Your job contains 1 sequence.
>005541
MIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRGNEIDLARAKLSA
DEQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENAS
EQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNV
EEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWV
KGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGE
FIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNV
AAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTED
EKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVE
TGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTN
DFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQL
GLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKL
GAELGFEDPNLTATVSENLENLMKHKQITCA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005541
(691 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036014 - symbol:AT1G09060 "AT1G09060" species... 1995 2.9e-206 1
TAIR|locus:2125221 - symbol:AT4G00990 "AT4G00990" species... 837 1.8e-129 2
TAIR|locus:2008875 - symbol:AT1G11950 "AT1G11950" species... 730 5.3e-117 2
TAIR|locus:2027109 - symbol:AT1G62310 "AT1G62310" species... 745 1.1e-112 2
TAIR|locus:2141221 - symbol:B160 "AT4G21430" species:3702... 685 1.9e-67 1
UNIPROTKB|F1RH75 - symbol:KDM3B "Uncharacterized protein"... 258 5.1e-41 3
UNIPROTKB|Q7LBC6 - symbol:KDM3B "Lysine-specific demethyl... 259 1.0e-40 3
UNIPROTKB|E1BE97 - symbol:LOC100848816 "Uncharacterized p... 259 2.1e-40 3
MGI|MGI:1923356 - symbol:Kdm3b "KDM3B lysine (K)-specific... 257 3.6e-40 3
UNIPROTKB|F1NJZ2 - symbol:KDM3B "Uncharacterized protein"... 254 6.3e-39 3
UNIPROTKB|Q5ZIX8 - symbol:KDM3A "Lysine-specific demethyl... 252 1.7e-37 3
UNIPROTKB|E1C232 - symbol:KDM3A "Lysine-specific demethyl... 234 2.5e-36 3
UNIPROTKB|E1BFC2 - symbol:KDM3A "Uncharacterized protein"... 243 2.6e-36 3
UNIPROTKB|Q9Y4C1 - symbol:KDM3A "Lysine-specific demethyl... 243 4.3e-36 3
UNIPROTKB|E2QWU9 - symbol:KDM3A "Uncharacterized protein"... 243 5.4e-36 3
UNIPROTKB|F1SVC8 - symbol:KDM3A "Uncharacterized protein"... 243 5.5e-36 3
MGI|MGI:98847 - symbol:Kdm3a "lysine (K)-specific demethy... 240 4.9e-35 3
RGD|708351 - symbol:Kdm3a "lysine (K)-specific demethylas... 240 7.2e-35 3
FB|FBgn0037703 - symbol:JHDM2 "JmjC domain-containing his... 209 1.7e-32 3
UNIPROTKB|Q15652 - symbol:JMJD1C "Probable JmjC domain-co... 194 5.3e-26 3
MGI|MGI:1918614 - symbol:Jmjd1c "jumonji domain containin... 190 1.2e-24 3
UNIPROTKB|F1MBI2 - symbol:HR "Uncharacterized protein" sp... 162 2.8e-16 4
RGD|620634 - symbol:Hr "hair growth associated" species:1... 167 1.1e-15 3
MGI|MGI:96223 - symbol:Hr "hairless" species:10090 "Mus m... 168 1.4e-15 3
UNIPROTKB|F1RMB8 - symbol:HR "Uncharacterized protein" sp... 163 2.1e-15 4
UNIPROTKB|O43593 - symbol:HR "Protein hairless" species:9... 157 4.9e-15 4
UNIPROTKB|F1PFJ6 - symbol:HR "Uncharacterized protein" sp... 153 1.3e-14 4
RGD|708458 - symbol:Jmjd1c "jumonji domain containing 1C"... 144 5.9e-09 1
>TAIR|locus:2036014 [details] [associations]
symbol:AT1G09060 "AT1G09060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 InterPro:IPR014977
Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018866 Pfam:PF10497 KO:K15601
IPI:IPI00656590 RefSeq:NP_001031007.1 UniGene:At.10382
ProteinModelPortal:F4HZD1 PRIDE:F4HZD1 EnsemblPlants:AT1G09060.3
GeneID:837427 KEGG:ath:AT1G09060 OMA:MNWVAKL PhylomeDB:F4HZD1
Uniprot:F4HZD1
Length = 944
Score = 1995 (707.3 bits), Expect = 2.9e-206, P = 2.9e-206
Identities = 403/696 (57%), Positives = 482/696 (69%)
Query: 2 IKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRGNEIDLARAKLSAD 61
IKVRIREIPVLDKLQ+LY LLSAVLPV+KQIH QC EVELEK+LR EIDL RA+L AD
Sbjct: 282 IKVRIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELEKRLREVEIDLVRARLKAD 341
Query: 62 EQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASE 121
EQMCCN+CRIP++DY+RHC NC YDLCL CCQDLRE S SV ++N +QD + A
Sbjct: 342 EQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLREES-SVTISGTNQN--VQDRKGAP- 397
Query: 122 QVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVE 181
KL+LN KFP W+AN DGSIPCPP EYGGCG SLNL+RIFKMNWVAKLVKN E
Sbjct: 398 -----KLKLNFSYKFPEWEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAE 452
Query: 182 EMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVK 241
E+VSGCK+ D LLN D C++A RE+ N++Y PS I+++G+ F + W +
Sbjct: 453 EIVSGCKLSD---LLNPDMCDSRFCKFAEREESGDNYVYSPSLETIKTDGVAKFEQQWAE 509
Query: 242 GEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEF 301
G V VK V D SS S WDP+ IWR I E +DEK ++ + +KAI+CLD EVD+ LGEF
Sbjct: 510 GRLVTVKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEF 569
Query: 302 IKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVA 361
+ Y +G+ +E G P + KLKDWPSPSASEEF+ Y +PEFI P LEYIH RLG LNVA
Sbjct: 570 TRAYKDGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVA 629
Query: 362 AKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE------VK- 414
AKLPHYSLQND GPKIY+S GTY+E+ G+S+ +H+NM DMVYLLVH E V+
Sbjct: 630 AKLPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSEETTFERVRK 689
Query: 415 ---LPTTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 471
+P D+K+ PE+ +G DLSLG + E + T
Sbjct: 690 TKPVPEEPDQKMSENESLLS-------PEQKLRDGELHDLSLGEASMEKNEPELALTVNP 742
Query: 472 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 531
E + + G N S + GA WDVFRRQDVPKL YL+
Sbjct: 743 ENLTENGD---------------NMESSCTSSCAGGAQWDVFRRQDVPKLSGYLQR---T 784
Query: 532 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 591
F +PD + DFV+ PLY E ++LN HKR+L++EFGVEPW+FEQH GEA+FIPAGCPFQ+
Sbjct: 785 FQKPDNIQTDFVSRPLY-EGLFLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQI 843
Query: 592 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEV 651
NLQS +Q+ LDFL PESVGE+ RLAEEIRCLPNDHEAKLQ+LE+GKISLYAASSAIKEV
Sbjct: 844 TNLQSNIQVALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEV 903
Query: 652 QKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQ 687
QKLVLDPK GAELGFED NLT VS NL+ K Q
Sbjct: 904 QKLVLDPKFGAELGFEDSNLTKAVSHNLDEATKRPQ 939
>TAIR|locus:2125221 [details] [associations]
symbol:AT4G00990 "AT4G00990" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
EMBL:AY072204 EMBL:AY096708 IPI:IPI00545540 RefSeq:NP_192008.3
UniGene:At.3531 ProteinModelPortal:Q8VYB9 PaxDb:Q8VYB9 PRIDE:Q8VYB9
EnsemblPlants:AT4G00990.1 GeneID:827933 KEGG:ath:AT4G00990
TAIR:At4g00990 InParanoid:Q8VYB9 OMA:GYLEGRM PhylomeDB:Q8VYB9
ProtClustDB:CLSN2918567 Genevestigator:Q8VYB9 Uniprot:Q8VYB9
Length = 840
Score = 837 (299.7 bits), Expect = 1.8e-129, Sum P(2) = 1.8e-129
Identities = 196/540 (36%), Positives = 294/540 (54%)
Query: 14 KLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRGN---EIDLARAKLSADEQMCCNICR 70
KL+ L LL VLPV+K I+ Q E+E+E +RG+ E ++ R KL E++ C++CR
Sbjct: 154 KLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERIYCDLCR 213
Query: 71 IPIIDYHRHCGN--CMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSKL 128
I ++HR C N C D+CLSCC++L E + + + + + Q K S
Sbjct: 214 TSIANFHRSCPNKNCSVDICLSCCKELSEGFHQERDGKKNAEGKGYECRIPAGQGKDSDA 273
Query: 129 RLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCK 188
+ L F WK N+D SIPCPP E GGCG +L L R++K +WV KL+ N E+ +
Sbjct: 274 YVPL--HFSTWKLNSDSSIPCPPKECGGCGTSTLELRRLWKRDWVEKLITNAEKCTLNFR 331
Query: 189 VCDSETLLNTGSY----DHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEP 244
D + + S D Q A R++ NFLY P++ D+ + I +F+ HW+K EP
Sbjct: 332 PTDVDIVHECSSCSTNSDSIRRQAAFRKNAHDNFLYSPNAVDLAEDDIAHFQFHWMKAEP 391
Query: 245 VIVKQVCDSSSMSIWDPKDIWRGIRETADEK--TKDENRIVKAIDCLDWSEVDIELGEFI 302
VIV+ V + +S W+P +WR RE ++ T++E VKA+DCLDW EV+I L +F
Sbjct: 392 VIVRNVLEKTSGLSWEPMVMWRACREMDPKRKGTEEETTKVKALDCLDWCEVEINLHQFF 451
Query: 303 KGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAA 362
+GY EGR+ ++GWPEMLKLKDWP E+ L H EFI+ LP +Y + G LN+A
Sbjct: 452 EGYLEGRMHKNGWPEMLKLKDWPPSDLFEKRLPRHNAEFIAALPFFDYTDPKSGILNLAT 511
Query: 363 KLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEK 422
+ P SL+ D+GPK Y++YG +EEL+RG+SV LH ++ D V +L H +V++P + +
Sbjct: 512 RFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDISDAVNVLTHTAKVEIPPVKYQN 571
Query: 423 IQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVETG 482
I+ +K G + S ++ N KS + DE +D +
Sbjct: 572 IKVHQKKYAEAML----QKQQYSGQVKEAS----ELEN----KSMKEVDESKKDLK-DKA 618
Query: 483 TAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRP-DGVTND 541
EE++ S R +G S +EK D + V +E ++E D + DG TN+
Sbjct: 619 ANEEQSNNSSRPSG-SGEAEKVIISKE-DNPTQPAVSTSVESIQEQKLDAPKETDGNTNE 676
Score = 454 (164.9 bits), Expect = 1.8e-129, Sum P(2) = 1.8e-129
Identities = 87/172 (50%), Positives = 122/172 (70%)
Query: 485 EEKTVKSERLNGYSDVSEKT-HPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFV 543
E+K + +G ++ K H GA WD+FRR+DVPKLI++L+ H +F + + V
Sbjct: 661 EQKLDAPKETDGNTNERSKAVHGGAVWDIFRREDVPKLIQFLKRHEHEFRHFNNEPLESV 720
Query: 544 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLD 603
HP++ + ++L+ K++LKEEF +EPW+FEQHLGEAVFIPAGCP QVRN QS +++ LD
Sbjct: 721 IHPIHDQTMFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALD 780
Query: 604 FLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLV 655
F+ PESV E +RL +E R LP DH + LE+ KI+LYAASSAI+EV+ L+
Sbjct: 781 FVAPESVEECLRLTQEFRRLPKDHSSSEDKLELKKIALYAASSAIREVKGLM 832
>TAIR|locus:2008875 [details] [associations]
symbol:AT1G11950 "AT1G11950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG305537 KO:K15601 EMBL:AB493451 IPI:IPI00542320
RefSeq:NP_172659.3 UniGene:At.42102 ProteinModelPortal:C0SUU8
PRIDE:C0SUU8 EnsemblPlants:AT1G11950.1 GeneID:837747
KEGG:ath:AT1G11950 TAIR:At1g11950 HOGENOM:HOG000243122 OMA:NHCATSI
PhylomeDB:C0SUU8 ProtClustDB:CLSN2914506 Genevestigator:C0SUU8
Uniprot:C0SUU8
Length = 875
Score = 730 (262.0 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 161/431 (37%), Positives = 240/431 (55%)
Query: 1 MIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLR---GNEIDLARAK 57
+I+ R++ ++ HL L+ A+LP +K++ + Q E+E E K++ +++D++ +
Sbjct: 254 LIETSKRKLDKYERFYHLRFLIVAMLPFLKKLCKAQDQEIETEAKVQDSMASQVDISESL 313
Query: 58 LSADEQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTE 117
S +E++ CN C I+D HR C C Y+LCL+CCQ++R S + E + T
Sbjct: 314 CSNEERVFCNHCATSIVDLHRSCPKCSYELCLNCCQEIRGGWLS-DRPECQLQFEYRGTR 372
Query: 118 NA-SEQVKTSKLRLNLLE-KFPG--WKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWV 173
E + S ++ E K P W A+ +GSI C P E GGCG L L RI + W+
Sbjct: 373 YIHGEAAEPSSSSVSEDETKTPSIKWNADENGSIRCAPKELGGCGDSVLELKRILPVTWM 432
Query: 174 AKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYA-HREDRDGNFLYCPSSHDI-RSEG 231
+ L + E ++ + + S S+ + A R+ N+LY P S D+ + E
Sbjct: 433 SDLEQKAETFLASYSIKPPMSYCRCSSDMSSMKRKAASRDGSSDNYLYSPDSLDVLKQEE 492
Query: 232 IGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDW 291
+ +F++HW KGEPVIV+ ++++ W+P +WR + E D VKAIDCL
Sbjct: 493 LLHFQEHWSKGEPVIVRNALNNTAGLSWEPMVMWRALCENVDSAISSNMSDVKAIDCLAN 552
Query: 292 SEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 351
EV I F +GYS+GR E+ WPEMLKLKDWP E L H EFIS LP EY
Sbjct: 553 CEVKINTLCFFEGYSKGRTYENFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYS 612
Query: 352 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 411
R G LN+A KLP L+ D+GPK Y++YGT +EL RG+SV LH +M D V +L+H
Sbjct: 613 DPRSGILNIATKLPEGLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTA 672
Query: 412 EVKLPTTEDEK 422
EV L +E+++
Sbjct: 673 EVTL--SEEQR 681
Score = 443 (161.0 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 93/203 (45%), Positives = 134/203 (66%)
Query: 457 DVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQ 516
D+ +H +++ E E+ E G+E EE+ V S+ + Y + S GA WD+F+R+
Sbjct: 686 DLKQKHKQQN---EKELQEQNGLE----EEEVV-SDEIVVYDETS-----GALWDIFKRE 732
Query: 517 DVPKLIEYLREHWTDFGRP--DGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFE 574
DVPKL EYLR+H +F VT V HP++ + +L +HKRKLK EFG+EPW+F
Sbjct: 733 DVPKLEEYLRKHCIEFRHTYCSRVTK--VYHPIHDQSYFLTVEHKRKLKAEFGIEPWTFV 790
Query: 575 QHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVL 634
Q LGEAVFIPAGCP QVRNL+S ++ +DF+ PE++ E +RL +E R LP +H+A+ L
Sbjct: 791 QKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKNHKAREDKL 850
Query: 635 EVGKISLYAASSAIKEVQKLVLD 657
E+ K+ +YA A+KEV+ L+LD
Sbjct: 851 EIKKMVIYAVEQALKEVETLLLD 873
>TAIR|locus:2027109 [details] [associations]
symbol:AT1G62310 "AT1G62310" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
ProtClustDB:CLSN2914506 EMBL:AB493515 IPI:IPI00545153
RefSeq:NP_176421.1 UniGene:At.36279 UniGene:At.68585
ProteinModelPortal:C0SV12 SMR:C0SV12 PRIDE:C0SV12
EnsemblPlants:AT1G62310.1 GeneID:842529 KEGG:ath:AT1G62310
TAIR:At1g62310 OMA:LANCEVE PhylomeDB:C0SV12 Genevestigator:C0SV12
Uniprot:C0SV12
Length = 883
Score = 745 (267.3 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 177/497 (35%), Positives = 255/497 (51%)
Query: 1 MIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQCSEVELEKKLRG---NEIDLARAK 57
+I+ RE+ ++ HL L++ +LP + ++ Q E+E E ++G +E+++ A
Sbjct: 270 LIETSKRELAKSERRHHLQYLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEITAAI 329
Query: 58 LSADEQMCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKE-EFSENDRIQDT 116
DE++ C+ C I+D HR C C Y+LCL CCQ++RE S S E +F DR
Sbjct: 330 SYTDERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIREGSLSERPEMKFHYVDRGHRY 389
Query: 117 ENASEQVKTS-KLRLNLLEKFPG---WKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNW 172
+ + + S E P W +GSI C P + GGCG R L L RI + W
Sbjct: 390 MHGLDAAEPSLSSTFEDEEANPSDAKWSLGENGSITCAPEKLGGCGERMLELRRILPLTW 449
Query: 173 VAKLVKNVEEMVSGCKVCDSETLLNT--GSYDHSLCQY-AHREDRDGNFLYCPSSHDI-R 228
++ L E +S + S +LN S + L + A R N+L+CP S + +
Sbjct: 450 MSDLEHKAETFLSSYNI--SPRMLNCRCSSLETELTRKSASRTTSSDNYLFCPESLGVLK 507
Query: 229 SEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDC 288
E + +F++HW KGEPVIV+ D++ W+P +WR + E + + E VKAIDC
Sbjct: 508 EEELLHFQEHWAKGEPVIVRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAIDC 567
Query: 289 LDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLL 348
L EV+I +F +GYS+GR E+ WPEMLKLKDWP E+ L H EFIS LP
Sbjct: 568 LANCEVEINTRQFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQ 627
Query: 349 EYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLV 408
EY R G LN+A KLP ++ D+GPK Y++YG +EL RG+SV LH +M D V +L
Sbjct: 628 EYSDPRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILT 687
Query: 409 HMGEVKLPTTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNN-EHVEKSA 467
H EV T E+I +K S E D N E E+
Sbjct: 688 HTAEV---TLSQEQISSVKALKQKHKLQNKVDKQSTE-----------DCNEKEEEEEEE 733
Query: 468 TDEDEIMEDQGVETGTA 484
+ EI ++ ETG+A
Sbjct: 734 LNMPEISSNENEETGSA 750
Score = 387 (141.3 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 84/188 (44%), Positives = 122/188 (64%)
Query: 456 HDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRR 515
H + N+ V+K +T++ E++ EE+ + ++ S+ +E+T A WD+FRR
Sbjct: 709 HKLQNK-VDKQSTEDCNEKEEE-------EEEELNMPEIS--SNENEETG-SALWDIFRR 757
Query: 516 QDVPKLIEYLREHWTDFGRP--DGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSF 573
+DVPKL EYLR+H +F VT V HP++ + YL +HKRKLK E+G+EPW+F
Sbjct: 758 EDVPKLEEYLRKHCKEFRHTYCSPVTK--VYHPIHDQSCYLTLEHKRKLKAEYGIEPWTF 815
Query: 574 EQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQV 633
Q LGEAVFIPAGCP QVRNL+S ++ +DF+ PE++ E +RL EE R LP +H+A+
Sbjct: 816 VQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFRQLPKNHKAREDK 875
Query: 634 LEVGKISL 641
LE +SL
Sbjct: 876 LEASLLSL 883
>TAIR|locus:2141221 [details] [associations]
symbol:B160 "AT4G21430" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001841 InterPro:IPR003347
InterPro:IPR014977 Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 KO:K15601 EMBL:AY142484 EMBL:AB493691
IPI:IPI00524203 RefSeq:NP_193874.2 UniGene:At.32630
ProteinModelPortal:Q8H1S7 PRIDE:Q8H1S7 EnsemblPlants:AT4G21430.1
GeneID:827895 KEGG:ath:AT4G21430 TAIR:At4g21430 InParanoid:Q8H1S7
OMA:NILPISH PhylomeDB:Q8H1S7 ProtClustDB:CLSN2719050
ArrayExpress:Q8H1S7 Genevestigator:Q8H1S7 Uniprot:Q8H1S7
Length = 927
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 184/548 (33%), Positives = 274/548 (50%)
Query: 131 NLLEKFPGWKANNDGSIP--CPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVS--- 185
+L K K +N P C E GC +L LS +F + +KL + EE+VS
Sbjct: 392 SLSRKVGSVKCSNGIKSPKVCKRKEVKGCS-NNLFLS-LFPLELTSKLEISAEEVVSCYE 449
Query: 186 ---------GCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFR 236
GC C ++ S H RED GNFLY P+ D + +F+
Sbjct: 450 LPEILDKYSGCPFCIGMETQSSSSDSHLKEASKTREDGTGNFLYYPTVLDFHQNNLEHFQ 509
Query: 237 KHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDI 296
HW KG PVIV+ V S S WDP ++ + KT + DC+DW EV+I
Sbjct: 510 THWSKGHPVIVRSVIKSGSSLNWDPVALFCHYLMNRNNKTGNTT------DCMDWFEVEI 563
Query: 297 ELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLG 356
+ +F G G+ + E LKL+ W S S +E H E ++ LP+ Y+ + G
Sbjct: 564 GVKQFFLGSLRGKAETNTCQERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRG 623
Query: 357 FLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLP 416
LN+AA LP D GP + +SY + EE + +SVK L F DMV +L+++ E +
Sbjct: 624 LLNIAANLPDTVQPPDFGPCLNISYRSGEEYAQPDSVKKLGFETCDMVDILLYVTETPVS 683
Query: 417 TTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMED 476
T + +I+ +P K G S D D +++ S++D +
Sbjct: 684 TNQICRIRKLMKNIGRVRSK-NPAK--GRESRFDKGKK-RDRLDDY---SSSDSESSQHC 736
Query: 477 QGVETGTAEEKTVKSERLNGYSDVSEKTHP--GAHWDVFRRQDVPKLIEYLREHWTDFGR 534
G + +E + + E N YS E GA WDVF++QDV KL+EY++ H +
Sbjct: 737 LGAKCRGSEFEGEERESCN-YSCEEESLSNTYGAQWDVFQKQDVSKLLEYIKNHSLELES 795
Query: 535 PDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNL 594
D + V+HPL + YL+ HK +LKEEF VEPWSF+Q +GEAV +PAGCP+Q+R
Sbjct: 796 MDS-SKKKVSHPLLEQSYYLDEYHKARLKEEFDVEPWSFDQCVGEAVILPAGCPYQIRKN 854
Query: 595 QSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKL 654
+S V L FL PE V E+++ +E+ LP ++K +EV K++++ S A+KE+++L
Sbjct: 855 KSCVNAVLKFLSPEHVSESIKRVKELNQLPQSVKSKANKIEVKKMAIHKISEAVKEIREL 914
Query: 655 VLDPKLGA 662
GA
Sbjct: 915 TSSDSTGA 922
Score = 190 (71.9 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 73/256 (28%), Positives = 107/256 (41%)
Query: 12 LDKLQHLYCLLSAVLPVVKQIHQIQCSEVELE-KKLRGN--EIDLARAKLSADE-QMCCN 67
+D++ HL+ + +LPV+K+I+ EVE + +K GN E + ++L++D+ Q C N
Sbjct: 301 IDRVLHLHYAVCMLLPVLKEINAEHKVEVENDAEKKEGNPAEPQIHSSELTSDDRQPCSN 360
Query: 68 ICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTS--VGKEEFSENDRIQDTENASEQVKT 125
++D R C L L+ QD + S S VG + S + E VK
Sbjct: 361 GRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLSRKVGSVKCSNGIKSPKVCKRKE-VKG 419
Query: 126 SKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVS 185
L L FP + E C Y + + + S
Sbjct: 420 CSNNL-FLSLFP---LELTSKLEISAEEVVSC-YE----------------LPEILDKYS 458
Query: 186 GCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPV 245
GC C ++ S H RED GNFLY P+ D + +F+ HW KG PV
Sbjct: 459 GCPFCIGMETQSSSSDSHLKEASKTREDGTGNFLYYPTVLDFHQNNLEHFQTHWSKGHPV 518
Query: 246 IVKQVCDSSSMSIWDP 261
IV+ V S S WDP
Sbjct: 519 IVRSVIKSGSSLNWDP 534
>UNIPROTKB|F1RH75 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:CU856219
EMBL:CU928408 Ensembl:ENSSSCT00000015658 Uniprot:F1RH75
Length = 1766
Score = 258 (95.9 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 65/184 (35%), Positives = 103/184 (55%)
Query: 465 KSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEY 524
+ A DE E+++ ++ G A+E T +R++ D EK PGA W ++ +D K+ E
Sbjct: 1584 EGAHDE-EVLKT--IDEGDADEVT--KQRIH---DGKEK--PGALWHIYAAKDAEKIREL 1633
Query: 525 LREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIP 584
LR+ + G+ + +D P++ + YL+ +++L EE+GV+ W+ Q LG+AVFIP
Sbjct: 1634 LRKVGEEQGQENPPDHD----PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIP 1689
Query: 585 AGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAA 644
AG P QV NL S +++ DF+ PE V RL +E R L N H L+V I +A
Sbjct: 1690 AGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1749
Query: 645 SSAI 648
A+
Sbjct: 1750 KDAV 1753
Score = 252 (93.8 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 88/318 (27%), Positives = 151/318 (47%)
Query: 119 ASEQVKTSKLRLNLLEKFPGWKANN--DGSIPCPPN-EYGGCGYRSLNLSRIFKMNWVAK 175
++ + + S LR +LL PG D IP PP G ++ F + +A
Sbjct: 1290 SNNKTEGSSLR-DLLHSGPGKLPQTPLDTGIPFPPVFSTSSAGVKNKASLPNFLDHIIAS 1348
Query: 176 LVKNVEEMVSGCKVCD-SETLLNTGSYDHSLC----QYAHREDRDGNFLYCPSSHDIRSE 230
+V+N + + + C+ ++T L +H DG L C HD ++
Sbjct: 1349 VVENKKTSDAAKRACNLTDTQKEVKEMVMGLNVLDPHTSHSWLCDGRLL-C--LHDPSNK 1405
Query: 231 GIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCL 289
FR+ W +G+PV+V V +W P E ++ D++ V ++C
Sbjct: 1406 NNWKIFRECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCR 1455
Query: 290 DWSEV-DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKL 345
+ + + D+++ +F G+ R+R EDG P +LKLKDWP + + + + L
Sbjct: 1456 NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENL 1515
Query: 346 PLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVY 405
PL EY R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V
Sbjct: 1516 PLPEYT-KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVN 1574
Query: 406 LLVHMGEVKLPTTEDEKI 423
++V++G + + DE++
Sbjct: 1575 VMVYVG-IPIEGAHDEEV 1591
Score = 70 (29.7 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 31 QIHQIQCSEVELEKKLRGNE-IDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCL 89
Q Q+ SE E + ++ + RA E C++C + + H C C + +CL
Sbjct: 1003 QFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREM--CDVCETTLFNIHWVCRKCGFGVCL 1060
Query: 90 SCCQDLREASTSVGKEEFSEND 111
C + LR++ EE + +
Sbjct: 1061 DCYR-LRKSRPRSETEEMGDEE 1081
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 236 RKHWVKGEPVIVKQVCDSSSMSIWDP 261
RK ++ E + Q D +M++W P
Sbjct: 955 RKGVLRVEGFLSPQQSDPDAMNLWIP 980
>UNIPROTKB|Q7LBC6 [details] [associations]
symbol:KDM3B "Lysine-specific demethylase 3B" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 EMBL:CH471062 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 eggNOG:NOG305537 KO:K15601
EMBL:AF251039 EMBL:AF338242 EMBL:AB029005 EMBL:AC104116
EMBL:AC113403 EMBL:BC000539 EMBL:BC001202 EMBL:BC146788
IPI:IPI00298935 IPI:IPI00748132 IPI:IPI00749486 RefSeq:NP_057688.2
UniGene:Hs.483486 ProteinModelPortal:Q7LBC6 IntAct:Q7LBC6
MINT:MINT-1195273 STRING:Q7LBC6 PhosphoSite:Q7LBC6 DMDM:308153456
PaxDb:Q7LBC6 PRIDE:Q7LBC6 Ensembl:ENST00000314358
Ensembl:ENST00000394866 GeneID:51780 KEGG:hsa:51780 UCSC:uc003lcy.1
UCSC:uc010jew.1 CTD:51780 GeneCards:GC05P137688 HGNC:HGNC:1337
HPA:HPA016610 MIM:609373 neXtProt:NX_Q7LBC6 PharmGKB:PA25918
InParanoid:Q7LBC6 OMA:IICKRLR OrthoDB:EOG4W9J32 GenomeRNAi:51780
NextBio:55912 ArrayExpress:Q7LBC6 Bgee:Q7LBC6 CleanEx:HS_JMJD1B
Genevestigator:Q7LBC6 GermOnline:ENSG00000120733 Uniprot:Q7LBC6
Length = 1761
Score = 259 (96.2 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 65/186 (34%), Positives = 104/186 (55%)
Query: 463 VEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLI 522
+ + A DE E+++ ++ G A+E T +R++ D EK PGA W ++ +D K+
Sbjct: 1577 IGEGAHDE-EVLKT--IDEGDADEVT--KQRIH---DGKEK--PGALWHIYAAKDAEKIR 1626
Query: 523 EYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF 582
E LR+ + G+ + +D P++ + YL+ +++L EE+GV+ W+ Q LG+AVF
Sbjct: 1627 ELLRKVGEEQGQENPPDHD----PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVF 1682
Query: 583 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLY 642
IPAG P QV NL S +++ DF+ PE V RL +E R L N H L+V I +
Sbjct: 1683 IPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYH 1742
Query: 643 AASSAI 648
A A+
Sbjct: 1743 AVKDAV 1748
Score = 248 (92.4 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 87/306 (28%), Positives = 145/306 (47%)
Query: 119 ASEQVKTSKLRLNLLEKFPGWKANN--DGSIPCPPN-EYGGCGYRSLNLSRIFKMNWVAK 175
++ + + S LR +LL PG D IP PP G +S F + +A
Sbjct: 1284 SNNKTEGSSLR-DLLHSGPGKLPQTPLDTGIPFPPVFSTSSAGVKSKASLPNFLDHIIAS 1342
Query: 176 LVKNVEEMVSGCKVCD-SETLLNTGSYDHSLC----QYAHREDRDGNFLYCPSSHDIRSE 230
+V+N + + + C+ ++T L +H DG L C HD ++
Sbjct: 1343 VVENKKTSDASKRACNLTDTQKEVKEMVMGLNVLDPHTSHSWLCDGRLL-C--LHDPSNK 1399
Query: 231 GIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCL 289
FR+ W +G+PV+V V +W P E ++ D++ V ++C
Sbjct: 1400 NNWKIFRECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCR 1449
Query: 290 DWSEV-DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKL 345
+ + + D+++ +F G+ R+R EDG P +LKLKDWP + + + + L
Sbjct: 1450 NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENL 1509
Query: 346 PLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVY 405
PL EY R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V
Sbjct: 1510 PLPEYT-KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVN 1568
Query: 406 LLVHMG 411
++V++G
Sbjct: 1569 VMVYVG 1574
Score = 70 (29.7 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 31 QIHQIQCSEVELEKKLRGNE-IDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCL 89
Q Q+ SE E + ++ + RA E C++C + + H C C + +CL
Sbjct: 997 QFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREM--CDVCETTLFNIHWVCRKCGFGVCL 1054
Query: 90 SCCQDLREASTSVGKEEFSEND 111
C + LR++ EE + +
Sbjct: 1055 DCYR-LRKSRPRSETEEMGDEE 1075
Score = 37 (18.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 236 RKHWVKGEPVIVKQVCDSSSMSIWDP 261
RK ++ E + Q D +M++W P
Sbjct: 949 RKGVLRVEGFLSPQQSDPDAMNLWIP 974
Score = 37 (18.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 98 ASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPC 149
AS K+ + R + + ++VK + LN+L+ DG + C
Sbjct: 1341 ASVVENKKTSDASKRACNLTDTQKEVKEMVMGLNVLDPHTSHSWLCDGRLLC 1392
>UNIPROTKB|E1BE97 [details] [associations]
symbol:LOC100848816 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 KO:K15601 OMA:IICKRLR
EMBL:DAAA02020398 IPI:IPI00825479 RefSeq:XP_003582470.1
RefSeq:XP_003586349.1 Ensembl:ENSBTAT00000013278 GeneID:100848816
KEGG:bta:100848816 Uniprot:E1BE97
Length = 1759
Score = 259 (96.2 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 65/186 (34%), Positives = 104/186 (55%)
Query: 463 VEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLI 522
+ + A DE E+++ ++ G A+E T +R++ D EK PGA W ++ +D K+
Sbjct: 1575 IGEGAHDE-EVLKT--IDEGDADEVT--KQRIH---DGKEK--PGALWHIYAAKDAEKIR 1624
Query: 523 EYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF 582
E LR+ + G+ + +D P++ + YL+ +++L EE+GV+ W+ Q LG+AVF
Sbjct: 1625 ELLRKVGEEQGQENPPDHD----PIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVF 1680
Query: 583 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLY 642
IPAG P QV NL S +++ DF+ PE V RL +E R L N H L+V I +
Sbjct: 1681 IPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYH 1740
Query: 643 AASSAI 648
A A+
Sbjct: 1741 AVKDAV 1746
Score = 245 (91.3 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 86/306 (28%), Positives = 145/306 (47%)
Query: 119 ASEQVKTSKLRLNLLEKFPGWKANN--DGSIPCPPN-EYGGCGYRSLNLSRIFKMNWVAK 175
++ + + S LR +LL PG D IP PP G ++ F + +A
Sbjct: 1282 SNNKTEGSSLR-DLLHSGPGKLPQTPLDTGIPFPPVFSTSSAGVKNKASLPNFLDHIIAS 1340
Query: 176 LVKNVEEMVSGCKVCD-SETLLNTGSYDHSLC----QYAHREDRDGNFLYCPSSHDIRSE 230
+V+N + + + C+ ++T L +H DG L C HD ++
Sbjct: 1341 VVENKKTSDAAKRACNLTDTQKEVKEMVMGLNVLDPHTSHSWLCDGRLL-C--LHDPSNK 1397
Query: 231 GIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCL 289
FR+ W +G+PV+V V +W P E ++ D++ V ++C
Sbjct: 1398 NNWKIFRECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCR 1447
Query: 290 DWSEV-DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKL 345
+ + + D+++ +F G+ R+R EDG P +LKLKDWP + + + + L
Sbjct: 1448 NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENL 1507
Query: 346 PLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVY 405
PL EY R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V
Sbjct: 1508 PLPEYT-KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVN 1566
Query: 406 LLVHMG 411
++V++G
Sbjct: 1567 VMVYVG 1572
Score = 70 (29.7 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 31 QIHQIQCSEVELEKKLRGNE-IDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCL 89
Q Q+ SE E + ++ + RA E C++C + + H C C + +CL
Sbjct: 995 QFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREM--CDVCETTLFNIHWVCRKCGFGVCL 1052
Query: 90 SCCQDLREASTSVGKEEFSEND 111
C + LR++ EE + +
Sbjct: 1053 DCYR-LRKSRPRSETEEMGDEE 1073
Score = 37 (18.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 236 RKHWVKGEPVIVKQVCDSSSMSIWDP 261
RK ++ E + Q D +M++W P
Sbjct: 947 RKGVLRVEGFLSPQQSDPDAMNLWIP 972
>MGI|MGI:1923356 [details] [associations]
symbol:Kdm3b "KDM3B lysine (K)-specific demethylase 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 MGI:MGI:1923356 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 OrthoDB:EOG4W9J32 EMBL:AK129281
EMBL:BC031981 EMBL:BC038376 EMBL:BC060727 EMBL:BC108415
EMBL:AK018027 EMBL:AK033343 IPI:IPI00664808 IPI:IPI00757477
UniGene:Mm.277906 ProteinModelPortal:Q6ZPY7 STRING:Q6ZPY7
PhosphoSite:Q6ZPY7 PaxDb:Q6ZPY7 PRIDE:Q6ZPY7 CleanEx:MM_JMJD1B
Genevestigator:Q6ZPY7 GermOnline:ENSMUSG00000038773 Uniprot:Q6ZPY7
Length = 1562
Score = 257 (95.5 bits), Expect = 3.6e-40, Sum P(3) = 3.6e-40
Identities = 66/186 (35%), Positives = 104/186 (55%)
Query: 463 VEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLI 522
V + A DE E+++ ++ G A+E T +R++ D EK PGA W ++ +D K+
Sbjct: 1378 VGEGAHDE-EVLKT--IDEGDADEVT--KQRIH---DGKEK--PGALWHIYAAKDAEKIR 1427
Query: 523 EYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF 582
E LR+ + G+ + +D P++ + YL+ +++L EE+GV+ W+ Q LG+AVF
Sbjct: 1428 ELLRKVGEEQGQENPPDHD----PIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVF 1483
Query: 583 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLY 642
IPAG P QV NL S +++ DF+ PE V RL +E R L N H L+V I +
Sbjct: 1484 IPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYH 1543
Query: 643 AASSAI 648
A A+
Sbjct: 1544 AVKDAV 1549
Score = 243 (90.6 bits), Expect = 3.6e-40, Sum P(3) = 3.6e-40
Identities = 87/318 (27%), Positives = 148/318 (46%)
Query: 119 ASEQVKTSKLRLNLLEKFPGWKANN--DGSIPCPPNEYGGCGYRSLNLSRI-FKMNWVAK 175
++ + + S LR +LL PG D IP PP S F + +A
Sbjct: 1085 SNSKTEGSSLR-DLLHSGPGKLPQTPLDTGIPFPPVFSSSSAVAKSKASLPDFLDHIIAS 1143
Query: 176 LVKNV---EEMVSGCKVCDSETLLNTGSYDHSLCQ--YAHREDRDGNFLYCPSSHDIRSE 230
+V+N + C + D++ + + ++ +H DG L C HD ++
Sbjct: 1144 VVENKKTSDPSKRSCNLTDTQKEVKEMAMGLNVLDPHTSHSWLCDGRLL-C--LHDPSNK 1200
Query: 231 GIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCL 289
FR+ W +G+PV+V V +W P E ++ D++ V ++C
Sbjct: 1201 NNWKIFRECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCR 1250
Query: 290 DWSEV-DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKL 345
+ + + D+++ +F G+ R+R EDG P +LKLKDWP + + + + L
Sbjct: 1251 NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENL 1310
Query: 346 PLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVY 405
PL EY R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V
Sbjct: 1311 PLPEYT-KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVN 1369
Query: 406 LLVHMGEVKLPTTEDEKI 423
++V++G DE++
Sbjct: 1370 VMVYVGIPVGEGAHDEEV 1387
Score = 70 (29.7 bits), Expect = 3.6e-40, Sum P(3) = 3.6e-40
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 31 QIHQIQCSEVELEKKLRGNE-IDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCL 89
Q Q+ SE E + ++ + RA E C++C + + H C C + +CL
Sbjct: 798 QFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREM--CDVCETTLFNIHWVCRKCGFGVCL 855
Query: 90 SCCQDLREASTSVGKEEFSEND 111
C + LR++ EE + +
Sbjct: 856 DCYR-LRKSRPRSETEEMGDEE 876
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 291 WSEVDIE--LGEFIKGYSEGRVREDGWPEMLK-----LKDWPSPSASEEFLLYHKPEFIS 343
W +V E L ++G R+D P +L+ + WP+ + + L K S
Sbjct: 80 WVKVHAEDVLALLLEGSLVWAPRKD--PVLLQGTRVPVAQWPALTFTP---LVDKLGLGS 134
Query: 344 KLPLLEYIHSR-LGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEE 386
+P+ EY+ R L FL+ A + + + DV +I + + E
Sbjct: 135 VVPV-EYLVDRELRFLSDANGMHLFQMGTDVQNQILLEHAALRE 177
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 236 RKHWVKGEPVIVKQVCDSSSMSIWDP 261
RK ++ E + Q D +M++W P
Sbjct: 750 RKGVLRVEGFLSPQQSDPDAMNLWIP 775
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 98 ASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPC 149
AS K+ + R + + ++VK + LN+L+ DG + C
Sbjct: 1142 ASVVENKKTSDPSKRSCNLTDTQKEVKEMAMGLNVLDPHTSHSWLCDGRLLC 1193
>UNIPROTKB|F1NJZ2 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:AADN02028186
EMBL:AADN02028187 EMBL:AADN02028188 IPI:IPI00589441
Ensembl:ENSGALT00000012413 Uniprot:F1NJZ2
Length = 1755
Score = 254 (94.5 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 61/181 (33%), Positives = 102/181 (56%)
Query: 468 TDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLRE 527
T +DE+++ ++ G A++ T +R++ + EK PGA W ++ +D K+ E LR+
Sbjct: 1575 THDDEVLKT--IDEGDADDVT--KQRIH---EGREK--PGALWHIYAAKDAEKIRELLRK 1625
Query: 528 HWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 587
+ G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+AVFIPAG
Sbjct: 1626 VGEEQGQENPPDHD----PIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGA 1681
Query: 588 PFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSA 647
P QV NL S +++ DF+ PE V RL +E R L N H L+V I +A A
Sbjct: 1682 PHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDA 1741
Query: 648 I 648
+
Sbjct: 1742 V 1742
Score = 239 (89.2 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 68/216 (31%), Positives = 112/216 (51%)
Query: 215 DGNFLYCPSSHDIRSEGIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETAD 273
DG L C HD ++ FR+ W +G+PV+V V +W P E
Sbjct: 1381 DGRLL-C--LHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKP--------EAFS 1429
Query: 274 EKTKDENRIVKAIDCLDWSEV-DIELGEFIKGYS--EGRVR-EDGWPEMLKLKDWPSPSA 329
+ D++ V ++C + + + D+++ +F G+ R+R EDG P +LKLKDWP
Sbjct: 1430 LEFGDQD--VDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSEDGQPMVLKLKDWPPGED 1487
Query: 330 SEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDR 389
+ + + + LPL EY R G LN+A++LP Y ++ D+GPK+Y +YG DR
Sbjct: 1488 FRDMMPTRFEDLMENLPLPEYT-KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDR 1546
Query: 390 GNSVKNLHFNMPDMVYLLVHMG-EVKLPTTEDEKIQ 424
NLH ++ D V ++V++G + T +DE ++
Sbjct: 1547 RVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLK 1582
Score = 67 (28.6 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 31 QIHQIQCSEVELEKKLRGNE-IDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCL 89
Q Q+ SE E + ++ + RA E C++C + + H C C + +CL
Sbjct: 991 QFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREM--CDVCETTLFNIHWVCRKCGFGVCL 1048
Query: 90 SCCQDLREASTSVGKEEFSEND 111
C + LR+ EE + +
Sbjct: 1049 DCYR-LRKNRPRSETEEIGDEE 1069
Score = 67 (28.6 bits), Expect = 4.1e-21, Sum P(3) = 4.1e-21
Identities = 27/91 (29%), Positives = 39/91 (42%)
Query: 173 VAKLVKNVEEMVSGCKVCDSETLLNTGSYDHS-LCQYAHREDRDGNFLYCPSSHDIRSEG 231
+A ++V+EMV G V D T HS LC DG L + +
Sbjct: 1353 LADTQRDVKEMVMGLNVLDPHT-------SHSWLC--------DGRLLCLHDPSNKNNWK 1397
Query: 232 IGNFRKHWVKGEPVIVKQVCDSSSMSIWDPK 262
I FR+ W +G+PV+V V +W P+
Sbjct: 1398 I--FRECWKQGQPVLVSGVHKKLKSELWKPE 1426
Score = 39 (18.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 236 RKHWVKGEPVIVKQVCDSSSMSIWDP 261
RK ++ E + Q D +MS+W P
Sbjct: 943 RKGILRVEGFLNPQQSDPDAMSLWIP 968
Score = 37 (18.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 306 SEGRVREDGWPEMLKLKD 323
S G GWPE + D
Sbjct: 669 SVGHKTASGWPESITATD 686
>UNIPROTKB|Q5ZIX8 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000433
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00291
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 EMBL:AJ720656 IPI:IPI00821166
RefSeq:NP_001012909.1 UniGene:Gga.17648 ProteinModelPortal:Q5ZIX8
GeneID:422917 KEGG:gga:422917 CTD:55818 HOGENOM:HOG000007471
KO:K15601 OrthoDB:EOG4FFD0Z NextBio:20825473 Uniprot:Q5ZIX8
Length = 1325
Score = 252 (93.8 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 59/173 (34%), Positives = 101/173 (58%)
Query: 467 ATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLR 526
A E+E+++ ++ G ++E T+K +++ EK PGA W ++ +D K+ E+L+
Sbjct: 1144 ADQEEEVLKT--IQDGDSDELTIKR-----FTESREK--PGALWHIYAAKDTEKIREFLK 1194
Query: 527 EHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 586
+ + G+ + V +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG
Sbjct: 1195 KVAEEQGQENPVDHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAG 1250
Query: 587 CPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 636
P QV NL S +++ DF+ PE V L +E R L + +HE KLQV V
Sbjct: 1251 APHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNV 1303
Score = 234 (87.4 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 65/213 (30%), Positives = 112/213 (52%)
Query: 217 NFLYCPSSHDIRSEGIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEK 275
N L C D +E N FR+ W +G+PV+V V + +W P+ +R +E ++
Sbjct: 952 NRLLC--LQDPNNESNWNVFRECWKQGQPVMVSGVHHKLNADLWRPES-FR--KEFGQQE 1006
Query: 276 TKDENRIVKAIDCLDWSEV--DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSAS 330
V ++C +E+ +G+F G+ + R+R E+G P +LKLKDWP
Sbjct: 1007 -------VDLVNCRT-NEIITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDF 1058
Query: 331 EEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRG 390
+ + + + +PL EY R G LN+A++LP+Y ++ D+GPK+Y +YG DR
Sbjct: 1059 RDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRK 1117
Query: 391 NSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKI 423
NLH ++ D ++V++G K ++E++
Sbjct: 1118 YGTTNLHLDVSDAANVMVYVGIPKGQADQEEEV 1150
Score = 56 (24.8 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 34 QIQCSEVELEKKLRGN-EIDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCLSC 91
Q+ SE E+ + + ++ RA E C++C I + C C + +C+ C
Sbjct: 638 QLVISEKEVMSTIEPHRQVAWKRAVRGVREM--CDVCDTTIFNLRWVCSKCGFGVCVDC 694
>UNIPROTKB|E1C232 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007290
"spermatid nucleus elongation" evidence=IEA] [GO:0009755
"hormone-mediated signaling pathway" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039
GO:GO:0046293 OMA:RRLQFNK EMBL:AADN02014773 IPI:IPI00586981
Ensembl:ENSGALT00000025482 ArrayExpress:E1C232 Uniprot:E1C232
Length = 1333
Score = 234 (87.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 59/179 (32%), Positives = 101/179 (56%)
Query: 467 ATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLR 526
A E+E+++ ++ G ++E T+K +++ EK PGA W ++ +D K+ E+L+
Sbjct: 1146 ADQEEEVLKT--IQDGDSDELTIKR-----FTESREK--PGALWHIYAAKDTEKIREFLK 1196
Query: 527 EHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 586
+ + G+ + V +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG
Sbjct: 1197 KVAEEQGQENPVDHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAG 1252
Query: 587 CPFQVR------NLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 636
P Q R NL S +++ DF+ PE V L +E R L + +HE KLQV V
Sbjct: 1253 APHQARTTGTVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNV 1311
Score = 234 (87.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 65/213 (30%), Positives = 112/213 (52%)
Query: 217 NFLYCPSSHDIRSEGIGN-FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEK 275
N L C D +E N FR+ W +G+PV+V V + +W P+ +R +E ++
Sbjct: 954 NRLLC--LQDPNNESNWNVFRECWKQGQPVMVSGVHHKLNADLWRPES-FR--KEFGQQE 1008
Query: 276 TKDENRIVKAIDCLDWSEV--DIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSAS 330
V ++C +E+ +G+F G+ + R+R E+G P +LKLKDWP
Sbjct: 1009 -------VDLVNCRT-NEIITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDF 1060
Query: 331 EEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRG 390
+ + + + +PL EY R G LN+A++LP+Y ++ D+GPK+Y +YG DR
Sbjct: 1061 RDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRK 1119
Query: 391 NSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKI 423
NLH ++ D ++V++G K ++E++
Sbjct: 1120 YGTTNLHLDVSDAANVMVYVGIPKGQADQEEEV 1152
Score = 64 (27.6 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 34 QIQCSEVELEKKLRGN-EIDLARAKLSADEQMCCNICRIPIIDYHRHCGNCMYDLCLSC 91
Q+ SE E+ + + ++ RA E C++C I + H C C + +C+ C
Sbjct: 640 QLVISEKEVMSTIEPHRQVAWKRAVRGVREM--CDVCDTTIFNLHWVCSKCGFGVCVDC 696
>UNIPROTKB|E1BFC2 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:DAAA02031122
IPI:IPI00709258 RefSeq:NP_001179801.1 UniGene:Bt.52403 PRIDE:E1BFC2
Ensembl:ENSBTAT00000018069 GeneID:536073 KEGG:bta:536073
NextBio:20876880 Uniprot:E1BFC2
Length = 1320
Score = 243 (90.6 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 59/178 (33%), Positives = 100/178 (56%)
Query: 463 VEKSATD-EDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKL 521
+ K D E+E+++ ++ G ++E T+K + + EK PGA W ++ +D K+
Sbjct: 1134 IPKGQCDQEEEVLKT--IQDGDSDELTIKR-----FIEGKEK--PGALWHIYAAKDTEKI 1184
Query: 522 IEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAV 581
E+L++ + G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ V
Sbjct: 1185 REFLKKVSEEQGQENPADHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVV 1240
Query: 582 FIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 636
FIPAG P QV NL S +++ DF+ PE V L +E R L +HE KLQV V
Sbjct: 1241 FIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNV 1298
Score = 229 (85.7 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 57/193 (29%), Positives = 105/193 (54%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ +R RE +++ V ++C +E+
Sbjct: 965 FRECWKQGQPVMVSGVHHKLNTELWKPES-FR--REFGNQE-------VDLVNCRT-NEI 1013
Query: 295 --DIELGEFIKGYSE--GRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 350
+G+F G+ + R++ + P +LKLKDWP + + + ++ +PL EY
Sbjct: 1014 ITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEY 1073
Query: 351 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 410
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V++
Sbjct: 1074 TR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1132
Query: 411 GEVKLPTTEDEKI 423
G K ++E++
Sbjct: 1133 GIPKGQCDQEEEV 1145
Score = 59 (25.8 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 661 CDVCDTTIFNLHWVCPRCGFGVCVDC 686
>UNIPROTKB|Q9Y4C1 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001047 "core promoter binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007290 "spermatid nucleus elongation"
evidence=IEA] [GO:0036123 "histone H3-K9 dimethylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IDA]
[GO:0033169 "histone H3-K9 demethylation" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH471053
GO:GO:0030154 GO:GO:0030521 GO:GO:0005506 GO:GO:0007283
GO:GO:0006351 GO:GO:0016702 GO:GO:0009755 GO:GO:0033169
Pathway_Interaction_DB:ar_pathway GO:GO:0050681 EMBL:AC068288
eggNOG:NOG305537 CTD:55818 KO:K15601 OrthoDB:EOG4FFD0Z
EMBL:AB018285 EMBL:AL832150 EMBL:BX640698 EMBL:CR749581
IPI:IPI00479545 RefSeq:NP_001140160.1 RefSeq:NP_060903.2
UniGene:Hs.557425 ProteinModelPortal:Q9Y4C1 IntAct:Q9Y4C1
STRING:Q9Y4C1 PhosphoSite:Q9Y4C1 DMDM:308153659 PaxDb:Q9Y4C1
PRIDE:Q9Y4C1 Ensembl:ENST00000312912 Ensembl:ENST00000409064
Ensembl:ENST00000409556 GeneID:55818 KEGG:hsa:55818 UCSC:uc002sri.4
GeneCards:GC02P086667 H-InvDB:HIX0002238 HGNC:HGNC:20815 MIM:611512
neXtProt:NX_Q9Y4C1 PharmGKB:PA164721293 InParanoid:Q9Y4C1
BindingDB:Q9Y4C1 ChEMBL:CHEMBL1938209 ChiTaRS:KDM3A
GenomeRNAi:55818 NextBio:61002 ArrayExpress:Q9Y4C1 Bgee:Q9Y4C1
CleanEx:HS_JMJD1A Genevestigator:Q9Y4C1 GermOnline:ENSG00000115548
GO:GO:0046293 Uniprot:Q9Y4C1
Length = 1321
Score = 243 (90.6 bits), Expect = 4.3e-36, Sum P(3) = 4.3e-36
Identities = 62/192 (32%), Positives = 101/192 (52%)
Query: 456 HDVNNEHVEKSATDEDEIMEDQGVETGTAEE-----KTVK---SERLNGYSDVSEKTHPG 507
+ N H++ S D +M G+ G E+ KT++ S+ L + K PG
Sbjct: 1114 YGTTNLHLDVS--DAANVMVYVGIPKGQCEQEEEVLKTIQDGDSDELTIKRFIEGKEKPG 1171
Query: 508 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 567
A W ++ +D K+ E+L++ + G+ + +D P++ + YL+ +++L +E+G
Sbjct: 1172 ALWHIYAAKDTEKIREFLKKVSEEQGQENPADHD----PIHDQSWYLDRSLRKRLHQEYG 1227
Query: 568 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN-- 625
V+ W+ Q LG+ VFIPAG P QV NL S +++ DF+ PE V L +E R L
Sbjct: 1228 VQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTH 1287
Query: 626 -DHEAKLQVLEV 636
+HE KLQV V
Sbjct: 1288 TNHEDKLQVKNV 1299
Score = 227 (85.0 bits), Expect = 4.3e-36, Sum P(3) = 4.3e-36
Identities = 56/193 (29%), Positives = 105/193 (54%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ +R +E +++ V ++C +E+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKPES-FR--KEFGEQE-------VDLVNCRT-NEI 1014
Query: 295 --DIELGEFIKGYSE--GRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 350
+G+F G+ + R++ + P +LKLKDWP + + + ++ +PL EY
Sbjct: 1015 ITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEY 1074
Query: 351 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 410
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V++
Sbjct: 1075 TR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1133
Query: 411 GEVKLPTTEDEKI 423
G K ++E++
Sbjct: 1134 GIPKGQCEQEEEV 1146
Score = 59 (25.8 bits), Expect = 4.3e-36, Sum P(3) = 4.3e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 662 CDVCDTTIFNLHWVCPRCGFGVCVDC 687
>UNIPROTKB|E2QWU9 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:AAEX03010929
RefSeq:XP_532973.3 Ensembl:ENSCAFT00000012063 GeneID:475763
KEGG:cfa:475763 NextBio:20851540 Uniprot:E2QWU9
Length = 1322
Score = 243 (90.6 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 59/178 (33%), Positives = 100/178 (56%)
Query: 463 VEKSATD-EDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKL 521
+ K D E+E+++ ++ G ++E T+K + + EK PGA W ++ +D K+
Sbjct: 1136 IPKGQCDQEEEVLKT--IQDGDSDELTIKR-----FIEGKEK--PGALWHIYAAKDTEKI 1186
Query: 522 IEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAV 581
E+L++ + G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ V
Sbjct: 1187 REFLKKVSEEQGQENPADHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVV 1242
Query: 582 FIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 636
FIPAG P QV NL S +++ DF+ PE V L +E R L +HE KLQV V
Sbjct: 1243 FIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNV 1300
Score = 226 (84.6 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 55/193 (28%), Positives = 102/193 (52%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ + + N+ V ++C +E+
Sbjct: 967 FRECWKQGQPVMVSGVHHKLNTDLWKPESF----------RKEFGNQEVDLVNCRT-NEI 1015
Query: 295 --DIELGEFIKGYSE--GRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 350
+G+F G+ + R++ + P +LKLKDWP + + + ++ +PL EY
Sbjct: 1016 ITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEY 1075
Query: 351 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 410
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V++
Sbjct: 1076 TR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1134
Query: 411 GEVKLPTTEDEKI 423
G K ++E++
Sbjct: 1135 GIPKGQCDQEEEV 1147
Score = 59 (25.8 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 663 CDVCDTTIFNLHWVCPRCGFGVCVDC 688
Score = 38 (18.4 bits), Expect = 8.2e-34, Sum P(3) = 8.2e-34
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 155 GGCGYRSLNLSRIFKMNWVA---KLVKNVEEMVSGCKVC 190
G G+ S ++ R+ + WV+ + V + + KVC
Sbjct: 26 GDGGHDSWDVERVAEWPWVSGTIRAVSHTDVTKKDLKVC 64
>UNIPROTKB|F1SVC8 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:CU467088 EMBL:CU928755
RefSeq:XP_003124983.3 Ensembl:ENSSSCT00000009003 GeneID:100517522
KEGG:ssc:100517522 Uniprot:F1SVC8
Length = 1323
Score = 243 (90.6 bits), Expect = 5.5e-36, Sum P(3) = 5.5e-36
Identities = 59/178 (33%), Positives = 100/178 (56%)
Query: 463 VEKSATD-EDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKL 521
+ K D E+E+++ ++ G ++E T+K + + EK PGA W ++ +D K+
Sbjct: 1137 IPKGQCDQEEEVLKT--IQDGDSDELTIKR-----FIEGKEK--PGALWHIYAAKDTEKI 1187
Query: 522 IEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAV 581
E+L++ + G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ V
Sbjct: 1188 REFLKKVSEEQGQENPADHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVV 1243
Query: 582 FIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 636
FIPAG P QV NL S +++ DF+ PE V L +E R L +HE KLQV V
Sbjct: 1244 FIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNV 1301
Score = 226 (84.6 bits), Expect = 5.5e-36, Sum P(3) = 5.5e-36
Identities = 55/193 (28%), Positives = 102/193 (52%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ + + N+ V ++C +E+
Sbjct: 968 FRECWKQGQPVMVSGVHHKLNTELWKPESF----------RKEFGNQEVDLVNCRT-NEI 1016
Query: 295 --DIELGEFIKGYSE--GRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 350
+G+F G+ + R++ + P +LKLKDWP + + + ++ +PL EY
Sbjct: 1017 ITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEY 1076
Query: 351 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 410
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V++
Sbjct: 1077 TR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1135
Query: 411 GEVKLPTTEDEKI 423
G K ++E++
Sbjct: 1136 GIPKGQCDQEEEV 1148
Score = 59 (25.8 bits), Expect = 5.5e-36, Sum P(3) = 5.5e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 664 CDVCDTTIFNLHWVCPRCGFGVCVDC 689
Score = 39 (18.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 334 LLYHKPEFISKLPLLEYIHSRLG 356
+L KPE + K+ LL S++G
Sbjct: 355 ILRTKPEVVCKVGLLSSKSSQIG 377
>MGI|MGI:98847 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005506 "iron ion binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007290 "spermatid
nucleus elongation" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=ISO] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0036123 "histone H3-K9
dimethylation" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046293 "formaldehyde biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:98847 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0005506 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0001047 GO:GO:0009755
GO:GO:0033169 GO:GO:0000976 GO:GO:0051573 GO:GO:0007290
GeneTree:ENSGT00530000063039 eggNOG:NOG305537 CTD:55818 KO:K15601
OrthoDB:EOG4FFD0Z GO:GO:0046293 EMBL:AK129204 EMBL:BC026605
EMBL:BC031158 EMBL:BC031200 EMBL:BC059264 EMBL:AK144825
EMBL:AK166797 EMBL:DQ323991 IPI:IPI00460716 IPI:IPI00755968
RefSeq:NP_001033784.2 RefSeq:NP_766589.1 UniGene:Mm.260479
ProteinModelPortal:Q6PCM1 IntAct:Q6PCM1 STRING:Q6PCM1
PhosphoSite:Q6PCM1 PaxDb:Q6PCM1 PRIDE:Q6PCM1
Ensembl:ENSMUST00000065509 Ensembl:ENSMUST00000167220 GeneID:104263
KEGG:mmu:104263 UCSC:uc009cgy.2 InParanoid:Q6PCM1 OMA:RRLQFNK
NextBio:356834 Bgee:Q6PCM1 CleanEx:MM_JMJD1A Genevestigator:Q6PCM1
GermOnline:ENSMUSG00000053470 GO:GO:0036123 Uniprot:Q6PCM1
Length = 1323
Score = 240 (89.5 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 63/192 (32%), Positives = 100/192 (52%)
Query: 456 HDVNNEHVEKSATDEDEIMEDQGVETGTAE-EKTVKSERLNGYSD-------VSEKTHPG 507
+ N H++ S D +M G+ G E E+ V +G SD + K PG
Sbjct: 1116 YGTTNLHLDVS--DAANVMVYVGIPKGQCEQEEEVLRTIQDGDSDELTIKRFIEGKEKPG 1173
Query: 508 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 567
A W ++ +D K+ E+L++ + G+ + +D P++ + YL+ +++L +E+G
Sbjct: 1174 ALWHIYAAKDTEKIREFLKKVSEEQGQDNPADHD----PIHDQSWYLDRSLRKRLYQEYG 1229
Query: 568 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN-- 625
V+ W+ Q LG+ VFIPAG P QV NL S +++ DF+ PE V L +E R L
Sbjct: 1230 VQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTH 1289
Query: 626 -DHEAKLQVLEV 636
+HE KLQV V
Sbjct: 1290 TNHEDKLQVKNV 1301
Score = 220 (82.5 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 57/195 (29%), Positives = 105/195 (53%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ +R +E +++ V ++C +E+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKPES-FR--KEFGEQE-------VDLVNCRT-NEI 1014
Query: 295 --DIELGEFIKGYSE--GRVREDGW--PEMLKLKDWPSPSASEEFLLYHKPEFISKLPLL 348
+G+F G+ + R++ D P +LKLKDWP + + + ++ +PL
Sbjct: 1015 ITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 1074
Query: 349 EYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLV 408
EY R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V
Sbjct: 1075 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1133
Query: 409 HMGEVKLPTTEDEKI 423
++G K ++E++
Sbjct: 1134 YVGIPKGQCEQEEEV 1148
Score = 59 (25.8 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 662 CDVCDTTIFNLHWVCPRCGFGVCVDC 687
>RGD|708351 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005506 "iron ion
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0007290 "spermatid nucleus
elongation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0036123 "histone H3-K9 dimethylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046293 "formaldehyde biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:708351 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007283 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
eggNOG:NOG305537 CTD:55818 HOGENOM:HOG000007471 KO:K15601
EMBL:X59993 IPI:IPI00566177 PIR:S28499 RefSeq:NP_786940.1
UniGene:Rn.10541 ProteinModelPortal:Q63679 STRING:Q63679
PRIDE:Q63679 GeneID:312440 KEGG:rno:312440 UCSC:RGD:708351
NextBio:664882 ArrayExpress:Q63679 Genevestigator:Q63679
GermOnline:ENSRNOG00000007814 Uniprot:Q63679
Length = 1214
Score = 240 (89.5 bits), Expect = 7.2e-35, Sum P(3) = 7.2e-35
Identities = 66/207 (31%), Positives = 107/207 (51%)
Query: 456 HDVNNEHVEKSATDEDEIMEDQGVETGTAE-EKTVKSERLNGYSD-------VSEKTHPG 507
+ N H++ S D +M G+ G E E+ V +G SD + K PG
Sbjct: 1000 YGTTNLHLDVS--DAANVMVYVGIPKGQCEQEEEVLRTIQDGDSDELTIKRFIEGKEKPG 1057
Query: 508 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 567
A W ++ +D K+ E+L++ + G+ + +D P++ + YL+ +++L +E+G
Sbjct: 1058 ALWHIYAAKDTEKIREFLKKVSEEQGQENPADHD----PIHDQSWYLDRSLRKRLYQEYG 1113
Query: 568 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN-- 625
V+ W+ Q LG+ VFIPAG P QV NL S +++ DF+ PE V L +E R L
Sbjct: 1114 VQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTH 1173
Query: 626 -DHEAKLQVLEVGKISLYAASSAIKEV 651
+HE KLQV V ++ A + +K V
Sbjct: 1174 TNHEDKLQVKNVIYHAVKDAVAMLKAV 1200
Score = 217 (81.4 bits), Expect = 7.2e-35, Sum P(3) = 7.2e-35
Identities = 56/195 (28%), Positives = 106/195 (54%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
FR+ W +G+PV+V V + +W P+ +R +E +++ V ++C +E+
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKPES-FR--KEFGEQE-------VDLVNCRT-NEI 898
Query: 295 --DIELGEFIKGYSE--GRVR--EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLL 348
+G+F G+ + R++ ++ P +LKLKDWP + + + ++ +PL
Sbjct: 899 ITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLP 958
Query: 349 EYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLV 408
EY R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V
Sbjct: 959 EYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMV 1017
Query: 409 HMGEVKLPTTEDEKI 423
++G K ++E++
Sbjct: 1018 YVGIPKGQCEQEEEV 1032
Score = 59 (25.8 bits), Expect = 7.2e-35, Sum P(3) = 7.2e-35
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSC 91
C++C I + H C C + +C+ C
Sbjct: 546 CDVCDTTIFNLHWVCPRCGFGVCVDC 571
>FB|FBgn0037703 [details] [associations]
symbol:JHDM2 "JmjC domain-containing histone demethylase 2"
species:7227 "Drosophila melanogaster" [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0005634
"nucleus" evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0016577 "histone demethylation" evidence=ISM]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
EMBL:AE014297 GO:GO:0005634 GeneTree:ENSGT00530000063039
eggNOG:NOG305537 GO:GO:0032452 KO:K15601 EMBL:BT003787
RefSeq:NP_788611.1 UniGene:Dm.26190 MINT:MINT-1601605
EnsemblMetazoa:FBtr0082063 GeneID:41143 KEGG:dme:Dmel_CG8165
UCSC:CG8165-RA CTD:41143 FlyBase:FBgn0037703 InParanoid:Q9VHC5
OMA:SHTNHED OrthoDB:EOG4XPNWR GenomeRNAi:41143 NextBio:822388
Uniprot:Q9VHC5
Length = 854
Score = 209 (78.6 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 60/194 (30%), Positives = 101/194 (52%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
F++ W G+PV++ +V S ++ +W P+ R +K D I+CL+ + V
Sbjct: 490 FQEVWKCGQPVMISEVARSLNLDLWHPQAFCRDF----GDKPND------LINCLNGNLV 539
Query: 295 DIE-LGEFIKGYS--EGRVRED-GWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 350
+ + F +G+ R+ + G P +LKLKDWP E L + + LP+ EY
Sbjct: 540 PNQPMRHFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRFADLMKGLPMPEY 599
Query: 351 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 410
R G LN+A+ LP + D+GPK+Y +YG+ D+G + NLH ++ D V ++V++
Sbjct: 600 T-LRTGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDKGTT--NLHLDISDAVNIMVYV 656
Query: 411 GEVKLPTTEDEKIQ 424
G +P D + Q
Sbjct: 657 G---IPQDGDTRPQ 667
Score = 200 (75.5 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 506 PGAHWDVFRRQDVPKLIEYLREHWTDFG---RPDGVTNDFVTHPLYGEVVYLNGDHKRKL 562
PGA W +F +D K+ + L + G PD +D P++ + YL+ + +L
Sbjct: 695 PGALWHIFPARDADKIRDLLNRVTLEKGFRLEPD---HD----PIHDQNWYLDDKLRARL 747
Query: 563 KEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRC 622
+E+GVE Q LG+AVFIPAG P QV+NL + +++ DF+ PE++ L E R
Sbjct: 748 FKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVAEDFVSPENITHCYHLTHEFRR 807
Query: 623 LPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEL 664
L + H L++ I +A + + V D +L AEL
Sbjct: 808 LSHSHTNHEDKLQIKNIIYHAIKDCCTILTRAV-DERLNAEL 848
Score = 80 (33.2 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSCCQDLRE 97
C++C + +YH C C + +CL C +D +E
Sbjct: 243 CDVCDTTLFNYHWTCRKCGFGVCLDCVKDRKE 274
>UNIPROTKB|Q15652 [details] [associations]
symbol:JMJD1C "Probable JmjC domain-containing histone
demethylation protein 2C" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0046966 "thyroid
hormone receptor binding" evidence=TAS] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005654 GO:GO:0006355
GO:GO:0046872 GO:GO:0007596 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046966 EMBL:EF068222 EMBL:BX537954
EMBL:AL713895 EMBL:AL590502 EMBL:AL607128 EMBL:AC022022
EMBL:AK027280 EMBL:AL831917 EMBL:AB037801 EMBL:L40411
IPI:IPI00384202 IPI:IPI00902772 IPI:IPI01012411 RefSeq:NP_004232.2
RefSeq:NP_116165.1 UniGene:Hs.413416 PDB:2YPD PDBsum:2YPD
ProteinModelPortal:Q15652 IntAct:Q15652 STRING:Q15652
PhosphoSite:Q15652 DMDM:85541650 PaxDb:Q15652 PRIDE:Q15652
Ensembl:ENST00000399251 Ensembl:ENST00000399262
Ensembl:ENST00000542921 GeneID:221037 KEGG:hsa:221037
UCSC:uc001jml.3 CTD:221037 GeneCards:GC10M064926 HGNC:HGNC:12313
MIM:604503 neXtProt:NX_Q15652 PharmGKB:PA128394767 eggNOG:NOG305537
HOVERGEN:HBG079631 InParanoid:Q15652 KO:K11449 OMA:YKMKHSV
OrthoDB:EOG447FS9 ChiTaRS:JMJD1C GenomeRNAi:221037 NextBio:91161
ArrayExpress:Q15652 Bgee:Q15652 CleanEx:HS_JMJD1C
Genevestigator:Q15652 GermOnline:ENSG00000171988 Uniprot:Q15652
Length = 2540
Score = 194 (73.4 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 51/183 (27%), Positives = 88/183 (48%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
F++ W +G+P +V V ++S+W + I + D + ++C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMNISLWKAESI---SLDFGDHQAD-------LLNCKDSIIS 2231
Query: 295 DIELGEFIKGYSEGRVRE---DGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 351
+ + EF G+ E R+ G +LKLKDWPS + + + + LPL EY
Sbjct: 2232 NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 2291
Query: 352 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 411
+ G N+A+ LP + ++ D+GP++ +YG D NLH + D+V +LV++G
Sbjct: 2292 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG 2350
Query: 412 EVK 414
K
Sbjct: 2351 IAK 2353
Score = 187 (70.9 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 55/184 (29%), Positives = 94/184 (51%)
Query: 457 DVNNEHVEKSATDEDEIMEDQGVETGTAEEKT--VKSERLNGYSDVSEKTHPGAHWDVFR 514
DV N V + I+ G+ EE + +RL S++ PGA W ++
Sbjct: 2341 DVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEI-----PGALWHIYA 2395
Query: 515 RQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFE 574
+DV K+ E+L++ + G +D P+ + Y+N +++L EE+GV +
Sbjct: 2396 GKDVDKIREFLQKISKEQGLEVLPEHD----PIRDQSWYVNKKLRQRLLEEYGVRTCTLI 2451
Query: 575 QHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND--HEAKLQ 632
Q LG+A+ +PAG QV+N S +Q+ DF+ PE + E+ L +E+R L + ++ KLQ
Sbjct: 2452 QFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDDKLQ 2511
Query: 633 VLEV 636
V +
Sbjct: 2512 VKNI 2515
Score = 63 (27.2 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFS 108
C+ C + + H C C + +CL C + +E +S KE ++
Sbjct: 1846 CDACEATLFNIHWVCQKCGFVVCLDCYK-AKERKSSRDKELYA 1887
Score = 42 (19.8 bits), Expect = 7.8e-24, Sum P(3) = 7.8e-24
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 72 PIIDYHRHCGNCMYDLCLSCCQDLREASTSVG 103
P++ + G+ + DL + LR ST G
Sbjct: 2054 PLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAG 2085
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 246 IVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDE 279
++ D++S+S W ++ + T T E
Sbjct: 1398 VITSAADTTSVSSWGGSEVISSLSNTILASTSSE 1431
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 108 SENDRIQDTENASEQVKTSKLRLNLLEKFPG 138
SEN + +N+SEQ ++L+ K G
Sbjct: 381 SENSNKRIIDNSSEQKPENELKNKNTSKING 411
>MGI|MGI:1918614 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1918614
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 GeneTree:ENSGT00530000063039 CTD:221037
eggNOG:NOG305537 HOVERGEN:HBG079631 KO:K11449 OrthoDB:EOG447FS9
ChiTaRS:JMJD1C EMBL:AK173162 EMBL:AC155712 EMBL:AC156272
EMBL:AK077400 EMBL:AK082106 EMBL:AK085500 EMBL:BC068318
IPI:IPI00749954 RefSeq:NP_001229325.1 UniGene:Mm.23846
IntAct:Q69ZK6 STRING:Q69ZK6 PhosphoSite:Q69ZK6 PRIDE:Q69ZK6
Ensembl:ENSMUST00000173689 GeneID:108829 KEGG:mmu:108829
UCSC:uc007fls.2 UCSC:uc011xfo.1 HOGENOM:HOG000113130
InParanoid:Q69ZK6 NextBio:361361 Bgee:Q69ZK6 CleanEx:MM_JMJD1C
Genevestigator:Q69ZK6 GermOnline:ENSMUSG00000037876 Uniprot:Q69ZK6
Length = 2350
Score = 190 (71.9 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 450 DLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKT--VKSERLNGYSDVSEKTHPG 507
+L + DV N V + ++ G+ EE+ V +RL S++ PG
Sbjct: 2144 NLHIEASDVVNVLVYVGIAKGNGVLSKAGILKKFEEEELDDVLRKRLKDSSEI-----PG 2198
Query: 508 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 567
A W ++ +DV K+ E+L++ + G +D P+ + Y+N +++L EE+G
Sbjct: 2199 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHD----PIRDQSWYVNRKLRQRLLEEYG 2254
Query: 568 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND- 626
V + Q LG+A+ +PAG QV+N S VQ+ DF+ PE + ++ L +E+R L +
Sbjct: 2255 VRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLLKEEI 2314
Query: 627 -HEAKLQVLEV 636
++ KLQV +
Sbjct: 2315 NYDDKLQVKNI 2325
Score = 179 (68.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 51/183 (27%), Positives = 87/183 (47%)
Query: 235 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 294
F++ W +G+P +V V ++S+W + I + D + ++C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKKMNISLWKAESI---SLDFGDHQAD-------LLNCKDSIVS 2041
Query: 295 DIELGEFIKGYSEGRVRED---GWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 351
+ + EF G+ E R+ G +LKLKD PS + + +F+ LPL EY
Sbjct: 2042 NANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYC 2101
Query: 352 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 411
+ G N+A+ LP + ++ D+GP++ +YG D NLH D+V +LV++G
Sbjct: 2102 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVG 2160
Query: 412 EVK 414
K
Sbjct: 2161 IAK 2163
Score = 61 (26.5 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 66 CNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFS 108
C+ C + + H C C + CL C + +E +S KE ++
Sbjct: 1657 CDACEATLFNVHWVCRKCGFVACLDCYK-AKERKSSRDKELYA 1698
>UNIPROTKB|F1MBI2 [details] [associations]
symbol:HR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:DAAA02023404 IPI:IPI00687527
Ensembl:ENSBTAT00000015967 Uniprot:F1MBI2
Length = 1186
Score = 162 (62.1 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 44/118 (37%), Positives = 61/118 (51%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G N P G YL+ +R+L+EE+GV
Sbjct: 1051 WHVFRAQDAQRIRRFLQ-----MVCPTGAGNLEPGTP--GRC-YLDAGLRRRLREEWGVS 1102
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDH 627
W+ Q GEAV +PAG P QV+ L STV + FL PE+ + +L + LP H
Sbjct: 1103 CWTLLQAPGEAVLVPAGAPHQVQCLVSTVSVTQHFLSPETSALSAQLCHQGPSLPTAH 1160
Score = 95 (38.5 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHFNMP 401
+ LPL EY + G LN+A+ LP + + P+++ +YG RG+ KNL +
Sbjct: 952 ASLPLPEYC-AHHGKLNLASYLPPGPVLRPLEPQLWAAYGVSPH--RGHLGTKNLCVEVT 1008
Query: 402 DMVYLLVHMGEVKLPT 417
D+V +LVH E LPT
Sbjct: 1009 DLVSVLVH-AEAPLPT 1023
Score = 71 (30.1 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVK 124
CC+ C + + H C C + LC++C + G+ + Q TE ++V
Sbjct: 592 CCSHCHHGLFNTHWRCPRCSHRLCVACGR-----MAGAGRTREKAGSQGQSTEKCGQEVG 646
Query: 125 TSKLRLNLLE 134
S L L +
Sbjct: 647 HSASSLMLTQ 656
Score = 55 (24.4 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 231 GIGNFRKHWVKGEPVIVKQVCDSSSMSIW 259
G F++HW +G+PV+V + + +W
Sbjct: 855 GFHLFQEHWRQGQPVLVSGIQRTLQGHLW 883
Score = 41 (19.5 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 254 SSMSIWDPKDIWRGIRET 271
++M + +P WRG+ T
Sbjct: 39 AAMCLGEPAPFWRGVLST 56
>RGD|620634 [details] [associations]
symbol:Hr "hair growth associated" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA;ISO] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IPI]
[GO:0051291 "protein heterooligomerization" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:620634 GO:GO:0003714 GO:GO:0045892 GO:GO:0051291 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0043433 GO:GO:0042826
GO:GO:0016604 GO:GO:0000118 CTD:55806 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 OrthoDB:EOG4DBTCW
EMBL:U71293 IPI:IPI00230844 RefSeq:NP_077340.2 UniGene:Rn.41543
ProteinModelPortal:P97609 STRING:P97609 PRIDE:P97609 GeneID:60563
KEGG:rno:60563 UCSC:RGD:620634 InParanoid:P97609 NextBio:612242
Genevestigator:P97609 GermOnline:ENSRNOG00000011427 Uniprot:P97609
Length = 1181
Score = 167 (63.8 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1046 WHVFRAQDAQRIRRFLQ-----MVCPAGAGT---LEPGAPGSCYLDSGLRRRLREEWGVS 1097
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEA 629
W+ Q GEAV +PAG P QV+ L ST+ + FL PE+ + +L + LP DH
Sbjct: 1098 CWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDH-- 1155
Query: 630 KLQVLEVGKISLYAASSAIKEVQK 653
++ ++ + A A+ +Q+
Sbjct: 1156 RMLYAQMDRAVFQAVKVAVGTLQE 1179
Score = 94 (38.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHFNMP 401
S LPL EY + G LN+A+ LP + + P+++ +YG RG+ KNL +
Sbjct: 947 SSLPLPEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVS 1003
Query: 402 DMVYLLVHMGEVKLP 416
D++ +LVH E +LP
Sbjct: 1004 DLISILVH-AEAQLP 1017
Score = 76 (31.8 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 231 GIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLD 290
G F++HW +G+PV+V + + +S+W + + G T + V+ + L
Sbjct: 850 GFRLFQEHWRQGQPVLVSGIQKTLRLSLWGMEAL--G---TLGGQ-------VQTLTALG 897
Query: 291 WSE-VDIELGEFIKGYS--EGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPL 347
+ ++ F KG+S E R + D +L + P E + S LPL
Sbjct: 898 PPQPTSLDSTAFWKGFSHPEARPKLDEGSVLLLHR--PLGDKDESRV----ENLASSLPL 951
Query: 348 LEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYG 382
EY + G LN+A+ LP + + P+++ +YG
Sbjct: 952 PEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYG 985
Score = 73 (30.8 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVK 124
CC+ C + + H C +C + LC++C + GK R Q T++ +++
Sbjct: 593 CCSRCHHGLFNTHWRCSHCSHRLCVACGR-----IAGAGKNREKTGSREQRTDDCAQEAG 647
Query: 125 TSKLRLNLLEKF 136
+ L +L +F
Sbjct: 648 HAACSL-ILTQF 658
Score = 47 (21.6 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 21/66 (31%), Positives = 27/66 (40%)
Query: 92 CQDLREASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPP 151
CQD E S+S G E SE +R + AS +KL+ W + CP
Sbjct: 344 CQDSPEGSSS-GPGESSE-ERNKAGSRASPPSHHTKLKKT-------WLTRHSEQFECP- 393
Query: 152 NEYGGC 157
GGC
Sbjct: 394 ---GGC 396
>MGI|MGI:96223 [details] [associations]
symbol:Hr "hairless" species:10090 "Mus musculus" [GO:0000118
"histone deacetylase complex" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IDA] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:96223 GO:GO:0003714 GO:GO:0045892
GO:GO:0051291 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0043433 GO:GO:0016604 GO:GO:0000118 CTD:55806
eggNOG:NOG243648 HOGENOM:HOG000293150 HOVERGEN:HBG000171
OrthoDB:EOG4DBTCW EMBL:Z32675 EMBL:BC049182 IPI:IPI00123616
PIR:I48378 RefSeq:NP_068677.2 UniGene:Mm.7598
ProteinModelPortal:Q61645 SMR:Q61645 STRING:Q61645
PhosphoSite:Q61645 PRIDE:Q61645 Ensembl:ENSMUST00000022691
Ensembl:ENSMUST00000161069 GeneID:15460 KEGG:mmu:15460
UCSC:uc007uoj.1 GeneTree:ENSGT00530000063039 InParanoid:Q61645
ChiTaRS:HR NextBio:288274 Bgee:Q61645 CleanEx:MM_HR
Genevestigator:Q61645 GermOnline:ENSMUSG00000022096 Uniprot:Q61645
Length = 1182
Score = 168 (64.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1047 WHVFRAQDAQRIRRFLQ-----MVCPAGAGT---LEPGAPGSCYLDAGLRRRLREEWGVS 1098
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEA 629
W+ Q GEAV +PAG P QV+ L ST+ + FL PE+ + +L + LP DH
Sbjct: 1099 CWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDH-- 1156
Query: 630 KLQVLEVGKISLYAASSAIKEVQK 653
++ ++ + A +A+ +Q+
Sbjct: 1157 RMLYAQMDRAVFQAVKAAVGALQE 1180
Score = 94 (38.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHFNMP 401
S LPL EY + G LN+A+ LP + + P+++ +YG RG+ KNL +
Sbjct: 948 SSLPLPEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVS 1004
Query: 402 DMVYLLVHMGEVKLP 416
D++ +LVH E +LP
Sbjct: 1005 DLISILVH-AEAQLP 1018
Score = 73 (30.8 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 38/155 (24%), Positives = 70/155 (45%)
Query: 231 GIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLD 290
G F++HW +G+PV+V + + +S+W + + G T + V+ + L
Sbjct: 851 GFHLFQEHWRQGQPVLVSGIQKTLRLSLWGMEAL--G---TLGGQ-------VQTLTALG 898
Query: 291 WSE-VDIELGEFIKGYS--EGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPL 347
+ +++ F +G+S E R + D +L + AS S LPL
Sbjct: 899 PPQPTNLDSTAFWEGFSHPETRPKLDEGSVLLLHRTLGDKDASRV------QNLASSLPL 952
Query: 348 LEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYG 382
EY + G LN+A+ LP + + P+++ +YG
Sbjct: 953 PEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYG 986
Score = 71 (30.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVK 124
CC+ C + + H C +C + LC++C R A +E+ + Q T++ +++
Sbjct: 594 CCSRCHHGLFNTHWRCSHCSHRLCVACG---RIAGAGKNREKTGSQE--QHTDDCAQEAG 648
Query: 125 TSKLRLNLLEKF 136
+ L +L +F
Sbjct: 649 HAACSL-ILTQF 659
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 255 SMSIWDPKDIWRGIRETAD 273
++ + +P WRG+ T D
Sbjct: 40 ALCLGEPAPFWRGVLSTPD 58
>UNIPROTKB|F1RMB8 [details] [associations]
symbol:HR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:CT827951
Ensembl:ENSSSCT00000010539 ArrayExpress:F1RMB8 Uniprot:F1RMB8
Length = 1177
Score = 163 (62.4 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 43/117 (36%), Positives = 60/117 (51%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G N P YL+ +R+L+EE+GV
Sbjct: 1042 WHVFRAQDTQRIRRFLQ-----MVCPAGAGN---LEPGTPGSCYLDARLRRRLREEWGVS 1093
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND 626
W+ Q GEAV +PAG P QV+ L STV + FL PE+ + +L + LP D
Sbjct: 1094 CWTLLQAPGEAVLVPAGAPHQVQGLVSTVSITQHFLSPETSALSTQLCHQGPSLPPD 1150
Score = 76 (31.8 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVK 124
CC+ C + + H C C + LC++C R A +E+ + Q TE +++
Sbjct: 595 CCSRCHHGLFNTHWRCPRCSHRLCVACG---RVAGAGKAREKAGSQE--QSTEKCAQEAG 649
Query: 125 TSKLRLNLLE 134
S L L +
Sbjct: 650 HSSCSLMLTQ 659
Score = 75 (31.5 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPD 402
+ LPL EY + G LN+A+ LP + P+++ +YG + KNL + D
Sbjct: 943 ASLPLPEYC-AHHGKLNLASYLPPGPGLRPLVPQLWAAYGVSPHCGHLGT-KNLCVEVTD 1000
Query: 403 MVYLLVHMGEVKLPT 417
+V +LV E LPT
Sbjct: 1001 LVSVLVR-AEAPLPT 1014
Score = 60 (26.2 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 231 GIGNFRKHWVKGEPVIVKQVCDSSSMSIWD 260
G F++HW +G+PV+V + + +W+
Sbjct: 846 GFHLFQEHWRQGQPVLVSGIQKTLQSHLWE 875
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 99 STSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCG 158
STS+G F E +T S++ L L ++ N S+P P EY C
Sbjct: 897 STSLGSTAFWEGFSRPETRPKSDEGSVLLLHRALGDEDASRVENLAASLPLP--EY--CA 952
Query: 159 YRS-LNLS 165
+ LNL+
Sbjct: 953 HHGKLNLA 960
Score = 40 (19.1 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 70 RIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSE 109
R+ H G+ D C C +DL S G E SE
Sbjct: 323 RVGCCSSHPPAGDGGLDPCGKCQEDLERGSG--GPNESSE 360
>UNIPROTKB|O43593 [details] [associations]
symbol:HR "Protein hairless" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0051291 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0043433 GO:GO:0016604
GO:GO:0000118 EMBL:AF039196 EMBL:AJ277249 EMBL:AJ277250
EMBL:AJ277251 EMBL:AJ277252 EMBL:AJ277253 EMBL:AJ400825
EMBL:AJ400826 EMBL:AJ400827 EMBL:AJ400828 EMBL:AJ400829
EMBL:AJ400830 EMBL:AJ400831 EMBL:AJ400832 EMBL:AJ400833
EMBL:AJ400834 EMBL:AJ400835 EMBL:AJ400836 EMBL:AJ400837
EMBL:AJ277165 EMBL:BC067128 IPI:IPI00216544 IPI:IPI00292057
RefSeq:NP_005135.2 RefSeq:NP_060881.2 UniGene:Hs.272367
ProteinModelPortal:O43593 SMR:O43593 IntAct:O43593 MINT:MINT-269712
STRING:O43593 PhosphoSite:O43593 PaxDb:O43593 PRIDE:O43593
Ensembl:ENST00000312841 Ensembl:ENST00000381418 GeneID:55806
KEGG:hsa:55806 UCSC:uc003xas.3 UCSC:uc003xat.3 CTD:55806
GeneCards:GC08M022028 HGNC:HGNC:5172 MIM:146550 MIM:203655
MIM:209500 MIM:602302 neXtProt:NX_O43593 Orphanet:701
Orphanet:86819 Orphanet:444 PharmGKB:PA29443 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 InParanoid:O43593
OMA:LERAPFW OrthoDB:EOG4DBTCW PhylomeDB:O43593 GenomeRNAi:55806
NextBio:60959 ArrayExpress:O43593 Bgee:O43593 CleanEx:HS_HR
Genevestigator:O43593 GermOnline:ENSG00000168453 Uniprot:O43593
Length = 1189
Score = 157 (60.3 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 42/117 (35%), Positives = 59/117 (50%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1054 WHVFRAQDAQRIRRFLQ-----MVCPAGAG---ALEPGAPGSCYLDAGLRRRLREEWGVS 1105
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND 626
W+ Q GEAV +PAG P QV+ L STV + FL PE+ + +L + LP D
Sbjct: 1106 CWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPD 1162
Score = 83 (34.3 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHFNMP 401
+ LPL EY G LN+A+ LP + P+++ +YG RG+ KNL +
Sbjct: 955 ASLPLPEYCALH-GKLNLASYLPPGLALRPLEPQLWAAYGVSPH--RGHLGTKNLCVEVA 1011
Query: 402 DMVYLLVHMGEVKLP 416
D+V +LVH + LP
Sbjct: 1012 DLVSILVH-ADTPLP 1025
Score = 72 (30.4 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEE--FSENDRIQDTENA 119
CC+ C + + H C C + LC++C R A T +E+ F E + T+ A
Sbjct: 599 CCSRCHHGLFNTHWRCPRCSHRLCVACG---RVAGTGRAREKAGFQEQSAEECTQEA 652
Score = 59 (25.8 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 216 GNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIW 259
G L+ G F++HW +G+PV+V + + ++W
Sbjct: 843 GALLWLQEPQPCPRRGFHLFQEHWRQGQPVLVSGIQRTLQGNLW 886
Score = 42 (19.8 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 454 GGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEK 487
GGH +++ V +S E+ +++ T ++ E+
Sbjct: 508 GGHACHSQQVRRSPLG-GELQQEEDTATNSSSEE 540
Score = 41 (19.5 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 256 MSIWDPKDIWRGIRETAD 273
+ + +P WRG+ T D
Sbjct: 41 LCLGEPAPFWRGVLSTPD 58
>UNIPROTKB|F1PFJ6 [details] [associations]
symbol:HR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0003714 GO:GO:0045892
GO:GO:0016604 CTD:55806 OMA:LERAPFW GeneTree:ENSGT00530000063039
EMBL:AAEX03014381 RefSeq:XP_543256.3 Ensembl:ENSCAFT00000015345
GeneID:486130 KEGG:cfa:486130 NextBio:20859967 Uniprot:F1PFJ6
Length = 1184
Score = 153 (58.9 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 510 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 569
W VFR QD ++ +L+ P G N P YL+ +R+L+EE+GV
Sbjct: 1049 WHVFRAQDAQRIRRFLQ-----MVCPAGAGN---LEPGTPGCCYLDAGLRRRLREEWGVN 1100
Query: 570 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEE 619
W+ Q GEAV +PAG P QV+ L +TV + FL PE+ + +L +
Sbjct: 1101 CWTLLQAPGEAVLVPAGAPHQVQGLVNTVSVTQHFLSPETSALSAQLCHQ 1150
Score = 83 (34.3 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 343 SKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHFNMP 401
+ LPL EY R G LN+A+ LP + P+++ +YG RG+ KNL +
Sbjct: 950 ASLPLPEYCALR-GKLNLASYLPPGPALRPLEPQLWAAYGVSPH--RGHLGTKNLCVEVT 1006
Query: 402 DMVYLLVHMGEVKLP 416
D+V +LV E LP
Sbjct: 1007 DLVSVLVR-AEAPLP 1020
Score = 71 (30.1 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 65 CCNICRIPIIDYHRHCGNCMYDLCLSCCQ--DLREASTSVGKEEFSENDRIQDT-ENASE 121
CC+ C + + H C +C + LC++C + R G +E S + Q+ +AS
Sbjct: 596 CCSRCHRGLFNTHWKCPHCSHRLCVACGRMTGARRTRDKAGPQEESVEECPQEAGHSASS 655
Query: 122 QVKT 125
+ T
Sbjct: 656 LILT 659
Score = 60 (26.2 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 231 GIGNFRKHWVKGEPVIVKQVCDSSSMSIW 259
G F++HW +G+PV+V + + S+W
Sbjct: 853 GFHLFQEHWRQGQPVLVSGIQRTLQGSLW 881
Score = 41 (19.5 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 255 SMSIWDPKDIWRGIRETAD 273
++ + +P WRG+ T D
Sbjct: 40 ALCMGEPTPFWRGVLSTPD 58
>RGD|708458 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 RGD:708458 eggNOG:NOG305537
OrthoDB:EOG447FS9 HOGENOM:HOG000113130 EMBL:AF202265
IPI:IPI01016516 UniGene:Rn.99017 ProteinModelPortal:Q9QXL6
STRING:Q9QXL6 UCSC:RGD:708458 Genevestigator:Q9QXL6 Uniprot:Q9QXL6
Length = 122
Score = 144 (55.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 32/93 (34%), Positives = 55/93 (59%)
Query: 546 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFL 605
P+ + Y+N ++ L EE+GV + Q LG+A+ +PAG QV+N S +Q+ DF+
Sbjct: 5 PVRDQGWYVNRRPRQGLLEEYGVRACTLVQFLGDAIVLPAGTLHQVQNFHSCIQVTEDFV 64
Query: 606 FPESVGEAVRLAEEIRCLPND--HEAKLQVLEV 636
PE + ++ L +E+R L + ++ KLQV +
Sbjct: 65 SPEHLVQSFHLTQELRLLKEEINYDDKLQVKNI 97
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 691 679 0.00079 121 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 625 (66 KB)
Total size of DFA: 407 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.87u 0.10s 62.97t Elapsed: 00:00:04
Total cpu time: 62.88u 0.10s 62.98t Elapsed: 00:00:04
Start: Tue May 21 08:10:54 2013 End: Tue May 21 08:10:58 2013