+|+++-|||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecC
Confidence 8887765 3457999999886554321 1122222333344443333333 399999999999999999
Q ss_pred CceEEeeecCCc
Q 005536 462 YRSKVADFGLSR 473 (692)
Q Consensus 462 ~~~kl~DFGla~ 473 (692)
+.+.++||--+.
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 999999997654
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.51 E-value=1.3e-06 Score=85.78 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=105.0
Q ss_pred ecccccEEEEEEEEeCCCEEEEEEeecCC------chhHHHHHHHHHHHHhCCC--CCeeeeEEEEEe----CCeeEEEE
Q 005536 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRD------TDSIDQVMNEIKLLSSVSH--PNLLRLLGCCIE----EGEPILVY 399 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~~~~vavK~~~~~~------~~~~~~~~~E~~il~~l~H--~niv~l~g~~~~----~~~~~lV~ 399 (692)
-|.||-+.|+.-.+. |..+-+|+-...- +-....|.+|+..|.+|.. -.+.+++.+... ....+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 467899999987664 4468888865221 3356789999999999963 335555532222 12468999
Q ss_pred EeCCC-CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCc--eEEeeecCCcc
Q 005536 400 EFMPN-GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYR--SKVADFGLSRL 474 (692)
Q Consensus 400 E~~~~-gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~--~kl~DFGla~~ 474 (692)
|-+++ -+|.+++....-.+.+...+..+..+++..|+-||+. ++.|+|+-+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98854 5898888664334567788889999999999999995 9999999999999986666 99999987764
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.47 E-value=9.5e-07 Score=98.56 Aligned_cols=157 Identities=20% Similarity=0.248 Sum_probs=102.5
Q ss_pred CCCCCChHHHHHh------------hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchh--------------
Q 005536 310 SVPFYPYKEIEKA------------TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS-------------- 363 (692)
Q Consensus 310 ~~~~~~~~el~~~------------~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~-------------- 363 (692)
.++.+++++.++. -..|+. +.|+.++-|.||+|++++|+.||||+.++.-...
T Consensus 100 ~vpp~~~~~~~~iie~eLG~~iee~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~ 178 (517)
T COG0661 100 RVPPFPFEEAERIIEEELGRPIEELFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARL 178 (517)
T ss_pred CCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHH
Confidence 4566777655432 234443 4799999999999999999999999987542111
Q ss_pred ----------------HH----------HHHHHHHHHHhCC-----CCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHh
Q 005536 364 ----------------ID----------QVMNEIKLLSSVS-----HPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQ 412 (692)
Q Consensus 364 ----------------~~----------~~~~E~~il~~l~-----H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~ 412 (692)
.+ ++.+|..-+.+++ .+++.-.-=++.-.....|+|||++|-.+.+...
T Consensus 179 ~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~ 258 (517)
T COG0661 179 IKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAA 258 (517)
T ss_pred HHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHH
Confidence 11 1344555555542 2333332233334567899999999988888743
Q ss_pred hccCCCCCHHHHHHHHHHHHHH-HHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 413 RERGSGLPWTIRITIATETAQA-IAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 413 ~~~~~~l~~~~~~~ia~~ia~a-L~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
... ..++. ..|+..++++ +..+-. .+++|.|.+|.||+++.++++.+.|||+...
T Consensus 259 l~~-~g~d~---k~ia~~~~~~f~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 259 LKS-AGIDR---KELAELLVRAFLRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred HHh-cCCCH---HHHHHHHHHHHHHHHHh---cCccccCCCccceEEecCCcEEEEcCcceec
Confidence 322 33553 3344444433 222222 3899999999999999999999999999764
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.36 E-value=6.4e-06 Score=83.06 Aligned_cols=139 Identities=14% Similarity=0.160 Sum_probs=86.8
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC--CeeeeEEEEEeCCeeEEEEEeCCCCC-
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP--NLLRLLGCCIEEGEPILVYEFMPNGT- 406 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gs- 406 (692)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..- .+.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57899999999983 24457788876432 334568899999998643 35777888877778889999998863
Q ss_pred HHHH---------------------HhhccCCCCCHHHHHH-HHH----------HHH-HHHHHHHhc-CCCCeEecCCC
Q 005536 407 LCQH---------------------LQRERGSGLPWTIRIT-IAT----------ETA-QAIAYLHSA-MNPPIYHRDIK 452 (692)
Q Consensus 407 L~~~---------------------l~~~~~~~l~~~~~~~-ia~----------~ia-~aL~yLH~~-~~~~iiHrDik 452 (692)
+... ||.......+...+.. +.. .+. ....+|... ..+.++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 2111 1111001111111100 000 011 112233222 12467899999
Q ss_pred CCceEEcCCCceEEeeecCCcc
Q 005536 453 SSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 453 ~~NILld~~~~~kl~DFGla~~ 474 (692)
|.||++++++ +.|.||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999998764
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.19 E-value=1.8e-05 Score=80.73 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=86.9
Q ss_pred eeccccc-EEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC-CCCeeeeEEEEEeCCeeEEEEEeCCCCCHH
Q 005536 331 RLGTGAY-GTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS-HPNLLRLLGCCIEEGEPILVYEFMPNGTLC 408 (692)
Q Consensus 331 ~LG~G~f-G~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~ 408 (692)
.|-.|.. ..||+.... +..++||+..... ..+..+|+++++.+. +--+.+++++....+..++|||+++|.+|.
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 3445555 788998754 4678888876432 345678999988884 455678888877767789999999987776
Q ss_pred HHH-------------------hhccC--CCCC--HHHHHHHHH--------------------HHHHHHHHHHhc----
Q 005536 409 QHL-------------------QRERG--SGLP--WTIRITIAT--------------------ETAQAIAYLHSA---- 441 (692)
Q Consensus 409 ~~l-------------------~~~~~--~~l~--~~~~~~ia~--------------------~ia~aL~yLH~~---- 441 (692)
+.. |.... .+.. +..++.... .+...+..|-..
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 432 11100 0111 001110000 011122222111
Q ss_pred CCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 442 MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 442 ~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
..+.++|+|+.|.|||++++..+.|.||+.+..
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 124589999999999999988889999997753
No 460
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.19 E-value=1.3e-05 Score=78.93 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=92.9
Q ss_pred hhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHH---------HHHHHHHHhCCC---CCeeeeEEEE
Q 005536 322 ATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQV---------MNEIKLLSSVSH---PNLLRLLGCC 389 (692)
Q Consensus 322 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~il~~l~H---~niv~l~g~~ 389 (692)
..++|...+.+-......|.+-.. ++..+++|..+.......+.| .+++..+.+++. .....++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 456777777887777777776655 567899999876654433332 234444444432 2233333322
Q ss_pred E-----eCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCce
Q 005536 390 I-----EEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRS 464 (692)
Q Consensus 390 ~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~ 464 (692)
. -....+|+|||++|..|.++.. ++. .++..+++++.-||+. |++|+|..|.|+++++++ +
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-E
Confidence 2 1235578999999988866542 222 3556777889999996 999999999999998655 9
Q ss_pred EEeeecCCcc
Q 005536 465 KVADFGLSRL 474 (692)
Q Consensus 465 kl~DFGla~~ 474 (692)
++.||+..+.
T Consensus 174 ~iID~~~k~~ 183 (229)
T PF06176_consen 174 RIIDTQGKRM 183 (229)
T ss_pred EEEECccccc
Confidence 9999987653
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.18 E-value=1.4e-05 Score=80.32 Aligned_cols=143 Identities=22% Similarity=0.288 Sum_probs=86.9
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC--CeeeeEEEEEeC---CeeEEEEEeCC
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP--NLLRLLGCCIEE---GEPILVYEFMP 403 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~--niv~l~g~~~~~---~~~~lV~E~~~ 403 (692)
.+.|+.|..+.||+....+ ..+++|..... .....+.+|..++..+... .+.+++...... ...+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4679999999999998877 68999997543 4567788899998888533 456777755333 35689999999
Q ss_pred CCCHHH----------------HH---hhcc--CCCCCHHHH---------HHH------------HHHHHH-HHHHHHh
Q 005536 404 NGTLCQ----------------HL---QRER--GSGLPWTIR---------ITI------------ATETAQ-AIAYLHS 440 (692)
Q Consensus 404 ~gsL~~----------------~l---~~~~--~~~l~~~~~---------~~i------------a~~ia~-aL~yLH~ 440 (692)
+..+.. .+ +... ...+.+... ... ...+.. .++.+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 887776 11 1110 111111110 000 112222 3444443
Q ss_pred c----CCCCeEecCCCCCceEEc-CCCceEEeeecCCcc
Q 005536 441 A----MNPPIYHRDIKSSNILLD-YNYRSKVADFGLSRL 474 (692)
Q Consensus 441 ~----~~~~iiHrDik~~NILld-~~~~~kl~DFGla~~ 474 (692)
. ....++|+|+.+.|||++ +++.+-|.||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2 235799999999999999 666668999988754
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.14 E-value=1.6e-05 Score=88.53 Aligned_cols=159 Identities=19% Similarity=0.230 Sum_probs=100.8
Q ss_pred CCCCCChHHHHHh------------hccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchh--------------
Q 005536 310 SVPFYPYKEIEKA------------TSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS-------------- 363 (692)
Q Consensus 310 ~~~~~~~~el~~~------------~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~-------------- 363 (692)
..|.+|++|+.++ -..|+. +.||.-+.|.||++++++|+.||||+-++.-+..
T Consensus 136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~ 214 (538)
T KOG1235|consen 136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKV 214 (538)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHhcCc-chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHH
Confidence 4566777776443 234443 4799999999999999999999999976542111
Q ss_pred -------------HH----------HHHHHHHHHHhC----CCCC---eeeeEEEEE-eCCeeEEEEEeCCCCCHHHHHh
Q 005536 364 -------------ID----------QVMNEIKLLSSV----SHPN---LLRLLGCCI-EEGEPILVYEFMPNGTLCQHLQ 412 (692)
Q Consensus 364 -------------~~----------~~~~E~~il~~l----~H~n---iv~l~g~~~-~~~~~~lV~E~~~~gsL~~~l~ 412 (692)
.+ +|.+|.+-..+. .|-+ -|.+=.++. -.....|+||||+|..+.|.-.
T Consensus 215 l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~ 294 (538)
T KOG1235|consen 215 LQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDA 294 (538)
T ss_pred HHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHH
Confidence 01 244555544433 3555 111222222 2356799999999987765432
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcC----CCceEEeeecCCccC
Q 005536 413 RERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDY----NYRSKVADFGLSRLG 475 (692)
Q Consensus 413 ~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~----~~~~kl~DFGla~~~ 475 (692)
-. ...++.. .|+..+.++ |++.....|++|.|-+|.||+++. ++++.+-|||+....
T Consensus 295 i~-~~gi~~~---~i~~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 295 ID-KRGISPH---DILNKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HH-HcCCCHH---HHHHHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 21 2235544 344344333 222222348999999999999983 678999999998653
No 463
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.13 E-value=2e-05 Score=78.46 Aligned_cols=151 Identities=17% Similarity=0.203 Sum_probs=102.1
Q ss_pred CChHHHHHhhccCcccee---ecccccEEEEEEEEeCCCEEEEEEeecCCchh------------------------HHH
Q 005536 314 YPYKEIEKATSFFSEKHR---LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDS------------------------IDQ 366 (692)
Q Consensus 314 ~~~~el~~~~~~f~~~~~---LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~------------------------~~~ 366 (692)
.+.+.+..+.++...... |.+|.-+.||+|...++..+|||+++...... ...
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 345566666665555554 55677788999988889999999997542110 112
Q ss_pred HHHHHHHHHhCC--CCCeeeeEEEEEeCCeeEEEEEeCCCCCH-HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005536 367 VMNEIKLLSSVS--HPNLLRLLGCCIEEGEPILVYEFMPNGTL-CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMN 443 (692)
Q Consensus 367 ~~~E~~il~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~ 443 (692)
..+|+.-|.++. +-.+.+.+++. .-.|||||+....+ .-.|. .-++.......+..++++.+.-|-..
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~-- 185 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKE-- 185 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHh--
Confidence 356888888874 55666666654 34799999954311 11111 11233334666777777777777663
Q ss_pred CCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 444 ~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.+++|+||+.=|||+. ++.+.|+|||-|..
T Consensus 186 a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~ 215 (268)
T COG1718 186 AGLVHGDLSEYNILVH-DGEPYIIDVSQAVT 215 (268)
T ss_pred cCcccccchhhheEEE-CCeEEEEECccccc
Confidence 4999999999999999 88999999998864
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.05 E-value=7.4e-07 Score=98.08 Aligned_cols=192 Identities=20% Similarity=0.152 Sum_probs=133.4
Q ss_pred HHHhhccCccceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCC-eeeeEEEEEeCCeeEE
Q 005536 319 IEKATSFFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPN-LLRLLGCCIEEGEPIL 397 (692)
Q Consensus 319 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n-iv~l~g~~~~~~~~~l 397 (692)
++..++-+...+.+++++++++||.+-.-.+...++.+... ....-++++|.+++||| .+..++-+..++..++
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 33444444555668999999999987433333334444322 34456899999999999 7777777777888999
Q ss_pred EEEeCCCC-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCC
Q 005536 398 VYEFMPNG-TLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGM 476 (692)
Q Consensus 398 V~E~~~~g-sL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~ 476 (692)
+++++..+ +-..-.... .-.+...+...+...-+++|+|||+. .=+|+| ||+..+ ...|..||+.+....
T Consensus 312 ~~~i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~ 382 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLT 382 (829)
T ss_pred hhhhhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccC
Confidence 99999776 211111100 01133334445666777899999984 458998 777766 688999999887533
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCccceeehhHHHHHHHhCCccc
Q 005536 477 TESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVV 526 (692)
Q Consensus 477 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDV~SfGvll~eLltg~~p~ 526 (692)
... ......+|+.++|||+.+...+..+-|+|++|+--.++--|-.|-
T Consensus 383 ~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 383 RTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 222 345567999999999999999999999999998777777665554
No 465
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.03 E-value=2.1e-05 Score=76.88 Aligned_cols=103 Identities=23% Similarity=0.274 Sum_probs=82.0
Q ss_pred HHHHHHHHhCCC-CCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005536 368 MNEIKLLSSVSH-PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQR-ERGSGLPWTIRITIATETAQAIAYLHSAMNPP 445 (692)
Q Consensus 368 ~~E~~il~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~ 445 (692)
.+|.-++..+.+ +++++++|.|- .++|.||...+++...-.. ..-..-+|..|.+||.++++.+.+|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 358888999976 69999999993 3789999987765421000 00123689999999999999999999865556
Q ss_pred eEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 446 IYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 446 iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
+.-.|++++|+-+++++++|+.|......
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 88899999999999999999999987653
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.00 E-value=0.00012 Score=71.97 Aligned_cols=129 Identities=22% Similarity=0.253 Sum_probs=93.1
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCC----------------chhHHHHHHHHHHHHhCC------CCCeeee
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD----------------TDSIDQVMNEIKLLSSVS------HPNLLRL 385 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~il~~l~------H~niv~l 385 (692)
....||+|+.-.||. ++++....||+.+... ....+++.+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 456799999999996 5566778899887654 223566777777666665 8899999
Q ss_pred EEEEEeCCeeEEEEEeCCC------CCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEc
Q 005536 386 LGCCIEEGEPILVYEFMPN------GTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLD 459 (692)
Q Consensus 386 ~g~~~~~~~~~lV~E~~~~------gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld 459 (692)
+|+..++..+-+|+|.+.+ -||.+++... .++. . +...+-+-..||-+. .|+.+|++|.||++.
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~---~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-E---LRQALDEFKRYLLDH---HIVIRDLNPHNIVVQ 152 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-H---HHHHHHHHHHHHHHc---CCeecCCCcccEEEE
Confidence 9999999999999999753 3688888543 2554 2 233333445566663 899999999999995
Q ss_pred CCC----ceEEee
Q 005536 460 YNY----RSKVAD 468 (692)
Q Consensus 460 ~~~----~~kl~D 468 (692)
... .+.|.|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 432 466666
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=98.00 E-value=6.5e-05 Score=90.19 Aligned_cols=147 Identities=17% Similarity=0.295 Sum_probs=92.9
Q ss_pred ceeecccccEEEEEEEEeCC---CEEEEEEeecCC-chhHHHHHHHHHHHHhCC-CCCe--eeeEEEEEeC---CeeEEE
Q 005536 329 KHRLGTGAYGTVYAGKLHND---DWVAIKRFRYRD-TDSIDQVMNEIKLLSSVS-HPNL--LRLLGCCIEE---GEPILV 398 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-H~ni--v~l~g~~~~~---~~~~lV 398 (692)
.+.|+.|.+..+|+....++ ..+++|+..... ......+.+|+++++.+. |.++ .+++++|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 56789999999999876654 367777765432 123457889999999995 6655 7888887664 468999
Q ss_pred EEeCCCCCHHH--------------------H---HhhccC---------CCCCHH--HHHHHH---------------H
Q 005536 399 YEFMPNGTLCQ--------------------H---LQRERG---------SGLPWT--IRITIA---------------T 429 (692)
Q Consensus 399 ~E~~~~gsL~~--------------------~---l~~~~~---------~~l~~~--~~~~ia---------------~ 429 (692)
|||+++..+.+ . ||.... .+..+. +..++. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99998754321 1 121110 011111 111110 1
Q ss_pred HHHHHHHHHHhcCC--------CCeEecCCCCCceEEcCC-Cc-eEEeeecCCccC
Q 005536 430 ETAQAIAYLHSAMN--------PPIYHRDIKSSNILLDYN-YR-SKVADFGLSRLG 475 (692)
Q Consensus 430 ~ia~aL~yLH~~~~--------~~iiHrDik~~NILld~~-~~-~kl~DFGla~~~ 475 (692)
.+...+.+|..... +.++|+|+++.|||++.+ .. .-|.||.++...
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 23344667754321 349999999999999853 33 579999998663
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.82 E-value=0.00017 Score=73.14 Aligned_cols=139 Identities=20% Similarity=0.214 Sum_probs=78.4
Q ss_pred eeecccccE-EEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC---CeeeeEEEEEeC---CeeEEEEEeC
Q 005536 330 HRLGTGAYG-TVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP---NLLRLLGCCIEE---GEPILVYEFM 402 (692)
Q Consensus 330 ~~LG~G~fG-~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~---niv~l~g~~~~~---~~~~lV~E~~ 402 (692)
+.|+.|+.. .||+. +..+++|..+. .....++.+|.+++..+... .+.++++..... ...+++||++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 467777776 58874 23477776543 22345788999999888532 345555544332 2458899999
Q ss_pred CCCCHHHH------------------HhhccCCC--C-------------CHHHHH--HHH-------HHHHH-HHHHHH
Q 005536 403 PNGTLCQH------------------LQRERGSG--L-------------PWTIRI--TIA-------TETAQ-AIAYLH 439 (692)
Q Consensus 403 ~~gsL~~~------------------l~~~~~~~--l-------------~~~~~~--~ia-------~~ia~-aL~yLH 439 (692)
+|.++.+. ||...... . .|.... .+. .+.+. .++.++
T Consensus 77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (235)
T cd05155 77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL 156 (235)
T ss_pred cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence 98766321 11110000 0 011110 000 01111 111111
Q ss_pred hc---CCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 440 SA---MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 440 ~~---~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
.. ..+.++|+|+.+.|||++++...-|.||+.+..
T Consensus 157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 11 124589999999999999876677999998754
No 469
>PRK10593 hypothetical protein; Provisional
Probab=97.81 E-value=0.00039 Score=73.23 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=58.0
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCC---CCeeeeEEEEEe---CCeeEEEEEe
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH---PNLLRLLGCCIE---EGEPILVYEF 401 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H---~niv~l~g~~~~---~~~~~lV~E~ 401 (692)
..+.||.|..+.||+-...+++ +++|..+. ......|.+|.+.|+.|.. -.+.++++++.. .+..+||||+
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 3567999999999998765564 66677432 1133578899999999853 478899988764 3668999999
Q ss_pred CCCCCH
Q 005536 402 MPNGTL 407 (692)
Q Consensus 402 ~~~gsL 407 (692)
++++++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998764
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.68 E-value=0.00044 Score=69.99 Aligned_cols=141 Identities=18% Similarity=0.240 Sum_probs=81.4
Q ss_pred ceeecccccEEEEEEEEeC--CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCC-eeeeEEEEEeCCeeEEEEEeCCCC
Q 005536 329 KHRLGTGAYGTVYAGKLHN--DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPN-LLRLLGCCIEEGEPILVYEFMPNG 405 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~--~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n-iv~l~g~~~~~~~~~lV~E~~~~g 405 (692)
.+.|..|-...+|+....+ +..|++|........ ...-.+|+.+++.+...+ .+++++... -.+||||+++.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence 3567778888999987664 578889977543221 122347888888885333 444544332 24899999887
Q ss_pred CHHHH-----------------HhhccCC---------CC-CHHHHHHHHH----------------------HHHHHHH
Q 005536 406 TLCQH-----------------LQRERGS---------GL-PWTIRITIAT----------------------ETAQAIA 436 (692)
Q Consensus 406 sL~~~-----------------l~~~~~~---------~l-~~~~~~~ia~----------------------~ia~aL~ 436 (692)
++... +|..... .. .|..+..+.. .+...+.
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 65311 1111100 11 1222111111 1111112
Q ss_pred HH----Hhc-CCCCeEecCCCCCceEEcC-CCceEEeeecCCcc
Q 005536 437 YL----HSA-MNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRL 474 (692)
Q Consensus 437 yL----H~~-~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~ 474 (692)
.| ... ....++|+|+.+.|||+++ +..+.|.||..|..
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 22 111 1246999999999999998 57899999987753
No 471
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.63 E-value=0.0007 Score=66.16 Aligned_cols=125 Identities=23% Similarity=0.338 Sum_probs=90.9
Q ss_pred ccCccceeeccccc-EEEEEEEEeCCCEEEEEEeecC---Cc------------------hhHHHHHHHHHHHHhCC---
Q 005536 324 SFFSEKHRLGTGAY-GTVYAGKLHNDDWVAIKRFRYR---DT------------------DSIDQVMNEIKLLSSVS--- 378 (692)
Q Consensus 324 ~~f~~~~~LG~G~f-G~Vy~g~~~~~~~vavK~~~~~---~~------------------~~~~~~~~E~~il~~l~--- 378 (692)
..++..+.||.|.. |.|||.++ +|+.+|+|.++.- .. ...+-|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888999999999 99999988 5668999994321 00 11235788998888885
Q ss_pred CCCe--eeeEEEEEeCC------------------eeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 005536 379 HPNL--LRLLGCCIEEG------------------EPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYL 438 (692)
Q Consensus 379 H~ni--v~l~g~~~~~~------------------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yL 438 (692)
+.++ |+.+||..-.. ...||.||++... .+ ..+-+.++.+-|..+
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~----~~~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PL----QIRDIPQMLRDLKIL 180 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------cc----chhHHHHHHHHHHHH
Confidence 4566 99999974331 2357888876533 11 223445777788889
Q ss_pred HhcCCCCeEecCCCCCceEEcCCCceEEeeecCC
Q 005536 439 HSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 439 H~~~~~~iiHrDik~~NILld~~~~~kl~DFGla 472 (692)
|.. +|+-+|+++.|.. .-||+|||.+
T Consensus 181 ~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHC---CeeeccCcccccc-----CCEEEecccC
Confidence 995 9999999999986 4589999864
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.59 E-value=0.00031 Score=73.89 Aligned_cols=142 Identities=20% Similarity=0.248 Sum_probs=86.8
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC--CeeeeEEE------EEeCCeeEEEEE
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP--NLLRLLGC------CIEEGEPILVYE 400 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~--niv~l~g~------~~~~~~~~lV~E 400 (692)
.+.|..|....+|+....+ ..+++|+... ...++...|++++..+.+. .+.+++.. ....+..++|+|
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 4567778778999987644 4688888764 2345566788888877533 34555442 123456789999
Q ss_pred eCCCCCHHH--------------HHhhcc-C--------CCCCHHHHHH----------HHHHHHHHHHHHHh----cCC
Q 005536 401 FMPNGTLCQ--------------HLQRER-G--------SGLPWTIRIT----------IATETAQAIAYLHS----AMN 443 (692)
Q Consensus 401 ~~~~gsL~~--------------~l~~~~-~--------~~l~~~~~~~----------ia~~ia~aL~yLH~----~~~ 443 (692)
|++|..+.. .||... . ....|..... ....+..++.++.. ...
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 998866421 111110 0 0123322211 11223344555543 123
Q ss_pred CCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 444 PPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 444 ~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
..++|+|+.|.|||++++..+.|.||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 5799999999999999987789999998753
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.58 E-value=0.0012 Score=71.75 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=56.2
Q ss_pred ceeecccccEEEEEEEEeCC-CEEEEEEeecC-----C--chhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeCCeeEE
Q 005536 329 KHRLGTGAYGTVYAGKLHND-DWVAIKRFRYR-----D--TDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEEGEPIL 397 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~-~~vavK~~~~~-----~--~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~~~~~l 397 (692)
.+.||.|.+..||+....+| +.|+||.-... . +...+++..|.+.|..+. ..++++++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 35799999999999998877 48999985422 1 234567788888888763 3467778777 4456789
Q ss_pred EEEeCCCCC
Q 005536 398 VYEFMPNGT 406 (692)
Q Consensus 398 V~E~~~~gs 406 (692)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998744
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.56 E-value=0.00036 Score=71.83 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=78.4
Q ss_pred ecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCe-eeeEEEEEeCCeeEEEEEeCCCCCHHH-
Q 005536 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL-LRLLGCCIEEGEPILVYEFMPNGTLCQ- 409 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~gsL~~- 409 (692)
+..|-...+|+.. .++..+++|........-.-...+|.++++.+....+ .++++... -.+||||++|..+..
T Consensus 4 ~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIE-HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEE-eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence 4567778899887 4566788887654322211235789999988864333 44444432 368999998866532
Q ss_pred -------------H---Hhhcc--CCCCCHHHHH-HHH---------HHHHHHHHHHHhc-----CCCCeEecCCCCCce
Q 005536 410 -------------H---LQRER--GSGLPWTIRI-TIA---------TETAQAIAYLHSA-----MNPPIYHRDIKSSNI 456 (692)
Q Consensus 410 -------------~---l~~~~--~~~l~~~~~~-~ia---------~~ia~aL~yLH~~-----~~~~iiHrDik~~NI 456 (692)
. ||... +.+++...++ ... ..+...+..+-.. ....++|+|+.|.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 1 12111 1112222111 111 0111112222211 123589999999999
Q ss_pred EEcCCCceEEeeecCCcc
Q 005536 457 LLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 457 Lld~~~~~kl~DFGla~~ 474 (692)
++++++ +.|.||..+..
T Consensus 159 l~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEeCCC-CEEEeccccCc
Confidence 999877 78999998764
No 475
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.53 E-value=0.00072 Score=64.07 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=85.7
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
..+.|++|.+|.||+|.+.++ .+|+|+-+. +.....+..|+++|..+.-.++.+=+-.+- .-.+.|||+.|-.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGG-EVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeeccCc-eEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhcCcch
Confidence 356799999999999988654 788888654 345577899999999998776654333222 22345999988788
Q ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC-CCceEEcCCCceEEeeecCCcc
Q 005536 408 CQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIK-SSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 408 ~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik-~~NILld~~~~~kl~DFGla~~ 474 (692)
.+.-... +-...+ .+++.---|.. .+|-|+.|. |..++|..+..+.|+||.-|+.
T Consensus 100 ~~~~~~~-----~rk~l~----~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIGG-----DRKHLL----RVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcc-----cHHHHH----HHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 6654321 222222 33444222333 388888886 4444444555999999998874
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.48 E-value=0.0028 Score=67.43 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=78.4
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCC--CCeeeeEE------EEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH--PNLLRLLG------CCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H--~niv~l~g------~~~~~~~~~lV~E~ 401 (692)
+.|+.|...++|+....++ .+++|++.... .++...|+.++..|.. -.+.+.+. +....+..++++||
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 4566777789999876555 58889876222 2333345555555532 12334442 12235568999999
Q ss_pred CCCCCHH-----------H---HHhhccC---------CCCCH-HHHHH-------------HHHHHHHHHHHHHhc---
Q 005536 402 MPNGTLC-----------Q---HLQRERG---------SGLPW-TIRIT-------------IATETAQAIAYLHSA--- 441 (692)
Q Consensus 402 ~~~gsL~-----------~---~l~~~~~---------~~l~~-~~~~~-------------ia~~ia~aL~yLH~~--- 441 (692)
++|..+. + .||.... ..+.| ..... +...+...++.+.+.
T Consensus 104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 183 (319)
T PRK05231 104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP 183 (319)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence 9886431 1 1121110 01222 11111 111111222333311
Q ss_pred -CCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 442 -MNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 442 -~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
...+++|+|+.+.|||++++...-|.||+.+..
T Consensus 184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 245899999999999999776668999998753
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.32 E-value=0.0014 Score=69.03 Aligned_cols=140 Identities=19% Similarity=0.252 Sum_probs=83.6
Q ss_pred eeecccccEEEEEEEEeC-------CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCC-eeeeEEEEEeCCeeEEEEEe
Q 005536 330 HRLGTGAYGTVYAGKLHN-------DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPN-LLRLLGCCIEEGEPILVYEF 401 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n-iv~l~g~~~~~~~~~lV~E~ 401 (692)
+.|..|-...+|+....+ ++.+++|+..... ....+..+|.+++..+.... ..++++++.. .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 456667677899987655 4788899876432 23345568888888885333 3455555432 368999
Q ss_pred CCCCCHHHH-----------------HhhccCC-------CC--CHHHHHH--------------------------HHH
Q 005536 402 MPNGTLCQH-----------------LQRERGS-------GL--PWTIRIT--------------------------IAT 429 (692)
Q Consensus 402 ~~~gsL~~~-----------------l~~~~~~-------~l--~~~~~~~--------------------------ia~ 429 (692)
++|.++... ||..... .. -|..... +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 988765421 1111111 00 0111111 111
Q ss_pred HHHHHHHHHHh------cCCCCeEecCCCCCceEEcCC----CceEEeeecCCcc
Q 005536 430 ETAQAIAYLHS------AMNPPIYHRDIKSSNILLDYN----YRSKVADFGLSRL 474 (692)
Q Consensus 430 ~ia~aL~yLH~------~~~~~iiHrDik~~NILld~~----~~~kl~DFGla~~ 474 (692)
++...+.+|.. .....++|+|+.+.|||++++ +.++++||..+..
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 22223334432 134578999999999999985 8899999998854
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.18 E-value=0.007 Score=64.06 Aligned_cols=143 Identities=15% Similarity=0.218 Sum_probs=83.3
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC--CeeeeEEEE------EeCCeeEEEEE
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP--NLLRLLGCC------IEEGEPILVYE 400 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~--niv~l~g~~------~~~~~~~lV~E 400 (692)
.+.++.|....+|+....++ .+++|+.+... ..++...|++++..|... .+.+++... ...+..++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 34566776789998876555 57788775431 234455677777776422 244544421 22456789999
Q ss_pred eCCCCCHH-----------H---HHhhccCC----------CCCHHHHH------------HHHHHHHHHHHHHHh----
Q 005536 401 FMPNGTLC-----------Q---HLQRERGS----------GLPWTIRI------------TIATETAQAIAYLHS---- 440 (692)
Q Consensus 401 ~~~~gsL~-----------~---~l~~~~~~----------~l~~~~~~------------~ia~~ia~aL~yLH~---- 440 (692)
|++|..+. . .+|..... .-.|.... .....+...++++..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 99875431 1 12211100 01121111 011123345555543
Q ss_pred cCCCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 441 AMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 441 ~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
....+++|+|+++.||+++++....|.||+.+..
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred cCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 2346899999999999999988778999998753
No 479
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.13 E-value=0.0014 Score=77.64 Aligned_cols=195 Identities=17% Similarity=0.162 Sum_probs=131.8
Q ss_pred HHHHHHHHHhCCCCCeeeeEEEEEeCCe----eEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 005536 367 VMNEIKLLSSVSHPNLLRLLGCCIEEGE----PILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAM 442 (692)
Q Consensus 367 ~~~E~~il~~l~H~niv~l~g~~~~~~~----~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~ 442 (692)
...|...+.++.|+|++.++++..+... ..+..|++..-++...++.. ..++....+.+..+..+||+|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~~- 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHSL- 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHHh-
Confidence 3456777788899999999999876543 23456788888888888764 4578888889999999999999995
Q ss_pred CCCeEecCCCCC---ceEEcCCCceEEe--eecCCccCCCCCCcccccCCCCCCCCCccccccCCCCC--ccceeehhHH
Q 005536 443 NPPIYHRDIKSS---NILLDYNYRSKVA--DFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSD--KSDVYSFGVV 515 (692)
Q Consensus 443 ~~~iiHrDik~~---NILld~~~~~kl~--DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~--ksDV~SfGvl 515 (692)
...|.-+..+ +.-.+..+.+.++ ||+.++....... .....-+..|.+||......++. ..|+|.+|.+
T Consensus 306 --~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 306 --SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLL 381 (1351)
T ss_pred --ccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccccchhhhhhHHHHHHHH
Confidence 4444444444 4444566677777 8888875433221 12223455677888776555444 4799999999
Q ss_pred HHHHHhCCcccCCCCCcccccHHHHHHHHhccCcccccccccCCcCCCccCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005536 516 LIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVA 595 (692)
Q Consensus 516 l~eLltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ei~d~~l~~~~~~~~~~~~~~l~~L~~~Cl~~~p~~RPsm~eVl 595 (692)
+..+..+..+...... ...+++. .......+...+|+..++++|+...+++
T Consensus 382 ~~~~~~~~~i~~~~~~------------------~~~~l~~-----------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll 432 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSAV------------------PVSLLDV-----------LSTSELLDALPKCLDEDSEERLSALELL 432 (1351)
T ss_pred HhhhhhcCcccccccc------------------hhhhhcc-----------ccchhhhhhhhhhcchhhhhccchhhhh
Confidence 9999998654331110 0111111 0111456788899999999999999887
Q ss_pred HH
Q 005536 596 EE 597 (692)
Q Consensus 596 ~~ 597 (692)
..
T Consensus 433 ~~ 434 (1351)
T KOG1035|consen 433 TH 434 (1351)
T ss_pred hc
Confidence 53
No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.85 E-value=0.0097 Score=62.66 Aligned_cols=127 Identities=20% Similarity=0.317 Sum_probs=76.4
Q ss_pred CCEEEEEEee--cCCchhHHHHHHHHHHHHhCCC--CCeeeeEEEEEeCC--eeEEEEEeCCCCCHHHHHhhc-------
Q 005536 348 DDWVAIKRFR--YRDTDSIDQVMNEIKLLSSVSH--PNLLRLLGCCIEEG--EPILVYEFMPNGTLCQHLQRE------- 414 (692)
Q Consensus 348 ~~~vavK~~~--~~~~~~~~~~~~E~~il~~l~H--~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~------- 414 (692)
++.+++. .. ...........+|..+|+.+.- --+...++.|.++. .++.||+|+++..+.+.+...
T Consensus 48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~ 126 (321)
T COG3173 48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFA 126 (321)
T ss_pred CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHH
Confidence 6677777 32 1233455666788888888753 44556677777665 779999999874332211110
Q ss_pred -----------cC-----------------CC-CCHHHHHHHHH--------HHHHHHHHHHhcC-----CCCeEecCCC
Q 005536 415 -----------RG-----------------SG-LPWTIRITIAT--------ETAQAIAYLHSAM-----NPPIYHRDIK 452 (692)
Q Consensus 415 -----------~~-----------------~~-l~~~~~~~ia~--------~ia~aL~yLH~~~-----~~~iiHrDik 452 (692)
+. .. -.|...++.+. ....-..||+... .+.++|+|++
T Consensus 127 ~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~ 206 (321)
T COG3173 127 LDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYR 206 (321)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcc
Confidence 00 00 11222221110 1122344554432 2469999999
Q ss_pred CCceEEcCCCceEEeeecCCccC
Q 005536 453 SSNILLDYNYRSKVADFGLSRLG 475 (692)
Q Consensus 453 ~~NILld~~~~~kl~DFGla~~~ 475 (692)
+.||+++++.-+-|.||+++.+.
T Consensus 207 ~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 207 PGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred cCCEEEeCCCeeEEEeccccccC
Confidence 99999999988999999999763
No 481
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.78 E-value=0.01 Score=61.79 Aligned_cols=31 Identities=23% Similarity=0.474 Sum_probs=26.0
Q ss_pred CCeEecCCCCCceEEcCCCc-eEEeeecCCcc
Q 005536 444 PPIYHRDIKSSNILLDYNYR-SKVADFGLSRL 474 (692)
Q Consensus 444 ~~iiHrDik~~NILld~~~~-~kl~DFGla~~ 474 (692)
+.++|+|+++.|||+++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997555 56999998865
No 482
>PLN02236 choline kinase
Probab=96.68 E-value=0.015 Score=62.58 Aligned_cols=140 Identities=21% Similarity=0.241 Sum_probs=80.7
Q ss_pred eeecccccEEEEEEEEeC-----CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCe-eeeEEEEEeCCeeEEEEEeCC
Q 005536 330 HRLGTGAYGTVYAGKLHN-----DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL-LRLLGCCIEEGEPILVYEFMP 403 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~ 403 (692)
+.|-.|-.-.+|+....+ ++.|++|..........+ -.+|..++..+...++ .++++.+.. + .|+||++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~ 116 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIH 116 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeC
Confidence 345457777889876533 357888887654332222 2678888888864433 455665533 2 5899998
Q ss_pred CCCHHHH-----------------Hhhcc--CC--CCCHHHHHHHHHH-----------------HHHHHHHHHh-----
Q 005536 404 NGTLCQH-----------------LQRER--GS--GLPWTIRITIATE-----------------TAQAIAYLHS----- 440 (692)
Q Consensus 404 ~gsL~~~-----------------l~~~~--~~--~l~~~~~~~ia~~-----------------ia~aL~yLH~----- 440 (692)
+.+|... +|... .. ...|.....+..+ +...+..|.+
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 7666321 12111 00 1123322222211 1112222221
Q ss_pred cCCCCeEecCCCCCceEEcC-CCceEEeeecCCcc
Q 005536 441 AMNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRL 474 (692)
Q Consensus 441 ~~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~ 474 (692)
.....++|+|+++.|||+++ +..+.+.||..+..
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 11246899999999999986 46899999988754
No 483
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.63 E-value=0.003 Score=65.34 Aligned_cols=144 Identities=17% Similarity=0.195 Sum_probs=96.8
Q ss_pred CChHHHHHhhc---cCccceeecccccEEEEEEEEeCCCEEEEEEeecCC-----------------ch-----hHHHHH
Q 005536 314 YPYKEIEKATS---FFSEKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD-----------------TD-----SIDQVM 368 (692)
Q Consensus 314 ~~~~el~~~~~---~f~~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~-----------------~~-----~~~~~~ 368 (692)
|.|-.|+...+ -++..++||-|.-+-||.+-..+|++.++|.-+... .. +.-...
T Consensus 79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~ 158 (465)
T KOG2268|consen 79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT 158 (465)
T ss_pred chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence 44555555444 356788999999999999999999999988654220 00 111245
Q ss_pred HHHHHHHhCC-C-CCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 005536 369 NEIKLLSSVS-H-PNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPI 446 (692)
Q Consensus 369 ~E~~il~~l~-H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~i 446 (692)
+|+..|+.|. | =-+.+.+++ ..-++|||++.+-.|.+.-+-. +.. .+...+..-+.-|.. .|+
T Consensus 159 kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~-----d~~---~ly~~lm~~Iv~la~---~Gl 223 (465)
T KOG2268|consen 159 KEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHVE-----DPP---TLYDDLMGLIVRLAN---HGL 223 (465)
T ss_pred HHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeecC-----ChH---HHHHHHHHHHHHHHH---cCc
Confidence 7888888885 3 345555554 3458899999887775533221 222 222233333444444 499
Q ss_pred EecCCCCCceEEcCCCceEEeeecCC
Q 005536 447 YHRDIKSSNILLDYNYRSKVADFGLS 472 (692)
Q Consensus 447 iHrDik~~NILld~~~~~kl~DFGla 472 (692)
||+|..-=||+++++..++++||--.
T Consensus 224 IHgDFNEFNimv~dd~~i~vIDFPQm 249 (465)
T KOG2268|consen 224 IHGDFNEFNIMVKDDDKIVVIDFPQM 249 (465)
T ss_pred eecccchheeEEecCCCEEEeechHh
Confidence 99999999999999999999999654
No 484
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=96.50 E-value=0.00098 Score=45.96 Aligned_cols=29 Identities=45% Similarity=1.035 Sum_probs=21.8
Q ss_pred cCCCCCcccccccccCCCCceeeecCCCCCCCCcc
Q 005536 201 NCSKNADCTRNFTFANGISGHRCRCQEGFEGDGFV 235 (692)
Q Consensus 201 ~C~~~~~C~~~~~~~~~~~g~~C~C~~G~~Gnpy~ 235 (692)
.|+.|+.|.+. ...|.|.|..||.||||.
T Consensus 7 ~C~~nA~C~~~------~~~~~C~C~~Gy~GdG~~ 35 (36)
T PF12947_consen 7 GCHPNATCTNT------GGSYTCTCKPGYEGDGFF 35 (36)
T ss_dssp GS-TTCEEEE-------TTSEEEEE-CEEECCSTC
T ss_pred CCCCCcEeecC------CCCEEeECCCCCccCCcC
Confidence 47889999865 238999999999999873
No 485
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=96.35 E-value=0.0033 Score=38.92 Aligned_cols=24 Identities=21% Similarity=0.675 Sum_probs=18.7
Q ss_pred ceeeecCCCCCCCCccCCCCCccccc
Q 005536 220 GHRCRCQEGFEGDGFVAGDGCRRTSD 245 (692)
Q Consensus 220 g~~C~C~~G~~Gnpy~~~~gC~~i~e 245 (692)
+|+|.|..||.=++ .+..|.||||
T Consensus 1 sy~C~C~~Gy~l~~--d~~~C~DIdE 24 (24)
T PF12662_consen 1 SYTCSCPPGYQLSP--DGRSCEDIDE 24 (24)
T ss_pred CEEeeCCCCCcCCC--CCCccccCCC
Confidence 58999999998544 2347999987
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.15 E-value=0.093 Score=55.40 Aligned_cols=31 Identities=29% Similarity=0.331 Sum_probs=26.5
Q ss_pred CCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 443 ~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
..+++|+|+.+.||+++. +.+.|.||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 358999999999999998 5789999997653
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.13 E-value=0.084 Score=57.52 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred ceeecccccEEEEEEEEeCCCEEEEEEeecCC-------chhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeCCeeEEE
Q 005536 329 KHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRD-------TDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEEGEPILV 398 (692)
Q Consensus 329 ~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~~~~~lV 398 (692)
.+.||.|..-.||+.... +..++||+-.... +...++-..|...|..+. ..++.+++.++.+ .-+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEE
Confidence 567899999999998764 4569999875221 123344445666666553 3588889988774 45788
Q ss_pred EEeCCC
Q 005536 399 YEFMPN 404 (692)
Q Consensus 399 ~E~~~~ 404 (692)
|||+++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999976
No 488
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.13 E-value=0.062 Score=57.50 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=49.4
Q ss_pred eecccccEEEEEEEEeCC-CEEEEEEeecC-------CchhHHHHHHHHHHHHhCC--CC-CeeeeEEEEEeCCeeEEEE
Q 005536 331 RLGTGAYGTVYAGKLHND-DWVAIKRFRYR-------DTDSIDQVMNEIKLLSSVS--HP-NLLRLLGCCIEEGEPILVY 399 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~~-~~vavK~~~~~-------~~~~~~~~~~E~~il~~l~--H~-niv~l~g~~~~~~~~~lV~ 399 (692)
.||.|....||++...++ +.|+||.-... -+-..++..-|...|.... -| .+++++.+ +.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 579999999999997654 57999986421 1334455566777776653 23 45555543 455667999
Q ss_pred EeCCCC
Q 005536 400 EFMPNG 405 (692)
Q Consensus 400 E~~~~g 405 (692)
|+++..
T Consensus 80 EdL~~~ 85 (370)
T TIGR01767 80 EDLSHH 85 (370)
T ss_pred hhCccc
Confidence 999653
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.12 E-value=0.023 Score=59.36 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=49.9
Q ss_pred cceeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeCCeeEEEEEeCCC
Q 005536 328 EKHRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 328 ~~~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~ 404 (692)
..+.++.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+++++++....+..+||+||++.
T Consensus 21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~ 96 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM 96 (288)
T ss_dssp EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred eeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence 35678989999999877 667889999876 334467888888888883 45688999998888888999999987
Q ss_pred C
Q 005536 405 G 405 (692)
Q Consensus 405 g 405 (692)
+
T Consensus 97 ~ 97 (288)
T PF03881_consen 97 G 97 (288)
T ss_dssp -
T ss_pred C
Confidence 6
No 490
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.94 E-value=0.0014 Score=79.20 Aligned_cols=175 Identities=12% Similarity=0.048 Sum_probs=119.9
Q ss_pred EEEEEeecCCchhH-----HHHHHHHHHHHhCCCCCeeeeEEEEE--eCCeeEEEEEeCCCCCHHHHHhhccC--CCCCH
Q 005536 351 VAIKRFRYRDTDSI-----DQVMNEIKLLSSVSHPNLLRLLGCCI--EEGEPILVYEFMPNGTLCQHLQRERG--SGLPW 421 (692)
Q Consensus 351 vavK~~~~~~~~~~-----~~~~~E~~il~~l~H~niv~l~g~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~--~~l~~ 421 (692)
..+|+.+..+-+.. +....|..-++...|+++.....-.. +..+.+.+++|+..|.+++.|.+... ..++.
T Consensus 1255 Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~ 1334 (2724)
T KOG1826|consen 1255 FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDR 1334 (2724)
T ss_pred eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchh
Confidence 45666554433332 23344555555668988877655433 23467889999999999998876432 23444
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCCCccccc
Q 005536 422 TIRITIATETAQAIAYLHSAM--NPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ 499 (692)
Q Consensus 422 ~~~~~ia~~ia~aL~yLH~~~--~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 499 (692)
.-....-.+...+..-.|+.. ..--+|+++|+-|.+|+.+.++|++++|+.+..... ........+++-|+.|+...
T Consensus 1335 ~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N 1413 (2724)
T KOG1826|consen 1335 SPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKN 1413 (2724)
T ss_pred chHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHH
Confidence 333333334355555555542 234689999999999999999999999999842222 22234456788899999998
Q ss_pred cCCCCCccceeehhHHHHHHHhCCccc
Q 005536 500 YFHLSDKSDVYSFGVVLIEIITALKVV 526 (692)
Q Consensus 500 ~~~~s~ksDV~SfGvll~eLltg~~p~ 526 (692)
.-.++.++|+|..|..+|++--|..++
T Consensus 1414 ~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1414 EIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 888999999999999999998876654
No 491
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.82 E-value=0.067 Score=56.60 Aligned_cols=136 Identities=18% Similarity=0.222 Sum_probs=93.8
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecC-----Cch---------------------hHHHHHHHHHHHHhCCCCCee
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYR-----DTD---------------------SIDQVMNEIKLLSSVSHPNLL 383 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~-----~~~---------------------~~~~~~~E~~il~~l~H~niv 383 (692)
..|..|--+-||.+.-.+|..+|||+++.. +.+ -.-...+|+.-|.+|+...|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357889999999999999999999998643 111 012345688888888765543
Q ss_pred eeEEEEEeCCeeEEEEEeCCCCC-HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCC
Q 005536 384 RLLGCCIEEGEPILVYEFMPNGT-LCQHLQRERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNY 462 (692)
Q Consensus 384 ~l~g~~~~~~~~~lV~E~~~~gs-L~~~l~~~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~ 462 (692)
-.--..+. .-.|||+|+.... -.-.|. ...++...+..+-.+++.-+.-|-+.| ++||.||.--|+|+- +|
T Consensus 230 ~PePIlLk--~hVLVM~FlGrdgw~aPkLK---d~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-dG 301 (520)
T KOG2270|consen 230 CPEPILLK--NHVLVMEFLGRDGWAAPKLK---DASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-DG 301 (520)
T ss_pred CCCceeee--cceEeeeeccCCCCcCcccc---cccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-CC
Confidence 32222222 2369999984211 111121 234677777788888888888887764 899999999999985 45
Q ss_pred ceEEeeecCCc
Q 005536 463 RSKVADFGLSR 473 (692)
Q Consensus 463 ~~kl~DFGla~ 473 (692)
.+.|+|.+-+.
T Consensus 302 ~lyiIDVSQSV 312 (520)
T KOG2270|consen 302 KLYIIDVSQSV 312 (520)
T ss_pred EEEEEEccccc
Confidence 78999998775
No 492
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.61 E-value=0.13 Score=54.32 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=28.8
Q ss_pred CCCeEecCCCCCceEEcCCCceEEeeecCCcc
Q 005536 443 NPPIYHRDIKSSNILLDYNYRSKVADFGLSRL 474 (692)
Q Consensus 443 ~~~iiHrDik~~NILld~~~~~kl~DFGla~~ 474 (692)
..+++|+|+.+.|||+++++.+.|.||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 35799999999999999999999999998865
No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.59 E-value=0.08 Score=56.33 Aligned_cols=139 Identities=22% Similarity=0.338 Sum_probs=83.2
Q ss_pred ecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCC------eeeeEEEEE--eCC--eeEEEEEe
Q 005536 332 LGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPN------LLRLLGCCI--EEG--EPILVYEF 401 (692)
Q Consensus 332 LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n------iv~l~g~~~--~~~--~~~lV~E~ 401 (692)
|.+ .-..||+....+++. ++|..+.. ....+...|...+..|.-.. +..+=|-.. -.. ..+-+++|
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~ 109 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEY 109 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEe
Confidence 444 456789988877775 88888764 34455566777776663211 222222211 123 77889999
Q ss_pred CCCCCHHH---------------HHhhc-------c---CCCCCHHH-------------HHHHHHHHHHHHHHHHhcC-
Q 005536 402 MPNGTLCQ---------------HLQRE-------R---GSGLPWTI-------------RITIATETAQAIAYLHSAM- 442 (692)
Q Consensus 402 ~~~gsL~~---------------~l~~~-------~---~~~l~~~~-------------~~~ia~~ia~aL~yLH~~~- 442 (692)
++|..+.. .||.. + .....|.. ......++...+..+.+..
T Consensus 110 l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~ 189 (331)
T COG2334 110 LPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLP 189 (331)
T ss_pred cCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhch
Confidence 99877762 11110 0 01244541 0123344444555554422
Q ss_pred ---CCC---eEecCCCCCceEEcCCCc-eEEeeecCCcc
Q 005536 443 ---NPP---IYHRDIKSSNILLDYNYR-SKVADFGLSRL 474 (692)
Q Consensus 443 ---~~~---iiHrDik~~NILld~~~~-~kl~DFGla~~ 474 (692)
... +||+|+.+.|||+|.+.. ..+.||+-+..
T Consensus 190 ~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 190 AHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred hhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 223 999999999999999885 99999998753
No 494
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.45 E-value=0.11 Score=55.64 Aligned_cols=140 Identities=17% Similarity=0.238 Sum_probs=78.4
Q ss_pred eeecccccEEEEEEEEeC----CCEEEEEEeecCCchhHHHHHHHHHHHHhCCCCCe-eeeEEEEEeCCeeEEEEEeCCC
Q 005536 330 HRLGTGAYGTVYAGKLHN----DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHPNL-LRLLGCCIEEGEPILVYEFMPN 404 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~----~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~ 404 (692)
+.|..|=.-.+|+....+ +..|++|....... ..-.-.+|..+++.+..-++ .++++++. .+ +|.+|+++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g 94 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA 94 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence 345556667788876543 23788888765432 22223578888888865544 45566552 22 58999977
Q ss_pred CCHHH-----------------HHhhccC---C-CCCHHHHHHHHHH----------------------HHHHHHHHHhc
Q 005536 405 GTLCQ-----------------HLQRERG---S-GLPWTIRITIATE----------------------TAQAIAYLHSA 441 (692)
Q Consensus 405 gsL~~-----------------~l~~~~~---~-~l~~~~~~~ia~~----------------------ia~aL~yLH~~ 441 (692)
.+|.. .||.... . .-.|....++..+ +..-+..+...
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 65521 1121110 0 1123332222211 11112222211
Q ss_pred -----CCCCeEecCCCCCceEEcC-CCceEEeeecCCcc
Q 005536 442 -----MNPPIYHRDIKSSNILLDY-NYRSKVADFGLSRL 474 (692)
Q Consensus 442 -----~~~~iiHrDik~~NILld~-~~~~kl~DFGla~~ 474 (692)
...-+.|+|+.+.|||+++ ++.++++||..|-.
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1124789999999999975 57899999988753
No 495
>PRK06148 hypothetical protein; Provisional
Probab=95.43 E-value=0.13 Score=63.30 Aligned_cols=141 Identities=18% Similarity=0.290 Sum_probs=79.2
Q ss_pred eeecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC--CCC--eeeeEE--------EEEe-CC--e
Q 005536 330 HRLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS--HPN--LLRLLG--------CCIE-EG--E 394 (692)
Q Consensus 330 ~~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~--H~n--iv~l~g--------~~~~-~~--~ 394 (692)
+.|+ |..-.+|+....+++.+++|+.+.... ......|.+.|..|. ++. +.+++- .... .+ .
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~--~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEP--RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccc--hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 4564 456778988887888899999986432 233334555555442 122 223221 1111 22 4
Q ss_pred eEEEEEeCCCCCHHHH-----------------Hhhc--------cCCCCCHHHH-----------------HHHHHHHH
Q 005536 395 PILVYEFMPNGTLCQH-----------------LQRE--------RGSGLPWTIR-----------------ITIATETA 432 (692)
Q Consensus 395 ~~lV~E~~~~gsL~~~-----------------l~~~--------~~~~l~~~~~-----------------~~ia~~ia 432 (692)
.+-+++|++|..|.+. |+.. ....+.|..+ ..++.++.
T Consensus 108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~ 187 (1013)
T PRK06148 108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL 187 (1013)
T ss_pred EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence 5678999998777541 1110 0112344321 12222222
Q ss_pred HHHH-----HHHhcCCCCeEecCCCCCceEEcCCC--ceE-EeeecCCcc
Q 005536 433 QAIA-----YLHSAMNPPIYHRDIKSSNILLDYNY--RSK-VADFGLSRL 474 (692)
Q Consensus 433 ~aL~-----yLH~~~~~~iiHrDik~~NILld~~~--~~k-l~DFGla~~ 474 (692)
..+. .|.+ ....+||+|+.+.|||++.+. ++. |.|||-+..
T Consensus 188 ~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 188 ARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 2221 2222 345799999999999999875 454 999998754
No 496
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.97 E-value=0.51 Score=50.35 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=44.6
Q ss_pred cccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCCCC--CeeeeE---E--EEEeCCeeEEEEEeCCCCC
Q 005536 335 GAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSHP--NLLRLL---G--CCIEEGEPILVYEFMPNGT 406 (692)
Q Consensus 335 G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~--niv~l~---g--~~~~~~~~~lV~E~~~~gs 406 (692)
+.-..||+....++..+++|..+.. .....+...|++.+..|... .++..+ | ....++..+.++++++|..
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~-~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPE-RWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA 113 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCcc-cCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence 4556799988878888999987633 23445666777777766321 122211 1 1223456788999998754
No 497
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.96 E-value=0.054 Score=53.82 Aligned_cols=122 Identities=17% Similarity=0.109 Sum_probs=60.2
Q ss_pred CCEEEEEEeecCCchhHHHHHHHHHHHHhCCC-CCeeeeEEEEEeCCeeEEEEEeCCCCCHHH-------H---------
Q 005536 348 DDWVAIKRFRYRDTDSIDQVMNEIKLLSSVSH-PNLLRLLGCCIEEGEPILVYEFMPNGTLCQ-------H--------- 410 (692)
Q Consensus 348 ~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~-------~--------- 410 (692)
++.|+||+.... ....-.-.+|..+++.+.. -.-.++++.+.+ ..|+||+++.+|.. .
T Consensus 2 ~~~~~~Ri~g~~-t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~ 76 (211)
T PF01633_consen 2 PEKYLVRIPGEG-TENFIDRENENEALKLLSEAGLGPKIIYFFEN----GRVEEFIEGRTLSPEDFRNPEILKRIAKLLA 76 (211)
T ss_dssp TSEEEEEEEESC-GCSHHHHHHHHHHHHHHHHTTSSS-EEEEETT----EEEEE--SSEE--CGGGGSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCC-cccccCHHHHHHHHHHHHHcCCCCeEEEEcCC----CcEEEEecccccChhhccChHHHHHHHHHHH
Confidence 456888888755 3444555678888888864 444556665433 26779997655421 1
Q ss_pred -HhhccC-----CCCCHHHHHHH----------------------HHHHHHHHHHHHh---c--CCCCeEecCCCCCceE
Q 005536 411 -LQRERG-----SGLPWTIRITI----------------------ATETAQAIAYLHS---A--MNPPIYHRDIKSSNIL 457 (692)
Q Consensus 411 -l~~~~~-----~~l~~~~~~~i----------------------a~~ia~aL~yLH~---~--~~~~iiHrDik~~NIL 457 (692)
+|.... ..--|.....+ ...+..-+..+.+ . ....+.|+|+.+.|||
T Consensus 77 ~lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil 156 (211)
T PF01633_consen 77 KLHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNIL 156 (211)
T ss_dssp HHHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEE
T ss_pred HHhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEE
Confidence 111100 00112222111 1111222222221 1 1135789999999999
Q ss_pred E-cCCCceEEeeecCCcc
Q 005536 458 L-DYNYRSKVADFGLSRL 474 (692)
Q Consensus 458 l-d~~~~~kl~DFGla~~ 474 (692)
+ +.++.++++||..|..
T Consensus 157 ~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 157 INNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp ETSSSSCEEE--GTT-EE
T ss_pred eccCCCeEEEecHHHHhh
Confidence 9 8899999999988754
No 498
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.89 E-value=0.13 Score=50.81 Aligned_cols=152 Identities=16% Similarity=0.127 Sum_probs=92.0
Q ss_pred cccEEEEEEEEeCCCEEEEEEeecCCch-hHHHHHHHHHHHHhCCCCCeeeeEEEEEeCCeeEEEEEeCCCCCHHHHHhh
Q 005536 335 GAYGTVYAGKLHNDDWVAIKRFRYRDTD-SIDQVMNEIKLLSSVSHPNLLRLLGCCIEEGEPILVYEFMPNGTLCQHLQR 413 (692)
Q Consensus 335 G~fG~Vy~g~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~ 413 (692)
++-.|.-+|+-.-| ...+|+++...-. ...-|.++..++.+++ .|++|..- .....-++.|++-....
T Consensus 73 ~gNsTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------ 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------ 141 (308)
T ss_pred CCceEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------
Confidence 33444445543333 3566776644333 4456788899988875 46666621 33456788898832111
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceEEcCCCceEEeeecCCccCCCCCCcccccCCCCCCCC
Q 005536 414 ERGSGLPWTIRITIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYL 493 (692)
Q Consensus 414 ~~~~~l~~~~~~~ia~~ia~aL~yLH~~~~~~iiHrDik~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~ 493 (692)
.. ..++.-=+.+|.-.|+. +++.+|+|-.|+||+-|..|.+||.|=+.--. . +.-|.
T Consensus 142 -----~~----~N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~---~----------~V~~v 198 (308)
T PF07387_consen 142 -----NF----SNFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE---N----------QVNMV 198 (308)
T ss_pred -----ch----hHHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh---h----------eeeEE
Confidence 11 11222224677888964 47899999999999999999999999653210 0 11122
Q ss_pred CccccccCCCCCccceeehhHHHHHHHhCC
Q 005536 494 DPQYHQYFHLSDKSDVYSFGVVLIEIITAL 523 (692)
Q Consensus 494 aPE~~~~~~~s~ksDV~SfGvll~eLltg~ 523 (692)
--| ....|.++.+=+|=.-++++....
T Consensus 199 N~~---Y~~lT~~aE~~~fv~s~l~~v~~~ 225 (308)
T PF07387_consen 199 NIE---YESLTQEAEVKVFVKSCLKLVEKQ 225 (308)
T ss_pred eee---ccccChHHHHHHHHHHHHHHHHHH
Confidence 211 234567788878877777777643
No 499
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=94.59 E-value=0.053 Score=59.61 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHhCCCCCeeeeEEEEEeC-CeeEEEEEeCCCCCHHHHHhhc
Q 005536 363 SIDQVMNEIKLLSSVSHPNLLRLLGCCIEE-GEPILVYEFMPNGTLCQHLQRE 414 (692)
Q Consensus 363 ~~~~~~~E~~il~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~ 414 (692)
...+..-....++.+.|+|+-..+.+-... ....+|+|++ +.+|++.+...
T Consensus 25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~ 76 (725)
T KOG1093|consen 25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG 76 (725)
T ss_pred cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence 345667778899999999999999887654 3477899998 78999988654
No 500
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.32 E-value=0.27 Score=48.93 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=51.0
Q ss_pred eecccccEEEEEEEEeCCCEEEEEEeecCCchhHHHHHHHHHHHHhCC---CCCeeeeEEEEEeCCeeEEEEEeCCCCCH
Q 005536 331 RLGTGAYGTVYAGKLHNDDWVAIKRFRYRDTDSIDQVMNEIKLLSSVS---HPNLLRLLGCCIEEGEPILVYEFMPNGTL 407 (692)
Q Consensus 331 ~LG~G~fG~Vy~g~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~gsL 407 (692)
.+.-|.--.-|... .+...+.||+=. ......|..|+.-|..|. .-++.+++.+-.+.+..+||+||++-+.+
T Consensus 23 ~v~gG~inea~~v~-dg~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 23 EVSGGDINEAWRLR-DGTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred ccCCccccceeEee-cCCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 44444444444432 234568888743 344567888888777764 46688889888899999999999988665
Q ss_pred H
Q 005536 408 C 408 (692)
Q Consensus 408 ~ 408 (692)
.
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 4
Done!