BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005546
(691 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225448406|ref|XP_002271517.1| PREDICTED: uncharacterized protein LOC100265724 [Vitis vinifera]
gi|297736620|emb|CBI25491.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/646 (73%), Positives = 549/646 (84%), Gaps = 9/646 (1%)
Query: 1 MRFNFDLSEPSTDSRLS---LTPKEEVEWVPLQKHPVFSAPDAV----RNGGGKFNGAPK 53
MR+NFD+ E + TPKEEV+W+PLQ HP+F+ A G + +
Sbjct: 1 MRYNFDVPEKEEQQPRAPSPATPKEEVQWIPLQNHPIFTTATATATAASTGHPSAHRTAR 60
Query: 54 NLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISI 113
NL+AWDGASRLY+WD +C+HRIS+RLGEPDPTS+LA PSKV++ADV+LNF V RISI
Sbjct: 61 NLMAWDGASRLYFWDSVKKCIHRISIRLGEPDPTSVLADSPSKVLQADVQLNFVVDRISI 120
Query: 114 NRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHP 173
NRNGSALLL GSDGLC+MYLYGRT ++DN TIICR+VS+GSQIYF+S+NVIR LQVSWHP
Sbjct: 121 NRNGSALLLAGSDGLCIMYLYGRTSTTDN-TIICRSVSIGSQIYFNSNNVIRALQVSWHP 179
Query: 174 YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLW 233
SDTHLGILSSDSVFR+F+L+SDV PEQEYYLQPV+PG+ RNAASICPVDFSFG DHLW
Sbjct: 180 SSDTHLGILSSDSVFRIFDLSSDVGLPEQEYYLQPVDPGKSRNAASICPVDFSFGADHLW 239
Query: 234 DRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAIS 293
DRFSVF+LFSDGSIYILCPVVPFGSVYKWESILEIYNDA TFGL+S NS AV NS+LAIS
Sbjct: 240 DRFSVFILFSDGSIYILCPVVPFGSVYKWESILEIYNDAHTFGLKSANSTAVSNSNLAIS 299
Query: 294 WLEATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECE 353
WLEATFPE+A + + G+ LKAHP+ALFD+S+SLQGPLRK+C+GGE+E LAVR AECE
Sbjct: 300 WLEATFPELAHQATEGGNLSMLKAHPYALFDASLSLQGPLRKVCNGGEEEFLAVRVAECE 359
Query: 354 GRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAM 413
GRAVSFLYNLVSKDSI+VT+WSGGQLQIDALADEIQPVW PPR+RVDS DRI GLAM
Sbjct: 360 GRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWIAGSPPRVRVDSLDRILGLAM 419
Query: 414 ICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQE 473
ICE I EL VVKLDQP D T WLGHPPPLLRLA +DLALP+N ESGS+I++ +DPL+ E
Sbjct: 420 ICESIPCELSVVKLDQPPDQTFWLGHPPPLLRLAIIDLALPRNMESGSLISLFVDPLIPE 479
Query: 474 RIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLS 533
RIY +HDGGIDS+VLHFLPFTS+ GK+ET R+PSVHPVL+TCQ E+SS SP+CGFV+LS
Sbjct: 480 RIYSLHDGGIDSIVLHFLPFTSEATGKNETMRTPSVHPVLSTCQAESSSSSPICGFVALS 539
Query: 534 DSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLS 593
DSFGYSWIV VTS+QEC+V+EMK+ NLL+PV +D E K + L K+ DTP++ISKELLS
Sbjct: 540 DSFGYSWIVAVTSSQECIVLEMKSLNLLIPVHVDIE-KDISLEEPKQIDTPNVISKELLS 598
Query: 594 GPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
GPKV+ +PQ SPNLRSVAADSIEGRSTLHQYF LF ENYVEYAHKV
Sbjct: 599 GPKVVFIPQTSPNLRSVAADSIEGRSTLHQYFKLFHENYVEYAHKV 644
>gi|255587898|ref|XP_002534434.1| conserved hypothetical protein [Ricinus communis]
gi|223525302|gb|EEF27949.1| conserved hypothetical protein [Ricinus communis]
Length = 760
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/622 (69%), Positives = 495/622 (79%), Gaps = 42/622 (6%)
Query: 18 LTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRI 77
LTPKE+++WVPL HP+F+ P+NL+AWDG+SRLYYWD N QCLHRI
Sbjct: 13 LTPKEDIQWVPLTSHPLFATTTGTA----AAATPPRNLLAWDGSSRLYYWDSNKQCLHRI 68
Query: 78 SVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRT 137
S+RLG+P+PTS+LA+ PSKV+RADV +NF V+ ISIN+NG+AL L GSDGLCV+YLYGR
Sbjct: 69 SIRLGDPEPTSVLASIPSKVLRADVDINFVVNNISINKNGTALFLSGSDGLCVIYLYGRA 128
Query: 138 CSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDV 197
+ DN IICRTVSVGSQIYF+ ++VIRTLQ
Sbjct: 129 NAKDN-AIICRTVSVGSQIYFNENSVIRTLQ----------------------------- 158
Query: 198 MQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFG 257
EYYLQPVEPGR RNA+SICPVDFSFGGDHLWDRFSVF+LFSDG IYILCP+VPFG
Sbjct: 159 -----EYYLQPVEPGRSRNASSICPVDFSFGGDHLWDRFSVFILFSDGLIYILCPIVPFG 213
Query: 258 SVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKA 317
SV+K ES+LEIY+DAQTFGL+S N AV NS+ AISWLEATFPE+ E I+ D LKA
Sbjct: 214 SVHKLESVLEIYSDAQTFGLKSTNQTAVSNSNFAISWLEATFPELNDEAIERDDLLTLKA 273
Query: 318 HPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSGG 377
P+ALFD+S+ LQGPLRK+ HGGEDE AVRG +CEG A+SFLYN+VSKDSI+VT+WSGG
Sbjct: 274 RPYALFDASLCLQGPLRKV-HGGEDEYSAVRGTQCEGCAISFLYNIVSKDSILVTAWSGG 332
Query: 378 QLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWL 437
QLQIDALADEIQPVWTV PPRL VDS D I +AMICE ISGE+PVVKLDQPLDHTVWL
Sbjct: 333 QLQIDALADEIQPVWTVGSPPRLHVDSHDHILAVAMICESISGEIPVVKLDQPLDHTVWL 392
Query: 438 GHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQT 497
GHPPPLLRLA VDLALP+ ESGS ITM DPL+ E+IY VHDGGIDS++LHFLPFTSQ+
Sbjct: 393 GHPPPLLRLAIVDLALPRKMESGSKITMFADPLLPEKIYSVHDGGIDSILLHFLPFTSQS 452
Query: 498 RGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKT 557
GKDET R+PSVHP+L+T Q + S SPLCGFV+LSD+FGYSWI+GVTS QEC+V+EMKT
Sbjct: 453 CGKDETLRTPSVHPLLSTRQADNS--SPLCGFVTLSDAFGYSWIIGVTSMQECIVLEMKT 510
Query: 558 WNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASPNLRSVAADSIEG 617
W+ LL +D EKKS +KE +T DIISKELLSGPKV+LLPQASPNLRSVAADSIEG
Sbjct: 511 WDSLLLSHVDVEKKSPGSEERKEGNTLDIISKELLSGPKVVLLPQASPNLRSVAADSIEG 570
Query: 618 RSTLHQYFNLFQENYVEYAHKV 639
RS LHQYF LF ENYVEYAHKV
Sbjct: 571 RSALHQYFKLFHENYVEYAHKV 592
>gi|449463056|ref|XP_004149250.1| PREDICTED: uncharacterized protein LOC101216348, partial [Cucumis
sativus]
Length = 782
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/592 (69%), Positives = 493/592 (83%), Gaps = 7/592 (1%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRIS 112
+NL+A DGASRLY+WD CLHRIS+RLGEP+PTS+LAA PSKV++ DV+L+F V +IS
Sbjct: 22 RNLLASDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVQKIS 81
Query: 113 INRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWH 172
IN+NGSAL L+GS GLC+MYLYG + +SDN T+ICRTV VG QIY +VIRTLQVSWH
Sbjct: 82 INQNGSALALVGSGGLCIMYLYGHSSTSDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWH 141
Query: 173 PYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHL 232
PYS+ HLG+LSSDSVFRLFNL++D++QPEQEYYLQPVEPG+ +NA SICPVDFSFG DHL
Sbjct: 142 PYSNFHLGVLSSDSVFRLFNLSTDLVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHL 201
Query: 233 WDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAI 292
WD+FSVFVLFSDGSIYILCPVVPF SVYK ESILEIYNDAQ+FGL+S N AV NSSLAI
Sbjct: 202 WDKFSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSFGLKSPNPTAV-NSSLAI 260
Query: 293 SWLEATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAEC 352
SWLE TFP + Q T D GD + A P ALFD+S++LQGPLR+ C+ G++ ++++GAEC
Sbjct: 261 SWLEETFPNLVQAT-DGGDAYMIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAEC 319
Query: 353 EGRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLA 412
EGRAVS LYNL+SKDS++VT+WSGGQLQIDALADEIQPVW + PPR+RVD D I GLA
Sbjct: 320 EGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGNPPRVRVDPNDNILGLA 379
Query: 413 MICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQ 472
MICE ++ +L VKLDQPLDHTVW G PPPLLRLA VDLALPK E S+ITM D LM
Sbjct: 380 MICEVVTRKLTKVKLDQPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMD 439
Query: 473 ERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSL 532
+RIY +H+GGIDS++LHFLPFTSQ+RG+++T R+PSVHPVLNTCQG+TSSP PLCGF SL
Sbjct: 440 QRIYALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASL 499
Query: 533 SDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQI-----DSEKKSVDLGAKKERDTPDII 587
SDS GYSWI+G+T + EC+V+EMKTWNLL+PVQ+ + + + G + E + P+II
Sbjct: 500 SDSLGYSWILGITLSHECIVLEMKTWNLLVPVQVSNFLYEGKSAAAATGERNESERPEII 559
Query: 588 SKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
SK+LL GPKV+LLPQ+S +RSV ADSIEGRS LHQYF LF ENYVEYAH V
Sbjct: 560 SKDLLGGPKVVLLPQSSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAV 611
>gi|356537982|ref|XP_003537485.1| PREDICTED: uncharacterized protein LOC100801853 [Glycine max]
Length = 806
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/632 (68%), Positives = 505/632 (79%), Gaps = 16/632 (2%)
Query: 17 SLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHR 76
S TPKEEVEWVPL KHP+F+A A +NL+AWDGASRLY+WD N +CLHR
Sbjct: 20 SQTPKEEVEWVPLPKHPLFTAHGGATT-----AAASRNLLAWDGASRLYFWDSNKRCLHR 74
Query: 77 ISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGR 136
+S+RLG+PDP+S+LAA PSKV+++D L+F+V +ISINR G+A+LL GS+ L VMYLYGR
Sbjct: 75 LSLRLGDPDPSSVLAASPSKVLQSDAVLDFDVRKISINRKGTAILLFGSETLSVMYLYGR 134
Query: 137 TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASD 196
D +ICRT+++GSQ Y + N IR LQ WHPYSDTHLGILSSDSVFRLFNLA D
Sbjct: 135 ASKKD-VNLICRTITIGSQTYCTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVD 193
Query: 197 VMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPF 256
+QPEQEYYLQPVEPGR R A+S+CPVDFSFGGDHLWDRFSVF+LFS+G+IY+LCPVVPF
Sbjct: 194 PLQPEQEYYLQPVEPGRTRKASSLCPVDFSFGGDHLWDRFSVFILFSNGAIYVLCPVVPF 253
Query: 257 GSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALK 316
GS++K ES++EIYNDA TFG S NS+A NS LAISWLEA FPE+ + LK
Sbjct: 254 GSLFKCESLVEIYNDAHTFGKISANSVAASNSKLAISWLEAAFPELQNQETKGDSLSLLK 313
Query: 317 AHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSG 376
AH +ALFD+S+ LQGPLR++ G ++S+ R AECEGRAVSFLYNLVSKDSI+VT+WSG
Sbjct: 314 AHSYALFDASLVLQGPLRRVGQDGNEDSVG-RSAECEGRAVSFLYNLVSKDSILVTAWSG 372
Query: 377 GQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVW 436
GQLQIDALADEIQPVW+V PPRLRVDS D+I GLAMICE I+ + K LDH W
Sbjct: 373 GQLQIDALADEIQPVWSVGSPPRLRVDSHDQILGLAMICESIASS-SLWK----LDHNAW 427
Query: 437 LGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQ 496
LG+PPPLLRLA VDLALP+ ESG I++ ID LM ERIY +HDGGIDS+VLHFLPFTSQ
Sbjct: 428 LGNPPPLLRLAIVDLALPRKAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTSQ 487
Query: 497 TRGKDETNRSPSVHPVLNTCQ-GETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEM 555
T GKD+T ++PSVHPVLNTCQ G TS PS LCGFVSLSDSFGYSWIV +T + ECVV+EM
Sbjct: 488 TNGKDDTMKTPSVHPVLNTCQSGFTSEPS-LCGFVSLSDSFGYSWIVTITLSLECVVLEM 546
Query: 556 KTWNLLLPVQIDSEKKSVDL-GAKKERDTPDIISKELLSGPKVILLPQASPNLRSVAADS 614
K+WNLLLPV ID EKK + G K RD P IISKELLSGP+ +L+PQASP+LRSVAADS
Sbjct: 547 KSWNLLLPVSIDMEKKPISSEGESKGRDIPTIISKELLSGPREVLVPQASPSLRSVAADS 606
Query: 615 IEGRSTLHQYFNLFQENYVEYAHKVRKLYLNH 646
IEGRSTLHQYF LF E YVEYAHKV L L H
Sbjct: 607 IEGRSTLHQYFKLFHETYVEYAHKVY-LELKH 637
>gi|357461195|ref|XP_003600879.1| Nuclear pore complex protein-related protein [Medicago truncatula]
gi|355489927|gb|AES71130.1| Nuclear pore complex protein-related protein [Medicago truncatula]
Length = 874
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/640 (65%), Positives = 508/640 (79%), Gaps = 11/640 (1%)
Query: 17 SLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHR 76
S TPKEE+EW L KHP+F+ G N +NL+A+DGA+RLY WD LHR
Sbjct: 13 STTPKEELEWHQLPKHPLFTTTTTTHTASG--NSVSRNLLAYDGANRLYLWDSKNNHLHR 70
Query: 77 ISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGR 136
+S+RLG+PDPTS+LAA PSKV++ D+ L+FEV+RISINRNG+A+LL G++ LCVMYLYGR
Sbjct: 71 LSLRLGDPDPTSVLAASPSKVLQTDIVLDFEVNRISINRNGTAMLLFGNERLCVMYLYGR 130
Query: 137 TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASD 196
T D+ +ICRT+SVGSQ + +N IR L+ SWHPYSDTHLGILSSDSVFRLFNLA D
Sbjct: 131 TSKKDDVNLICRTISVGSQTHSLGNNDIRVLEASWHPYSDTHLGILSSDSVFRLFNLAVD 190
Query: 197 VMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPF 256
+++PEQEYYLQP PGR RNA+S+CPV FSFGGDHLWDRFSVFV FSDGSIY++CPVVPF
Sbjct: 191 LLEPEQEYYLQPAGPGRSRNASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVICPVVPF 250
Query: 257 GSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPAL- 315
GS+++ ES+LEIYNDA TFGL S NS+A N++ AISWLEATFPE+ + I EGD +
Sbjct: 251 GSLFQCESLLEIYNDAHTFGLMSTNSVATSNATYAISWLEATFPELQNQEI-EGDSLSFS 309
Query: 316 KAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWS 375
+A +A+FD+S+ LQGPLR++ G ++S+ R AECEGRAVSFLYN VSKDSI+VT+WS
Sbjct: 310 RARAYAVFDASLVLQGPLRRVGQSGNEDSVG-RSAECEGRAVSFLYNSVSKDSILVTAWS 368
Query: 376 GGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTV 435
GGQLQIDALADEIQPVW+V PPRLR+DS+D I GLAMICE I+ + LDH
Sbjct: 369 GGQLQIDALADEIQPVWSVGSPPRLRLDSRDDILGLAMICESIA-----CSRMEKLDHNA 423
Query: 436 WLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTS 495
WLG+PPPLLRLA VDLALP+ ESG I++ ID LM ERIY +HDGGIDS+VLHFLPFTS
Sbjct: 424 WLGNPPPLLRLAIVDLALPRRAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTS 483
Query: 496 QTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEM 555
QT GKD+T R+PSVHPVLNTCQ ++S +CGFVSLSDSFGYSWIV VT +QECVV+EM
Sbjct: 484 QTNGKDDTMRTPSVHPVLNTCQNGSASEPSICGFVSLSDSFGYSWIVAVTLSQECVVLEM 543
Query: 556 KTWNLLLPVQIDSEKKSVD-LGAKKERDTPDIISKELLSGPKVILLPQASPNLRSVAADS 614
KTW+LLLP+ ID EKK++ +G ERD IISKELLSGPK +L+P AS +LR+VAADS
Sbjct: 544 KTWDLLLPLSIDMEKKNIQSVGQSNERDIQPIISKELLSGPKEVLVPWASQSLRAVAADS 603
Query: 615 IEGRSTLHQYFNLFQENYVEYAHKVRKLYLNHIKLVLFTS 654
IEGRSTLHQYF LF E YVEYAHKV Y ++ + +T+
Sbjct: 604 IEGRSTLHQYFKLFHETYVEYAHKVGLQYHPKMRTLEWTN 643
>gi|15239202|ref|NP_196187.1| nuclear pore complex protein-like protein [Arabidopsis thaliana]
gi|9759093|dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana]
gi|332003525|gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana]
Length = 810
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/640 (63%), Positives = 493/640 (77%), Gaps = 3/640 (0%)
Query: 1 MRFNFDLSEPSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG 60
M+FNF+ +E + DSR S TPKE V WVPLQ HPVF++ + ++ P+N +AWDG
Sbjct: 1 MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60
Query: 61 ASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSAL 120
SR+YYWD LHR+S+RLGEP+P+S+LAA PSKVM+ D+++ F VS+ISIN++GSA+
Sbjct: 61 DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120
Query: 121 LLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLG 180
LL GSDG+CVMYL+GR ++ +ICR VS+GS+IY SS + I LQ SWHP SDTHLG
Sbjct: 121 LLAGSDGICVMYLFGRASVIED-NVICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 179
Query: 181 ILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
ILSSD+VFRLF+L+SD PEQEYYLQP EPGR R A+SI P DFSFGGDHLWDRF+VF+
Sbjct: 180 ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 239
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP 300
LF+DGSIYILCPVVPFGSVYKWES++EIYNDA +G++S NSLAV NSSLAI WLEATFP
Sbjct: 240 LFTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 299
Query: 301 EVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFL 360
++ ++ + +KA P+AL D+S++LQGPL K G DE AVR AEC+GRAVS L
Sbjct: 300 DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 359
Query: 361 YNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISG 420
YNLVSKDSI+VT+WS GQLQ+DAL DEIQPVW RLR++S ++I G+AMICE
Sbjct: 360 YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 419
Query: 421 ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD 480
ELPV + PLDHTVWLGHPPPLLRLA VDLALPK E GS++T+ D L+ ERIY +HD
Sbjct: 420 ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 479
Query: 481 GGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSW 540
GGIDS VLH LPFTSQ GKDE ++PSVH VL+TCQ E S+ SPL GFV LSDSFGYSW
Sbjct: 480 GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 538
Query: 541 IVGVTSTQECVVIEMKTWNLLLPVQIDSEKK-SVDLGAKKERDTPDIISKELLSGPKVIL 599
IV V S+ EC+V EMKTW+LLLP+ + ++K S KKE++ IISKELL+GPK+ +
Sbjct: 539 IVAVLSSGECIVAEMKTWDLLLPIHVSTDKTVSSSAIEKKEQENSCIISKELLAGPKIRI 598
Query: 600 LPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
P A PN RS A+S+EGRS L Y LF ENY+EYAHKV
Sbjct: 599 APHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKV 638
>gi|110737974|dbj|BAF00923.1| hypothetical protein [Arabidopsis thaliana]
Length = 810
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/640 (62%), Positives = 492/640 (76%), Gaps = 3/640 (0%)
Query: 1 MRFNFDLSEPSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG 60
M+FNF+ +E + DSR S TPKE V WVPLQ HPVF++ + ++ P+N +AWDG
Sbjct: 1 MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60
Query: 61 ASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSAL 120
SR+YYWD LHR+S+RLGEP+P+S+LAA PSKVM+ D+++ F VS+ISIN++GSA+
Sbjct: 61 DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120
Query: 121 LLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLG 180
LL GSDG+CVMYL+GR ++ +ICR VS+GS+IY SS + I LQ SWHP SDTHLG
Sbjct: 121 LLAGSDGICVMYLFGRASVIED-NVICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 179
Query: 181 ILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
ILSSD+VFRLF+L+SD PEQEYYLQP EPGR R A+SI P DFSFGGDHLWDRF+VF+
Sbjct: 180 ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 239
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP 300
LF+D SIYILCPVVPFGSVYKWES++EIYNDA +G++S NSLAV NSSLAI WLEATFP
Sbjct: 240 LFTDDSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 299
Query: 301 EVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFL 360
++ ++ + +KA P+AL D+S++LQGPL K G DE AVR AEC+GRAVS L
Sbjct: 300 DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 359
Query: 361 YNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISG 420
YNLVSKDSI+VT+WS GQLQ+DAL DEIQPVW RLR++S ++I G+AMICE
Sbjct: 360 YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 419
Query: 421 ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD 480
ELPV + PLDHTVWLGHPPPLLRLA VDLALPK E GS++T+ D L+ ERIY +HD
Sbjct: 420 ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 479
Query: 481 GGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSW 540
GGIDS VLH LPFTSQ GKDE ++PSVH VL+TCQ E S+ SPL GFV LSDSFGYSW
Sbjct: 480 GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 538
Query: 541 IVGVTSTQECVVIEMKTWNLLLPVQIDSEKK-SVDLGAKKERDTPDIISKELLSGPKVIL 599
IV V S+ EC+V EMKTW+LLLP+ + ++K S KKE++ IISKELL+GPK+ +
Sbjct: 539 IVAVLSSGECIVAEMKTWDLLLPIHVSTDKTVSSSAIEKKEQENSCIISKELLAGPKIRI 598
Query: 600 LPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
P A PN RS A+S+EGRS L Y LF ENY+EYAHKV
Sbjct: 599 APHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKV 638
>gi|297806585|ref|XP_002871176.1| hypothetical protein ARALYDRAFT_487368 [Arabidopsis lyrata subsp.
lyrata]
gi|297317013|gb|EFH47435.1| hypothetical protein ARALYDRAFT_487368 [Arabidopsis lyrata subsp.
lyrata]
Length = 810
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/640 (62%), Positives = 487/640 (76%), Gaps = 3/640 (0%)
Query: 1 MRFNFDLSEPSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG 60
MRFNF E + DSR S TPKE V WVPLQ HPVF++ + ++ P+N +AWDG
Sbjct: 1 MRFNFQEPEDTPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPTPSQRFPRNFMAWDG 60
Query: 61 ASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSAL 120
SRLYYWD LHR S+RLGEP+P+S+LAA PSKVM+ D+++ VS+ISIN++GSA+
Sbjct: 61 DSRLYYWDSRRYLLHRFSLRLGEPEPSSVLAAVPSKVMQPDLQMTISVSKISINKSGSAV 120
Query: 121 LLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLG 180
LL GSDG+CVMYL+GR ++ +ICR VS+GS+IY S + I LQ SWHP SDTHLG
Sbjct: 121 LLAGSDGICVMYLFGRASVVED-NVICRVVSIGSEIYTSGDSAINLLQASWHPDSDTHLG 179
Query: 181 ILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
ILSSD+VFRLF+L+ D PEQEYYLQP EPG R A+SI P DFSFGG+HLWDRF+VF+
Sbjct: 180 ILSSDAVFRLFDLSYDAELPEQEYYLQPGEPGSSRTASSIYPADFSFGGEHLWDRFTVFI 239
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP 300
LF+DGSIYILCPVVPFGSVYKWESI+EIY+DA +G++S NS+AV NSSLAI WLEATFP
Sbjct: 240 LFTDGSIYILCPVVPFGSVYKWESIMEIYHDANMYGVKSSNSIAVSNSSLAIEWLEATFP 299
Query: 301 EVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFL 360
++ ++ + +KAHP+AL D+S++LQGPL K +G DE AVR AEC+GRAVS L
Sbjct: 300 DLTEQGTRGENILVVKAHPYALLDASLALQGPLYKASNGDGDEDFAVREAECKGRAVSLL 359
Query: 361 YNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISG 420
YNLVSKDSI+VT+WS GQLQ+DAL DEIQPVW RLR++S ++I G+AMICE G
Sbjct: 360 YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIG 419
Query: 421 ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD 480
EL V + PLDHTVWLGHPPPLLRLA VDLALP E GS++T+ D L+ ERIY +HD
Sbjct: 420 ELTVATSNLPLDHTVWLGHPPPLLRLAMVDLALPTRREGGSLVTLFADSLLPERIYSLHD 479
Query: 481 GGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSW 540
GGIDS VLH LPFTSQ GKDE ++PSVH VL+TCQ E S+ SPL GFV LSDSFGY+W
Sbjct: 480 GGIDSTVLHSLPFTSQATGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYAW 538
Query: 541 IVGVTSTQECVVIEMKTWNLLLPVQIDSEKK-SVDLGAKKERDTPDIISKELLSGPKVIL 599
I+ V S+ EC+V EMKTW+LLLP+ + ++K S KKE+D IISKELL+GPK+ +
Sbjct: 539 IIAVLSSGECIVAEMKTWDLLLPIHVGTDKTVSSSEIEKKEQDNSCIISKELLAGPKIRI 598
Query: 600 LPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+P A P RS A+S+EGRS L Y LF ENY+EYAHKV
Sbjct: 599 VPHALPTQRSTPANSVEGRSILLDYVKLFHENYIEYAHKV 638
>gi|224101133|ref|XP_002312155.1| predicted protein [Populus trichocarpa]
gi|222851975|gb|EEE89522.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/459 (75%), Positives = 398/459 (86%), Gaps = 2/459 (0%)
Query: 182 LSSDSVF-RLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
+S D++ ++ L +DV++PEQEYYLQPVEPGR RNAASICPVDFSFGGDHLWDRFSVF+
Sbjct: 17 ISMDALLVKITPLFADVLKPEQEYYLQPVEPGRSRNAASICPVDFSFGGDHLWDRFSVFL 76
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP 300
LFSDGS+YILCP+VPFGSV+KWES+LEIY+DA+TFGL+S N +AV NS+ AISWLEATFP
Sbjct: 77 LFSDGSVYILCPIVPFGSVHKWESVLEIYSDAETFGLKSANPVAVNNSNRAISWLEATFP 136
Query: 301 EVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFL 360
E+A E+ EG LKAHP+A+FD+S+ LQGPLRK+ HGGEDE AV AECEGRA+SFL
Sbjct: 137 ELAHES-KEGGLSTLKAHPYAVFDASLCLQGPLRKVHHGGEDEDPAVSVAECEGRAISFL 195
Query: 361 YNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISG 420
Y+L SKDSI+VT+WSGGQ+QIDALADEIQPVW V PPRLRV+SQD I GLAM+CE ISG
Sbjct: 196 YDLASKDSILVTAWSGGQMQIDALADEIQPVWMVGSPPRLRVNSQDHIIGLAMLCESISG 255
Query: 421 ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD 480
ELPVVKLDQP D+TVWLGHPPPLLRLA VDLALP+ TESGS I+M +DP+M ERIY VHD
Sbjct: 256 ELPVVKLDQPHDNTVWLGHPPPLLRLAIVDLALPRKTESGSYISMFVDPVMPERIYSVHD 315
Query: 481 GGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSW 540
GGIDS+VLHFLPFTSQ+ GKDE R+PSVHPVL+TCQ E S+PSPLCGF++LSDSFGYSW
Sbjct: 316 GGIDSIVLHFLPFTSQSGGKDEMVRTPSVHPVLSTCQVENSTPSPLCGFIALSDSFGYSW 375
Query: 541 IVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILL 600
I +TS QECVV+EM+T NLLLPV +D EKKS + R+ PDIISKELL GPKV+L+
Sbjct: 376 IAVITSNQECVVLEMRTLNLLLPVHVDMEKKSETVEEWTNRNPPDIISKELLIGPKVVLV 435
Query: 601 PQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
PQ SPNLRSVAADSIEGRSTLHQY NLF ENYVEYAHKV
Sbjct: 436 PQGSPNLRSVAADSIEGRSTLHQYLNLFHENYVEYAHKV 474
>gi|326530820|dbj|BAK01208.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 880
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 308/645 (47%), Positives = 420/645 (65%), Gaps = 41/645 (6%)
Query: 10 PSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQ 69
P T + + +P +WVP+ HP F+ A+ SRLY WD
Sbjct: 89 PRTSPKRTYSP---AQWVPVSSHPAFALRGALGG---------GGAAWDAAGSRLYVWDP 136
Query: 70 NAQCLHRISVRLGEPDP------TSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLI 123
+A+ HR+SVR+ + + ++ AA PS+++ + L FE++ IS+N +GS+LLL
Sbjct: 137 SARGAHRVSVRIRDAEAERDGEEVAVEAAVPSEMLMPEKDLGFEITHISLNTDGSSLLLA 196
Query: 124 GSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILS 183
GS + VMY++ R S D TI+CRT V SQI ++++ I+ LQ SWHP+S +H G+L+
Sbjct: 197 GSHNINVMYVHER-VSEDGDTIMCRTAPVASQILPTNNDGIKVLQTSWHPFSSSHFGVLT 255
Query: 184 SDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFS 243
SD+VFRLF+L+ D+ QPEQE+YLQP+ PGR +NA+SICPV FS+G DHLWDRFSVF+LFS
Sbjct: 256 SDAVFRLFDLSFDLEQPEQEFYLQPILPGRCQNASSICPVAFSYGSDHLWDRFSVFILFS 315
Query: 244 DGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVA 303
DGSI++LCPVVPFG Y + I EIY D TFGL+S N V NS LAI WLEATFPE+
Sbjct: 316 DGSIFVLCPVVPFGCDYSKKHIEEIYEDVNTFGLKSSNPNVVTNSHLAIVWLEATFPELL 375
Query: 304 QETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNL 363
+++ D + +A A D SV+LQGPL ++C E+ L + + CEG+AV F+Y+
Sbjct: 376 RQSADSSTLMS-RARAFAPVDDSVTLQGPLCRVCE--ENNELEGKSSSCEGKAVGFVYSS 432
Query: 364 VSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELP 423
V KDS++VT+W GQLQIDALADEIQP W++ +P RL VDS RI +AMIC+ +
Sbjct: 433 VGKDSVLVTAWGSGQLQIDALADEIQPQWSIGVPTRLNVDSHGRIKSVAMICDSNPQDSS 492
Query: 424 VVKLDQPLD---------HTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQER 474
++ +P VW+GH PPLLRL+ VDLALPK T +GS +++ +DPL+ ER
Sbjct: 493 ALRSHRPSSMGSNVKSNTEAVWMGHSPPLLRLSIVDLALPK-TSNGSSLSLFLDPLVPER 551
Query: 475 IYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSD 534
Y H GG+D V LHFLPF+ + + PSVHPVL T +TSSP L GFV+++D
Sbjct: 552 FYCAHGGGLDMVTLHFLPFSY----PEMASTPPSVHPVLTTGNSDTSSPF-LSGFVAIAD 606
Query: 535 SFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSG 594
++G+ +VG+T T EC V+EMK W P+Q+D K + E T +ISKELL+G
Sbjct: 607 AYGHVQLVGITYTGECFVVEMKGWKEPTPLQLDICSKDIK---DVESSTTGMISKELLAG 663
Query: 595 PKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
P +LP +S +LRS+ DSIEG+STLH Y +F E+YVEY HKV
Sbjct: 664 PDPPILP-SSTSLRSLTPDSIEGKSTLHHYIKVFHEHYVEYGHKV 707
>gi|125549653|gb|EAY95475.1| hypothetical protein OsI_17318 [Oryza sativa Indica Group]
gi|125591573|gb|EAZ31923.1| hypothetical protein OsJ_16094 [Oryza sativa Japonica Group]
Length = 858
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/634 (48%), Positives = 421/634 (66%), Gaps = 39/634 (6%)
Query: 24 VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG-ASRLYYWDQNAQCLHRISVRLG 82
+WV L HP FS R GG+ G AWD ASRLY WD +A+ +HRI VR+
Sbjct: 75 AQWVALPSHPAFS-----RGDGGEGLGGGGGGAAWDASASRLYVWDPSARGVHRICVRVR 129
Query: 83 EP------DPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGR 136
+ D ++ AA PS+++ + L ++V+ +S+N +GS+LLL GS + ++Y++ R
Sbjct: 130 DAEAGKDGDDVAVEAAVPSEMLMPETDLGYKVTHLSLNTDGSSLLLAGSHNISILYVHER 189
Query: 137 TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASD 196
S D +ICRTV V SQI S+++ I+ LQ SWHP+S +H G+L+SD+VFRLF+L+ D
Sbjct: 190 V-SEDGDKVICRTVPVASQILPSNNDGIKVLQTSWHPFSSSHFGVLTSDAVFRLFDLSFD 248
Query: 197 VMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPF 256
+ QPEQE+YLQP+ PG+ +NA+SICPV FS+G DHLWDRFSVF+LFSDGSI++LCP+VPF
Sbjct: 249 LEQPEQEFYLQPILPGKCQNASSICPVAFSYGSDHLWDRFSVFILFSDGSIFVLCPIVPF 308
Query: 257 GSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPAL- 315
GS Y + I EIY D +FGL+S N V NS LAI+WLEATFP+++++ D AL
Sbjct: 309 GSDYNKKHIQEIYEDVNSFGLKSSNQNVVTNSRLAIAWLEATFPDLSRQPADNS---ALM 365
Query: 316 -KAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSW 374
+AHP+A D S++LQGPL ++C E+ + CEG+AV F+Y+ V KDSI+VT+W
Sbjct: 366 SRAHPYASLDDSLTLQGPLCRVCE--ENNEPESKSNSCEGKAVGFVYSSVGKDSILVTAW 423
Query: 375 SGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLD-- 432
GQLQIDALADEIQP W++ IP RL VDS +I +AMIC+ S + ++ +P
Sbjct: 424 GSGQLQIDALADEIQPQWSIGIPTRLNVDSHGQIKSVAMICDSNSEDSWAMRSYRPSSTG 483
Query: 433 -------HTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDS 485
VW+GH PPLLRLA VDLAL K T + S +++ +DPL+ ER Y H GG+D
Sbjct: 484 SNVKSNTDAVWMGHSPPLLRLAIVDLALAK-TSNDSSLSLFLDPLVPERFYCAHGGGLDM 542
Query: 486 VVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVT 545
V LHFLPF+ + + PSVHP+L T E +SP L GFV+++D++G+ +V +T
Sbjct: 543 VTLHFLPFSY----PEMASTPPSVHPILTTGNNEANSPF-LSGFVTIADAYGHVQLVSIT 597
Query: 546 STQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASP 605
EC V+EMK W P+Q+D + KS+ E T +ISKEL++GP ++P +S
Sbjct: 598 CPGECFVVEMKGWKEPTPLQLDIDSKSI---KDVESFTTGMISKELIAGPDPPIVPSSS- 653
Query: 606 NLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+LRS+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 654 SLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 687
>gi|116310117|emb|CAH67135.1| B0402A04.2 [Oryza sativa Indica Group]
Length = 854
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 305/634 (48%), Positives = 422/634 (66%), Gaps = 39/634 (6%)
Query: 24 VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG-ASRLYYWDQNAQCLHRISVRLG 82
+WV L HP FS R GG+ G AWD ASRLY WD +A+ +HRI VR+
Sbjct: 71 AQWVALPSHPAFS-----RGDGGEGLGGGGGGAAWDASASRLYVWDPSARGVHRICVRVR 125
Query: 83 EPDP------TSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGR 136
+ + ++ AA PS+++ + L ++V+ +S+N +GS+LLL GS + ++Y++ R
Sbjct: 126 DAEAGKDGEDVAVEAAVPSEMLMPETDLGYKVTHLSLNTDGSSLLLAGSHNISILYVHER 185
Query: 137 TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASD 196
S D +ICRTV V SQI S+++ I+ LQ SWHP+S +H G+L+SD+VFRLF+L+ D
Sbjct: 186 V-SEDGDKVICRTVPVASQILPSNNDGIKVLQTSWHPFSSSHFGVLTSDAVFRLFDLSFD 244
Query: 197 VMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPF 256
+ QPEQE+YLQP+ PG+ +NA+SICPV FS+G DHLWDRFSVF+LFSDGSI++LCP+VPF
Sbjct: 245 LEQPEQEFYLQPILPGKCQNASSICPVAFSYGSDHLWDRFSVFILFSDGSIFVLCPIVPF 304
Query: 257 GSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPAL- 315
GS Y + I EIY D +FGL+S N V NS LAI+WLEATFP+++++ D AL
Sbjct: 305 GSDYNKKHIQEIYEDVNSFGLKSSNQNVVTNSRLAIAWLEATFPDLSRQPADNS---ALM 361
Query: 316 -KAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSW 374
+AHP+A D S++LQGPL ++C E+ + CEG+AV F+Y+ V KDSI+VT+W
Sbjct: 362 SRAHPYASLDDSLTLQGPLCRVCE--ENNEPESKSNSCEGKAVGFVYSSVGKDSILVTAW 419
Query: 375 SGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLD-- 432
GQLQIDALADEIQP W++ IP RL VDS+ +I +AMIC+ S + ++ +P
Sbjct: 420 GSGQLQIDALADEIQPQWSIGIPTRLNVDSRGQIKSVAMICDSNSEDSWAMRSYRPSSTG 479
Query: 433 -------HTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDS 485
VW+GH PPLLRLA VDLAL K T + S +++ +DPL+ ER Y H GG+D
Sbjct: 480 SNVKSNTDAVWMGHSPPLLRLAIVDLALAK-TSNDSSLSLFLDPLVPERFYCAHGGGLDM 538
Query: 486 VVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVT 545
V LHFLPF+ + + PSVHP+L T E +SP L GFV+++D++G+ +V +T
Sbjct: 539 VTLHFLPFSY----PEMASTPPSVHPILTTGNNEANSPF-LSGFVTIADAYGHVQLVSIT 593
Query: 546 STQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASP 605
EC V+EMK W P+Q+D + KS+ E T +ISKEL++GP ++P +S
Sbjct: 594 CPGECFVVEMKGWKEPTPLQLDIDSKSIK---DVESFTTGMISKELIAGPDPPIVPSSS- 649
Query: 606 NLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+LRS+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 650 SLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 683
>gi|242074254|ref|XP_002447063.1| hypothetical protein SORBIDRAFT_06g027930 [Sorghum bicolor]
gi|241938246|gb|EES11391.1| hypothetical protein SORBIDRAFT_06g027930 [Sorghum bicolor]
Length = 846
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/655 (49%), Positives = 424/655 (64%), Gaps = 50/655 (7%)
Query: 8 SEPSTDSRLSL--TPKEE---VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG-A 61
S ST SR L TPK +WVPL HPVFS R+GG GA AWD A
Sbjct: 48 SSASTSSRTKLRPTPKRAYSPAQWVPLNSHPVFSR----RDGGS--GGA-----AWDAVA 96
Query: 62 SRLYYWDQNAQCLHRISVRLGEPDPTS------ILAAFPSKVMRADVKLNFEVSRISINR 115
SRLY WD +A HRI VR+ +PD + + AA PS+++ + L + V+ IS+N
Sbjct: 97 SRLYAWDPSACGAHRIGVRIRDPDAENGEVDVVVEAAVPSELLMPESDLGYTVTHISLNA 156
Query: 116 NGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS 175
+GS+LLL+GS L ++Y++ R S D TIICRT V SQI S S+ I+ LQ SWHP+S
Sbjct: 157 DGSSLLLVGSHNLSILYVHERV-SEDGDTIICRTAPVASQILPSDSDGIKVLQASWHPFS 215
Query: 176 DTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDR 235
+ H +LSSD+VFRLF+L+SD+ QPEQE+YLQP+ PG+ +NA++ICPV FS+G DHLWDR
Sbjct: 216 NNHFAVLSSDAVFRLFDLSSDLEQPEQEFYLQPILPGKCKNASAICPVAFSYGSDHLWDR 275
Query: 236 FSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWL 295
FSVF+LFSDGSI++LCPVVPFGS Y + I EIY D FGL+S N V NS LAI+WL
Sbjct: 276 FSVFILFSDGSIFVLCPVVPFGSDYSKKHIQEIYEDVNAFGLKSSNPNVVTNSHLAIAWL 335
Query: 296 EATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGR 355
EATFP++ ++ D + KAH +A D S++LQGPL ++C E + + CEG+
Sbjct: 336 EATFPDLLHQSTDTSFLMS-KAHAYAPVDDSLTLQGPLCRVCE--ESNESEGKNSSCEGK 392
Query: 356 AVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMIC 415
AV F+Y+ KDSI+VT+W GQLQIDALADEIQP W + +P RL VD +I +AMIC
Sbjct: 393 AVGFMYSSAGKDSILVTAWGSGQLQIDALADEIQPQWNIGVPSRLNVDPHGQIKSVAMIC 452
Query: 416 EPISGELPVVKLDQPLD---------HTVWLGHPPPLLRLATVDLALPKNTESGSIITMS 466
+ S + ++ +P VW+G+ PPLLRLA VDLALPK S +++
Sbjct: 453 DSNSQDPLALRSHRPSSTGSNMKSNIEAVWMGNSPPLLRLAIVDLALPKTPNDNS-LSLF 511
Query: 467 IDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPL 526
DPL+ ER Y H GG+D V LHFLPF+ + ++ PSVHPVL T ETSSP L
Sbjct: 512 PDPLVPERFYCAHGGGLDMVTLHFLPFSY----PEMSSTPPSVHPVLTTGNSETSSPF-L 566
Query: 527 CGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTP-- 584
GFV ++D++G+ +VG+T EC V+EMK W P+Q+D E KS K+ + P
Sbjct: 567 SGFVIIADAYGHVQLVGITCLGECFVVEMKGWKEPTPLQLDIESKST-----KDVEPPAT 621
Query: 585 DIISKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+ISKEL++GP +L +S +L+S+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 622 GMISKELIAGPDPPIL-PSSSSLKSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 675
>gi|297603323|ref|NP_001053813.2| Os04g0608400 [Oryza sativa Japonica Group]
gi|255675761|dbj|BAF15727.2| Os04g0608400, partial [Oryza sativa Japonica Group]
Length = 880
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/602 (49%), Positives = 409/602 (67%), Gaps = 34/602 (5%)
Query: 56 VAWDG-ASRLYYWDQNAQCLHRISVRLGEPDP------TSILAAFPSKVMRADVKLNFEV 108
AWD ASRLY WD +A+ +HRI VR+ + +P ++ AA PS+++ + L ++V
Sbjct: 124 AAWDASASRLYVWDPSARGVHRICVRVRDAEPGKDGDDVAVEAAVPSEMLMPETDLGYKV 183
Query: 109 SRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQ 168
+ +S+N +GS+LLL GS + ++Y++ R S D +ICRTV V SQI S+++ I+ LQ
Sbjct: 184 THLSLNTDGSSLLLAGSHNISILYVHERV-SEDGDKVICRTVPVASQILPSNNDGIKVLQ 242
Query: 169 VSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFG 228
SWHP+S +H G+L+SD+VFRLF+L+ D+ QPEQE+YLQP+ PG+ +NA+SICPV FS+G
Sbjct: 243 TSWHPFSSSHFGVLTSDAVFRLFDLSFDLEQPEQEFYLQPILPGKCQNASSICPVAFSYG 302
Query: 229 GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNS 288
DHLWDRFSVF+LFSDGSI++LCP+VPFGS Y + I EIY D +FGL+S N V NS
Sbjct: 303 SDHLWDRFSVFILFSDGSIFVLCPIVPFGSDYNKKHIQEIYEDVNSFGLKSSNQNVVTNS 362
Query: 289 SLAISWLEATFPEVAQETIDEGDPPAL--KAHPHALFDSSVSLQGPLRKICHGGEDESLA 346
LAI+WLEATFP+++++ D AL +AHP+A D S++LQGPL ++C E+
Sbjct: 363 RLAIAWLEATFPDLSRQPADNS---ALMSRAHPYASLDDSLTLQGPLCRVCE--ENNEPE 417
Query: 347 VRGAECEGRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQD 406
+ CEG+AV F+Y+ V KDSI+VT+W GQLQIDALADEIQP W++ IP RL VDS
Sbjct: 418 SKSNSCEGKAVGFVYSSVGKDSILVTAWGSGQLQIDALADEIQPQWSIGIPTRLNVDSHG 477
Query: 407 RIHGLAMICEPISGELPVVKLDQPLD---------HTVWLGHPPPLLRLATVDLALPKNT 457
+I +AMIC+ S + ++ +P VW+GH PPLLRLA VDLAL K T
Sbjct: 478 QIKSVAMICDSNSEDSWAMRSYRPSSTGSNVKSNTDAVWMGHSPPLLRLAIVDLALAK-T 536
Query: 458 ESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQ 517
+ S +++ +DPL+ ER Y H GG+D V LHFLPF+ + + PSVHP+L T
Sbjct: 537 SNDSSLSLFLDPLVPERFYCAHGGGLDMVTLHFLPFSY----PEMASTPPSVHPILTTGN 592
Query: 518 GETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGA 577
E +SP L GFV+++D++G+ +V +T EC V+EMK W P+Q+D + KS+
Sbjct: 593 NEANSPF-LSGFVTIADAYGHVQLVSITCPGECFVVEMKGWKEPTPLQLDIDSKSI---K 648
Query: 578 KKERDTPDIISKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAH 637
E T +ISKEL++GP ++P +S +LRS+ DSIEG+STLH Y +F E YVEY H
Sbjct: 649 DVESFTTGMISKELIAGPDPPIVPSSS-SLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGH 707
Query: 638 KV 639
KV
Sbjct: 708 KV 709
>gi|38567891|emb|CAE03646.2| OSJNBa0060N03.11 [Oryza sativa Japonica Group]
Length = 890
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/602 (49%), Positives = 409/602 (67%), Gaps = 34/602 (5%)
Query: 56 VAWDG-ASRLYYWDQNAQCLHRISVRLGEPDP------TSILAAFPSKVMRADVKLNFEV 108
AWD ASRLY WD +A+ +HRI VR+ + +P ++ AA PS+++ + L ++V
Sbjct: 134 AAWDASASRLYVWDPSARGVHRICVRVRDAEPGKDGDDVAVEAAVPSEMLMPETDLGYKV 193
Query: 109 SRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQ 168
+ +S+N +GS+LLL GS + ++Y++ R S D +ICRTV V SQI S+++ I+ LQ
Sbjct: 194 THLSLNTDGSSLLLAGSHNISILYVHERV-SEDGDKVICRTVPVASQILPSNNDGIKVLQ 252
Query: 169 VSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFG 228
SWHP+S +H G+L+SD+VFRLF+L+ D+ QPEQE+YLQP+ PG+ +NA+SICPV FS+G
Sbjct: 253 TSWHPFSSSHFGVLTSDAVFRLFDLSFDLEQPEQEFYLQPILPGKCQNASSICPVAFSYG 312
Query: 229 GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNS 288
DHLWDRFSVF+LFSDGSI++LCP+VPFGS Y + I EIY D +FGL+S N V NS
Sbjct: 313 SDHLWDRFSVFILFSDGSIFVLCPIVPFGSDYNKKHIQEIYEDVNSFGLKSSNQNVVTNS 372
Query: 289 SLAISWLEATFPEVAQETIDEGDPPAL--KAHPHALFDSSVSLQGPLRKICHGGEDESLA 346
LAI+WLEATFP+++++ D AL +AHP+A D S++LQGPL ++C E+
Sbjct: 373 RLAIAWLEATFPDLSRQPADNS---ALMSRAHPYASLDDSLTLQGPLCRVCE--ENNEPE 427
Query: 347 VRGAECEGRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQD 406
+ CEG+AV F+Y+ V KDSI+VT+W GQLQIDALADEIQP W++ IP RL VDS
Sbjct: 428 SKSNSCEGKAVGFVYSSVGKDSILVTAWGSGQLQIDALADEIQPQWSIGIPTRLNVDSHG 487
Query: 407 RIHGLAMICEPISGELPVVKLDQPLD---------HTVWLGHPPPLLRLATVDLALPKNT 457
+I +AMIC+ S + ++ +P VW+GH PPLLRLA VDLAL K T
Sbjct: 488 QIKSVAMICDSNSEDSWAMRSYRPSSTGSNVKSNTDAVWMGHSPPLLRLAIVDLALAK-T 546
Query: 458 ESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQ 517
+ S +++ +DPL+ ER Y H GG+D V LHFLPF+ + + PSVHP+L T
Sbjct: 547 SNDSSLSLFLDPLVPERFYCAHGGGLDMVTLHFLPFSY----PEMASTPPSVHPILTTGN 602
Query: 518 GETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGA 577
E +SP L GFV+++D++G+ +V +T EC V+EMK W P+Q+D + KS+
Sbjct: 603 NEANSPF-LSGFVTIADAYGHVQLVSITCPGECFVVEMKGWKEPTPLQLDIDSKSI---K 658
Query: 578 KKERDTPDIISKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAH 637
E T +ISKEL++GP ++P +S +LRS+ DSIEG+STLH Y +F E YVEY H
Sbjct: 659 DVESFTTGMISKELIAGPDPPIVPSSS-SLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGH 717
Query: 638 KV 639
KV
Sbjct: 718 KV 719
>gi|357168403|ref|XP_003581630.1| PREDICTED: uncharacterized protein LOC100822200 [Brachypodium
distachyon]
Length = 866
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/634 (48%), Positives = 415/634 (65%), Gaps = 43/634 (6%)
Query: 24 VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGA-SRLYYWDQNAQCLHRISVRLG 82
+WVP++ HP S VAWD A SRLY WD +A+ HRI VR+
Sbjct: 87 AQWVPIRSHPAVSLRGGGG----------GGGVAWDAAASRLYVWDPSARAAHRICVRIR 136
Query: 83 EPDP-------TSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYG 135
+ + ++ AA PS+++ + L +EV++IS+N +GS+LLL GS + V+Y++
Sbjct: 137 DAEAGKDGEEEVAVEAAVPSEMLMPEADLGYEVTQISLNTDGSSLLLAGSHNIYVLYVHE 196
Query: 136 RTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLAS 195
R S + TIICR V SQI +++N I+ LQ SWHP+S +H GIL+SD+VFRLF+L+
Sbjct: 197 R-VSENGDTIICRAAPVASQILPTNNNGIKVLQASWHPFSSSHFGILTSDAVFRLFDLSF 255
Query: 196 DVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVP 255
D+ +PEQE+YLQP+ PGR +NA+SICPV FS+G DHLWDRFSVF+LFSDGSI++LCP+VP
Sbjct: 256 DLEKPEQEFYLQPILPGRCQNASSICPVAFSYGSDHLWDRFSVFILFSDGSIFVLCPIVP 315
Query: 256 FGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPAL 315
FGS Y SI E+Y D TFGL+S N+ V NS LAI+WLEATFPE+ +++ E
Sbjct: 316 FGSDYSKRSIEELYEDVNTFGLKSSNTNVVTNSHLAIAWLEATFPELLRQSA-ETSTLMS 374
Query: 316 KAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWS 375
+A P+A D S++LQGPL ++C E+ L + + CEG+AV FLY+ KDS++VT+W
Sbjct: 375 RARPYAPVDDSLTLQGPLCRVCE--ENSELEGKSSSCEGKAVGFLYSSAGKDSVLVTAWG 432
Query: 376 GGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHT- 434
GQLQIDALADEIQP W++ P RL VDS + +AMIC+ + + P PL T
Sbjct: 433 SGQLQIDALADEIQPQWSIGFPTRLNVDSHGHLKSVAMICDS-NPQDPWALKSHPLSSTG 491
Query: 435 ---------VWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDS 485
VW+GH PPLLR+A VDLALPK T +GS +++ +DPL+ ER Y H GG+D
Sbjct: 492 SNAKSNTEAVWMGHSPPLLRVAIVDLALPK-TSNGSSLSLFLDPLVPERFYCAHGGGLDM 550
Query: 486 VVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVT 545
V LHFLPF+ + + PSVHPVL T +T+SP L GF +++D++G+ +VG+T
Sbjct: 551 VTLHFLPFSY----PEMVSTPPSVHPVLTTGNSDTNSPF-LSGFAAIADAYGHVQLVGIT 605
Query: 546 STQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASP 605
T EC V+EMK W P+Q+D K+ E T +ISKEL++GP +L +S
Sbjct: 606 YTGECFVVEMKGWKEPTPLQLDIYSKNTK---DVESSTTGMISKELIAGPDPPML-PSSS 661
Query: 606 NLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+LRS+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 662 SLRSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 695
>gi|413919461|gb|AFW59393.1| hypothetical protein ZEAMMB73_849974 [Zea mays]
Length = 848
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 307/654 (46%), Positives = 415/654 (63%), Gaps = 46/654 (7%)
Query: 8 SEPSTDSRLSLTPKEE-----VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGAS 62
S ST SR P + +WVPL HPVFS +G + AS
Sbjct: 48 SSASTSSRPKPRPAPKRAYSPAQWVPLNSHPVFSR--------RDGDGGGGDAAWDAAAS 99
Query: 63 RLYYWDQNAQCLHRISVRLGEPDP------TSILAAFPSKVMRADVKLNFEVSRISINRN 116
RLY WD +A +HRI VR +PD ++ +A PS+++ + L + V+ IS+N +
Sbjct: 100 RLYAWDPSACSVHRIGVRTRDPDAENGEVDVTVESAVPSELLTPESDLGYMVTHISLNTD 159
Query: 117 GSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSD 176
GS+LLL+GS L +MY++ R S D TIICRT + SQI S S+ I+ LQ SWHP+S+
Sbjct: 160 GSSLLLVGSHNLNIMYVHER-ISEDGDTIICRTAPIASQILPSDSDGIKVLQASWHPFSN 218
Query: 177 THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRF 236
H +L+SD+VFRLF+L+SD+ QPEQ +YLQP+ PG+ +NA++ICPV FS+G DHLWDRF
Sbjct: 219 NHFAVLTSDAVFRLFDLSSDLEQPEQGFYLQPIVPGKCQNASAICPVGFSYGSDHLWDRF 278
Query: 237 SVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLE 296
SVF+LFSDGSI++LCPVVPFGS Y + I EIY D FGL+S N V NS LAI+WLE
Sbjct: 279 SVFILFSDGSIFVLCPVVPFGSDYSKKHIQEIYEDVNAFGLKSSNPNVVTNSHLAIAWLE 338
Query: 297 ATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRA 356
ATFP++ ++ D + KAH +A D S++LQGPL +C E + + CEG+A
Sbjct: 339 ATFPDLLHQSTDTSFLMS-KAHAYAPLDDSLTLQGPLCTVC--EESNESESKSSSCEGKA 395
Query: 357 VSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICE 416
V F+Y+ KDS++VT+W G LQ+DALADEIQP W + +P RL VDS +I+ +AMIC+
Sbjct: 396 VGFMYSSAGKDSVLVTAWGSGLLQVDALADEIQPRWNIGVPSRLNVDSHGQINNVAMICD 455
Query: 417 PISGELPVVKLDQPLD---------HTVWLGHPPPLLRLATVDLALPKNTESGSIITMSI 467
S + ++ +P VW+GH PPLLRLA VDLALPK S +++
Sbjct: 456 SNSQDPLALRSHRPSSTGSNVKSNIEAVWMGHSPPLLRLAIVDLALPKTPNDNS-LSLFA 514
Query: 468 DPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLC 527
DPL+ ER Y H GG+D V LHFLPF+ + ++ PSVHPVL T ETSSP L
Sbjct: 515 DPLVPERFYCAHGGGLDMVTLHFLPFSY----PEMSSTPPSVHPVLTTGNSETSSPF-LS 569
Query: 528 GFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTP--D 585
GFV+++D++G+ + G+T EC V+EMK W P+Q+D E K V K+ + P
Sbjct: 570 GFVTIADAYGHVQLAGITCLGECFVVEMKGWKEPAPLQLDLESKIV-----KDVEPPATG 624
Query: 586 IISKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+ISKEL++GP +L +S +L+S+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 625 MISKELIAGPDPPIL-PSSSSLKSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 677
>gi|224101131|ref|XP_002312154.1| predicted protein [Populus trichocarpa]
gi|222851974|gb|EEE89521.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/311 (77%), Positives = 268/311 (86%)
Query: 329 LQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEI 388
QGPLRK+ HGGEDE AV AECEGRA+SFLY+L SKDSI+VT+WSGGQ+QIDALADEI
Sbjct: 2 FQGPLRKVHHGGEDEDPAVSVAECEGRAISFLYDLASKDSILVTAWSGGQMQIDALADEI 61
Query: 389 QPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLAT 448
QPVW V PPRLRV+SQD I GLAM+CE ISGELPVVKLDQP D+TVWLGHPPPLLRLA
Sbjct: 62 QPVWMVGSPPRLRVNSQDHIIGLAMLCESISGELPVVKLDQPHDNTVWLGHPPPLLRLAI 121
Query: 449 VDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPS 508
VDLALP+ TESGS I+M +DP+M ERIY VHDGGIDS+VLHFLPFTSQ+ GKDE R+PS
Sbjct: 122 VDLALPRKTESGSYISMFVDPVMPERIYSVHDGGIDSIVLHFLPFTSQSGGKDEMVRTPS 181
Query: 509 VHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDS 568
VHPVL+TCQ E S+PSPLCGF++LSDSFGYSWI +TS QECVV+EM+T NLLLPV +D
Sbjct: 182 VHPVLSTCQVENSTPSPLCGFIALSDSFGYSWIAVITSNQECVVLEMRTLNLLLPVHVDM 241
Query: 569 EKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASPNLRSVAADSIEGRSTLHQYFNLF 628
EKKS + R+ PDIISKELL GPKV+L+PQ SPNLRSVAADSIEGRSTLHQY NLF
Sbjct: 242 EKKSETVEEWTNRNPPDIISKELLIGPKVVLVPQGSPNLRSVAADSIEGRSTLHQYLNLF 301
Query: 629 QENYVEYAHKV 639
ENYVEYAHKV
Sbjct: 302 HENYVEYAHKV 312
>gi|449531713|ref|XP_004172830.1| PREDICTED: uncharacterized LOC101216348 [Cucumis sativus]
Length = 502
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 269/328 (82%), Gaps = 5/328 (1%)
Query: 317 AHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSG 376
A P ALFD+S++LQGPLR+ C+ G++ ++++GAECEGRAVS LYNL+SKDS++VT+WSG
Sbjct: 4 AQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEGRAVSLLYNLISKDSVLVTAWSG 63
Query: 377 GQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVW 436
GQLQIDALADEIQPVW + PPR+RVD D I GLAMICE ++ +L VKLDQPLDHTVW
Sbjct: 64 GQLQIDALADEIQPVWNLGNPPRVRVDPNDNILGLAMICEVVTRKLTKVKLDQPLDHTVW 123
Query: 437 LGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQ 496
G PPPLLRLA VDLALPK E S+ITM D LM +RIY +H+GGIDS++LHFLPFTSQ
Sbjct: 124 SGLPPPLLRLAIVDLALPKKMERDSLITMFADKLMDQRIYALHNGGIDSIILHFLPFTSQ 183
Query: 497 TRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMK 556
+RG+++T R+PSVHPVLNTCQG+TSSP PLCGF SLSDS GYSWI+G+T + EC+V+EMK
Sbjct: 184 SRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSDSLGYSWILGITLSHECIVLEMK 243
Query: 557 TWNLLLPVQI-----DSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASPNLRSVA 611
TWNLL+PVQ+ + + + G + E + P+IISK+LL GPKV+LLPQ+S +RSV
Sbjct: 244 TWNLLVPVQVSNFLYEGKSAAAATGERNESERPEIISKDLLGGPKVVLLPQSSSTMRSVT 303
Query: 612 ADSIEGRSTLHQYFNLFQENYVEYAHKV 639
ADSIEGRS LHQYF LF ENYVEYAH V
Sbjct: 304 ADSIEGRSMLHQYFKLFHENYVEYAHAV 331
>gi|449520683|ref|XP_004167363.1| PREDICTED: uncharacterized LOC101216348 [Cucumis sativus]
Length = 304
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 243/299 (81%), Gaps = 7/299 (2%)
Query: 1 MRFNFDLSEPSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAV------RNGGGKFNGAPKN 54
MR+NFDL++ +D SLTPK +V+W+PL+ HP+F+ + G + +N
Sbjct: 1 MRYNFDLNQADSDPPRSLTPKRDVDWLPLKTHPIFTPTSTSSSSSSGHDYGVSVSPPLRN 60
Query: 55 LVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISIN 114
L+A DGASRLY+WD CLHRIS+RLGEP+PTS+LAA PSKV++ DV+L+F V +ISIN
Sbjct: 61 LLASDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVQKISIN 120
Query: 115 RNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPY 174
+NGSAL L+GS GLC+MYLYG + +SDN T+ICRTV VG QIY +VIRTLQVSWHPY
Sbjct: 121 QNGSALALVGSGGLCIMYLYGHSSTSDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHPY 180
Query: 175 SDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWD 234
S+ HLG+LSSDSVFRLFNL++D++QPEQEYYLQPVEPG+ +NA SICPVDFSFG DHLWD
Sbjct: 181 SNFHLGVLSSDSVFRLFNLSTDLVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLWD 240
Query: 235 RFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAIS 293
+FSVFVLFSDGSIYILCPVVPF SVYK ESILEIYNDAQ+FGL+S N AV NSSLAIS
Sbjct: 241 KFSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSFGLKSPNPTAV-NSSLAIS 298
>gi|168019291|ref|XP_001762178.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686582|gb|EDQ72970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/662 (36%), Positives = 357/662 (53%), Gaps = 59/662 (8%)
Query: 29 LQKHPVFSAPDAVRNGGGKFNGAPK---NLVAWDGASRLYYWDQNAQCLHRISVRLGE-- 83
LQ +P+F G + P+ NL+A DG L+ W+ Q LH + V+ +
Sbjct: 34 LQSNPIFKK--VCLEGEDEKTSRPRLGLNLIASDGRGHLFAWNSKEQLLHHVEVQHSDSL 91
Query: 84 ---PDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVM--------- 131
D S+ A+ K + +++F V I+ NR G +L + G GL V+
Sbjct: 92 KANADNPSLFASKIFKTFKISPEIDFTVRYIAFNRTGRSLTVAGDTGLIVLDLAPHFSAP 151
Query: 132 YLYGRTCSSDNKTIICRTVSVGSQIYFSSS--NVIRTLQVSWHPYSDTHLGILSSDSVFR 189
L GRT CR+ VG F+ N +R LQV WHPYSDTHLG+LS+D V R
Sbjct: 152 SLLGRTR--------CRSSKVGGSRLFNKKTWNALRILQVEWHPYSDTHLGVLSTDGVLR 203
Query: 190 LFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYI 249
LF+L+ DV + EQEY+LQ P R + V F+FGG+HLWDRF+VF+LFS+GSIY+
Sbjct: 204 LFDLSLDVEEAEQEYHLQAELPARPGSHPLARAVGFAFGGEHLWDRFTVFILFSNGSIYV 263
Query: 250 LCPVVPFGSVYKWESILEIYNDAQTFGLRSV--NSLAVRNSSLAISWLEATFPEVAQETI 307
LCPVVPFGS++ +I E+ DA F L S +S VRN+SLA++WLE+ F +A +
Sbjct: 264 LCPVVPFGSMFNGAAIDELVKDAMHFTLPSSTRDSTVVRNASLALAWLESVFTGLAAWSE 323
Query: 308 DEGDPP-----ALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYN 362
G LKAH H D+SV LQGP L + G+ + +A + Y
Sbjct: 324 SIGKEALLSSFMLKAHAHVPLDASVLLQGP------------LPITGSVAK-QAENIAYT 370
Query: 363 LVSKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGEL 422
+V DSI+ S + + + DE+QP+W PPRL VD I + M+ + +
Sbjct: 371 VVGSDSILAVSGRDSCIHLYGVDDEMQPMWNTANPPRLTVDDDGHILSVGMLAQVAQQDR 430
Query: 423 PVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGG 482
+T W G PPPL+ LA V+L+LP S + I++ +DP++ ER+Y H G
Sbjct: 431 LSTSASLRNANTPWTGQPPPLVGLADVELSLPALVLSSAPISLFVDPVVPERLYCHHATG 490
Query: 483 IDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIV 542
+D+++L +LPF+ + K T+ PS+ P+L+TC + PSPL G ++ D G +W+V
Sbjct: 491 MDAIILQWLPFSDDSLNKRFTDPRPSLVPLLDTCPSSSVVPSPLLGAAAILDPLGETWLV 550
Query: 543 GVTSTQECVVIEMKTWNL-LLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLP 601
+TS +C V+++K L P+ ++ K+S D E +S++LL GPK I +P
Sbjct: 551 AITSRGDCAVVDVKPQRLQATPLYLEGTKQSDD--EAPEVGVFQTMSRDLLLGPKDIPIP 608
Query: 602 QASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKVRKLYLNHIKLVLF-TSYSMSIE 660
Q + + + DSIEGR+ LH L E Y++YAH+V H++L F T ++E
Sbjct: 609 QIASSGTPLTVDSIEGRAFLHDQCKLLHEKYIQYAHRV------HVELTSFGTRLHQNVE 662
Query: 661 HQ 662
Q
Sbjct: 663 DQ 664
>gi|297810643|ref|XP_002873205.1| hypothetical protein ARALYDRAFT_908441 [Arabidopsis lyrata subsp.
lyrata]
gi|297319042|gb|EFH49464.1| hypothetical protein ARALYDRAFT_908441 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 209/358 (58%), Gaps = 75/358 (20%)
Query: 20 PKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRISV 79
PKE V WVPLQ HPVF++ + ++ P+NL+AWDG RLYYWD LHR+S+
Sbjct: 2 PKEPVRWVPLQSHPVFASLPSSQDELAASQRFPRNLMAWDGDWRLYYWDSKRYLLHRLSL 61
Query: 80 RLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCS 139
RLGEP+P+S+LAA PSKVM+ D++L F VS+ISIN++GSA+LL GSDG+CVMYL+GR S
Sbjct: 62 RLGEPEPSSVLAAVPSKVMQPDLQLTFSVSKISINKSGSAVLLAGSDGICVMYLFGR-AS 120
Query: 140 SDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQ 199
IICR VS+GS+IY S N I LQ WHP SDTHL ILSSD+VF
Sbjct: 121 VVEYNIICRVVSIGSEIYTSGDNAINLLQALWHPDSDTHLEILSSDAVFSF--------- 171
Query: 200 PEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFGSV 259
E Y+ + ++ ++ V F F+LF+DGSIYILCPVVPFG
Sbjct: 172 ---EDYM-------FMSSPNLSMVQF-------------FILFTDGSIYILCPVVPFGRF 208
Query: 260 YKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAHP 319
+ G R N L V KAHP
Sbjct: 209 TTMQ------------GTRGENILVV------------------------------KAHP 226
Query: 320 HALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSGG 377
+AL D+S++LQGPL K G DE AVR AEC+GRAVS YNLVSKDSI+VT+WS G
Sbjct: 227 YALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLSYNLVSKDSILVTAWSAG 284
>gi|345292791|gb|AEN82887.1| AT5G05680-like protein, partial [Capsella grandiflora]
gi|345292797|gb|AEN82890.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292799|gb|AEN82891.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292801|gb|AEN82892.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292803|gb|AEN82893.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292805|gb|AEN82894.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292807|gb|AEN82895.1| AT5G05680-like protein, partial [Capsella rubella]
gi|345292811|gb|AEN82897.1| AT5G05680-like protein, partial [Capsella rubella]
Length = 180
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
Query: 390 PVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATV 449
PVW RLR++S ++I G+AMICE GELPV + PLDHTVWLGHPPPLLRLA V
Sbjct: 1 PVWIPGNSSRLRMNSHNKILGVAMICESNIGELPVSTSNLPLDHTVWLGHPPPLLRLAMV 60
Query: 450 DLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSV 509
DLALP E GS++T+ D L+ ERIY +H+GGIDS VLH LPFTSQ GKDE ++PSV
Sbjct: 61 DLALPTKLEGGSLVTLFADSLLPERIYSLHNGGIDSTVLHSLPFTSQATGKDEALKTPSV 120
Query: 510 HPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSE 569
H VL+TCQ E S+ SPL GFV LSDSFGY+WI+ V S+ EC+V EMKTW+LLLPV ++++
Sbjct: 121 HTVLSTCQ-EESAVSPLLGFVPLSDSFGYAWIIAVLSSGECIVAEMKTWDLLLPVHVNTD 179
Query: 570 K 570
K
Sbjct: 180 K 180
>gi|345292809|gb|AEN82896.1| AT5G05680-like protein, partial [Capsella rubella]
Length = 180
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 138/181 (76%), Gaps = 1/181 (0%)
Query: 390 PVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATV 449
PVW RLR+ S ++I G+AMICE GELPV + PLDHTVWLGHPPPLLRLA V
Sbjct: 1 PVWIPGNSSRLRMKSHNKILGVAMICESNIGELPVSTSNLPLDHTVWLGHPPPLLRLAMV 60
Query: 450 DLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSV 509
DLALP E GS++T+ D L+ ERIY +H+GGIDS VLH LPFTSQ GKDE ++PSV
Sbjct: 61 DLALPTKLEGGSLVTLFADSLLPERIYSLHNGGIDSTVLHSLPFTSQATGKDEALKTPSV 120
Query: 510 HPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSE 569
H VL+TCQ E S+ SPL GFV LSDSFGY+WI+ V S+ EC+V EMKTW+LLLPV ++++
Sbjct: 121 HTVLSTCQ-EESAVSPLLGFVPLSDSFGYAWIIAVLSSGECIVAEMKTWDLLLPVHVNTD 179
Query: 570 K 570
K
Sbjct: 180 K 180
>gi|345292793|gb|AEN82888.1| AT5G05680-like protein, partial [Capsella grandiflora]
gi|345292795|gb|AEN82889.1| AT5G05680-like protein, partial [Capsella grandiflora]
Length = 180
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 138/181 (76%), Gaps = 1/181 (0%)
Query: 390 PVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATV 449
PVW RLR+ S ++I G+AMICE GELPV + PLDHTVWLGHPPPLLRLA V
Sbjct: 1 PVWIPGNSSRLRMXSHNKILGVAMICESNIGELPVSTSNLPLDHTVWLGHPPPLLRLAMV 60
Query: 450 DLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSV 509
DLALP E GS++T+ D L+ ERIY +H+GGIDS VLH LPFTSQ GKDE ++PSV
Sbjct: 61 DLALPTKLEGGSLVTLFADSLLPERIYSLHNGGIDSTVLHSLPFTSQATGKDEALKTPSV 120
Query: 510 HPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSE 569
H VL+TCQ E S+ SPL GFV LSDSFGY+WI+ V S+ EC+V EMKTW+LLLPV ++++
Sbjct: 121 HTVLSTCQ-EESAVSPLLGFVPLSDSFGYAWIIAVLSSGECIVAEMKTWDLLLPVHVNTD 179
Query: 570 K 570
K
Sbjct: 180 K 180
>gi|345292813|gb|AEN82898.1| AT5G05680-like protein, partial [Neslia paniculata]
Length = 180
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Query: 390 PVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATV 449
PVW RLR++S ++I G+AMICE GELPV + PL+ TVWLGHPPPLLRLA V
Sbjct: 1 PVWISGNSSRLRMNSHNKIQGVAMICESNIGELPVPTSNLPLNQTVWLGHPPPLLRLAMV 60
Query: 450 DLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDETNRSPSV 509
DLALP E GS++T+ D L+ ERIY +HDGGIDS VLH LPFTSQ GKDE ++PSV
Sbjct: 61 DLALPTKDEGGSLVTLFADSLLPERIYSLHDGGIDSTVLHSLPFTSQASGKDEALKTPSV 120
Query: 510 HPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSE 569
H VL+TCQ E S+ SPL GFV LSDSFGY+WI+ V S+ EC+V+E KTW+LLLPV + ++
Sbjct: 121 HTVLSTCQ-EESAVSPLLGFVPLSDSFGYAWIIAVLSSGECIVVETKTWDLLLPVHVSTD 179
Query: 570 K 570
K
Sbjct: 180 K 180
>gi|224101135|ref|XP_002312156.1| predicted protein [Populus trichocarpa]
gi|222851976|gb|EEE89523.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 7/100 (7%)
Query: 1 MRFNFDLSE--PSTDSRLSLTPKEEVEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAW 58
MRFNFDL+E P++ SR SLTPKE+++WVPLQ HP+F++ D +P NL+AW
Sbjct: 1 MRFNFDLTESNPNSSSRKSLTPKEDIQWVPLQNHPLFASSDE-----DTAPRSPSNLLAW 55
Query: 59 DGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVM 98
D ASR YYWD N +CLHRIS+RLG+P+P+S+LAA SKV+
Sbjct: 56 DCASRFYYWDSNLRCLHRISIRLGDPEPSSVLAASLSKVI 95
>gi|226491778|ref|NP_001140259.1| uncharacterized protein LOC100272301 [Zea mays]
gi|194698728|gb|ACF83448.1| unknown [Zea mays]
Length = 317
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 101/156 (64%), Gaps = 13/156 (8%)
Query: 486 VVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVT 545
V LHFLPF+ + ++ PSVHPVL T ETSSP L GFV+++D++G+ + G+T
Sbjct: 2 VTLHFLPFSY----PEMSSTPPSVHPVLTTGNSETSSPF-LSGFVTIADAYGHVQLAGIT 56
Query: 546 STQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTP--DIISKELLSGPKVILLPQA 603
EC V+EMK W P+Q+D E K V K+ + P +ISKEL++GP +LP +
Sbjct: 57 CLGECFVVEMKGWKEPAPLQLDLESKIV-----KDVEPPATGMISKELIAGPDPPILPSS 111
Query: 604 SPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
S +L+S+ DSIEG+STLH Y +F E YVEY HKV
Sbjct: 112 S-SLKSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV 146
>gi|384250554|gb|EIE24033.1| hypothetical protein COCSUDRAFT_62557 [Coccomyxa subellipsoidea
C-169]
Length = 723
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 239/568 (42%), Gaps = 65/568 (11%)
Query: 95 SKVMRADVKLNFEVSRISINRNGSALLLIGSD-------GLCVMYLYGRTCSSDNKTII- 146
S+ +R +L ++S++ +G+ G+ + V+ L R ++ + T
Sbjct: 26 SRALRPQPELGVRAGQLSVSHDGAYAAAAGTSVEDPDQAAVSVLDLTFRRPAARDGTGAE 85
Query: 147 -CRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYY 205
C + V + +F S +R LQ++WHP S THL +L+SD+ ++L++ A ++ PEQ +
Sbjct: 86 RCESAQVDEE-HFRSRPGLRVLQMAWHPGSSTHLAVLTSDNSWQLYH-AGNLSHPEQRFE 143
Query: 206 LQ-------PVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFGS 258
L+ V+ G R A V F+FG H W RF+V+ L SDG+I+ LCPV FG+
Sbjct: 144 LRLQRRRGVGVDGGEGRRA-----VAFAFGPQHSWQRFTVYFLCSDGAIFALCPVACFGA 198
Query: 259 VYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATF--PEVAQETIDEGDPPALK 316
++ Q + + +S +WL+ P V Q ++ G +
Sbjct: 199 GVPASAV-------QALSEATAERDDLAHSGTTKAWLQQALSGPPV-QGSLGVG---GVS 247
Query: 317 AHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSG 376
AL + L GPL C G S + A+ + AVS N + V+ S
Sbjct: 248 VQRLALDEHVPGLCGPLGVACAEGTAASF-LEWAQEDVEAVSLCVNWFGGAATVLAVASA 306
Query: 377 -GQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTV 435
G L + LA++I P W + P L + + E+PVV P +
Sbjct: 307 RGLLGLHLLAEDIFPTWAESAPLCLTD---------DTLLLGVRSEVPVVDEAPPSLLLL 357
Query: 436 WLGHPPPLLRLATVDLALPKNTESGSI-ITMSIDPLMQERIYIVHDGGIDSVVLHFLPFT 494
L L+ P +G + + + D ER+++ V L +LP
Sbjct: 358 DL----VDLQSQAASRGAPDGEHTGRVAMHLLPDEAAPERLFVRTQSAAWIVTLSWLPAL 413
Query: 495 SQTRGKD-ETNRSPSVHPVLNTCQGETSSP-SPLCGFVSLSDSFGYSWIVGVTS--TQEC 550
+ +D E + P Q T+ P S L G + D+ + +V +TS C
Sbjct: 414 ANFLAEDREALEEVAELPPPRVEQLFTAQPGSTLTGACVVGDALSGTALVLLTSDGAHHC 473
Query: 551 VVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTPDIISKELLSGPKVILLPQASPNLRSV 610
+ + +L Q SE++ D A++ + + LL GPK Q + R++
Sbjct: 474 L---RPSGSLPADQQPRSEQR--DAAAREVEEQVQQLYGALLRGPK----GQRQSDGRAL 524
Query: 611 AADSIEGRSTLHQYFNLFQENYVEYAHK 638
A S EG L + E +VE+ H+
Sbjct: 525 AVSSPEGTRALGEGIRSLLERHVEFIHQ 552
>gi|384489652|gb|EIE80874.1| hypothetical protein RO3G_05579 [Rhizopus delemar RA 99-880]
Length = 643
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 157/369 (42%), Gaps = 69/369 (18%)
Query: 143 KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDT--HLGILSSDSVFRLFNLASDVMQP 200
K+I CRT+++G + Y S+ + LQV WHP S+T HL LSSD+ R+F++++D+ +P
Sbjct: 4 KSIDCRTLTIGRKYY--GSDKAQLLQVKWHPLSETRTHLVALSSDNTLRMFDISTDIEEP 61
Query: 201 EQEYYLQPVEPGRYRNAASICPVDFSFGG----DHLWDRFSVFVLFSDGSIYILCPVVPF 256
EQ + L N AS V FS GG W+ F+++ +G IY++CPV+PF
Sbjct: 62 EQSFDL------FQNNNASETAVTFSIGGISHDQSGWESFTIYYALRNGQIYMICPVIPF 115
Query: 257 GSVYK------WESILEI-YNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEV-----AQ 304
S + S++E Y A+ +N+L L WL+ F A
Sbjct: 116 KSAIRKGHLDNLMSLVEAKYQKAKVSDSNDINALTYL-YKLQKQWLQDLFDSAKVGCKAN 174
Query: 305 ETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLV 364
++ D ++ + + F+ V +QGP C RG + LY
Sbjct: 175 PSLMNNDTLSVVGNTSS-FNFPVKIQGPFLTNCPTNS------RGY---AQVTDILYVYS 224
Query: 365 SKDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDR----IHGLAMICEPISG 420
I++ + S G +Q L+ E W V L+ D +R +H L + S
Sbjct: 225 EPLHILILALSNGLIQNHMLSTESDAQWDV-----LKADGVERWQHELHDLLL----KSS 275
Query: 421 ELPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHD 480
LP L + + K + S I + D L ++ Y H
Sbjct: 276 YLPTAILYEEAN-------------------VKTKGSPSVQSIRLVHDSLYKDTYYAYHS 316
Query: 481 GGIDSVVLH 489
GG+ +V ++
Sbjct: 317 GGVTAVNMN 325
>gi|145346822|ref|XP_001417881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578109|gb|ABO96174.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 774
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 217/516 (42%), Gaps = 73/516 (14%)
Query: 143 KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVM--QP 200
+T C + V + + + NV R ++ +WHP +D L +L++D VFRL N + +P
Sbjct: 146 ETRACAAIGVCEEEFEAVPNV-RVVRCAWHPSADATLAMLTTDGVFRLINCDNVAAGGKP 204
Query: 201 EQEYYLQPVEPGRYRNAASICP--VDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFGS 258
E + G + A+ + P VDF+F + W F+V+ L G ++ +CPVVP G+
Sbjct: 205 VVERCWKLDLNGSFPEASPLRPDVVDFAFAPANGWGAFTVYFLAKTGDLHAMCPVVPRGA 264
Query: 259 VYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAH 318
Y ++ + ++ A +WL+ TFPE +D+ P L AH
Sbjct: 265 KYPRVTLKHLAA----------------ENAAAAAWLDETFPE-----LDDTRVPMLAAH 303
Query: 319 PHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVS-FLYNLVSKDSIVVTSWSGG 377
V+LQGPL + + S G + AVS ++L ++ +
Sbjct: 304 VSKDEGRPVALQGPLPRSVSSTQGAS---EGEDALALAVSPAFFDLGVGGTVATLHANAA 360
Query: 378 QLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWL 437
+ I L E++P W + P R + G + S P + +D TV L
Sbjct: 361 HVHI--LPSEVKPSW-CDGPHR-------NVRGYTFVMSDASPSAPDLPKLLTVD-TVRL 409
Query: 438 GHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPF--TS 495
P LA V A +++ DP ++ER+++ +G + S+VL +LP T+
Sbjct: 410 SATPGEQSLAKVKFA-----------SVTWDPALRERVFVCVNGIVHSIVLTWLPVLETA 458
Query: 496 QTRGKDETNRSPSVHP---VLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTS--TQEC 550
DE + P V C + +PL G L D +V + S T
Sbjct: 459 AEDAVDENHADYGALPMPQVAALCDFD----APLVGLQPLGDPLAEGVVVTIRSDGTHRM 514
Query: 551 VV-----IEMKTWNLLLPVQIDSEKKSVDLGAKKE-RDTPDIISKELLSGPKVILLP-QA 603
++ ++ L + + ++++ G++ E R + I K+ + G I+
Sbjct: 515 LIPPPASAMAESGGDLATSAVAVQPQTLEAGSRSELRALSEGIRKDKMKGVDEIMKECGV 574
Query: 604 SPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKV 639
+P +++ S E L + +E YV+YA V
Sbjct: 575 TPEMKTGDPGSNEA---LAKCARALKEIYVDYARDV 607
>gi|384487521|gb|EIE79701.1| hypothetical protein RO3G_04406 [Rhizopus delemar RA 99-880]
Length = 775
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 37/184 (20%)
Query: 103 KLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYF 158
+++F + ++ + NG L + G+ L ++ L +G S K I CRT+ VG + Y+
Sbjct: 57 QIDFSIESLTPSINGRLLSVTGAHSLVIVCLPRQGFG-DISLSKKEIDCRTLDVGRK-YY 114
Query: 159 SSSNVIRTLQVSWHPYSDT--HLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR--- 213
S S + L+V WHP S++ HL +LSSDS+ R+FN+ D+ +PEQ + L PVE
Sbjct: 115 SKSEI---LKVDWHPLSESKGHLVVLSSDSILRIFNVGVDIEEPEQSFDLSPVESKSGLK 171
Query: 214 --------------YRNAASICPVDFSFGG----DHLWDRFSVFVLFSDGSIYILCPVVP 255
Y +A V FS GG W+ F++ +G +Y LCPV+P
Sbjct: 172 SHRGFSFEDDDMNGYEDA-----VTFSLGGVSHEQSGWEPFTIHYALRNGHMYALCPVIP 226
Query: 256 FGSV 259
FGS
Sbjct: 227 FGSA 230
>gi|307111912|gb|EFN60146.1| hypothetical protein CHLNCDRAFT_49671 [Chlorella variabilis]
Length = 845
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 31/256 (12%)
Query: 146 ICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSS-----------------DSVF 188
+C V + +++ F+S +R LQV WHP SD HL +L+S D+ +
Sbjct: 135 LCDAVVLDAEL-FASRPGLRVLQVGWHPDSDAHLAVLTSGEPGACCRCRPPVARGDDNTW 193
Query: 189 RLFNLASDVMQPEQEYYLQ--------PVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
RL+N + EQ + LQ G A V FSFG LW RFS++
Sbjct: 194 RLYNTQHAGLA-EQTFELQLRSRRGLGLGGAGSGAGGAGRAAVAFSFGPPELWQRFSLYF 252
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFP 300
L DGS++ LCPVVPFG Y +I ++ A G + + + A +WL+ F
Sbjct: 253 LTGDGSLWCLCPVVPFGCRYSTSTIEQLEGAADAGGSGAGGEVDFGTAPNAQAWLQRAFQ 312
Query: 301 EVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDE----SLAVRGAECEGRA 356
+A +++ PHAL + +L GPL GE++ SL R A A
Sbjct: 313 LLATPQDPAFGSGMMQSVPHALDEHVPALAGPLPVASAAGEEQREGGSLLTRMAGSGDAA 372
Query: 357 VSFLYNLVSKDSIVVT 372
+ L + S+ V
Sbjct: 373 QALLLSRFSEGCTAVA 388
>gi|290988129|ref|XP_002676774.1| hypothetical protein NAEGRDRAFT_68100 [Naegleria gruberi]
gi|284090378|gb|EFC44030.1| hypothetical protein NAEGRDRAFT_68100 [Naegleria gruberi]
Length = 467
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 191/459 (41%), Gaps = 103/459 (22%)
Query: 45 GGKFNG--APKNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADV 102
GGK P++L + + Y+ + ++ L+ I R + +I A K+++ D+
Sbjct: 30 GGKIGNDVIPRHLTICNQSRECIYFSEQSETLYYIDAR--QSTMKNIKHAKIQKILKTDL 87
Query: 103 KLNFEVSRISINRNGSALLLIGSDGLCVMYL--YGRTCSSDNKTIICRTVSVGSQIYFSS 160
L + +IS N +G+ LL+I + V+ + Y S T I ++S+ + SS
Sbjct: 88 ILR-NIKQISYNSSGNRLLVISDFDINVISIPEYKSGDSESVNTTIEFSLSL---LEHSS 143
Query: 161 SNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI 220
NV +VSWHP S+ H+ L SDS+ R+ ++S ++ P+ + AS
Sbjct: 144 QNV----KVSWHPLSNDHIVALDSDSILRIIQVSSGKIEE------IPLLEKTKDSVAS- 192
Query: 221 CPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSV 280
FSFG LW+RF++++ + +++ LCP++P G V + + +I N +F + SV
Sbjct: 193 ----FSFGSKKLWERFTIYLTTTTQALFALCPIIPSGCVVSEKFLADIVNSTYSFEMESV 248
Query: 281 NSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGG 340
F + D+ + + V+L+ ++ H
Sbjct: 249 KHF---------------FSGIISNVSDDEE------------NREVTLKTSTKE-NHAF 280
Query: 341 EDESLAVRGAECEGRAVSFLYNLVSKD---SIVVTSWSGGQLQIDALADEIQPVWT---- 393
++ + + + ++ + + S +VT + G + + + D I+PVW
Sbjct: 281 KNRIIPIHNKKVSNLDIADMITINQNSNLPSCLVTVNTSGVIHLFVITDNIRPVWKKKSF 340
Query: 394 -VNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPPLLRLATVDLA 452
VN+ P ++ + I E ++G+ K++ L PP L L
Sbjct: 341 DVNVSP--------QVIEASCIQEVLTGD----KMNSSL---------PPYLTL------ 373
Query: 453 LPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFL 491
PL E +Y VH+ G + + F+
Sbjct: 374 ---------------HPLSIETVYCVHERGANEITFPFI 397
>gi|308804579|ref|XP_003079602.1| nuclear pore complex protein-related (ISS) [Ostreococcus tauri]
gi|116058057|emb|CAL54260.1| nuclear pore complex protein-related (ISS) [Ostreococcus tauri]
Length = 964
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 139 SSDNKTIICRTVSVG-SQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDV 197
+SD + + V+VG + F + +R + WHP +D+ L +L++D VFRL N D+
Sbjct: 322 ASDGVSEERQCVAVGVCEEEFEAVPSVRVARCEWHPSADSTLAMLTTDGVFRLINC-DDI 380
Query: 198 MQ---PEQEYYLQPVEPGRYRNAASICP--VDFSFGGDHLWDRFSVFVLFSDGSIYILCP 252
P E + G + A+ + P VDF+F + W F+V+ L G ++ +CP
Sbjct: 381 AGGGVPVVERCWRLDLTGTFPEASPLRPDVVDFAFAPKNAWGAFTVYFLAKSGDVHAMCP 440
Query: 253 VVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDP 312
VVP G+ K+ ++ + +L V+ A WL TFP + +
Sbjct: 441 VVPRGA--KYPRVM-------------LKTLKVKTEKEA-EWLSETFPNLGDAHV----- 479
Query: 313 PALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSF-----LYNLVSKD 367
P L AH V+LQGPL + SL+ +G A+S LYN+
Sbjct: 480 PMLTAHVKREEGRPVALQGPLPRTV------SLSSKGTTEGDDALSLAVSPPLYNVDGGG 533
Query: 368 SIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKL 427
++ S + + + +++P W +R G + P +
Sbjct: 534 TMATLHASA--VHVHVIPCDVRPSWCDGPHKNMR--------GYTYVMSDSFSSAPDLPT 583
Query: 428 DQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVV 487
+D T+ L P LA V A +S DP ++ERI++ +G + S+V
Sbjct: 584 LLTVD-TIRLSAVPGEQSLAKVKFA-----------DVSWDPALRERIFVCVNGNVHSIV 631
Query: 488 LHFLP 492
L +LP
Sbjct: 632 LTWLP 636
>gi|66815831|ref|XP_641932.1| hypothetical protein DDB_G0279039 [Dictyostelium discoideum AX4]
gi|60469959|gb|EAL67941.1| hypothetical protein DDB_G0279039 [Dictyostelium discoideum AX4]
Length = 961
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 45/269 (16%)
Query: 25 EWVPL-QKHPVFSA-------PDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQC-LH 75
E +PL +P+FS P + + + + KN ++ + S Y+ +C L+
Sbjct: 5 EIIPLLSSNPLFSKTPQSSQKPSSFTSENNELSFTAKNFLSVNNQSSEIYYYSPIECKLY 64
Query: 76 RISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYG 135
I V E + + A + +K+NFEV +I +N + L + G ++ L
Sbjct: 65 VIKV---ESTLDNTICAI--RFQELKLKINFEVYKIELNEDSRYLCISGHVNCIIVDLNP 119
Query: 136 RTCSS-----------DNKT-----IICRTVSVGSQIYFSS-SNVIRTLQVSWHPYSDTH 178
+T +S +NKT + R+ ++ Y S SN+I+ QV WHP S+ H
Sbjct: 120 QTVNSYFTSQEIFSDQENKTFGYDSLTVRSFTLDKTFYQSQISNIIK--QVEWHPLSNIH 177
Query: 179 LGILSSDSVFRLFNLASDVMQPEQEYYLQPV---------EPGRYRNAASICP--VDFSF 227
L IL S++ +++N+ S + EQ + L+ + + RN + F F
Sbjct: 178 LVILYSNNTLKIYNIQSGNEEIEQTFNLESIHTFESLKNLKNNDIRNQTKNTKKFISFCF 237
Query: 228 GGD-HLWDRFSVFVLFSDGSIYILCPVVP 255
G + + W RF++F+L G I+ LCPV+P
Sbjct: 238 GSNINFWTRFTIFLLSDSGEIFNLCPVIP 266
>gi|301115176|ref|XP_002905317.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110106|gb|EEY68158.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 871
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 146 ICRTVSVGSQIYF----SSSNVIRTL-------QVSWHPYSDTHLGILSSDSVFRLFNLA 194
+ + V+ G ++ F S+ V+RT+ +WHP SDTHL +LS +FN
Sbjct: 166 VKQRVAPGKRVAFVSREQSAAVVRTVGYFSNVRHAAWHPLSDTHLVVLSDAEEIEVFNTQ 225
Query: 195 SDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGD--------------HLWDRFSVFV 240
DV +PEQ + L R A S C F FG +WD F+ +V
Sbjct: 226 QDVSKPEQRHRLDFPTKARATGAFSTC---FCFGASIQAQQQHAGQTQAAQIWDAFTCYV 282
Query: 241 LFSDGSIYILCPVVPF 256
L SDG++Y LCP+VP+
Sbjct: 283 LRSDGAVYALCPLVPY 298
>gi|303276116|ref|XP_003057352.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461704|gb|EEH58997.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 877
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 125 SDGLCVMYLYGRTC--SSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGIL 182
S L V+ L T D CR VS+ F+S +R L+ SWHP SD+HL +L
Sbjct: 131 SSALSVVTLRAATTLERRDAGDPGCRVVSLLVD-RFASHASVRVLRASWHPRSDSHLVVL 189
Query: 183 SSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICP--VDFSFGGDHLWDRFSVFV 240
SD +F+ A+ + EQ + L P G + P VDF F H W S+ +
Sbjct: 190 LSDGTLHVFDAAAGC-EIEQAFRLDPWGRGPAPGPFPLRPEIVDFDFAPPHGWGALSLIL 248
Query: 241 LFSDGSIYILCPVVPFGSVY 260
L +G +Y LCP P+G+ Y
Sbjct: 249 LGREGDVYTLCPFAPYGARY 268
>gi|330844069|ref|XP_003293960.1| hypothetical protein DICPUDRAFT_158880 [Dictyostelium purpureum]
gi|325075655|gb|EGC29516.1| hypothetical protein DICPUDRAFT_158880 [Dictyostelium purpureum]
Length = 259
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 43/263 (16%)
Query: 25 EWVPL-QKHPVFSA----PDAVRNGGGKFNGAPKNLVAWDG-ASRLYYWDQNAQCLHRIS 78
E +PL +P+FS + + + +PKN ++ + +S +YY+ Q ++ I
Sbjct: 5 ELIPLLTSNPLFSKGPYQKKSTSSSDNELAFSPKNFLSVNNQSSEIYYYCPIEQKIYVIK 64
Query: 79 VRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTC 138
+ E + + + K VK++FEV +I +N + L ++G+ V+ L +T
Sbjct: 65 I---ESTLDNTIGSI--KYQELKVKIDFEVFKIELNEDSRYLSIVGNLNCIVVDLNPQTV 119
Query: 139 SS-----------DNKTIICRTVSVG-SQIYFSSSNVIRTL-QVSWHPYSDTHLGILSSD 185
+S +NKTI ++ V S I SN+ + QV WHP S+ HL IL S+
Sbjct: 120 NSYFTNNEIYQDGENKTIGYESLKVRYSPIDSPFSNISSIIKQVEWHPLSNIHLAILYSN 179
Query: 186 SVFRLFNLASDVMQP-EQEYYLQP--------------VEPGRYRNAASICPVDFSFGGD 230
++ ++FN+ + + EQ + L+ +E + +N S + F F +
Sbjct: 180 NILKIFNIQKEKEETIEQTFNLESLYTYESLKNLKNNNIEMEK-KNTKSF--ISFCFAPN 236
Query: 231 -HLWDRFSVFVLFSDGSIYILCP 252
+ W +F++F+L +DG +Y LCP
Sbjct: 237 INFWSKFTIFLLCNDGEVYNLCP 259
>gi|71534966|gb|AAZ32887.1| nuclear pore complex protein-related protein [Medicago sativa]
Length = 210
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 598 ILLPQASPNLRSVAADSIEGRSTLHQYFNLFQENYVEYAHKVRKLYLNH 646
+L+P AS +LR+VAADSIEGRSTLHQYF LF E YVEYAHKV L L H
Sbjct: 1 VLVPWASQSLRAVAADSIEGRSTLHQYFKLFHETYVEYAHKVH-LELKH 48
>gi|255073781|ref|XP_002500565.1| predicted protein [Micromonas sp. RCC299]
gi|226515828|gb|ACO61823.1| predicted protein [Micromonas sp. RCC299]
Length = 845
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 92 AFPSKVMRADVKLNFEVSRISINRNGSALLLIG--------------SDGLCVMYLYGRT 137
A P++V + + ++FE IS++ +G + G S L ++ L
Sbjct: 64 ALPTRVFKPEPPIDFEPRTISVSPSGHFAAVGGLRHDASAGSGSIPPSSALAIVSLRTGG 123
Query: 138 CSS-----DNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFN 192
S ++ CR V + F +R L+ +WHP SD HL +L SD +F+
Sbjct: 124 DRSGFEALEDGAPGCRCVPLLDD-DFDRHPSMRPLRAAWHPNSDGHLCVLLSDGTLHVFD 182
Query: 193 LASDVMQPEQEYYLQP----VEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIY 248
A + EQ + L P PG Y I VDF+F H W S+ +L +G +Y
Sbjct: 183 AAVGPVA-EQAFRLDPWGRGSRPGPYPLRPEI--VDFAFAPPHGWGALSLVLLGREGDVY 239
Query: 249 ILCPVVPFGSVY 260
++CP P+G+ Y
Sbjct: 240 VMCPFAPWGARY 251
>gi|302828806|ref|XP_002945970.1| hypothetical protein VOLCADRAFT_86496 [Volvox carteri f.
nagariensis]
gi|300268785|gb|EFJ52965.1| hypothetical protein VOLCADRAFT_86496 [Volvox carteri f.
nagariensis]
Length = 919
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 117/285 (41%), Gaps = 57/285 (20%)
Query: 86 PTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSD-------GLCVMYLYGRTC 138
P I + + +R ++F+V + + +G LLL G+ + V+ L+G
Sbjct: 60 PARITSPAATNFVRTHPAIDFDVRGLQVAPSGRYLLLHGTSYQDASVVVMAVVDLHGGQP 119
Query: 139 SSDN---------KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFR 189
+ N + CR + V + F S + Q SWHP+S+ HL +L+SD+ R
Sbjct: 120 APSNPHARSGHAVRVKSCRLLHV-DPVLFGSRPGLVLYQASWHPHSEEHLVLLTSDNRLR 178
Query: 190 LFNLASDVMQPEQEYY---LQPVEPGRY-----------------RNAASICPVDFSFGG 229
L+ + + EQ + P RY + AS V F FG
Sbjct: 179 LYRVTHSLAVAEQTLHAVLASGPTPQRYGLGSTAASPALPLSASGESPASTDIVAFGFGP 238
Query: 230 DHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSS 289
W FS +L +DG +Y L PV PFG + S+L + G + +
Sbjct: 239 AVGWGLFSYLLLAADGLVYSLGPVAPFG--MRCASVL-----LERLG---------QEET 282
Query: 290 LAISWLEATF-PEVAQETIDEGDPPALKAHPHALFDSSVSLQGPL 333
A+ WLEA F PE Q T + L PH + S ++ GPL
Sbjct: 283 AAVEWLEAVFGPEAVQNTSSKNRWQVL---PHVVEGVSPAVVGPL 324
>gi|325180173|emb|CCA14575.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 981
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 119 ALLLIGSDGLCV---MYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIR-------TLQ 168
+L IG LC +Y+ + S K+ + VSV ++ +++ +
Sbjct: 231 SLKTIGFRTLCQRVQIYINTQISSGSRKSY--KVVSVSEDMFGGQKAIVQQIGGVHNVID 288
Query: 169 VSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQ-PVEP-----GRYRNAASICP 222
WHP S +HL ++S LFN+ D PEQ++ L P G N
Sbjct: 289 AIWHPLSSSHLAVISDSDELLLFNVVQDTSVPEQKHTLNFPTAKATHSSGSGANLQRART 348
Query: 223 VDFSFGG-DHLWDRFSVFVLFSDGSIYILCPVVPF-----GSVYKW-----ESILEIYN 270
V FSFG + WD F+ ++L SDG++Y+LCP+VP+ GS+ K ++ LE+Y
Sbjct: 349 VGFSFGQRSNFWDIFACYILRSDGAVYVLCPLVPYESKLHGSIMKTLRAEVDAQLELYK 407
>gi|348685339|gb|EGZ25154.1| hypothetical protein PHYSODRAFT_285048 [Phytophthora sojae]
Length = 907
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 140 SDNKTIICRTVSVGSQIYFSSSN----VIRTL-------QVSWHPYSDTHLGILSSDSVF 188
+D T + R + G ++ F S +RT+ +WHP SDTH+ +LS
Sbjct: 173 ADMVTQVRRRAAQGKRVAFVSREHCVASVRTVGYFSNVRHAAWHPLSDTHVVVLSDAEEI 232
Query: 189 RLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGD--------------HLWD 234
+FN DV +PEQ + L R A S F FG +WD
Sbjct: 233 EVFNTQQDVSKPEQRHRLDFPTKARATGAFS---TSFCFGASIQLQQQQAAQLQAAQIWD 289
Query: 235 RFSVFVLFSDGSIYILCPVVPF 256
F+ +VL SDG++Y LCP+VP+
Sbjct: 290 AFTCYVLRSDGAVYALCPLVPY 311
>gi|390601178|gb|EIN10572.1| hypothetical protein PUNSTDRAFT_100184 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 845
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 201/493 (40%), Gaps = 83/493 (16%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
+ FE+ ++S+N NG L + G+ + V+ L YGR + + C+++ +G+ Y +
Sbjct: 104 IEFEIQQLSLNPNGKLLAVAGARQVAVVVLPRAGYGRLVPT---ALDCKSIQIGT-FYHA 159
Query: 160 SSNVIRTLQVSWHPYSDTH--LGILSSDSVFRLFNLASDVMQPEQEYYLQPVE-PGRY-- 214
+ +V WHP+ + L ++++D R ++++ D +P+Q P + GRY
Sbjct: 160 TRGAPPIAKVDWHPWGEAGSVLMVMTTDGKLREYDISLDPEEPQQVLSFVPEKIGGRYLA 219
Query: 215 RNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGS------VYKWESIL- 266
++ + F+ G G W +V+ L G +Y +CP +P + V+ E +
Sbjct: 220 QDPSEREVASFTLGRGRADWGPLTVYALMKSGDVYAICPYMPKNASVPSSYVHALECFVA 279
Query: 267 ---EIYNDAQTFGLRSVNSLAVRNSSL---AISWLEATFPEVAQETIDEGDPPALKAHPH 320
E N+AQ + R S++ ++ + ++ T ++ HP
Sbjct: 280 AKQEFLNEAQDLAASTAERQRERFSTVYDYQSKYVSSLLKQLPPGTAFPAPSRSVLMHPP 339
Query: 321 ALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLY---------NLVSKDS--- 368
+ + QGP + + G+E G A LY + D+
Sbjct: 340 SSLKNPPLRQGPFLL-----QPAPRTLDGSEG-GDATDILYASFGDLDDDEATTGDTDQI 393
Query: 369 -IVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKL 427
+V+ ++ G++ + ++++ W + Q + L M+ S +L VK
Sbjct: 394 GVVLIAYQDGKVDVCLDVEKVEAKWQ---------NKQSKRPELPMLAVYESIDLGTVK- 443
Query: 428 DQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSV- 486
T+ P + +DL SG+ + DP+ ++ IY+ H G+ S+
Sbjct: 444 ------TLSATEP------SALDLV------SGNHPVLYPDPMHEDTIYVYHAFGVHSLD 485
Query: 487 ---VLHFLPFTSQTRGKD-----ETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGY 538
VL L + G D E +R V PV++T E S +P+ +D +
Sbjct: 486 LGPVLTSLEAAVRDDGSDTGNALECSRGTDVRPVVSTFSVERKSSNPVTAVAIPNDVYMT 545
Query: 539 SWIVGVTSTQECV 551
I +TS V
Sbjct: 546 YSIFVLTSAGRVV 558
>gi|409079836|gb|EKM80197.1| hypothetical protein AGABI1DRAFT_106444 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 853
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSS-DNKTIICRTVSVGSQIYFSSSN 162
+ F + +IS+N NG L + G+ + V+ L + +TI C++V VG Q Y +S N
Sbjct: 106 VQFSIHQISLNPNGKLLAVAGAFQVAVIVLPRPGLTRLVPETIDCKSVQVG-QFYHASKN 164
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR---YRNA 217
++ WHP+ + + L ++++D R ++++ D +P+Q P + +A
Sbjct: 165 SAPIAKIEWHPWGEAASTLLVMTTDGKLREYDISVDTEEPQQVLSFVPERKSKSYLAEDA 224
Query: 218 ASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+ F+ G G W +V+ L G IY +CP +P
Sbjct: 225 SEREVASFALGKGRADWGPLTVYALMKSGDIYAICPYLP 263
>gi|452824939|gb|EME31939.1| hypothetical protein Gasu_10040 [Galdieria sulphuraria]
Length = 800
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 92 AFPSKV-MRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSD--------N 142
+FP V ++ L+FE + I ++ NG+ L+G G+ + + +
Sbjct: 58 SFPRAVEVQWSKSLSFEATAIRLHPNGNLGALVGERGVACFSIDISSLRWKLFHPKVVID 117
Query: 143 KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQ 202
I R+ S G S +++ V WHP S +HL +L+SD+ +N+ SDV + EQ
Sbjct: 118 VVEIGRSQSCGGVFDLRSDLIVK--DVCWHPSSTSHLCLLTSDNTLWFWNVLSDVEEEEQ 175
Query: 203 EYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFG 257
++ + N S C FG W+ F+ +V S G IY LCPV PFG
Sbjct: 176 RLSIKLPDSS---NVVSFC-----FGIGPGWEFFTAYVTSSKGEIYYLCPVYPFG 222
>gi|426198402|gb|EKV48328.1| hypothetical protein AGABI2DRAFT_184684 [Agaricus bisporus var.
bisporus H97]
Length = 853
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSS-DNKTIICRTVSVGSQIYFSSSN 162
+ F + +IS+N NG L + G+ + V+ L + +TI C++V VG Q Y +S N
Sbjct: 106 VQFSIHQISLNPNGKLLAVAGAFQVAVIVLPRPGLTRLVPETIDCKSVQVG-QFYHASKN 164
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR---YRNA 217
++ WHP+ + + L ++++D R ++++ D +P+Q P + +A
Sbjct: 165 SAPIAKIEWHPWGEAASTLLVMTTDGKLREYDISVDTEEPQQVLSFVPERKSKSYLAEDA 224
Query: 218 ASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+ F+ G G W +V+ L G IY +CP +P
Sbjct: 225 SEREVASFALGKGRADWGPLTVYALMKSGDIYAICPYLP 263
>gi|328769592|gb|EGF79635.1| hypothetical protein BATDEDRAFT_89031 [Batrachochytrium
dendrobatidis JAM81]
Length = 903
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 39/189 (20%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNV 163
L+F V++I +N G L L G + + L T S +++ C+T + S I +S +V
Sbjct: 157 LDFRVTQIQLNPTGRILALCGKRSVLIAVL-PITLKSSVQSLECKTHKI-SNIISTSDHV 214
Query: 164 IRTLQVSWHPYSDT--HLGILSSDSVFRLFNLASDVMQPEQEYYL----QPVEP------ 211
+ WHP SDT HL +L+SD+V R++N+AS PE + Q +
Sbjct: 215 HFISKCHWHPLSDTGAHLAVLTSDAVLRIYNVASSSKTPESSIVVNGDDQEINAIQSSQA 274
Query: 212 --GRYRNAASIC---PVDFSFGGDH--------------------LWDRFSVFVLFSDGS 246
R+R + + V F FG D W F+V+VL G
Sbjct: 275 WTNRHRFGSKMDDGEAVSFCFGVDQSMLDHEYDENDKMTRSKSAASWSPFTVYVLMRSGD 334
Query: 247 IYILCPVVP 255
I+ +CPV P
Sbjct: 335 IFSVCPVAP 343
>gi|389747350|gb|EIM88529.1| hypothetical protein STEHIDRAFT_77614 [Stereum hirsutum FP-91666
SS1]
Length = 803
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 200/499 (40%), Gaps = 64/499 (12%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTII-CRTVSVGSQIYFSSSN 162
L F+V ++++N +G L + G+ + V+ L + ++ C+++ VG Q + ++++
Sbjct: 42 LQFDVHQLALNPSGKLLAVAGAFQIAVVVLPRPGFTKLVPQVVDCKSIQVG-QYHHATTD 100
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEY-YLQPVEPGR---YR- 215
+V WHP+ + + L ++++D R +++++D +P+Q ++QP P + YR
Sbjct: 101 AAPIAKVEWHPWGEAGSTLMVMTTDGKLREYDISTDTEEPQQVVSFVQPRPPKKSKSYRV 160
Query: 216 -NAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESI--LEIYND 271
+ + F+FG G W +V+ + G IY CP +P + I LE +
Sbjct: 161 VDESEYEVASFTFGKGLADWGPLTVYAVLKSGDIYACCPYMPQNASIPSSYIHALECFVS 220
Query: 272 A-QTFGLRSVNSLA-----VRNSSLAISWLEATFPEVAQETIDEGDPPALKAHPHALFDS 325
A Q F + A R +++A ++ T+ + HP A +
Sbjct: 221 AKQEFLAHMIPPPADMETYTRAYDYQYKYIKALLKQLPPGTVYPAASRPVLLHPPATIRT 280
Query: 326 SVSLQGPL------RKI--CHGGEDESLAVR--GAECEGRAVSFLYNLVSKDSIVVTSWS 375
+QGP R + GG + GAE E + +V+ ++
Sbjct: 281 PTRIQGPFLLQPSPRDVDGTEGGYATDILYMKFGAEAEVGEEWQDEGETERLGLVLVTYQ 340
Query: 376 GGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTV 435
G++ + ++++ W + DR L M+ S +L +V +
Sbjct: 341 DGRVDVCLDVEKVEARWETT-----QTTPTDRNAELPMLAVYESVDLGLVSMLSSCQ--- 392
Query: 436 WLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSV--------- 486
PPLL L +G+ + DP+ + +Y+ H G+ ++
Sbjct: 393 -----PPLLDLL-----------AGNQPVLHADPIHDDTVYVYHAFGVHALYLDKLLRSL 436
Query: 487 --VLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGV 544
LH P E + V PV++T E S +P+ +D + I +
Sbjct: 437 AAALHGDPTDKALLSSLEESEQTDVRPVVSTFSVERRSSNPVIAVSIPNDVYLTYSIFIL 496
Query: 545 TSTQECVVIEMKTWNLLLP 563
TS+ V + + LP
Sbjct: 497 TSSMRVVSFVLNLRSDALP 515
>gi|198419446|ref|XP_002131376.1| PREDICTED: similar to nucleoporin 88 [Ciona intestinalis]
Length = 726
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRIS 112
K LV DG S L+ W + C+ ++R I+ F + + L FEV++IS
Sbjct: 36 KQLVYIDG-SNLFVWKEARSCILTTNLRSSLDGKDGIIQVFYCQ----NAPL-FEVNKIS 89
Query: 113 INRNGSALLLIGSDGLCVMYL---YGRTC--SSDNKTIICRTVSVGSQIYFSSSNVIRTL 167
N + + L+GS G V+ L +G+ +I CR+ +V + +F S+ ++ L
Sbjct: 90 FNHTNTHVALVGSRGATVLTLPRRWGKEALYEGGKPSITCRSFAVAER-FFMSNISVQLL 148
Query: 168 QVSWHPYSDT---HLGILSSDSVFRLFNLASDVMQPEQEYYL 206
Q SW+P + + HL IL+SD++ R++N +D P Q + L
Sbjct: 149 QASWYPSTSSQHPHLCILTSDNILRIYNATTDPQTPVQTHKL 190
>gi|402226532|gb|EJU06592.1| hypothetical protein DACRYDRAFT_61384 [Dacryopinax sp. DJM-731 SS1]
Length = 743
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 134/332 (40%), Gaps = 59/332 (17%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
++FE+ I+++ L++ G+ + V+ L Y + S + K CR ++G + S
Sbjct: 41 IHFEILEIALSPTEKMLVIGGAHHVAVVVLPKPGYSKIISPELK---CRCFAIGP-FFHS 96
Query: 160 SSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNA 217
S R +V WHP+ + L +L+ D R +N+ D +P+Q L P R
Sbjct: 97 SPKASRLARVDWHPFGEGGASLMVLTEDGTLREYNVFEDAEEPKQTVNLFPPSLRNSRGY 156
Query: 218 ASICP---VDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQ 273
+ P V F+FG G W + F L + G ++ +CP +P +V + ++ +
Sbjct: 157 SMETPRRAVAFAFGWGRDDWSSLTAFCLTNKGEVFSMCPFMPKRAVLPVSVVQQLLKSTE 216
Query: 274 TFGLRSVNSLAVRNSSLAISWLEATFPEV--------AQETIDEGDPPALKAHPHAL--- 322
L+SV V ++S LEA + + Q D + A P L
Sbjct: 217 -MSLKSV----VDDTSNPQPALEARYQQQLKYVKTLERQLKQDNKNGKRKAASPQKLQLS 271
Query: 323 ----------------FDSSVSLQGPLRKICHGGE-DESLAVRGAECEGRAVSFLYNLVS 365
S V QGP R I E D+S+ E A +Y +
Sbjct: 272 ASGPKAGEAGFTLPTTVKSMVVAQGPYRIIPESPELDDSI-------ESEATDLIYLVYD 324
Query: 366 KDS-----IVVTSWSGGQLQIDALADEIQPVW 392
D+ I+ +W G++ I D ++ +W
Sbjct: 325 DDTSDPLNILGIAWDNGRVDICLDLDRVEGMW 356
>gi|412989116|emb|CCO15707.1| nuclear pore complex protein-related (ISS) [Bathycoccus prasinos]
Length = 459
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 137/359 (38%), Gaps = 72/359 (20%)
Query: 157 YFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRN 216
YF S+ L + P ++ + +L+SD FR+ N PEQ + + P + +
Sbjct: 146 YFESAPSATVLSAKFCPGTEESIAMLTSDGYFRIVNFTRSCSAPEQIWKMDP--SNEHSS 203
Query: 217 AASICP--VDFSFGGDHLWDRFSVFVLFSD-----GSIYILCPVVPFGSVYKWESILEIY 269
+ I P VDF+FG W RF+VF L + ++ +CP+V GS + E+
Sbjct: 204 STPIRPQVVDFTFGPPSGWGRFTVFFLCATEEKKVAAVKCMCPIVASGSRTSSRVLDELA 263
Query: 270 NDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAHPHALFDSSVSL 329
D+Q + ++ WLE TF ++ ++ A K +A +V+L
Sbjct: 264 KDSQM----------QKGGGESLRWLERTFDMTSKASVR----VARKLSANASGGEAVAL 309
Query: 330 QGPLRKICHGGE-------DESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSGGQLQID 382
Q L + +AVR +GR D ++ + +L +
Sbjct: 310 QDFLTTSSASSMHSHASRGNLKIAVRSLSGDGRG---------DDGFLIATLQTDRLIVS 360
Query: 383 ALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHPPP 442
A+ + P+WT I G+ + SG+ H P
Sbjct: 361 AITTALMPLWTSR--------ESRTIEGI-LHASSTSGDR----------------HASP 395
Query: 443 LLRLATVD-LALPKNTESGSIITM-------SIDPLMQERIYIVHDGGIDSVVLHFLPF 493
L VD + L + + G T+ D +++R++ G + SV L +LP
Sbjct: 396 TPILCDVDVIKLENSAQDGGSTTIYDSCQKVEWDTFIKQRLFATLKGSVHSVDLRWLPI 454
>gi|170091092|ref|XP_001876768.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648261|gb|EDR12504.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 850
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 189/499 (37%), Gaps = 86/499 (17%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
+ FE+ +IS+N +G L + G+ + V+ L + R + C++V VG Q Y +
Sbjct: 104 IQFEIHQISLNPSGKLLAVAGAFQVAVVVLPRAGFIRLVPD---VVDCKSVQVG-QFYHA 159
Query: 160 SSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR---Y 214
S N ++ WHP+ D + L +++SD R ++++ D +P+Q P + +
Sbjct: 160 SKNPASVAKIDWHPWGDAGSTLLVMTSDGKLREYDISLDTEEPQQVLSFVPEKKTKSFVA 219
Query: 215 RNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESI--LEIYND 271
+ + V F G G W +++ L G IY +CP +P S I LE +
Sbjct: 220 DDGSEREVVSFVLGKGRADWGPLTMYSLMKSGDIYAICPYMPKNSSIPSSYIHSLECFIA 279
Query: 272 AQTFGLRSVNSLAVRNSSLAISW----LEATFPEVAQETIDEGDPPALKAHPHALFDSSV 327
A+ L S R+ S + + A ++ T+ HP S+
Sbjct: 280 AKQEFLAQGTSTTGRDISTLYDYQRKFITALTRQLPAGTVFPAASRTFLVHPPTTIKSTP 339
Query: 328 SLQGPLR-----KICHG--------------GEDESLAVRGAECEGRAVSFLYNLVSKDS 368
+ QGP + G G DE G E E V
Sbjct: 340 TRQGPFLLQPSPRTLEGSDGGDATDISYLAFGTDEQPEEDGGETEHLGV----------- 388
Query: 369 IVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLD 428
++ S+ G++ + ++++ W V S R + + E I + L
Sbjct: 389 -LLVSYQDGKVDVFLDVEKVEARWDVK-------QSSSRDLPMLAVYETID-----LGLV 435
Query: 429 QPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVL 488
L+ + PP L L T G+ T DP+ + +Y+ H G+ ++ +
Sbjct: 436 STLNSISPAPNQPPSLDLLT-----------GNHPTFLTDPIHDDVVYVYHAFGVHALDI 484
Query: 489 HFL--PFTSQTRGKDETNRSPS----------VHPVLNTCQGETSSPSPLCGFVSLSDSF 536
L ++ R DE+ +S + V P+L T E +P+ +D +
Sbjct: 485 GPLLQGLSAALRADDESEKSLTSALQRSLGTVVKPILTTFSVERRCSNPVVAVAIPNDVY 544
Query: 537 GYSWIVGVTSTQECVVIEM 555
+ +TS V +
Sbjct: 545 LTYSVFILTSVMRITVFPL 563
>gi|336386295|gb|EGO27441.1| hypothetical protein SERLADRAFT_446672 [Serpula lacrymans var.
lacrymans S7.9]
Length = 821
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 91 AAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTII 146
A SK+++ + FE+ ++++N +G L + G+ + V+ L Y + + +I
Sbjct: 63 AGRSSKILKTP-SIEFEIHQLALNPSGKLLAVAGASQVAVVVLPRAGYAKLVPT---SIE 118
Query: 147 CRTVSVGSQIYFSSSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEY 204
C+++SVG Q Y +SS+ +++ WHP+ + + L +++ D R ++++ D +P+Q
Sbjct: 119 CKSISVG-QFYHASSSSAPVVKIEWHPWGEAGSTLMVMTVDGKLREYDISVDTDEPQQIL 177
Query: 205 YLQP--------VEPGRYRNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
P E R AS F+ G G W +V+ + G IY +CP +P
Sbjct: 178 SFVPDKKTKSYLAEDPSEREVAS-----FTLGKGIADWGPLTVYAVMKSGDIYSICPYMP 232
>gi|336373471|gb|EGO01809.1| hypothetical protein SERLA73DRAFT_70970 [Serpula lacrymans var.
lacrymans S7.3]
Length = 854
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 91 AAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTII 146
A SK+++ + FE+ ++++N +G L + G+ + V+ L Y + + +I
Sbjct: 96 AGRSSKILKTP-SIEFEIHQLALNPSGKLLAVAGASQVAVVVLPRAGYAKLVPT---SIE 151
Query: 147 CRTVSVGSQIYFSSSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEY 204
C+++SVG Q Y +SS+ +++ WHP+ + + L +++ D R ++++ D +P+Q
Sbjct: 152 CKSISVG-QFYHASSSSAPVVKIEWHPWGEAGSTLMVMTVDGKLREYDISVDTDEPQQIL 210
Query: 205 YLQP--------VEPGRYRNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
P E R AS F+ G G W +V+ + G IY +CP +P
Sbjct: 211 SFVPDKKTKSYLAEDPSEREVAS-----FTLGKGIADWGPLTVYAVMKSGDIYSICPYMP 265
>gi|299747956|ref|XP_001837363.2| hypothetical protein CC1G_01275 [Coprinopsis cinerea okayama7#130]
gi|298407751|gb|EAU84279.2| hypothetical protein CC1G_01275 [Coprinopsis cinerea okayama7#130]
Length = 888
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 96 KVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVS 151
KVM +NFE+ +IS+N +G L + G+ + V+ + Y R +I C+ V
Sbjct: 131 KVMHTP-NVNFEIHQISLNPSGKLLAIAGAFQVAVVVMPRPGYNRLVPD---SIDCKAVQ 186
Query: 152 VGSQIYFSSSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPV 209
VG + Y + + + ++ WHP+ + + L ++++D R ++++ D +P+Q P
Sbjct: 187 VG-KYYHARDSSVPVAKIDWHPWGEAGSTLLVMTTDGRLREYDISYDAEEPQQTLSFIP- 244
Query: 210 EPGRYRNAASICPVD--------FSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
R + D F+ G G W +++ L G +Y +CP +P
Sbjct: 245 ----QRKTKAFAAEDEGEREVTSFTLGKGKADWGPLTIYALTKSGDVYAICPYLP 295
>gi|403418150|emb|CCM04850.1| predicted protein [Fibroporia radiculosa]
Length = 856
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
+ FE+ +++++ +G L + G+ + V+ L + + S TI C+T+ VG Q Y +
Sbjct: 104 IQFEIHQLALSPHGKLLAVAGASQVAVVVLPRAGFTKLVPS---TIDCKTIQVG-QFYHA 159
Query: 160 SSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR---Y 214
++ WHP+ + T L ++++D R ++++ D +P+Q + P +
Sbjct: 160 VDTSAPVAKIEWHPWGEGGTTLMVMTTDGKLREYDMSVDSEEPQQTLFFVPDKKKNSFIA 219
Query: 215 RNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+ + V F+ G G W S++ + G IY +CP +P
Sbjct: 220 EDESEREVVSFTLGKGRADWGPLSIYAITRSGDIYAICPYMP 261
>gi|392568057|gb|EIW61231.1| hypothetical protein TRAVEDRAFT_56601 [Trametes versicolor
FP-101664 SS1]
Length = 883
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSD--NKTIICRTVSVGSQIYFSSS 161
L FE+ ++++N +G L + G+ + V+ L RT + T+ C+++ +G Q Y ++
Sbjct: 105 LQFEIHQVALNPSGKLLAVAGAFQVAVIVL-PRTGFNKLVTATVDCKSIQIG-QYYHAAD 162
Query: 162 NVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR----YR 215
N ++ WHP+ + L +++ D R +++++D +P+Q P E R
Sbjct: 163 NSAPVAKIDWHPWGQGGSTLLVMTVDGKLREYDISADADEPQQTLSFVP-EKKRNTFDAE 221
Query: 216 NAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+AA F+FG G W +V+ G +Y + P +P
Sbjct: 222 DAAEREVASFTFGKGKADWGPLTVYAAMRSGDVYAISPYMP 262
>gi|328874176|gb|EGG22542.1| hypothetical protein DFA_04672 [Dictyostelium fasciculatum]
Length = 770
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 48 FNGAPKNLVAWDGA-SRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNF 106
F KNL++ +YY++ + L+ I + E D + K +++
Sbjct: 42 FQFKSKNLLSISNQYHEIYYFNPYIKQLYVIRI---ENDFNQ--GVYSIKYQEIKTNIDY 96
Query: 107 EVSRISINRNGSALLLIGSDGLCVM-------YLYGRTCSS---DNKTIICRTVSVGSQI 156
+V +I +N N L++ G+ ++ LY S D KT + + ++
Sbjct: 97 DVYKIQLNENARYLMVCGTFKWTIIDLNPTFRSLYFEQLQSQQPDIKTFEYQPIQAVLRV 156
Query: 157 YFSSSNVIRTL-----QVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVE- 210
SS I L + WHP S+ H+ IL S++ +++N+ + + + EQ + L +E
Sbjct: 157 D-SSLQPITELDTIINHIDWHPLSNIHIIILFSNNYLKIYNITTKIYEEEQSFNLGHLEI 215
Query: 211 ---PGRYRNAASICPV--DFSFG---GDHLWDRFSVFVLFSDGSIYILCPVVP 255
G+ + P+ F FG D W RFS++++ D ++Y+LCP++P
Sbjct: 216 HNSIGKEYSMEQANPIFKSFCFGPLIND--WTRFSIYLVADDCNVYLLCPIIP 266
>gi|449549679|gb|EMD40644.1| hypothetical protein CERSUDRAFT_148888 [Ceriporiopsis subvermispora
B]
Length = 855
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTII-CRTVSVGSQIYFSSSN 162
+ F++ +++N NG L + G+ + V+ L + TI+ C+++ +G Q Y ++++
Sbjct: 105 VTFDIHHMALNPNGKLLAVAGAFQVAVVVLPRAGFTRLVPTIVDCKSLQIG-QYYHAANS 163
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRN---- 216
QV WHP+ + + L +++ D R ++++ D +P+Q + P R RN
Sbjct: 164 SAPIAQVEWHPWGEGGSTLLVMTIDGKLREYDISMDADEPQQ---VLSFVPERKRNTFDA 220
Query: 217 --AASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
A+ FS G G W +++ L G IY +CP +P
Sbjct: 221 TDASEREVASFSLGKGRADWGPLTIYALMRSGDIYSICPYIP 262
>gi|189238498|ref|XP_001809287.1| PREDICTED: similar to nucleoporin, p88, putative [Tribolium
castaneum]
Length = 676
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 64 LYYWDQNAQCLHRISV---RLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSAL 120
L+ WD C+ +++ R + D + FP + + F+ + +N G+ L
Sbjct: 40 LFTWDFANNCVLTLNIKAARSNDGDNVTHQNLFPV------LPVMFQPELLLVNDTGTLL 93
Query: 121 LLIGSDGLCVM------YLYGRTCSSDNKTII-CRTVSVGSQIYFSSSNVIRTLQVSWHP 173
L+ G G+ VM LYG +D++ ++ CRT ++ ++ S +V++ QV +HP
Sbjct: 94 LVAGPSGIIVMELPAMHLLYG----ADSRDVVFCRTHTLDERLLICS-DVVQVRQVRFHP 148
Query: 174 YS--DTHLGILSSDSVFRLFNL-------ASDVMQPEQEYYLQPVEPGRYRNAASICPVD 224
S +TH+ L+SD+ RL+N+ S V E + P + A VD
Sbjct: 149 GSPRNTHIVALTSDNTLRLYNIENRSAVSVSKVTIGETPIGVFPGTKTSFLAAFGEVGVD 208
Query: 225 FSFGGDHLWD----------RFSVFVLFSDGSIYILCPVVPFGSVYKW 262
F FG + ++ VFVL DGS+Y + VP KW
Sbjct: 209 FDFGQPEITKSPTNDETQELQWPVFVLRGDGSVYSV--TVPLEPKAKW 254
>gi|430812624|emb|CCJ29972.1| unnamed protein product [Pneumocystis jirovecii]
Length = 743
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 161/419 (38%), Gaps = 68/419 (16%)
Query: 22 EEVEWV-PLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRISVR 80
+E W+ Q HP+FS + + G K L+A D+ + +
Sbjct: 10 DENSWIHSFQNHPIFSLSEREQEGIRNIKN-KKLLIAIRQTEVFVAVDKTIRYTDLKECK 68
Query: 81 LGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL--YGRTC 138
L E + K+ K+NF + R+ IN GS L++IG+ L V++L Y +
Sbjct: 69 LDEFQKNYKMNYKEFKLS----KINFCIERLIINTCGSILVVIGAYDLAVIFLPTYLNSL 124
Query: 139 SSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTH--LGILSSDSVFR------- 189
+N R VG + Y+ + ++ L +HP S + +LSSD+V R
Sbjct: 125 EGNN----LRINEVGRK-YYGETEIVSVL---FHPASKNSNTILVLSSDAVIRYYIYLFK 176
Query: 190 ------LFNLASDVMQPEQEYYLQPVEPGRYRNAASICP-------VDFSFGGD-HLWDR 235
+F L+ + EQ L GR R S DF F + W
Sbjct: 177 YFLIIRVFELSLSFEESEQAIDLIS-RTGRTRKKGSFVVNEDIFQVSDFCFDSKANEWSL 235
Query: 236 FSVFVLFSDGSIYILCPVVPFGSVYKWESI--LEIYNDAQTFGLRSVN------SLAVRN 287
F++ VL +G IY +CP++P + + + L Y +T L + S N
Sbjct: 236 FTLHVLLQNGDIYSICPLIPSNCMVQRAYLDRLACYISTKTQQLNKIKNDPTLISHEEEN 295
Query: 288 SSLAISWLEATFPEVAQETIDE---GDP--PALKAHPHALFDS------SVSLQGPLRKI 336
L W+ +++ I++ G P +L AH F V +QGP
Sbjct: 296 MRLQTRWISDILGQIS--LINDYGLGSPLSQSLDAHDLVTFSRPNISRFPVLVQGPFLFQ 353
Query: 337 CHGGEDESLAVRGAECEGRAVSFLYNLVSKDSIVVTSWSGGQLQIDALADEIQPVWTVN 395
E S V + + + I+ S++ G++ I D I+P W +N
Sbjct: 354 PAPLEFSSKHVMASNIIALGTNTI-------GILAISYTDGKIDICIEVDRIEPKWFLN 405
>gi|443689267|gb|ELT91714.1| hypothetical protein CAPTEDRAFT_219050 [Capitella teleta]
Length = 642
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 32/244 (13%)
Query: 76 RISVRLGEPDPTSILAAFPSKVMRADVKL--NFEVSRISINRNGSALLLIGSDGLCVMYL 133
+++ R EP L PS+ + +F V+ + +N + S + +IG +G V L
Sbjct: 12 QVAPRGIEPTTLCTLGTTPSQPPKLTCSRPPSFTVNEVLLNSSESHVAIIGKNGASVFEL 71
Query: 134 ---YGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS--DTHLGILSSDSVF 188
G + +IC+TVS+ + + SS + L SWHP S D+HL +L+SD+V
Sbjct: 72 PIQRGSHFEDGRELVICKTVSIAERFFVSSGE--KLLHASWHPASETDSHLVLLTSDNVV 129
Query: 189 RLFNLASDVMQPEQEYYLQPVEPGRYR--------NAASICPVDFSFGGD-HLWDRFS-- 237
R++++ D Q Y + P + +A V F FG L +F
Sbjct: 130 RVYDIC-DPQVAVQSYSISNGSPSSFASPPRLSMLSALGDTAVAFDFGSPLPLLTKFKSK 188
Query: 238 --------VFVLFSDGSIYILCPVVPFGSVYKWESI--LEIYNDAQ-TFGLRSVNSLAVR 286
+++L +G IY+L + + + E I L +Y + +G + + L ++
Sbjct: 189 KEALSIWPLYILLGNGEIYVLYTSLQSNTAFHKEVIGPLAMYPPVEDNYGTDACSILFLK 248
Query: 287 NSSL 290
S L
Sbjct: 249 GSQL 252
>gi|159474368|ref|XP_001695297.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275780|gb|EDP01555.1| predicted protein [Chlamydomonas reinhardtii]
Length = 662
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 37/147 (25%)
Query: 147 CRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYL 206
CR ++V S ++ S ++ QVSWH +S+ HL +L+SD+ RL+++ + EQ ++
Sbjct: 19 CRLLAVDSVLFGSRPGLV-LCQVSWHAHSEEHLVVLTSDNRLRLYHVTHSLAVAEQTLHV 77
Query: 207 QPVE---PGRY---------RNAASICP------------------------VDFSFGGD 230
P P RY + AS P V F+FG
Sbjct: 78 VPQAGPLPQRYGLSTAAAAAGHGASPGPGVAGTPASPLGGSAAGGALGSSDVVAFAFGPA 137
Query: 231 HLWDRFSVFVLFSDGSIYILCPVVPFG 257
W FS+ +L +DG +Y L PV PFG
Sbjct: 138 LGWGLFSILLLGNDGLVYSLGPVAPFG 164
>gi|281207418|gb|EFA81601.1| hypothetical protein PPL_05592 [Polysphondylium pallidum PN500]
Length = 969
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 46/241 (19%)
Query: 52 PKNLVAWDGA-SRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSR 110
PKNL++ D +YY + L I + + +I + K + ++F+V R
Sbjct: 360 PKNLISIDNQFQEIYYLSPKTRKLFVIRIEYSLEN--NIDTVYTIKYQELIINIDFDVFR 417
Query: 111 ISINRNGSALLLIGSDGLCVMYL----------------YGRTCSSDNKTIICRTVSVGS 154
I +N N L LIG+ C++ L Y + + +I C T+ + +
Sbjct: 418 IVLNDNSRYLCLIGNFKWCLVDLNPSMRSSFFQSKPTNIYSDINTEEYTSIKCNTIFLDN 477
Query: 155 QIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLFNLASDV-------------MQPE 201
+ I LQ+ WHP S+THL +L S++ +LFN + ++ E
Sbjct: 478 SLLKFKDLSINILQIDWHPLSNTHLLVLYSNNQLKLFNTNHIIDNNNDSSSSNSNNVEYE 537
Query: 202 QEYYLQPV---------EPG--RYRNAASICPVD-FSFGG-DHLWDRFSVFVLFS-DGSI 247
Q + L + +P N+ I V F FG + W RFSV++L S D SI
Sbjct: 538 QVFNLAKLYIHTGDSLHKPAGTSTTNSVKIGNVKSFCFGSLINYWSRFSVYLLDSRDYSI 597
Query: 248 Y 248
Y
Sbjct: 598 Y 598
>gi|443896220|dbj|GAC73564.1| hypothetical protein PANT_9d00161 [Pseudozyma antarctica T-34]
Length = 1095
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 104 LNFEVSRISINRNGSALLLIGSD--GLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSS 161
++FE+ +S+N G L +G+ L VM G T D +T+ CR V + + Y S+
Sbjct: 120 IDFEIQHLSLNPTGKLLACVGASQITLLVMPRSGYTKHVD-RTVACRAVPI-APYYHSAH 177
Query: 162 NVIRTLQVSWHPY--SDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEP 211
+ +V WHP+ S T L +L+ D + R +++A D +P+Q P++P
Sbjct: 178 SDAAVAKVDWHPWGESGTSLLVLTDDGLLREYDVAKDTEEPQQTASFLPIQP 229
>gi|71003628|ref|XP_756480.1| hypothetical protein UM00333.1 [Ustilago maydis 521]
gi|46096085|gb|EAK81318.1| hypothetical protein UM00333.1 [Ustilago maydis 521]
Length = 1102
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 102 VKLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIY 157
+K+ F++ +SIN G L +G + +M L Y + ++ I+CRTV + + Y
Sbjct: 120 IKIGFDIRSLSINPTGKLLACVGDSQITLMVLPRSGYMKHV---DREIVCRTVPI-APYY 175
Query: 158 FSSSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVE 210
S+ + +V WHP+ + T L +L+ D + R +++A D +P+Q PV+
Sbjct: 176 HSAHSETAVAKVDWHPWGENGTSLLVLTEDGLLREYDVAKDTAEPQQTASFVPVQ 230
>gi|395324149|gb|EJF56595.1| hypothetical protein DICSQDRAFT_157828 [Dichomitus squalens
LYAD-421 SS1]
Length = 906
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
+ FE+ +I++N NG L + G+ + V+ L Y + ++ T+ C++ VG Q + +
Sbjct: 105 VQFEIHQIALNSNGRLLAIAGAFQVAVIVLPRTGYNKLVTA---TVECKSFQVG-QYHHA 160
Query: 160 SSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEP------ 211
++ WHP+ + L +L++D R ++++ D +P+Q P +
Sbjct: 161 IETSAPVAKIDWHPWGQGGSTLLVLTTDGKLREYDISEDADEPQQTLSFVPEKKRGSSFL 220
Query: 212 ---GRYRNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
G R A V F+ G G W +V+ + G IY + P +P
Sbjct: 221 AGDGGEREA-----VSFALGKGRADWGPLTVYAVMRSGDIYAISPYLP 263
>gi|323507864|emb|CBQ67735.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1073
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 65/216 (30%)
Query: 103 KLNFEVSRISINRNGSALLLIGSDGLCVMYL--YGRTCSSDNKTIICRTVSVGSQIYFSS 160
K+ F++ +SIN G L +G + ++ L G T D + I+CRTV V + Y S+
Sbjct: 114 KIEFDIRHLSINPTGKLLACVGDSQVTLIVLPRSGYTKHVD-REIVCRTVPV-APYYHSA 171
Query: 161 SNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVE-------- 210
+ +V WHP+ + T L +L+ D + R +++A D +P+Q P++
Sbjct: 172 HSDSAVAKVDWHPWGENGTSLLVLTEDGLLREYDVAKDTEEPQQTASFLPLQSTSTTQRS 231
Query: 211 ------PGRY-RNA-ASICPVDFSFGGD-------------------------------- 230
P Y RNA +S+ P F D
Sbjct: 232 RSRSATPSLYSRNADSSLAPRSFGVSADDDDATTAVSFSLCVTNTPQPRSTPFDRDADQT 291
Query: 231 -----------HLWDRFSVFVLFSDGSIYILCPVVP 255
W +VF L +G ++ LCP +P
Sbjct: 292 WVDAASRSSGPSDWSPLTVFGLMRNGDVWALCPFLP 327
>gi|302694227|ref|XP_003036792.1| hypothetical protein SCHCODRAFT_63611 [Schizophyllum commune H4-8]
gi|300110489|gb|EFJ01890.1| hypothetical protein SCHCODRAFT_63611 [Schizophyllum commune H4-8]
Length = 860
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFS 159
+ F + +I++N +G L + G+ + V+ L + R + I C++V VG Q Y +
Sbjct: 105 VQFNIHQIALNPSGKLLAVAGAFQVAVIVLPRSGFMRLVPN---VIDCKSVQVG-QYYHA 160
Query: 160 SSNVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRY--- 214
S + +V WHP+ + + L +++ D R ++++ D +P Q P + R
Sbjct: 161 SKSAAPIAKVDWHPWGEAGSTLMVMTVDGKMREYDVSVDPEEPLQVLSFVPEKKRRMSYL 220
Query: 215 -RNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+ A F+ G G+ W +++ L G +Y +CP +P
Sbjct: 221 AEDPAEREVASFTIGKGNADWGPLTIYALMKSGDVYAVCPYMP 263
>gi|409049923|gb|EKM59400.1| hypothetical protein PHACADRAFT_114086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 864
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 193/500 (38%), Gaps = 91/500 (18%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVSVGSQIYFSSS 161
F + ++++N NG L + G + V+ L + + + ++ C+++ VG Q + +
Sbjct: 106 FNIHQMALNPNGKFLAVAGVSHVAVVVLPRPGFTKLVPT---SVDCKSIHVG-QYFHGTR 161
Query: 162 NVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQP--------VEP 211
+ ++ WHP+ D T L +++ D R +++A D +P+Q P E
Sbjct: 162 DAPPIAKIDWHPWGDGGTTLMVMTVDGKLREYDIAIDTEEPQQVLSFVPEKLRKSFVAED 221
Query: 212 GRYRNAASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGSVY--KWESILEI 268
R AS F+ G G W FSV+ + G IY +CP +P + + LE
Sbjct: 222 DAERQVAS-----FTLGKGKADWGPFSVYAVMRSGDIYAICPYMPKNASVPSSYVHALEC 276
Query: 269 YNDAQTFGLRSVNSLAVRNSSLAISWLE-------ATFPEVAQETIDEGDPPALKAHPHA 321
+ A+ L S +S E A ++ T ++ HP
Sbjct: 277 FVAAKQEFLSQGESSGSPSSGSMTGLYENQHKYVTALLKQLPPGTAYPSKSRSVLMHPPT 336
Query: 322 LFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLVSKDS------------I 369
+ QGP + L++ G++ G A +Y DS +
Sbjct: 337 TMRTQAIRQGPFLL-----QPAPLSIEGSDG-GDATDVVYLAFGADSDEEDEGETERLGV 390
Query: 370 VVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQ 429
V+ ++ G++ + ++++ W +R H A ELP++ + +
Sbjct: 391 VLVAYQDGKVDVFLDVEKVEARW-------------ERKHVRAE-------ELPMLAVYE 430
Query: 430 PLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLH 489
TV LG L ++++ L + G+ DP+ E +Y+ H G+ ++ L
Sbjct: 431 ----TVDLGLVSSLTKISSDQRIL--DLLQGNYPVFLQDPIRDETVYVYHAFGVHALRLA 484
Query: 490 FLPFTSQTRGKDETNR--------------SPSVHPVLNTCQGETSSPSPLCGFVSLSDS 535
L + +D+ + +V P+L T E +P+ G SD
Sbjct: 485 QLLQNLASALRDDISSDGGEALASALDGVGGATVQPILITYSVERVCSNPVVGVAIPSDV 544
Query: 536 FGYSWIVGVTSTQECVVIEM 555
+ I +TS VV+ +
Sbjct: 545 YLTYSIFILTSAMRTVVLPL 564
>gi|296423637|ref|XP_002841360.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637597|emb|CAZ85551.1| unnamed protein product [Tuber melanosporum]
Length = 858
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 103 KLNFEVSRISINRNGSALLLIGSDGL--CVMYLYGRTCSSDNKTIICRTVSVGSQIYFSS 160
+L+FE+ ++ I+R+G L +IG L CV+ G +K + VG Y +S
Sbjct: 99 ELDFEIHQLEISRDGLLLAIIGEKELAVCVLPAEGLARMDGSKLRVPAFNMVGPN-YHNS 157
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRL--FNLASDVM--QPEQEYYLQPVEPGRY 214
R ++ WHP L +L+S+S+ R F + D P+Q + L + GR
Sbjct: 158 EKGSRIVRAIWHPLGVEGASLVVLTSESIVRTYDFTIGQDFTFEIPDQTFDLHAL-GGRA 216
Query: 215 RN------------AASICPVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVVP 255
R+ AAS C FG G W F++++L G +Y L PVVP
Sbjct: 217 RHVGGFFADGEEMEAASCC-----FGDGYQGWRPFTLYILMRGGDVYALTPVVP 265
>gi|291223569|ref|XP_002731784.1| PREDICTED: nucleoporin 88-like [Saccoglossus kowalevskii]
Length = 709
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 29 LQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTS 88
L HPVFS N + +NL+ G S L+ WD Q H ++ L T
Sbjct: 10 LNSHPVFSDLQE-NNAEERLKIDSRNLLEV-GGSELFVWD--PQKSHLLTTNLKNLLDTQ 65
Query: 89 ILAAFPS--KVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSD 141
+ + + + F V I+++ L L G G+ ++ L R
Sbjct: 66 VEQERSNSYQTLLCTNPPRFAVCNIALSPTCCHLALSGQHGVSILELPSRWGKYADFEGG 125
Query: 142 NKTIICRTVSVGSQIYFSSSNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNLASDVMQ 199
I CRT+ + + + + S+V+ LQ SWHP SDTH+ +L+SD++ R+F L +D
Sbjct: 126 KSNINCRTIPIAERFFTTQSSVL-LLQASWHPGSQSDTHIMLLTSDNLLRVFEL-NDPQS 183
Query: 200 PEQEYYL-QPVEPGRYRNAASI------CPVDFSFG----------------GDHLWDRF 236
Q Y L +P P A+ V F FG G +
Sbjct: 184 VYQIYSLGEP--PNNLHTMATFEEVLGEIAVSFDFGPPLESTPCLESTGSSHGKQKAKVY 241
Query: 237 SVFVLFSDGSIYILCPVVPFGSV--YKWESILEIYNDAQ-TFGLRSVNSLAVRNS 288
V+VL +G +Y L + S Y + L +Y A+ +GL + N + + ++
Sbjct: 242 PVYVLRGNGDVYYLTVSMDDQSTVGYAVQGPLSMYPPAEDNYGLDACNIICLHSN 296
>gi|388852249|emb|CCF54060.1| uncharacterized protein [Ustilago hordei]
Length = 1117
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 104 LNFEVSRISINRNGSALLLIGSD--GLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSS 161
++F++ +SIN G L +G L VM G T D + I CRTV + + + S
Sbjct: 120 VDFDIRHLSINPTGKLLACVGDSQIALIVMPRSGYTKHVD-REIACRTVPIAPYYHSAHS 178
Query: 162 NVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPG----RYR 215
N + +V WHP+ + T L +L+ D + R +++A D +P+Q PV+ G R+R
Sbjct: 179 NAAVS-KVDWHPWGENGTSLLVLTDDGLLREYDVAKDAEEPQQIASFLPVDTGAASQRFR 237
Query: 216 N 216
+
Sbjct: 238 S 238
>gi|40286640|emb|CAE85030.1| nucleoporin Nup88A [Xenopus laevis]
Length = 728
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 55 LVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISIN 114
L DG L WD H +++R + T ++ K++ + L F+V+ + ++
Sbjct: 48 LCVLDGD--LLVWDAEECAFHTVTLRSLSVESTGNSSSGEQKLLCTNPPL-FDVNEVLLS 104
Query: 115 RNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRTLQV 169
+ L+GS G+ V+ + +G+ + KT+ CRT+ + +I+ SS++++ Q
Sbjct: 105 PTQHHVALVGSKGVMVLEIPKRWGKKSEFEGGEKTVNCRTIPIAERIFTSSTSLLLK-QA 163
Query: 170 SWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEP-------GR-YRNAAS 219
W+P + HL +L+SD++ RL+NL D+ P + L E GR Y+ +
Sbjct: 164 IWYPSETQEPHLILLTSDNILRLYNL-QDLFTPVKVISLSSAEEDTTLPHNGRSYKASLG 222
Query: 220 ICPVDFSFG---------GDHLWD---RFSVFVLFSDGSIYIL 250
V FG G H + + +++L+ G Y++
Sbjct: 223 ETAVACDFGPLAVLPKGFGQHSKEDTVAYPLYILYETGETYLM 265
>gi|326432300|gb|EGD77870.1| hypothetical protein PTSG_09504 [Salpingoeca sp. ATCC 50818]
Length = 676
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 63 RLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLL 122
RLY W++ A L + + + P A+ +V+ + F V ++ IN GS L
Sbjct: 37 RLYIWNEEASELVVMDLLHRQQAP----ASLEKRVIPVHRTVQFPVRQLHINVTGSLAAL 92
Query: 123 IGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGIL 182
+ + V L R S C+ ++ I S V+ Q WHP+S L +L
Sbjct: 93 VSEQDIQVFDLSVRGPSE------CKELN----IITSGEGVV---QARWHPFSPRALFVL 139
Query: 183 SSDSVFRLFNLAS--DVMQPEQEYYLQPVEPGRYRNAASICPVDFSFGGDHLWDRFSVFV 240
S +R D+ +PE L + A V F FG W+R V+V
Sbjct: 140 S----YRALECYQFPDLDEPEIRLTLPSI------AAPEKEVVAFCFGTGDGWERLCVYV 189
Query: 241 LFSDGSIYILCPVVPFGSVYKWESILEIYNDAQT 274
L +D +I CPV+P S+ LE DA+
Sbjct: 190 LHADTTISSFCPVIPANSLLG-RQYLEQLRDAEA 222
>gi|388580097|gb|EIM20414.1| hypothetical protein WALSEDRAFT_55052 [Wallemia sebi CBS 633.66]
Length = 774
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 175/448 (39%), Gaps = 85/448 (18%)
Query: 145 IICRTVSVGSQIYFSSSNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLASDVMQPEQ 202
I CR++ VG Q Y + +V WHP+S + L +L+ D+ FR ++++ D P+Q
Sbjct: 118 IECRSIQVG-QYYHAIKGSSEIAKVDWHPWSLSASSLMVLTRDANFREYDISIDSEDPQQ 176
Query: 203 E--YYLQPVEPGRYRNAA--------------SICPVDFSFG-GDHLWDRFSVFVLFSDG 245
+ PG N S V F G GD W +++ L +G
Sbjct: 177 SISFVQAAAMPGSVTNQQFSNKSKGFSADDERSTECVSFDIGRGDSDWGPLTLYGLMKNG 236
Query: 246 SIYILCPVVPFGSVYKWESILEIYNDAQTFGLR-SVNSLAVRNSSLAISWLEATFPEVAQ 304
++ +CP +P + I + + ++ + +SL S + WL A V Q
Sbjct: 237 DVFAICPFMPNNAQVPTSYIQNLKGITEAKLMKVTEDSLIEARLSQQMRWLNAV---VKQ 293
Query: 305 ETIDEGDPPALKAHPHALFDSSVSLQGPLRKICHGGEDESLAVRGAECEGRAVSFLYNLV 364
+ E + K +P S+ QGP + DE E E A L +
Sbjct: 294 IKLGEENIAGFKCNP-PRATGSLLRQGPYL-VQPAPTDE-------EYESDASDILI-IR 343
Query: 365 SKD---SIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGE 421
KD I V +++ G++ I + + W+ S+ H PI
Sbjct: 344 PKDCPVDIFVVAFTDGRVDICLEVVKAEGRWS----------SKAESHA----TPPIIST 389
Query: 422 LPVVKLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDG 481
+K+ Q D G+P T+S DP+ ++ IYI H
Sbjct: 390 YESIKILQSHD----FGYP-----------------------TLSKDPIYEDTIYISHAE 422
Query: 482 GIDSVVLHFLPFTSQTRGKDETNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWI 541
G+ ++V F P+ + D R ++ V+ T ++ +P+ ++D++ +
Sbjct: 423 GVHALV--FKPWLDELDQVDSLTRDSTLVHVIRTSTTSSAQSTPIVALDVINDAYLGYLL 480
Query: 542 VGVTSTQECVVIEMKTWNLLLPVQIDSE 569
+T+T + + + +L L VQ D E
Sbjct: 481 FALTNTMQILPL-----DLSLRVQTDPE 503
>gi|156379188|ref|XP_001631340.1| predicted protein [Nematostella vectensis]
gi|156218379|gb|EDO39277.1| predicted protein [Nematostella vectensis]
Length = 671
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
F VS + + G L LIG G+ V+ + +GR + + T+ CRT+ V + +FS+
Sbjct: 83 FNVSSLQFSITGKYLALIGERGITVLEVPQRWGRFAEYEGGSDTVNCRTILVDER-FFST 141
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+ LQ SWHP S D HL +L+SD+ R++N+
Sbjct: 142 HHKAMVLQASWHPESPVDGHLVVLTSDNRLRIYNI 176
>gi|62857607|ref|NP_001016790.1| nucleoporin 88kDa [Xenopus (Silurana) tropicalis]
Length = 726
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 34/223 (15%)
Query: 55 LVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISIN 114
L DG L WD + +C ++VRL S ++ K++ + L FEV+ + ++
Sbjct: 48 LCVLDGD--LLVWD-SEECAF-LTVRLRSLSVESTGSSGEQKLLCTNPPL-FEVNEVLLS 102
Query: 115 RNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRTLQV 169
+ L+GS G+ V+ + +G+ + KT+ CR + + +I+ SS++++ Q
Sbjct: 103 PTQHHVALVGSKGVMVLEIPKRWGKKSEFEGGEKTVNCRAIPIAERIFTSSTSLVLK-QA 161
Query: 170 SWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEP-------GRYRNAA-- 218
W+P + HL +L+SD++ RL+NL D + PE+ L E GR A+
Sbjct: 162 LWYPSETQEPHLILLTSDNILRLYNL-HDPLTPEKVISLSSAEEETTLPHNGRSYKASLG 220
Query: 219 ---------SICPVDFSFGGDHLWDR--FSVFVLFSDGSIYIL 250
+ P+ FG + D + +++L+ G Y++
Sbjct: 221 ETAVACDFGPLTPLPKGFGQYNKEDTVAYPLYILYETGETYLM 263
>gi|148236355|ref|NP_001084403.1| nucleoporin 88kDa [Xenopus laevis]
gi|68534358|gb|AAH99049.1| Nup88A protein [Xenopus laevis]
Length = 728
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 55 LVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISIN 114
L DG L WD H +++R + T ++ K++ + L F+V+ + ++
Sbjct: 48 LCVLDGD--LLVWDAEECAFHTVTLRSLSVESTGSSSSGEQKLLCTNPPL-FDVNEVLLS 104
Query: 115 RNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRTLQV 169
+ L+GS G+ V+ + +G+ + KT+ CRT+ + +I+ SS++++ Q
Sbjct: 105 PTQHHVALVGSKGVMVLEIPKRWGKKSEFEGGEKTVNCRTIPIAERIFTSSTSLLLK-QA 163
Query: 170 SWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEP-------GR-YRNAAS 219
W+P + HL +L+SD++ RL+NL D+ P + L E GR Y+ +
Sbjct: 164 IWYPSETQEPHLILLTSDNILRLYNL-QDLFTPVKVISLSSAEEETTLPHNGRSYKASLG 222
Query: 220 ICPVDFSFG---------GDHLWD---RFSVFVLFSDGSIYIL 250
V FG G H + + +++L+ G Y++
Sbjct: 223 ETAVACDFGPLAVLPKGFGQHSKEDTVAYPLYILYETGETYLM 265
>gi|358060689|dbj|GAA93628.1| hypothetical protein E5Q_00272 [Mixia osmundae IAM 14324]
Length = 1255
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 96 KVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL----YGRTCSSDNKTIICRTVS 151
K + +D+ L FE+ + + NG L ++G L V+ L + S+D I CR V
Sbjct: 140 KTLTSDL-LTFEIDVLVPSPNGRLLAVVGESQLVVLVLPRLGWASRVSAD---IPCRAVP 195
Query: 152 VGSQIYFSSSNVIRTLQVSWHPYSDTH--LGILSSDSVFRLFNLASDVMQPEQ--EYYLQ 207
VG+ + R + WHP+ D + +L++D++ R ++L+ D P Q ++
Sbjct: 196 VGA-YHHGPQGSARIARAIWHPWGDNQSTMLVLTADAILREYDLSRDHQDPVQTLDFSSA 254
Query: 208 PVEPGRYRNA-----------ASICPVDFSFGGDHL--WDRFSVFVLFSDGSIYILCPVV 254
+ P + R + V + G W +++ L +G IY + P +
Sbjct: 255 TLTPSKNRRGRPDGRFSGEEPEAYIAVSLALGAHDAQDWSPLTLYCLMQNGDIYAVAPYL 314
Query: 255 P 255
P
Sbjct: 315 P 315
>gi|405977107|gb|EKC41573.1| Nuclear pore complex protein Nup88 [Crassostrea gigas]
Length = 721
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 62 SRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKL-----NFEVSRISINRN 116
S +Y WD A L +++ + P K R+ L F+V I N++
Sbjct: 45 SDVYVWDGYAAQLLNYNLK--------NFSDSPDKKSRSQTLLCTDPPRFDVDGIDFNQS 96
Query: 117 GSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSW 171
S L + GS G+ V+ + R + C+T SV YF+S ++ LQV+W
Sbjct: 97 KSFLAIWGSSGVMVLEMPQRWGKYSEFEGGKPAVTCKTTSVAEH-YFTSHKSVQLLQVAW 155
Query: 172 HPYS--DTHLGILSSDSVFRLFNL 193
HP S D+H+ +L+SD++ ++L
Sbjct: 156 HPGSETDSHMTLLTSDNLLSTYDL 179
>gi|393215688|gb|EJD01179.1| hypothetical protein FOMMEDRAFT_110790 [Fomitiporia mediterranea
MF3/22]
Length = 842
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSS-DNKTIICRTVSVGSQIYFSSSN 162
++F++ +IS++ N L + G + ++ L S I C+++ +G Y+ S+
Sbjct: 95 IDFDIRQISLSPNKKLLAVAGVSQVALVVLPRAGFSKFGTSRIDCKSLHIGP--YYHSNL 152
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI 220
+++ WHP+ + + L ++++D R +N++ D +P + P + S
Sbjct: 153 SSPLVKIDWHPWGEAGSTLLVMTADGRLREYNVSLDPDEPRKMLDFVP-----EKKHGSF 207
Query: 221 CPVD--------FSFG-GDHLWDRFSVFVLFSDGSIYILCPVVPFGS 258
VD F+FG G W +++ L G IY +CP +P S
Sbjct: 208 AAVDESEREVASFTFGKGKADWGPLTLYALMKSGDIYAICPYLPENS 254
>gi|328792078|ref|XP_001122083.2| PREDICTED: nuclear pore complex protein Nup88 [Apis mellifera]
Length = 695
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 27/171 (15%)
Query: 29 LQKHPVFSAPDAVRNG-GGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPT 87
L KH +F ++NG G L D LY W+ N C+ ++V
Sbjct: 10 LNKHNLFLE---LKNGLSGNIKDTRNILEIRDNV--LYVWNANDSCVMTLNVAASREKDG 64
Query: 88 SILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCS--SDN 142
+L K+ D + FE+ + IN G+ L+L G+ GL +M L +G+ C+
Sbjct: 65 DVLY---QKLRPTDPPI-FEIKHLLINETGTQLVLWGNLGLVIMELPKRWGKDCAFQGGK 120
Query: 143 KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS--DTHLGILSSDSVFRLF 191
K I C + ++ + IR + WHP S D+HL IL+S++ FRL+
Sbjct: 121 KEIRC--------MVYNETIDIR--KARWHPGSTNDSHLLILTSENTFRLY 161
>gi|391344922|ref|XP_003746743.1| PREDICTED: uncharacterized protein LOC100898370 [Metaseiulus
occidentalis]
Length = 650
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 52 PKNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRI 111
P+ LVA + W+ LH + V E + PS+ KL F V +I
Sbjct: 28 PRQLVAH-CKNLFLAWNPGTGSLHAVDVNCTEDHSYEFV---PSR------KLAFNVEQI 77
Query: 112 SINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSW 171
+R+G ALLL G G V+ L + N + C+T +G I + + L W
Sbjct: 78 ESSRSG-ALLLWGPGGAAVVVLPDEIAMTKNSSTKCKTFPIGEIILIQIAG-LEVLAAKW 135
Query: 172 HPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYL--QPVEPGRYRNAASICP----VDF 225
P S + +L++D+ RLF++ S V + +L +P + S +DF
Sbjct: 136 LPDSVNEVVLLTNDNCLRLFDITSRVTHALKAVHLLERPSSLTKINFMISAVTGGQIIDF 195
Query: 226 SFGGDHLWDRFSVFVLFSDGSIY 248
FG VF L + GS+Y
Sbjct: 196 DFG----RSPDEVFCLSTAGSVY 214
>gi|353236143|emb|CCA68144.1| hypothetical protein PIIN_02011 [Piriformospora indica DSM 11827]
Length = 855
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 103 KLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSN 162
++ F + ++ +N +G L + G+ ++ L S I C+++ V + Y+
Sbjct: 15 QVQFTIEQMVLNADGCLLAVAGAHHAAIVVLPSNARGSKAPIIECKSIQV-APYYYGVKG 73
Query: 163 VIRTLQVSWHPYSDTH--LGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI 220
R +++ WHP ++ + L +L++D V + +++ Q + V+ + RN +
Sbjct: 74 SPRVVKIEWHPLAEGYRSLFVLTADGVLKEYDVTVSSDDALQTFNF--VQKRKKRNTFNT 131
Query: 221 C------PVDFSFG----------GDHLWDRFSVFVLFSDGSIYILCPVVP 255
+ FSFG G W +V+ L +G +Y +CPV P
Sbjct: 132 DDPLASEAISFSFGCLSNDRTGARGCSDWTPLTVYGLMRNGDLYAICPVGP 182
>gi|194742353|ref|XP_001953667.1| GF17877 [Drosophila ananassae]
gi|190626704|gb|EDV42228.1| GF17877 [Drosophila ananassae]
Length = 703
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 64 LYYWDQNAQCLHRISVRLGEPDPT-SILAAFPSKVMRADVKLNFEVSRISINRNGSALLL 122
L+ WD CL + R + + LA + + ++ +V R+ ++ GS + L
Sbjct: 39 LFAWDAKDCCLLVRNWRTPLTEAAGAKLAGVQFQTLIPSNTVSLDVDRVLVSNEGSLVAL 98
Query: 123 IGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPY--S 175
G G+CV+ L R + I CR+ S+ SQ++ SS + QV WHP+ S
Sbjct: 99 SGEHGVCVLELPRRWGQDGYYKDGKERITCRSFSLDSQLFLSSPQ-LEVRQVRWHPHSVS 157
Query: 176 DTHLGILSSDSVFRLFN 192
D+ L +L +++ R++N
Sbjct: 158 DSTLLVLLNNNTIRVYN 174
>gi|147899452|ref|NP_001084401.1| nucleoporin 88kDa [Xenopus laevis]
gi|50417504|gb|AAH77397.1| Nup88B protein [Xenopus laevis]
Length = 726
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 29 LQKHPVFSA-------PDAVRNGGGKFNGAPKNL----VAWDGASRLYYWDQNAQCLHRI 77
L +H +FS + +R G + K L DG L WD + +C +
Sbjct: 11 LSEHALFSRLKERLRDHEELREKGERRARKDKQLRNLLCVLDGD--LLVWD-SEECAF-L 66
Query: 78 SVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYL---Y 134
+VRL S ++ K++ + L FEV+ + ++ + L+GS G+ V+ + +
Sbjct: 67 TVRLRSLSGESTGSSGEQKLLCTNPPL-FEVNDVLLSPTQHHVALVGSKGVMVLEIPKRW 125
Query: 135 GRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRTLQVSWHP--YSDTHLGILSSDSVFRL 190
G+ + KT+ CRT+ + +I+ SS++++ Q W+P + HL +L+SDS+ RL
Sbjct: 126 GKKSEFEGGEKTVNCRTMPIAERIFTSSTSLVLK-QAIWYPSETQEPHLILLTSDSILRL 184
Query: 191 FNL 193
+NL
Sbjct: 185 YNL 187
>gi|406606560|emb|CCH42059.1| Nucleoporin [Wickerhamomyces ciferrii]
Length = 712
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL-YGRTCSSDNKTIICRTVSVGSQIYFSSSN 162
L+F++ + +N +G+ L + V+ L + R S+ I + +GS IY S++
Sbjct: 64 LDFDIHGLQLNSSGTLLTAYDEKSIIVISLSFNRATKSEENEIKTNSFKIGSSIYNKSNH 123
Query: 163 VIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI 220
+I+ L W+ S D+ L +LSSD R FN+ P+ + L+ + + +
Sbjct: 124 IIQLL---WNKLSRFDSSLLVLSSDGAIRTFNIRLSPDHPDSIFDLKQTHSRKIGLSENT 180
Query: 221 C--PVDFSFGG-DHLWDRFSVFVLFSDGSIYILCPVV 254
P+ FG + L ++++L +G I+ + P V
Sbjct: 181 INDPISMCFGNSETLSGALTLYILNKEGDIFAIYPFV 217
>gi|125773619|ref|XP_001358068.1| GA19884 [Drosophila pseudoobscura pseudoobscura]
gi|54637803|gb|EAL27205.1| GA19884 [Drosophila pseudoobscura pseudoobscura]
Length = 698
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 38/180 (21%)
Query: 64 LYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFE-----------VSRIS 112
L+ WD N CL ++ R P V D K+N++ + R++
Sbjct: 38 LFAWDANECCLLVMNWR------------SPLTVAEQDAKVNYQTLVPSIPIILDIDRVT 85
Query: 113 INRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTL 167
++ S + L G G+C++ L R K I CRT + S + F ++N +
Sbjct: 86 VSNECSLVALSGPRGVCILELPRRWGLDGYFMDGKKQITCRTYCLDS-LLFQNNNHLEVR 144
Query: 168 QVSWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDF 225
QV WHP SD+ L +L +++ R++N + + ++ V P +N A+ DF
Sbjct: 145 QVRWHPNSVSDSTLLVLLNNNTIRMYNHS-------KLRHVWQVGPLTMKNGANTSLTDF 197
>gi|195166222|ref|XP_002023934.1| GL27340 [Drosophila persimilis]
gi|194106094|gb|EDW28137.1| GL27340 [Drosophila persimilis]
Length = 698
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 38/180 (21%)
Query: 64 LYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFE-----------VSRIS 112
L+ WD N CL ++ R P V D K+N++ V R++
Sbjct: 38 LFAWDANECCLLVMNWR------------SPLTVAEQDAKVNYQTLVPSIPIILDVDRVT 85
Query: 113 INRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTL 167
++ S + L G G+C++ L R K I CRT + S + F ++N +
Sbjct: 86 VSNECSLVALSGPCGVCILELPRRWGLDGYFMDGKKQITCRTYCLDS-LLFQNNNHLEVR 144
Query: 168 QVSWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDF 225
QV WHP SD+ L +L +++ R++N + + ++ V P +N A+ DF
Sbjct: 145 QVRWHPNSVSDSTLLVLLNNNTIRMYNHS-------KLRHVWQVGPLTMKNGANTSLTDF 197
>gi|40286642|emb|CAE85031.1| nucleoporin Nup88B [Xenopus laevis]
Length = 726
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 29/172 (16%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FEV+ + ++ + L+GS G+ V+ + +G+ + KT+ CRT+ + +I+ SS
Sbjct: 94 FEVNDVLLSPTQHHVALVGSKGVMVLEIPKRWGKKSEFEGGEKTVNCRTMPIAERIFTSS 153
Query: 161 SNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQ--------PVE 210
++++ Q W+P + HL +L+SDS+ RL+NL D + P + L P
Sbjct: 154 TSLVLK-QAIWYPSETQEPHLILLTSDSILRLYNL-QDPLTPVKVTSLSSAVKETTLPHN 211
Query: 211 PGRYRNAASICPVDFSFG---------GDHLWDRF---SVFVLFSDGSIYIL 250
++ + S V FG G H + F +++L+ G Y++
Sbjct: 212 GQSFKASLSETAVACDFGPLAALPKGFGQHSKEDFVAYPLYILYETGETYLI 263
>gi|393246040|gb|EJD53549.1| hypothetical protein AURDEDRAFT_80006 [Auricularia delicata
TFB-10046 SS5]
Length = 813
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 193/489 (39%), Gaps = 75/489 (15%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYL-YGRTCSSDNKTIICRTVSVGSQIYFSSSN 162
L F V ++ + NG L + G + V+ L S+++ + +++++G + +
Sbjct: 88 LGFAVYQLLPSPNGKLLAVAGLHQVVVVVLPRPGYWKSESQRVAVKSLTLGER-HHKRKG 146
Query: 163 VIRTLQVSWHPYSDTHLGIL--SSDSVFRLFNLASDVMQPEQEYYLQPVEPGR--YRNAA 218
R +++ WH + + +L ++D V R ++ + + +P+Q P + + +A+
Sbjct: 147 SPRVVKLDWHSWGEHGATLLVGTADGVVREYDASQNPDEPQQTISFMPPQTRKTFLADAS 206
Query: 219 SICPVDFSFGGDHL-WDRFSVFVLFSDGSIYILCPVVPFGSV----YKWESILEIYNDAQ 273
+ V F+ GG + W +++ L +G +Y + P +P + Y W + +
Sbjct: 207 TRELVSFTLGGGNADWGPLTLYGLMKNGDVYAIAPYMPARAAVPPSYLWSLQYYVQEKLE 266
Query: 274 TFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGPL 333
R + ++ L + P Q+ + P + A P A F V+ QGP
Sbjct: 267 AAHRRPGFAALYEQQLKYVTALTSQLP--PQKVLANAKPAVVAAPPPARFH--VARQGPF 322
Query: 334 RKICHGGEDESLAVRGAECEGRAVSFLY-----NLVSKDS--------IVVTSWSGGQLQ 380
E LA AV +Y V KDS +++ SW G++
Sbjct: 323 ---LLQPEPHELA---GSVSDDAVDIMYVGLQLKNVEKDSEAPAEQLGVILISWQDGKID 376
Query: 381 IDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVVKLDQPLDHTVWLGHP 440
I D+++ W HG + S ELP+ + + +D LG
Sbjct: 377 ICLDLDKVEARWE---------------HG-----QVPSDELPLFTVFETID----LGLI 412
Query: 441 PPLLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLH------FLPFT 494
P L + ++ S + IDPL + IY+ H G+ ++L
Sbjct: 413 PALNKAGMNSF---EDVLSANFPLFHIDPLYNDTIYVYHSFGVHCLLLRRWVNMLLGALH 469
Query: 495 SQTRGKDETNRSPSVHPVLNT---CQGETSSPS-----PLCGFVSLSDSFGYSWIVGVTS 546
+ +G+D SV T C ++ SPS P+ G ++ + ++ VTS
Sbjct: 470 GEDKGEDAARVESSVEKARGTDAFCILDSFSPSEKSSVPIIGVALPNNVYLPYSLLTVTS 529
Query: 547 TQECVVIEM 555
+ +C E+
Sbjct: 530 SMQCSSFEL 538
>gi|405120044|gb|AFR94815.1| hypothetical protein CNAG_01330 [Cryptococcus neoformans var.
grubii H99]
Length = 850
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVG-SQIYFSSSN 162
L F + I +N G L ++G + V+ L T S + + S+ FS S+
Sbjct: 96 LTFAIHHIVVNPTGRLLAVVGHHQIVVLVLPKSTHSGKLEEGLTEVESIPIDNFLFSRSS 155
Query: 163 VIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI 220
QV WHP+ + L +L++ R + DV+QP P R R+
Sbjct: 156 NDAITQVQWHPWGENGNSLWVLTAAGRLREY----DVLQPHDCVQTFDFIPERTRSVPKF 211
Query: 221 CPVD--------FSFGGDHL-WDRFSVFVLFSDGSIYILCPVVPF 256
VD F+FG + + V+ L + G I++L P++P
Sbjct: 212 TAVDPLSRYASSFAFGSSMIGFSPLMVYCLLASGDIHVLGPILPL 256
>gi|347965446|ref|XP_001689384.2| AGAP001179-PA [Anopheles gambiae str. PEST]
gi|333470506|gb|EDO63289.2| AGAP001179-PA [Anopheles gambiae str. PEST]
Length = 823
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 105 NFEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFS 159
NF V +I + +G+ L L G G+ ++ L R + + IICR ++ + F+
Sbjct: 79 NFTVEKILPSTDGTFLALAGPKGVSIIELPRRWGPSGQYQNGKECIICRAYNLDEHL-FT 137
Query: 160 SSNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLAS 195
S + LQ+ WHP S D+HL L SD+ R++++ S
Sbjct: 138 ESATLELLQIRWHPASPTDSHLLALLSDNSIRVYDVDS 175
>gi|449018154|dbj|BAM81556.1| hypothetical protein CYME_CMO203C [Cyanidioschyzon merolae strain
10D]
Length = 928
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 48/238 (20%)
Query: 67 WDQNAQCLHRISVRLGEPDPTSILAAFPSKV---MRADVKLNFEVSRISINRNGSALLLI 123
W NA+ L R + RLGE T + + + L F+ +++ + L L
Sbjct: 57 WLTNAEELWRSAQRLGEESRTEFFVSSSGTLGTPVHLTPALRFKPIACALSSSDRFLALY 116
Query: 124 GSDGLCVMYLYGRTCSSD------NKTIICRTVSVGSQIYFSSSNVIRTL-QVSWHPYSD 176
+ V+ L S + V +GS+ ++ +R++ QVSWHP+SD
Sbjct: 117 DEEFCAVVDLQTVPSSQTWLDQIAPAPVTAPAVLLGSRTSQRAAFTLRSIRQVSWHPWSD 176
Query: 177 THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAA------------------ 218
L IL D + L++ + PEQ ++ G AA
Sbjct: 177 GRLAILYDDGMLELYDTLEATL-PEQTLRIRLPLSGSEAPAATGVEDTTVASVSIQNVSG 235
Query: 219 -------------SICPVDFSFG-----GDHLWDRFSVFVLF-SDGSIYILCPVVPFG 257
+ P F+FG ++ W+ ++++L SDG+++ILCP P G
Sbjct: 236 ALEQTAGQRTLVKTEAPAAFAFGPLTEPSEYPWELVTLYLLRESDGALFILCPFAPTG 293
>gi|260803671|ref|XP_002596713.1| hypothetical protein BRAFLDRAFT_122018 [Branchiostoma floridae]
gi|229281972|gb|EEN52725.1| hypothetical protein BRAFLDRAFT_122018 [Branchiostoma floridae]
Length = 733
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 107 EVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSS 161
+V + + G+ + L G G+ +M + +G+ + + CR+ V ++ F++
Sbjct: 91 DVHHVKFSLTGNHVALWGPGGVSIMEVPRRWGKHAEFEGGKDKVNCRSYPVAERL-FATQ 149
Query: 162 NVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAAS 219
+ ++ LQV WHP S DTHL IL+SD+V R++ D+ +P+ Y Q + G + ++ S
Sbjct: 150 SSLQLLQVDWHPGSPSDTHLVILTSDNVLRIY----DIEKPDSPY--QSFQLGEFADSFS 203
Query: 220 I 220
+
Sbjct: 204 L 204
>gi|195390167|ref|XP_002053740.1| GJ24058 [Drosophila virilis]
gi|194151826|gb|EDW67260.1| GJ24058 [Drosophila virilis]
Length = 705
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 64 LYYWDQNAQCLHRIS--VRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALL 121
LY W+ + CL + V L +P+P ++ + + + LN V R+ ++ GS +
Sbjct: 39 LYAWNSSDSCLLVTNWRVALLQPEPKRAKVSYQTLIPSNSIGLN--VDRVVVSHEGSLVA 96
Query: 122 LIGSDGLCVMYLYGRT----CSSDNK-TIICRTVSVGSQIYFSSSNVIRTLQVSWHP--Y 174
L G G+ ++ + R+ C D K CRT ++ + + F ++ + Q+ WHP
Sbjct: 97 LSGPRGVTILDVPRRSGPDGCFMDGKPQTTCRTYNLDA-LLFQNNPQLEVRQLRWHPDSV 155
Query: 175 SDTHLGILSSDSVFRLFNLA 194
SD+ L +L S++ R++N A
Sbjct: 156 SDSTLLVLLSNNTMRVYNHA 175
>gi|47227878|emb|CAG09041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 654
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FEV R+ ++ + + LIG G+ V+ L R + I C+T V + + SS
Sbjct: 78 FEVQRVLLSPSQLHVALIGQRGVSVLELPQRWGKRSQFEGGKRDINCKTTPVAERFFTSS 137
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR----- 213
+V+ QV+W+P D HL +L+SD+ R ++L S P+ + P+ G
Sbjct: 138 PSVV-LRQVAWYPSEAGDPHLVLLTSDNTIRFYSLTS----PQTPSKVLPLTQGEDDSAG 192
Query: 214 ------YRNAASICPVDFSFG-------------GDHLWDRFSVFVLFSDGSIYI 249
Y + V F FG +HL + ++VL+ +G Y+
Sbjct: 193 HPQARSYAASLGEIAVAFDFGPLSSSTRKTSGRSREHLV--YPLYVLYENGETYL 245
>gi|118382015|ref|XP_001024167.1| hypothetical protein TTHERM_00455610 [Tetrahymena thermophila]
gi|89305934|gb|EAS03922.1| hypothetical protein TTHERM_00455610 [Tetrahymena thermophila
SB210]
Length = 923
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 20/108 (18%)
Query: 167 LQVSWHPYSDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPV------EPGRYRNAASI 220
L + +H S HL +L D F ++NL S + E ++ LQ + E Y+ +
Sbjct: 210 LSIKFHKLSPHHLAVLLDDQYFCVYNLQSSLSYQEVQFNLQQLPRFGRNEEYNYQEKGQV 269
Query: 221 CPVDFSFGGDHL--------------WDRFSVFVLFSDGSIYILCPVV 254
VDF FGG+ +D SV+ L DG IY P +
Sbjct: 270 QFVDFEFGGNSFFTSYSKTNFQIPSDFDFLSVYFLTEDGQIYYQSPFL 317
>gi|195053632|ref|XP_001993730.1| GH19600 [Drosophila grimshawi]
gi|193895600|gb|EDV94466.1| GH19600 [Drosophila grimshawi]
Length = 701
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 27/146 (18%)
Query: 64 LYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVK---------LNFEVSRISIN 114
LY WD N CL + R S+L +K RA V + V R++ +
Sbjct: 40 LYAWDSNESCLLVTNWR------ASLLQQEATK--RAKVSYQTLIPSHTVGLHVERVNAS 91
Query: 115 RNGSALLLIGSDGLCVMYLYGRTCSSDNK------TIICRTVSVGSQIYFSSSNVIRTLQ 168
+ GS + L G G+ ++ + R C D +I CRT ++ +Q+ F S+ + Q
Sbjct: 92 QEGSLVALSGPRGVFILEV-PRRCGPDGNFMDGKPSITCRTYNLDAQL-FKSNPQLEVRQ 149
Query: 169 VSWHP--YSDTHLGILSSDSVFRLFN 192
+ WHP SD+ L +L S++ R++N
Sbjct: 150 LRWHPDSVSDSTLLVLLSNNTIRVYN 175
>gi|346468139|gb|AEO33914.1| hypothetical protein [Amblyomma maculatum]
Length = 666
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 120 LLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDT-- 177
LLL G G+ V+ L + N+ +CR+ ++G + +V + V+WHP S++
Sbjct: 85 LLLTGPRGMTVVALPKTPATQLNEKELCRSWTLGEHFFLCHKSV-SLVDVAWHPDSESGC 143
Query: 178 HLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGR-YRNAASI----CPVDFSFGGDHL 232
H+ L++D+ RL+ D+ +P+ + P+ + NA S+ V F F GD
Sbjct: 144 HVLALTNDNNLRLY----DIAEPQSAQLVLPLGGNQSLTNAISVSVGDAAVSFDF-GDLS 198
Query: 233 WDRFS--VFVLFSDGSIYI 249
D + VFVL G IY+
Sbjct: 199 SDGKTRQVFVLMGSGDIYL 217
>gi|58267050|ref|XP_570681.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110624|ref|XP_776139.1| hypothetical protein CNBD1860 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258807|gb|EAL21492.1| hypothetical protein CNBD1860 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226914|gb|AAW43374.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 850
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSS--DNKTIICRTVSVGSQIYFSSS 161
L F + I +N G L ++G + V+ L T S + ++ + ++ SS
Sbjct: 96 LTFAIHHIVVNPTGRLLAVVGHHQIVVLVLPKPTHSGKLEEGQAEVESIPIDDFLFSRSS 155
Query: 162 NVIRTLQVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAAS 219
N T QV WHP+ + L +L++ R + DV+QP P R R+
Sbjct: 156 NDAIT-QVQWHPWGENGNSLWVLTAGGKLREY----DVLQPHDCVQTFDFIPERTRSVPK 210
Query: 220 ICPVD--------FSFGGDHL-WDRFSVFVLFSDGSIYILCPVVPF 256
VD F+FG + + V+ L + G I++L P++P
Sbjct: 211 FTAVDPLSRYASSFAFGSSMIGFSPLMVYCLLASGDIHVLGPILPL 256
>gi|194901654|ref|XP_001980367.1| GG17108 [Drosophila erecta]
gi|190652070|gb|EDV49325.1| GG17108 [Drosophila erecta]
Length = 703
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 64 LYYWDQNAQCLHRISVR--LGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALL 121
L+ WD CL + R L PS ++ EV + + GS +
Sbjct: 39 LFAWDAKDSCLLVRNWRSSLAAEVKVKFQTLIPSSLV------TIEVDHVLASNEGSLVA 92
Query: 122 LIGSDGLCVMYLYGR----TCSSDNKTII-CRTVSVGSQIYFSSSNVIRTLQVSWHPY-- 174
L G G+ +M L R C D K +I CRT + +Q++ ++ ++ QV WHP+
Sbjct: 93 LSGQRGVTIMELPRRWGPDGCYKDAKPMITCRTFGLDTQLFLNNP-LLEVRQVRWHPHSV 151
Query: 175 SDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASICPVDF 225
SD+ L +L +++ R++N + + Y+ V P R+ A+ DF
Sbjct: 152 SDSTLLVLLNNNTIRVYNHS-------KLRYVWQVGPSVLRSGANNSLCDF 195
>gi|193610821|ref|XP_001949727.1| PREDICTED: nuclear pore complex protein Nup88-like [Acyrthosiphon
pisum]
Length = 697
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRIS 112
+NL+A+ LY W+ + CL+ + + + S FP F+V I
Sbjct: 32 RNLIAYKDQI-LYIWNPDECCLYSLLLNTVHEEQPSYQKLFPGSPPL------FDVDEIL 84
Query: 113 INRNGSALLLIGSDGLCVMYLYGR--------TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
IN G+ L+GS G+ VM R T S + I C T S+ +F + ++
Sbjct: 85 INEPGTLCALVGSKGVSVMRFPKRMGSKSLYDTSGSLGEGITCST-SLLQDKFFITKHLT 143
Query: 165 RTLQVSWHPYS--DTHLGILSSD-SVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASIC 221
+V W+P S D HL +L+++ + RLF + + + L P + R +
Sbjct: 144 DVKRVRWYPGSPEDNHLVVLTNNKNCLRLFKVDKGTGKLVSIWRLGP-QTSRILASLGDT 202
Query: 222 PVDFSFG 228
VDF F
Sbjct: 203 AVDFDFA 209
>gi|195500568|ref|XP_002097427.1| GE24497 [Drosophila yakuba]
gi|194183528|gb|EDW97139.1| GE24497 [Drosophila yakuba]
Length = 704
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 98 MRADVKLNF-----------EVSRISINRNGSALLLIGSDGLCVMYLYGR----TCSSDN 142
+ ADVK+ F EV R+ + GS + L G G+ +M L R D
Sbjct: 58 LAADVKVKFQTLIPSSLVTLEVDRVLASNEGSLVALSGPRGVIIMELPRRWGPDGYYKDG 117
Query: 143 KTII-CRTVSVGSQIYFSSSNVIRTLQVSWHPY--SDTHLGILSSDSVFRLFN 192
K +I CRT + +Q++ ++ + + QV WHP+ SD+ L +L +++ R++N
Sbjct: 118 KPMITCRTFGLDTQLFLNNPH-LEVRQVRWHPHSVSDSTLLVLLNNNTIRVYN 169
>gi|383854205|ref|XP_003702612.1| PREDICTED: nuclear pore complex protein Nup88-like [Megachile
rotundata]
Length = 703
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 64 LYYWDQNAQCLHRISVRL--GEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALL 121
LY W+ C+ ++V GE + F K++ D + F++ + IN G+ L
Sbjct: 41 LYVWNAKDFCVMTLNVATTRGENEED----VFYQKLLLTDPPI-FDIKNLLINETGTQLA 95
Query: 122 LIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS- 175
L G+ G+ +M L R T + I+C V +F ++ IR + WHP S
Sbjct: 96 LWGNLGIVLMELPKRWGKDGTFQGGKEEILC---IVHKFDHFDATVEIR--KARWHPGST 150
Query: 176 -DTHLGILSSDSVFRLF 191
D+HL +L+S++ FRL+
Sbjct: 151 NDSHLLVLTSENTFRLY 167
>gi|345569024|gb|EGX51893.1| hypothetical protein AOL_s00043g627 [Arthrobotrys oligospora ATCC
24927]
Length = 814
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 103/531 (19%), Positives = 206/531 (38%), Gaps = 108/531 (20%)
Query: 104 LNFEVSRISINRNGSALLLIGSD--GLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSS 161
L+FE+S+I + +G +++G G+ ++ G I + + + S
Sbjct: 96 LDFEISQIIRSADGETAVVVGEYDVGVALLPAPGVITLGARSKIALKCFKLEPAPTQTPS 155
Query: 162 NVIRTLQVSWHPY-SDTHLGILSSDSVFRL----FNLASDVMQPEQEYYLQPVEPGRYRN 216
V+R + +HP + + +L+ D++ + FN S ++P + ++ + G RN
Sbjct: 156 RVLRAI---FHPLGARPCVVVLTEDAMINVYEVEFNKESATVEPTETLDIKQM-LGIDRN 211
Query: 217 AA----SICPVDFSFGG-DHLWDRFSVFVLFSDGSIYILCPVVP--------FGSVYKWE 263
++ I P FGG +W F++++L +G IY LCP +P F K+E
Sbjct: 212 SSYLMDDIEPTSICFGGVGSIWSIFTLYILMRNGEIYSLCPFLPSKWMLDTDFLDELKYE 271
Query: 264 SILEIYNDAQTFGLRSVNSLAVRNSSLAISWLEATFPEVAQETIDEGDPPALKAHPHALF 323
L+ + + + G ++ + NS W+ + +++ G H F
Sbjct: 272 --LQAHKEIRDSGDPAIPASDKHNSKQICFWIHEISRLIRVQSLANG---------HDEF 320
Query: 324 DS----------------SVSLQGP--LRKICHGGEDESLAVRGAECEGRAVSFLYNLVS 365
D + LQGP L+ DES+ G A
Sbjct: 321 DEEPVGYILSRPTLPDLITPLLQGPYLLQPAPEDNFDESIFASDIARIGAA--------- 371
Query: 366 KDSIVVTSWSGGQLQIDALADEIQPVWTVNIPPRLRVDSQDRIHGLAMICEPISGELPVV 425
+++ +WS G++ + + + P W S L
Sbjct: 372 HYAVIAVAWSSGKIDLMLEFESVAPRWH-------------------------STSLKYK 406
Query: 426 KLDQPLDHTVWLGHPPPLLRLATVDLALPKNTESGSII--TMSIDPLMQERIYIVHDGGI 483
K ++ + V G+ T+++ALP+ TE S I + ++D + H G+
Sbjct: 407 KFNERTPYPVISGY-------ETINIALPEATEGSSAIHPSFTVDINFPNTLLFSHGSGV 459
Query: 484 DSVVLH-FLPFTSQTRGKDETNRSPSVH-------PVLNTCQGETSSPS-PLCGFVSLSD 534
+ + L ++ + ++E R+ V++ G+ ++P P+ G + D
Sbjct: 460 EMLNLEDWMNKLTAVIDQEEDERAIETALAKSERTGVIHMIGGQKNAPRYPVVGTAMIYD 519
Query: 535 SF-GYSWIVGVTSTQECVVIEMKTWNLLLPVQIDSEKKSVDLGAKKERDTP 584
++ GY I TS V+++ + +++ E+ DL + R TP
Sbjct: 520 AYLGYLLIGATTSKPAFAVLQLPSKYHTQMLKLKQERS--DLSSTSSRLTP 568
>gi|28865878|emb|CAD58713.1| 88kDa nucleoporin protein [Mus musculus]
Length = 747
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLN---FEVS 109
+NLV G L+ WD + VRL P P+ P + + +N FE+
Sbjct: 60 RNLVFGLGGE-LFLWDAEGSAF--LVVRL--PGPSGGGVEPPLSQYQRLLCINPPLFEIH 114
Query: 110 RISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIGS GL + L R T+ C T+ + + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|348561093|ref|XP_003466347.1| PREDICTED: nuclear pore complex protein Nup88-like [Cavia
porcellus]
Length = 743
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVR---LGEPDPTSILAAFPSKVMRADVKLNFEVS 109
KN+V G L+ WD C + +R G P+ L+ + K++ + L FE+
Sbjct: 60 KNIVFGLGGE-LFLWDGEGSCFLVVRLRGLSSGSKQPS--LSHY-QKLLCINPPL-FEIY 114
Query: 110 RISINRNGSALLLIGSDGLCVMYL---YGRTCSSDNK--TIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIG+ GL V+ L +G+ + T+ C T + + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGAKGLMVLELPKRWGKNSEFEGGKVTVNCSTTPIAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|351710624|gb|EHB13543.1| Nuclear pore complex protein Nup88 [Heterocephalus glaber]
Length = 743
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVR---LGEPDPTSILAAFPSKVMRADVKLNFEVS 109
+NLV G L+ WD C + +R G +P+ L+ + +++ + L FE+
Sbjct: 60 RNLVFGLGGE-LFLWDGEGSCFLVVRLRGLSSGGEEPS--LSRY-QRLLCINPPL-FEIY 114
Query: 110 RISINRNGSALLLIGSDGLCVMYL---YGRTCSSDNK--TIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIG+ GL V+ L +G+ + T+ C T V + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGTKGLTVLELPKRWGKNSEFEGGKVTVNCSTTPVAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|16758978|ref|NP_446068.1| nuclear pore complex protein Nup88 [Rattus norvegicus]
gi|25008851|sp|O08658.1|NUP88_RAT RecName: Full=Nuclear pore complex protein Nup88; AltName: Full=88
kDa nucleoporin; AltName: Full=Nucleoporin Nup84;
AltName: Full=Nucleoporin Nup88
gi|1943749|gb|AAB52419.1| nucleoporin Nup84 [Rattus norvegicus]
gi|48735110|gb|AAH72524.1| Nucleoporin 88kDa [Rattus norvegicus]
gi|149053244|gb|EDM05061.1| nucleoporin 88, isoform CRA_a [Rattus norvegicus]
Length = 742
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLN---FEVS 109
+NLV G L+ WD + VRL P S+ S+ R + +N FE+
Sbjct: 60 RNLVFGLGGE-LFLWDAEGSAF--LVVRLRGPSGGSVEPPL-SQYQRL-LCINPPLFEIH 114
Query: 110 RISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIG+ GL + L R T+ C T+ + + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGTKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|148680681|gb|EDL12628.1| nucleoporin 88, isoform CRA_c [Mus musculus]
Length = 551
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSI---LAAFPSKVMRADVKLNFEVS 109
+NLV G L+ WD + VRL P + L+ + +++ + L FE+
Sbjct: 62 RNLVFGLGG-ELFLWDAEGSAF--LVVRLRGPSGGGVEPPLSQY-QRLLCINPPL-FEIH 116
Query: 110 RISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIGS GL + L R T+ C T+ + + +F+SS +
Sbjct: 117 QVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTSSTSL 175
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 176 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 206
>gi|111955409|ref|NP_765982.2| nuclear pore complex protein Nup88 isoform 1 [Mus musculus]
gi|21410716|gb|AAH32929.1| Nucleoporin 88 [Mus musculus]
gi|74141219|dbj|BAE35919.1| unnamed protein product [Mus musculus]
gi|148680680|gb|EDL12627.1| nucleoporin 88, isoform CRA_b [Mus musculus]
Length = 742
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIGS GL + L R T+ C T+ + + +F+S
Sbjct: 111 FEIHQVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTS 169
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 170 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|332028028|gb|EGI68079.1| Nuclear pore complex protein Nup88 [Acromyrmex echinatior]
Length = 622
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FEV+ + IN + L L G G+ +M L R K I+C + G + ++
Sbjct: 10 FEVANVLINETATQLTLWGRLGIAIMKLPKRWGKDAVYEGGKKEILCMNHNFGD--FGAT 67
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLF 191
+ + RT WHP S D+HL +L+S++ FRL+
Sbjct: 68 TEIQRT---RWHPGSTNDSHLLVLTSENSFRLY 97
>gi|26341574|dbj|BAC34449.1| unnamed protein product [Mus musculus]
Length = 549
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSI---LAAFPSKVMRADVKLNFEVS 109
+NLV G L+ WD + VRL P + L+ + +++ + L FE+
Sbjct: 60 RNLVFGLGG-ELFLWDAEGSAF--LVVRLRGPSGGGVEPPLSQY-QRLLCINPPL-FEIH 114
Query: 110 RISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIGS GL + L R T+ C T+ + + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|448824843|ref|NP_001263335.1| nuclear pore complex protein Nup88 isoform 3 [Mus musculus]
gi|148680683|gb|EDL12630.1| nucleoporin 88, isoform CRA_e [Mus musculus]
Length = 747
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIGS GL + L R T+ C T+ + + +F+S
Sbjct: 111 FEIHQVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTS 169
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 170 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|74147443|dbj|BAE38633.1| unnamed protein product [Mus musculus]
Length = 747
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIGS GL + L R T+ C T+ + + +F+S
Sbjct: 111 FEIHQVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTS 169
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 170 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|134053894|ref|NP_001076800.1| nuclear pore complex protein Nup88 isoform 2 [Mus musculus]
gi|51316459|sp|Q8CEC0.1|NUP88_MOUSE RecName: Full=Nuclear pore complex protein Nup88; AltName: Full=88
kDa nucleoporin; AltName: Full=Nucleoporin Nup88
gi|26324512|dbj|BAC26010.1| unnamed protein product [Mus musculus]
Length = 753
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIGS GL + L R T+ C T+ + + +F+S
Sbjct: 111 FEIHQVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTS 169
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 170 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|148680682|gb|EDL12629.1| nucleoporin 88, isoform CRA_d [Mus musculus]
Length = 755
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIGS GL + L R T+ C T+ + + +F+S
Sbjct: 113 FEIHQVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTS 171
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 172 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 206
>gi|26332967|dbj|BAC30201.1| unnamed protein product [Mus musculus]
Length = 462
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVRLGEPDPTSI---LAAFPSKVMRADVKLNFEVS 109
+NLV G L+ WD + VRL P + L+ + +++ + L FE+
Sbjct: 60 RNLVFGLGG-ELFLWDAEGSAF--LVVRLRGPSGGGVEPPLSQY-QRLLCINPPL-FEIH 114
Query: 110 RISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVI 164
++ ++ + LIGS GL + L R T+ C T+ + + +F+SS +
Sbjct: 115 QVLLSPTQHHVALIGSKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAER-FFTSSTSL 173
Query: 165 RTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 174 TLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 204
>gi|350401615|ref|XP_003486209.1| PREDICTED: nuclear pore complex protein Nup88-like [Bombus
impatiens]
Length = 697
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 28/138 (20%)
Query: 64 LYYWDQNAQCLHRISVRL--GEPDPTSILAAFPSKVMR-ADVKLNFEVSRISINRNGSAL 120
LY W+ C+ ++V G+ D P + +R D+ + FE+ + IN G+ L
Sbjct: 41 LYVWNPKEFCVMALNVAAARGKND-------VPYQKLRPTDIPI-FEIKNLLINETGTQL 92
Query: 121 LLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS 175
L G+ GL +M L R + I+C I ++ + IR + WHP S
Sbjct: 93 ALWGNLGLVLMELPKRWGKDAMFQGGKEEILC--------IVYNETISIR--KARWHPGS 142
Query: 176 --DTHLGILSSDSVFRLF 191
D+HL +L+S++ FRL+
Sbjct: 143 TNDSHLLVLTSENTFRLY 160
>gi|270008480|gb|EFA04928.1| hypothetical protein TcasGA2_TC014994 [Tribolium castaneum]
Length = 846
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL-------ASDVMQPEQEYYLQPVEP 211
S+V++ QV +HP S +TH+ L+SD+ RL+N+ S V E + P
Sbjct: 306 SDVVQVRQVRFHPGSPRNTHIVALTSDNTLRLYNIENRSAVSVSKVTIGETPIGVFPGTK 365
Query: 212 GRYRNAASICPVDFSFGGDHLWD----------RFSVFVLFSDGSIYILCPVVPFGSVYK 261
+ A VDF FG + ++ VFVL DGS+Y + VP K
Sbjct: 366 TSFLAAFGEVGVDFDFGQPEITKSPTNDETQELQWPVFVLRGDGSVYSV--TVPLEPKAK 423
Query: 262 W 262
W
Sbjct: 424 W 424
>gi|343959670|dbj|BAK63692.1| nuclear pore complex protein Nup88 [Pan troglodytes]
Length = 740
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL------ASDVMQPEQEYYLQPVEPG 212
S + +W+P D H+ +L+SD+V R+++L + ++ E E + G
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSLREPQTPTNVIILSEAEEESLVLNKG 227
Query: 213 RYRNAASICPVDFSFG----------GDHLWDR---FSVFVLFSDGSIYI 249
Y + V F FG G + D + +++L+ +G ++
Sbjct: 228 AYTASLGETAVAFDFGPLAAVPKTLFGQNGKDEVVAYPLYILYENGETFL 277
>gi|355708443|gb|AES03269.1| nucleoporin 88kDa [Mustela putorius furo]
Length = 430
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 61 ASRLYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSAL 120
L+ WD + + +R G L+ + +++ + L FEV + ++ +
Sbjct: 36 GGELFLWDGDGGSFLVVRLRGGGAGEEPSLSQY-QRLLCINPPL-FEVYEVLLSPTQHHI 93
Query: 121 LLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS 175
L+G+ GL V+ L +G+ + T+ C T V + + +SS + +W+P
Sbjct: 94 ALVGTKGLTVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FLTSSPSLTLKHAAWYPSE 152
Query: 176 --DTHLGILSSDSVFRLFNL------ASDVMQPEQEYYLQPVEPGR-YRNAASICPVDFS 226
D H+ +L+SD+V R+++L A ++ E E + GR Y + V F
Sbjct: 153 LLDPHVVLLTSDNVIRVYSLREPQTPARVIVLSEAEEESLILNKGRAYSASLGETAVAFD 212
Query: 227 FGGDHLWDRFSVFVLFSDGSI-----YILC 251
FG R SVF G + YILC
Sbjct: 213 FGPLCAVPR-SVFAQKGKGEVVAHPLYILC 241
>gi|340718560|ref|XP_003397733.1| PREDICTED: nuclear pore complex protein Nup88-like [Bombus
terrestris]
Length = 680
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 28/138 (20%)
Query: 64 LYYWDQNAQCLH--RISVRLGEPDPTSILAAFPSKVMR-ADVKLNFEVSRISINRNGSAL 120
LY W+ C+ +S G+ D P + +R D+ + FE+ + IN G+ L
Sbjct: 43 LYVWNPKEFCVMALNVSTARGKND-------VPYQKLRPTDIPI-FEIKNLLINETGTQL 94
Query: 121 LLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS 175
L G+ GL +M L R + I+C + ++ + IR + WHP S
Sbjct: 95 ALWGNLGLVLMELPKRWGKDAMFQGGKEEILC--------MVYNETISIR--KARWHPGS 144
Query: 176 --DTHLGILSSDSVFRLF 191
D+HL +L+S++ FRL+
Sbjct: 145 TNDSHLLVLTSENTFRLY 162
>gi|390463390|ref|XP_003733025.1| PREDICTED: nuclear pore complex protein Nup88 isoform 2 [Callithrix
jacchus]
Length = 684
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLQLPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|297271701|ref|XP_001100379.2| PREDICTED: nuclear pore complex protein Nup88-like isoform 3
[Macaca mulatta]
Length = 741
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSDN--KTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ ++ T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEDGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|390336122|ref|XP_003724283.1| PREDICTED: nuclear pore complex protein Nup88-like
[Strongylocentrotus purpuratus]
Length = 329
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
F+V I + G +LL G G V+ L R I CR + + +F S
Sbjct: 24 FDVEHIVPSPCGQNVLLYGKRGASVLVLPRRHGKHGLFEGGKAQINCRITPIAER-FFIS 82
Query: 161 SNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNLASDVMQPEQEYYL 206
+ + L+ +W+P +D HL +L+SD+ FRL+++ S ++P Q + L
Sbjct: 83 NTSLSLLKAAWYPGGENDMHLSMLTSDNYFRLYDINSP-LKPVQTHRL 129
>gi|390463392|ref|XP_003733026.1| PREDICTED: nuclear pore complex protein Nup88 isoform 3 [Callithrix
jacchus]
Length = 751
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLQLPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|431893947|gb|ELK03753.1| Nuclear pore complex protein Nup88 [Pteropus alecto]
Length = 739
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVR-LGEPDPTSILAAFPSKVMRADVKLNFEVSRI 111
+NLV G L+ WD+ + +R L L+ + K + FE+ ++
Sbjct: 56 RNLVLGLGGE-LFLWDEQGSSFSVVRLRGLSGTGEEPFLSQY--KTLLCINPPLFEIYQV 112
Query: 112 SINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRT 166
++ + LIG GL V+ L +G+ + T+ C T + + +F+SS +
Sbjct: 113 LLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPIAER-FFTSSTSLTL 171
Query: 167 LQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 172 KHAAWYPSEMLDPHIVLLTSDNVIRIYSL 200
>gi|296202332|ref|XP_002748345.1| PREDICTED: nuclear pore complex protein Nup88 isoform 1 [Callithrix
jacchus]
Length = 741
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLQLPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|291405246|ref|XP_002718886.1| PREDICTED: nucleoporin 88kDa [Oryctolagus cuniculus]
Length = 740
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 108 FEIYQVLLSPTQHHVALIGMKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 166
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 167 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 201
>gi|67967547|dbj|BAE00256.1| unnamed protein product [Macaca fascicularis]
Length = 684
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|340377735|ref|XP_003387384.1| PREDICTED: nuclear pore complex protein Nup88-like [Amphimedon
queenslandica]
Length = 650
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 26 WV-PLQKHPVFSAPDAVRNGGGKFNGAPKN-LVAWDGASRLYYWDQNAQCLHRISVRLGE 83
WV L HP+F F +P + + + L+ WD CL +++
Sbjct: 15 WVTALPDHPLFE----------DFKDSPDSQYLLCETRGDLFVWDPEGYCLRTTNLKKLN 64
Query: 84 PDPTSILAAFPSKVMRADVKLNFEVS------RISINRNGSALLLIGSDGLCVMYL---- 133
D S + P++V + KLN ++ ++ + G + + G + +M L
Sbjct: 65 ADTQSEINEGPTEVYQ---KLNPTITPATHPHSLTPSPTGQHICIAGPQYVYIMELRRSR 121
Query: 134 --YGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDTHLGILSSDSVFRLF 191
+G S +T CRTVSVG I ++ + +QV W D + IL++D + R F
Sbjct: 122 GPHGEFNSGVEETE-CRTVSVGDTII--RAHRLEVIQVEWSQEEDGIIAILTNDEMLRFF 178
Query: 192 NLA 194
+++
Sbjct: 179 SIS 181
>gi|432889689|ref|XP_004075313.1| PREDICTED: nuclear pore complex protein Nup88-like [Oryzias
latipes]
Length = 719
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
F+V ++ ++ + LIG G+ V+ L +G+ + I CRT+ V + +F+S
Sbjct: 89 FQVCQVLLSPTQHHVALIGQRGVSVLELPQRWGKKSQFEGGRDKINCRTIPVAER-FFTS 147
Query: 161 SNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNLAS 195
S + Q +W+P + HL +L+SD+ R ++L S
Sbjct: 148 SASVYLRQAAWYPCETGEPHLVLLTSDNTIRFYSLKS 184
>gi|355568137|gb|EHH24418.1| Nucleoporin Nup88 [Macaca mulatta]
gi|380791679|gb|AFE67715.1| nuclear pore complex protein Nup88, partial [Macaca mulatta]
Length = 741
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|222629515|gb|EEE61647.1| hypothetical protein OsJ_16093 [Oryza sativa Japonica Group]
Length = 191
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 24 VEWVPLQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDG-ASRLYYWDQNAQCLHRISVRLG 82
+WV L HP FS R GG+ G AWD ASRLY WD +A+ +HRI VR+
Sbjct: 96 AQWVALPSHPAFS-----RGDGGEGLGGGGGGAAWDASASRLYVWDPSARGVHRICVRVR 150
Query: 83 EP------DPTSILAAFPSKV 97
+ D ++ AA PS+V
Sbjct: 151 DAEAGKDGDDVAVEAAVPSEV 171
>gi|355753661|gb|EHH57626.1| Nucleoporin Nup88 [Macaca fascicularis]
Length = 741
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|342320628|gb|EGU12567.1| Hypothetical Protein RTG_01100 [Rhodotorula glutinis ATCC 204091]
Length = 1318
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGRT-CSSDNKTIICRTVSVGSQIYFSSSN 162
+NFE+ ++ +N L ++G+ + V+ L R ++ KTI CR + VG+ Y S
Sbjct: 132 INFEIQQLVLNSTSKLLAVVGAHSVVVVVLPRRGWANTVGKTIECRCLPVGA-FYHSLPG 190
Query: 163 VIRTLQVSWHPYS--DTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPV---EPGRY--- 214
WHP + L +L++D R +++++DV +P Q P E G+
Sbjct: 191 SPAIASALWHPLGADSSSLLLLTTDCTLREYSISTDVSEPSQTLSFLPQSEREKGKKRGF 250
Query: 215 ---------RNAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVP 255
R AA +C D G W +++ + +G + LCP +P
Sbjct: 251 GFSAVDEDARTAAGMCVGD----GKGDWGMMTLYAVMKNGDVVALCPFLP 296
>gi|24497453|ref|NP_002523.2| nuclear pore complex protein Nup88 [Homo sapiens]
gi|25008854|sp|Q99567.2|NUP88_HUMAN RecName: Full=Nuclear pore complex protein Nup88; AltName: Full=88
kDa nucleoporin; AltName: Full=Nucleoporin Nup88
gi|12653137|gb|AAH00335.1| Nucleoporin 88kDa [Homo sapiens]
gi|119610746|gb|EAW90340.1| nucleoporin 88kDa, isoform CRA_a [Homo sapiens]
gi|119610748|gb|EAW90342.1| nucleoporin 88kDa, isoform CRA_a [Homo sapiens]
Length = 741
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|332251227|ref|XP_003274749.1| PREDICTED: nuclear pore complex protein Nup88 [Nomascus leucogenys]
Length = 722
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 111 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 169
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 170 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 204
>gi|397477698|ref|XP_003810206.1| PREDICTED: nuclear pore complex protein Nup88 [Pan paniscus]
Length = 741
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|281343319|gb|EFB18903.1| hypothetical protein PANDA_019174 [Ailuropoda melanoleuca]
Length = 696
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L R T+ C T V + +F+S
Sbjct: 64 FEIYQVLLSPTQRHIALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 122
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 123 SPSLTLKHAAWYPSELLDPHIVLLTSDNVIRIYSL 157
>gi|114665938|ref|XP_001165761.1| PREDICTED: nuclear pore complex protein Nup88 isoform 5 [Pan
troglodytes]
gi|410207984|gb|JAA01211.1| nucleoporin 88kDa [Pan troglodytes]
Length = 741
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|410292726|gb|JAA24963.1| nucleoporin 88kDa [Pan troglodytes]
Length = 741
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|410979821|ref|XP_003996279.1| PREDICTED: nuclear pore complex protein Nup88 [Felis catus]
Length = 683
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSDNK--TIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQQHVALIGMKGLTVLELPKRWGKNSEFEGGKLTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 SASLTLKHAAWYPSELLDPHVVLLTSDNVIRIYSL 202
>gi|345317449|ref|XP_001515316.2| PREDICTED: nuclear pore complex protein Nup88-like, partial
[Ornithorhynchus anatinus]
Length = 201
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FEV ++ ++ + LIG+ GL V+ L +G+ + T+ C T + ++ F+S
Sbjct: 41 FEVYQVLLSPTQHHVALIGTKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPIAERL-FTS 99
Query: 161 SNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNL 193
S + +W+P +D H+ +L+SD+ R+++L
Sbjct: 100 STSLTLKHAAWYPGETADPHIVLLTSDNTIRIYSL 134
>gi|1707522|emb|CAA69904.1| 88kDa nuclear pore complex protein [Homo sapiens]
Length = 741
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|410258848|gb|JAA17391.1| nucleoporin 88kDa [Pan troglodytes]
gi|410332317|gb|JAA35105.1| nucleoporin 88kDa [Pan troglodytes]
Length = 741
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|403279748|ref|XP_003931407.1| PREDICTED: nuclear pore complex protein Nup88 [Saimiri boliviensis
boliviensis]
Length = 741
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T + + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPIAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|348543383|ref|XP_003459163.1| PREDICTED: nuclear pore complex protein Nup88-like [Oreochromis
niloticus]
Length = 719
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 443 LLRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDE 502
+L++AT + P+ + I + DPL Q R + H+ G+ SV L ++ + DE
Sbjct: 352 ILKVATGEDEEPQEFDFTCPIKLHRDPLCQHRYHCTHEAGVHSVGLIWVNKLQRFLKSDE 411
Query: 503 TNRSP----------SVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVV 552
++ V +L T TS +P+ GF+ +SD + ++ +TST EC++
Sbjct: 412 EDKDSLQELAAEKRCIVEHILCTRPLLTSQSAPIRGFLIVSDLALGATMICITSTYECIL 471
Query: 553 IEM 555
+ +
Sbjct: 472 LPL 474
>gi|402898435|ref|XP_003912227.1| PREDICTED: nuclear pore complex protein Nup88-like isoform 2 [Papio
anubis]
Length = 382
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|221042490|dbj|BAH12922.1| unnamed protein product [Homo sapiens]
Length = 557
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSL 202
>gi|402898433|ref|XP_003912226.1| PREDICTED: nuclear pore complex protein Nup88-like isoform 1 [Papio
anubis]
Length = 439
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHIVLLTSDNVIRIYSL 202
>gi|395836792|ref|XP_003791332.1| PREDICTED: nuclear pore complex protein Nup88 [Otolemur garnettii]
Length = 701
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T + + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPIAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 202
>gi|410910304|ref|XP_003968630.1| PREDICTED: nuclear pore complex protein Nup88-like [Takifugu
rubripes]
Length = 714
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSDNKT--IICRTVSVGSQIYFSS 160
FEV ++ ++ + + LIG G+ V+ L +G+ + I C+T V + +F+S
Sbjct: 86 FEVHQVLLSPSQLHVALIGQRGVSVLELPQRWGKRSEFEGGKCKINCKTTPVAER-FFTS 144
Query: 161 SNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFNLA-----SDVMQPEQEYYLQPVEPGR 213
S + Q +W+P D HL +L+SD+ R ++L S ++ Q V P
Sbjct: 145 SPSVTLRQATWYPSEAGDPHLVLLTSDNNIRFYSLKSPQTLSKILSLSQSEDDSIVYPQA 204
Query: 214 YRNAASI--CPVDFSFG----GDHLWDR------FSVFVLFSDGSIYI 249
AAS+ V F FG L R + +++L+ +G Y+
Sbjct: 205 RSYAASLGEIAVAFDFGPLSSTRKLSRRSTERPVYPLYILYGNGETYL 252
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 444 LRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVL-------HFLPFTSQ 496
L++AT + P+ + I + +DPL R + H+ G+ SV L +FL +
Sbjct: 348 LKVATGEDEEPQEVDFTCPIKLHVDPLCPHRYHCTHEAGVHSVGLIWVNRLQNFLQSVEE 407
Query: 497 TRGKDE---TNRSPSVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVVI 553
+ + + V ++ T TS P+ GF+ LSD + ++ +TST EC+++
Sbjct: 408 NKDSLQELAAEKQCIVEHIICTRPLPTSRSFPVRGFLILSDLSLGATMICITSTYECMLL 467
Query: 554 EM 555
+
Sbjct: 468 PL 469
>gi|301787329|ref|XP_002929085.1| PREDICTED: nuclear pore complex protein Nup88-like [Ailuropoda
melanoleuca]
Length = 747
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L R T+ C T V + +F+S
Sbjct: 115 FEIYQVLLSPTQRHIALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 173
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 174 SPSLTLKHAAWYPSELLDPHIVLLTSDNVIRIYSL 208
>gi|347840057|emb|CCD54629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 897
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 33/173 (19%)
Query: 111 ISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVS 170
IS N N A+L + + ++ + DN + +T +G + +S + I T
Sbjct: 127 ISPNSNFMAILTTHTVHIAILPEPSHLTAPDNGPMKIKTFHLGPTTHVTSRSGIST--AL 184
Query: 171 WHPY--SDTHLGILSSDSVFRLFNLAS-------------------DVMQPEQEYYLQPV 209
WHP + T L +++D+V R++ L++ D + +Q++ V
Sbjct: 185 WHPLGVNGTCLVTITNDAVVRVWELSTTDRWSFDKPTLVVDLKKLADGVSADQDFGASVV 244
Query: 210 -EPGRYR------NAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVP 255
+P ++ AS C F+ G W ++++ +G IY LCP++P
Sbjct: 245 GQPSKFSPDAFEMEVASAC---FASKGSGGWSPMTLWLAMREGDIYALCPLLP 294
>gi|66357614|ref|XP_625985.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46227237|gb|EAK88187.1| hypothetical protein cgd5_210 [Cryptosporidium parvum Iowa II]
Length = 1085
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 222 PVDFSFG-GDHLWDRFSVFVLFSDGSIYILCPVV 254
PVDF FG G +W+ ++++LF D +I+ +CPV+
Sbjct: 347 PVDFVFGRGPDIWNILTIYILFEDNTIFSICPVI 380
>gi|197102964|ref|NP_001126713.1| nuclear pore complex protein Nup88 [Pongo abelii]
gi|55732428|emb|CAH92915.1| hypothetical protein [Pongo abelii]
Length = 741
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL ++ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD++ R+++L
Sbjct: 168 STSLTLKHAAWYPSEILDPHVVLLTSDNIIRIYSL 202
>gi|66392148|ref|NP_001018302.1| nuclear pore complex protein Nup88 [Danio rerio]
gi|63101111|gb|AAH95815.1| Nucleoporin 88 [Danio rerio]
Length = 720
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 64 LYYWDQNAQCLHRISVRL----GEPDPT---SILAAFPSKVMRADVKLNFEVSRISINRN 116
L+ WD + ++R GEPD + ++L P FEV + ++ +
Sbjct: 49 LFIWDSVESVFYTTNLRQLNSDGEPDTSRYQTLLCINPPL---------FEVCLVLVSPS 99
Query: 117 GSALLLIGSDGLCVMYL---YGRTCSSDNKTII--CRTVSVGSQIYFSSSNVIRTLQVSW 171
+ LIG G V+ L +G+ + I C+T+ V + +F+SS + Q W
Sbjct: 100 QYHVALIGQRGATVLELPQRWGKKSEFEGGRIQINCKTIPVAER-FFTSSASVTLRQAVW 158
Query: 172 HP--YSDTHLGILSSDSVFRLFNL 193
+P + HL +L+SD+ R +NL
Sbjct: 159 YPSETEEPHLVLLTSDNTIRFYNL 182
>gi|354469579|ref|XP_003497205.1| PREDICTED: nuclear pore complex protein Nup88-like [Cricetulus
griseus]
Length = 655
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL + L R T+ C T + + +F+S
Sbjct: 23 FEIHQVLLSPTQHHVALIGMKGLMALELPQRWGKESEFEGGKATVNCSTTPIAER-FFTS 81
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W+P D H+ +L+SD+V R+++L
Sbjct: 82 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSL 116
>gi|154315643|ref|XP_001557144.1| hypothetical protein BC1G_04394 [Botryotinia fuckeliana B05.10]
Length = 897
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 33/173 (19%)
Query: 111 ISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVS 170
IS N N A+L + + ++ + DN + +T +G + +S + I T
Sbjct: 127 ISPNSNFMAILTTHTVHIAILPEPSHLTAPDNGPMKIKTFHLGPTTHVTSRSGIST--AL 184
Query: 171 WHPY--SDTHLGILSSDSVFRLFNLAS-------------------DVMQPEQEYYLQPV 209
WHP + T L ++ D+V R++ L++ D + +Q++ V
Sbjct: 185 WHPLGVNGTCLVTITKDAVVRVWELSTTDRWSFDKPTLVVDLKKLADGVSADQDFGASVV 244
Query: 210 -EPGRYR------NAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVP 255
+P ++ AS C F+ G W ++++ +G IY LCP++P
Sbjct: 245 GQPSKFSPDAFEMEVASAC---FASKGSGGWSPMTLWLAMREGDIYALCPLLP 294
>gi|426383784|ref|XP_004058457.1| PREDICTED: nuclear pore complex protein Nup88 [Gorilla gorilla
gorilla]
Length = 557
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + T+ C T V + +F+S
Sbjct: 109 FEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAER-FFTS 167
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL 193
S + +W P D H+ +L+SD+V R+++L
Sbjct: 168 STSLTLKHAAWFPSEILDPHIVLLTSDNVIRIYSL 202
>gi|449669846|ref|XP_002159149.2| PREDICTED: uncharacterized protein LOC100210775 [Hydra
magnipapillata]
Length = 363
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 64 LYYWDQNAQCLHRISVRLGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLI 123
L YW + +C++ ISV + T+ L +V+R F+VS I + G L+
Sbjct: 40 LLYWSEIQKCIYSISVSKFMQELTNKLGDDEYQVLRTSHSPLFDVSSIKCSITGYHALVY 99
Query: 124 GSDGLCVMYLYGRTCSSDN----KTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYS--DT 177
G G+ ++ L + + N K +I +S+ + Y+ + ++ +Q W+ S D
Sbjct: 100 GEHGIGLIELPRKWGEAGNYEGGKAVIHCKMSLVDESYYVHHSSLKIIQCHWYSGSPNDG 159
Query: 178 HLGILSSDSVFR 189
H+ +L++D+ R
Sbjct: 160 HIVVLTNDNSIR 171
>gi|427779875|gb|JAA55389.1| Putative nuclear pore component [Rhipicephalus pulchellus]
Length = 699
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 67 WDQNAQCLHRISVR----LGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLL 122
W Q+ Q L +S + GEPD L V D L +S ++ LLL
Sbjct: 45 WSQSQQRLFAVSAKAFSSTGEPDDCLELLLSNPPVYDVDNVL------VSCTKH---LLL 95
Query: 123 IGSDGLCVMYL--YGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTLQVSWHPYSDT--H 178
G G+ V+ L T + KT C++ ++G +F I + ++WHP S++ H
Sbjct: 96 SGPHGITVVSLPKTPATLLKERKTS-CKSWTLGEH-FFLCHKSISLVDIAWHPDSESGLH 153
Query: 179 LGILSSDSVFRLFNLASDVMQPEQEYYLQPVE-----PGRYRNAASICPVDFSFGGDHLW 233
+ L+SD+ RL+ D+++P+ + PV G + V F FG
Sbjct: 154 VLALTSDNNLRLY----DIVEPQSAQLVLPVGVNHSLSGTLSASVGDAAVSFDFGDLPAE 209
Query: 234 DRF-SVFVLFSDGSIYI 249
+ VFVL G +Y+
Sbjct: 210 GKARQVFVLGGSGDVYL 226
>gi|209881917|ref|XP_002142396.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558002|gb|EEA08047.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 853
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 157 YFSSSNVIRTLQVSWHPYSDTHLGILSSDSV-----------------FRLFNLASDVMQ 199
Y++ ++ + + W+ D + IL+S+S+ + ++++ V
Sbjct: 166 YYNKNSNFKIVSSEWYAIDDNAIIILTSESINNINYSSSQNIDNYIGRLHILDISNIVDN 225
Query: 200 PEQEYYLQPVEPGRYRNAASICP------VDFSFG-GDHLWDRFSVFVLFSDGSIYILCP 252
+E + G P VDF FG G LW+ S+F+L S+G+I+ +CP
Sbjct: 226 VSEEDNKDIISKGITETRVITIPNSNSEFVDFCFGTGPDLWNMISIFILCSNGTIWYICP 285
Query: 253 VV 254
V+
Sbjct: 286 VI 287
>gi|149724209|ref|XP_001504791.1| PREDICTED: nuclear pore complex protein Nup88 [Equus caballus]
Length = 743
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVR-LGEPDPTSILAAFPSKVMRADVKLNFEVSRI 111
+NLV G L+ WD + + +R L S L+ + +++ + L FE+ ++
Sbjct: 60 RNLVLGLGGE-LFLWDADGSSFLVVRLRGLSGAGEESSLSQY-QRLLCINPPL-FEIYQV 116
Query: 112 SINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSSSNVIRT 166
++ + LIG G+ V+ L +G+ + T+ C T + + +F+SS +
Sbjct: 117 LLSPTQHHVALIGIKGIMVLELPKRWGKNSEFEGGKSTVNCSTTPIAER-FFTSSASLTL 175
Query: 167 LQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 176 KHAAWYPSEMLDPHVVLLTSDNVIRIYSL 204
>gi|359319479|ref|XP_848977.3| PREDICTED: nuclear pore complex protein Nup88 [Canis lupus
familiaris]
Length = 739
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 53 KNLVAWDGASRLYYWDQNAQCLHRISVR-LGEPDPTSILAAFPSKVMRADVKLNFEVSRI 111
+NLV G L+ WD + + +R LG L+ + +++ + L FE+ ++
Sbjct: 56 RNLVLGLGGD-LFLWDGDGSAFLVVRLRGLGGAGDEPSLSQY-QRLLCINPPL-FEIYQV 112
Query: 112 SINRNGSALLLIGSDGLCVMYL---YGRTCSSDNKTII--CRTVSVGSQIYFSSSNVIRT 166
++ + LIG GL V+ L +G+ + + C T + + +F+SS +
Sbjct: 113 LLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKLAVNCSTTPIAER-FFTSSTSLTL 171
Query: 167 LQVSWHPYS--DTHLGILSSDSVFRLFNL 193
+W+P D H+ +L+SD+V R+++L
Sbjct: 172 KHAAWYPSELLDPHVVLLTSDNVIRIYSL 200
>gi|19113207|ref|NP_596415.1| nucleoporin Nup82 [Schizosaccharomyces pombe 972h-]
gi|74624915|sp|Q9P382.1|NUP82_SCHPO RecName: Full=Nucleoporin nup82; AltName: Full=Nuclear pore protein
nup82
gi|9453828|emb|CAB99395.1| nucleoporin Nup82 [Schizosaccharomyces pombe]
Length = 803
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 134/345 (38%), Gaps = 51/345 (14%)
Query: 22 EEVEWVP-LQKHPVFSAPDAVRNGGGKFNGAPKNLVAWDGASRLYYWDQNAQCLHRISVR 80
+EV W L+KHP + F PK+L A++ + + Q + + R
Sbjct: 8 QEVSWTDILEKHPALRWIKPIPEDWEIF---PKHLCAFES----FLYVAVGQEVRSLDCR 60
Query: 81 LGEPDPTSILAAFPSKVMRADVKLNFEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSS 140
L + + F K+ + L+F + +I +++NG L ++G + ++ L R+ S
Sbjct: 61 LLKHKNEASHKNFYKKLFNPE--LDFMIEQICLSKNGRFLAVVGKSKIVILGL--RSKLS 116
Query: 141 DNKTIICRTVSVG---------------------SQIYFSSSNVI----RTLQVSWHPY- 174
+ + + G S++ S VI + + V +HP
Sbjct: 117 EQNPLAESVSNFGESVNNFSNSEHQENGTNSLKLSEVTICSVAVINPSSQIVSVRFHPLG 176
Query: 175 -SDTHLGILSSDSVFRLFNLASDVMQPEQEYYLQPVEPGRYRNAASI---CPVDFSFGG- 229
S L +L+ S+ L+ + V+ P+ E L+ A + P F F
Sbjct: 177 KSGRSLVVLTETSLL-LYEAGNGVLMPDYEIPLKLTHQASNSFDADVDLHIPTAFCFSNV 235
Query: 230 DHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESILEIYNDAQTFGLRSVNSLAVRNSS 289
W F++++L G ++ +CPV+P ++ + + +I + + + N
Sbjct: 236 SQGWGVFTIYILTRGGDVFSVCPVMPANAMIPQDVLKQI----RLILTKKEDDADAENHR 291
Query: 290 LAISWLEATFPEVAQETIDEGDPPALKAHPHALFDSS--VSLQGP 332
+ W+ E A D + LFDSS VS++ P
Sbjct: 292 RNVHWITKLLGEAALAN-DLSTSFVISEGSSELFDSSDYVSVRRP 335
>gi|344290378|ref|XP_003416915.1| PREDICTED: nuclear pore complex protein Nup88 [Loxodonta africana]
Length = 738
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYL---YGRTCSSD--NKTIICRTVSVGSQIYFSS 160
FE+ ++ ++ + LIG GL V+ L +G+ + + C T + + +F+S
Sbjct: 107 FEIYQVLLSPTQHHVALIGLKGLMVLELPKRWGKNSEFEGGKSKVNCSTTPIAER-FFTS 165
Query: 161 SNVIRTLQVSWHPYS--DTHLGILSSDSVFRLFNL------ASDVMQPEQEYYLQPVEPG 212
S + +W+P D H+ +L+SD+V R+++L A ++ E E + G
Sbjct: 166 STSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSLHEPQTPAKVIVLSEAEEESLILNKG 225
Query: 213 R-YRNAASICPVDFSFG----------GDHLWDR---FSVFVLFSDGSIYI 249
R Y + V F FG G D + +++L+ +G ++
Sbjct: 226 RAYTASLGETAVAFDFGPLAAVSKNIFGQKGKDEVVAYPLYILYENGETFL 276
>gi|195112712|ref|XP_002000916.1| GI22267 [Drosophila mojavensis]
gi|193917510|gb|EDW16377.1| GI22267 [Drosophila mojavensis]
Length = 701
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 64 LYYWDQNAQCLH----RISVRLGEPDPTSI--LAAFPSKVMRADVKLNFEVSRISINRNG 117
LY W+ CL R+++ EP I PS + +V R+ ++ G
Sbjct: 39 LYAWNSVDSCLLVTNWRVALLQAEPKRAKISYQTLIPSNAV------GLQVDRVVVSNEG 92
Query: 118 SALLLIGSDGLCVMYLYGRTCSS----DNK-TIICRTVSVGSQIYFSSSNVIRTLQVSWH 172
S + L G + ++ + R+ D K I CR+ ++ + F ++ + QV WH
Sbjct: 93 SLIALSGPQNVTILEVPRRSGPDGYLMDGKPQITCRSYNLDV-LLFQNNPQLEVCQVRWH 151
Query: 173 P--YSDTHLGILSSDSVFRLFNLA 194
P SD+ L +L S++ R++N A
Sbjct: 152 PDSVSDSTLLVLLSNNTMRVYNHA 175
>gi|327287214|ref|XP_003228324.1| PREDICTED: nuclear pore complex protein Nup88-like, partial [Anolis
carolinensis]
Length = 456
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 444 LRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDET 503
LRLA+ + P ++ I + DP R + HD G+ SV L ++ + G DE
Sbjct: 89 LRLASREGDQPLESDFSCPIKLHRDPKCPSRYHCTHDAGVHSVGLPWIHKLHKFLGSDEE 148
Query: 504 NRSPS----------VHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVV 552
++ V +L T PS + GF +SD G + +V +T T EC+
Sbjct: 149 DKDSLQELGAEEKCFVEHILCTKPLPCREPSSILGFAIVSDILGPT-MVCITETYECIT 206
>gi|389642217|ref|XP_003718741.1| eukaryotic translation initiation factor 3 subunit D [Magnaporthe
oryzae 70-15]
gi|223635157|sp|A4RFH6.1|EIF3D_MAGO7 RecName: Full=Eukaryotic translation initiation factor 3 subunit D;
Short=eIF3d
gi|351641294|gb|EHA49157.1| eukaryotic translation initiation factor 3 subunit D [Magnaporthe
oryzae 70-15]
gi|440468070|gb|ELQ37253.1| eukaryotic translation initiation factor 3 subunit D [Magnaporthe
oryzae Y34]
gi|440489030|gb|ELQ68711.1| eukaryotic translation initiation factor 3 subunit D [Magnaporthe
oryzae P131]
Length = 573
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 280 VNSLAVRNSSLAISWL-EATFPEVAQETIDEGDPPALKAHPHALFDSSVSLQGP------ 332
VN + + N S + E F A+ET +PPA KA+ + FD S + +GP
Sbjct: 344 VNQVVIENESQKVDMEHENPFYNAAEET----EPPASKAYKYRKFDLSTNDEGPVYLVVR 399
Query: 333 -----LRKICHGGEDESLAVRG-------AECEGRAVSFLYNLVSKDSIVVTS 373
++K + GED+ L VR A+ G A+ + LVS+ VV +
Sbjct: 400 TELDAVQKNSNNGEDQFLTVRALNEFDNKAQGSGGALDWRSKLVSQRGAVVAT 452
>gi|392578541|gb|EIW71669.1| hypothetical protein TREMEDRAFT_71225 [Tremella mesenterica DSM
1558]
Length = 813
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 108 VSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIRTL 167
+ +I N G L +IG + V+ L SS + C++ ++ + FSS++ +
Sbjct: 97 IHQIVPNPTGRLLAVIGQTQIVVLVLPKGGMSSGE--VHCKSFAI-DEYQFSSTSSSKIS 153
Query: 168 QVSWHPYSD--THLGILSSDSVFRLFNLASDVMQPE---QEYYLQP--VEPGRYR----- 215
+V WH + L IL+SD R + DV QPE Q + P +P R
Sbjct: 154 KVIWHTLGEGGNSLWILTSDGQLREY----DVRQPEDPTQTFSFLPEYSKPSTSRFTAID 209
Query: 216 ----NAASICPVDFSFGGDHLWDRFSVFVLFSDGSIYILCPVVPFGSVYKWESI--LEIY 269
A S C FS + V VL + G IY + PV+PF + + S+ + Y
Sbjct: 210 PFEIYATSFC---FSPAAEEGLYGLMVHVLVASGDIYTMGPVMPFHAEFPIISLRNMRAY 266
Query: 270 NDAQ 273
DA+
Sbjct: 267 TDAR 270
>gi|195450875|ref|XP_002072670.1| GK13562 [Drosophila willistoni]
gi|194168755|gb|EDW83656.1| GK13562 [Drosophila willistoni]
Length = 701
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 104 LNFEVSRISINRNGSALLLIGSDGLCVMYLYGR-----TCSSDNKTIICRTVSVGSQIYF 158
L+ +V R+ + S + L G+C++ L R I CRT ++ Q+ F
Sbjct: 86 LSLDVDRVVASNECSLVALSAPRGVCILDLPRRWGPEGYFDGGKAIITCRTYNLDGQL-F 144
Query: 159 SSSNVIRTLQVSWHP--YSDTHLGILSSDSVFRLFN 192
S+ + Q+ WHP SD+ L IL +++ RL+N
Sbjct: 145 QSNPHLEVRQIRWHPNSVSDSMLLILFNNNTIRLYN 180
>gi|449480029|ref|XP_002192786.2| PREDICTED: nuclear pore complex protein Nup88 [Taeniopygia guttata]
Length = 806
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 444 LRLATVDLALPKNTESGSIITMSIDPLMQERIYIVHDGGIDSVVLHFLPFTSQTRGKDET 503
L+LAT D P ++ I + DP R + H+ G+ SV L ++ + G DE
Sbjct: 439 LKLATGDEEDPLESDFSCPIKLHQDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSDEE 498
Query: 504 NRSP----------SVHPVLNTCQGETSSPSPLCGFVSLSDSFGYSWIVGVTSTQECVV 552
++ V +L T P+P+ GF +SD G + I +T++ EC+
Sbjct: 499 DKDSLQELGAEQKCFVEHILCTKPLPCRQPAPIRGFWIVSDVLGPTMIC-ITNSYECIT 556
>gi|345480127|ref|XP_001606983.2| PREDICTED: nuclear pore complex protein Nup88-like [Nasonia
vitripennis]
Length = 698
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 106 FEVSRISINRNGSALLLIGSDGLCVMYLYGRTCSSDNKTIICRTVSVGSQIYFSSSNVIR 165
FEV+ + IN + L+L GS G+ V+ L R VS S S + +
Sbjct: 79 FEVTNLLINETVTQLVLWGSLGIVVVELPKRWGKEGKFQGGKEVVSCLSHNLDGSCSQLS 138
Query: 166 TLQVS---WHPYS--DTHLGILSSDSVFRLF 191
TL+V WHP S D+HL +L+S ++F+L+
Sbjct: 139 TLEVRKVRWHPGSTTDSHLVVLTSGNIFQLY 169
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,320,209,405
Number of Sequences: 23463169
Number of extensions: 483192571
Number of successful extensions: 1007531
Number of sequences better than 100.0: 185
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 1007165
Number of HSP's gapped (non-prelim): 318
length of query: 691
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 541
effective length of database: 8,839,720,017
effective search space: 4782288529197
effective search space used: 4782288529197
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)