Query 005551
Match_columns 691
No_of_seqs 253 out of 1326
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 17:56:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005551.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2060-2064//hhsearch_pdb/005551hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fp3_A N-acyl-D-glucosamine 2- 1.0 1 1 286.2 21.1 336 130-544 19-392 (402)
2 2gz6_A N-acetyl-D-glucosamine 1.0 1 1 281.7 20.6 257 183-569 13-271 (388)
3 2zbl_A Putative isomerase; N-a 1.0 1 1 266.5 24.9 305 130-575 17-355 (421)
4 3gt5_A N-acetylglucosamine 2-e 1.0 1 1 212.2 23.3 312 183-572 12-346 (402)
5 3ira_A Conserved protein; meth 1.0 1 1 205.9 9.6 113 1-113 57-169 (173)
6 1fp3_A N-acyl-D-glucosamine 2- 1.0 1 1 197.1 25.9 310 181-572 14-350 (402)
7 3gt5_A N-acetylglucosamine 2-e 1.0 1 1 192.4 21.1 342 128-544 13-388 (402)
8 2zbl_A Putative isomerase; N-a 1.0 1 1 191.0 21.6 247 198-570 27-287 (421)
9 2zzr_A Unsaturated glucuronyl 1.0 1 1 190.4 21.0 254 162-572 76-346 (397)
10 2gz6_A N-acetyl-D-glucosamine 1.0 1 1 186.6 24.2 341 128-544 15-382 (388)
No 1
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=1.00 E-value=1 Score=286.25 Aligned_cols=336 Identities=10% Similarity=-0.026 Sum_probs=248.8
Q ss_pred HHHHHHHHH-HCCCCCCCCCCC------CCCCCCHHHHHH----HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999998-403366999899------999998359999----999475201268998768899999999999780897
Q 005551 130 LRLCAEQLS-KSYDSRFGGFGS------APKFPRPVEIQM----MLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGI 198 (691)
Q Consensus 130 ~~~~~~~~~-~~~D~~~GGfg~------apKFP~~~~l~~----ll~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~GGi 198 (691)
++.++.+|. ..+|+++|||++ .|| |.+..+.+ ++.++....... ..+++..+++|.++++.|..++
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~-~~~k~l~~nar~l~~~a~a~~~~~-~~~~~~~l~~A~~~~~fl~~~~- 95 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVY-DDLKYVWLQGRQVWMYCRLYRKLE-RFHRPELLDAAKAGGEFLLRHA- 95 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBS-CCCEEHHHHHHHHHHHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHCCCCCCCCCCEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHC-
T ss_conf 9999987630487789999766888999997-776201425999999999998752-3588899999999999999963-
Q ss_pred CCCCCC-CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC-CCCCCEEEECCCCC
Q ss_conf 225899-2899872899779998316989999999999999704992899999999999987245-88985454025776
Q 005551 199 HDHVGG-GFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI-GPGGEIFSAEDADS 276 (691)
Q Consensus 199 ~D~~~G-GF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~-~~~Ggf~ss~DADs 276 (691)
+|+.+| ||+ |++|.+|.+||++|||||||.++.+|+++|++|+++.|++.|.++++++.+.++ ++.| +|++.+++.
T Consensus 96 ~d~~gg~g~~-~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G-~f~~~~~~~ 173 (402)
T 1fp3_A 96 RVAPPEKKCA-FVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSG-LGRPQLPGA 173 (402)
T ss_dssp BSSTTSCCBC-SEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGG-GCCCCCTTS
T ss_pred CCCCCCCCEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCC
T ss_conf 1868897369-99888998065661449999999999999988598999999999999999986149875-567656676
Q ss_pred CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH---HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCC
Q ss_conf 53357555557722431568999984034999998---824467997678878899886688630002489247898609
Q 005551 277 AETEGATRKKEGAFYVWTSKEVEDILGEHAILFKE---HYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLG 353 (691)
Q Consensus 277 ~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~---~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g 353 (691)
. ..++. . ..-...+.+.+ .+.++.. +
T Consensus 174 ~-------~~~~~----~------~~m~~~~~~l~l~~l~~~~~~----------------------------------~ 202 (402)
T 1fp3_A 174 V-------ASESM----A------VPMMLLCLVEQLGEEDEELAG----------------------------------R 202 (402)
T ss_dssp C-------CEEET----H------HHHHHHHHHHHHHTTCHHHHH----------------------------------H
T ss_pred C-------CCCCC----C------HHHHHHHHHHHHHHHHHHCCC----------------------------------H
T ss_conf 6-------77886----4------689999999999999873381----------------------------------7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCH----HH--------H---HHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9989999999999999986440599997785002411----99--------9---9999999999820222210036777
Q 005551 354 MPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSW----NG--------L---VISSFARASKILKSEAESAMFNFPV 418 (691)
Q Consensus 354 ~~~~~~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~W----Na--------l---~i~aLa~a~~~~~d~~~~~~~~~~~ 418 (691)
..+.+.+.++.++++ ++.|.+|+.+++|.. | |. . ..|.|+++++++++
T Consensus 203 -~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~d----w~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~----------- 265 (402)
T 1fp3_A 203 -YAQLGHWCARRILQH-VQRDGQAVLENVSED----GEELSGCLGRHQNPGHALEAGWFLLRHSSRSGD----------- 265 (402)
T ss_dssp -THHHHHHHHHHHHTT-EETTTTEECSEEETT----SCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred -HHHHHHHHHHHHHHH-HCCCCCEEEEEECCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-----------
T ss_conf -999999999999987-485799688888988----774678887888987388999999999997499-----------
Q ss_pred CCCCHHHHHHHHHHHHHHH-HHHCCCCCCCEEEEE-ECCCCCC-----CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 8999299999999999999-985454699938988-3289878-----88772109999999999999829968999999
Q 005551 419 VGSDRKEYMEVAESAASFI-RRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAI 491 (691)
Q Consensus 419 ~~~~~~~~l~~A~~~~~~l-~~~~~d~~~g~l~~~-~~~g~~~-----~~~~leDyA~~i~all~LY~aTgd~~~L~~A~ 491 (691)
++|++.|+++++++ .++.|+++.|+++++ ..+|.+. ..+.++.++.+|.|++.||++|||++|+++|.
T Consensus 266 -----~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~ 340 (402)
T 1fp3_A 266 -----AKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFY 340 (402)
T ss_dssp -----HHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf -----579999999999978997114789977874058999566576887072899999999999999869999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999998625445886665789998633444568999998839999999999
Q 005551 492 ELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 544 (691)
Q Consensus 492 ~L~~~~~~~f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~Llr 544 (691)
++++.+.++|+|+++|+||++...++.+....|. .-..+|-+++.++..+++
T Consensus 341 ~~~~~~~~~f~D~~~G~w~~~~~~~g~~~~~~k~-~~~k~~yH~~r~~~~~~~ 392 (402)
T 1fp3_A 341 QVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKG-GPFKGCFHVPRCLAMCEE 392 (402)
T ss_dssp HHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSS-CSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCCCHHHHHHHHH
T ss_conf 9999999748389998157667888699877788-888999850999999999
No 2
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=1.00 E-value=1 Score=281.66 Aligned_cols=257 Identities=12% Similarity=0.043 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCE-EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999978089722589928-9987289977999831698999999999999970-49928999999999999872
Q 005551 183 QKMVLFTLQCMAKGGIHDHVGGGF-HRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL-TKDVFYSYICRDILDYLRRD 260 (691)
Q Consensus 183 ~~~~~~tL~~m~~GGi~D~~~GGF-~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~-t~~~~y~~~a~~~~~~l~~~ 260 (691)
++.+...+-......++|| +||| +||++|.. .+|| ||||||||+++++|+.||++ ++++.|+++|+++++||.++
T Consensus 13 ~~~l~~~~l~fw~~~~~D~-~GGf~~~~~~d~~-~~~~-eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~ 89 (388)
T 2gz6_A 13 KNALLNDVLPFWENHSLDS-EGGYFTCLDRQGK-VYDT-DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQH 89 (388)
T ss_dssp HHHHHHTHHHHHHHHCBCT-TSSBCCEEBTTSC-EEEC-CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCC-CCCEEEEECCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999996999877538789-9898767789988-6886-44689999999999999987649988999999999999985
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 45889854540257765335755555772243156899998403499999882446799767887889988668863000
Q 005551 261 MIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLI 340 (691)
Q Consensus 261 l~~~~Ggf~ss~DADs~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~ 340 (691)
|++++||||+++|+|+.+
T Consensus 90 ~~~~~Gg~~~~~d~dg~~-------------------------------------------------------------- 107 (388)
T 2gz6_A 90 GRDDEGNWYFALTRGGEP-------------------------------------------------------------- 107 (388)
T ss_dssp SBCTTSCBCSEECTTSCB--------------------------------------------------------------
T ss_pred CCCCCCCEEEEECCCCCC--------------------------------------------------------------
T ss_conf 588899989997589981--------------------------------------------------------------
Q ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 24892478986099989999999999999986440599997785002411999999999999982022221003677789
Q 005551 341 ELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVG 420 (691)
Q Consensus 341 ~~~~~~~~a~~~g~~~~~~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNal~i~aLa~a~~~~~d~~~~~~~~~~~~~ 420 (691)
++++..+.+||++|.||+.+|+++++
T Consensus 108 -----------------------------------------~~~~~~~~~~af~i~al~~~y~~tg~------------- 133 (388)
T 2gz6_A 108 -----------------------------------------LVQPYNIFSDCFAAMAFSQYALASGE------------- 133 (388)
T ss_dssp -----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred -----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHCC-------------
T ss_conf -----------------------------------------66770109999999999999998698-------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99299999999999999985454699938988328987888772109999999999999829968999999999999986
Q 005551 421 SDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDEL 500 (691)
Q Consensus 421 ~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~leDyA~~i~all~LY~aTgd~~~L~~A~~L~~~~~~~ 500 (691)
++|++.|+++++++.++++++ .|.+.+.+.++. ...+ ++++++++.+++.||++|++++|++.|.++++.+.++
T Consensus 134 ---~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~-~~~~-~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 134 ---EWAKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTR-PMKA-LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGD 207 (388)
T ss_dssp ---HHHHHHHHHHHHHHHTC---------------CC-CCEE-THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCC-CCCC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf ---999999999999999883387-756475457887-8888-7779999999999999749889999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 254458866657899986334445689999988399999999999998589985489999999999999
Q 005551 501 FLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFE 569 (691)
Q Consensus 501 f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~LlrL~~lt~~~~~~~y~~~A~~~l~~~~ 569 (691)
|+++++|++......++..+ .++..|...||+|+.++.+|++++.+|++ +.|++.|++++..+.
T Consensus 208 ~~~~~~g~~~e~~~~~w~~~--~~~~~~~~~pgh~~e~a~lL~~~~~~tgd---~~~~~~A~~~~~~~~ 271 (388)
T 2gz6_A 208 FLDQEQGLMYENVAPDGSHI--DCFEGRLINPGHGIEAMWFIMDIARRKND---SKTINQAVDVVLNIL 271 (388)
T ss_dssp TEETTTTEECSEECTTSCCC--CSTTTTEECHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEECCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHH
T ss_conf 74658996888989998978--88665768888799999999999987598---789999999999999
No 3
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=1.00 E-value=1 Score=266.50 Aligned_cols=305 Identities=13% Similarity=0.026 Sum_probs=229.4
Q ss_pred HHHHHHHHHHCCCCCCCCCCC-------CCCCCCHHHHHHH--HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999998403366999899-------9999983599999--9947520126899876889999999999978089722
Q 005551 130 LRLCAEQLSKSYDSRFGGFGS-------APKFPRPVEIQMM--LYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHD 200 (691)
Q Consensus 130 ~~~~~~~~~~~~D~~~GGfg~-------apKFP~~~~l~~l--l~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~GGi~D 200 (691)
+..+..++...+|+. ||+. .|.++.-..++-+ .-++.... . +++..++++.++++.|..+ ++|
T Consensus 17 ~~~ll~f~~~~~d~~--GF~~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~-~----g~~~~l~~A~~~~~fl~~~-~~D 88 (421)
T 2zbl_A 17 TDRIFNFGKNAVVPT--GFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAS-M----GRPGAYDLVDHGIKAMNGA-LRD 88 (421)
T ss_dssp HHHHHHHHGGGEETT--EECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHH-T----TCTTHHHHHHHHHHHHTTT-TBC
T ss_pred HHHHHHHHHHCCCCC--CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH-C----CCHHHHHHHHHHHHHHHHH-CCC
T ss_conf 999999998584988--8013999989999831669999999999999987-3----9965999999999999995-657
Q ss_pred CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCCEEEECCCCCCCC
Q ss_conf 5899289987289977999831698999999999999970499289999999999998724588-985454025776533
Q 005551 201 HVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGP-GGEIFSAEDADSAET 279 (691)
Q Consensus 201 ~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~~~-~Ggf~ss~DADs~~~ 279 (691)
+.+|||+ ||+|.+|.+|| +|||||||+++.+|++ |++|+++.+++.|+++++++.++|+++ .||||++.|+|+.
T Consensus 89 ~~~GG~~-~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~-- 163 (421)
T 2zbl_A 89 KKYGGWY-ACVNDQGVVDA-SKQGYQHFFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFS-- 163 (421)
T ss_dssp TTTSSBC-SEEETTEEEEC-CEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSC--
T ss_pred CCCCEEE-EEECCCCCCCC-CHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC--
T ss_conf 6789089-88579998177-4309999999999999-99849914899999999999998214778985540267788--
Q ss_pred CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHH
Q ss_conf 57555557722431568999984034999998824467997678878899886688630002489247898609998999
Q 005551 280 EGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKY 359 (691)
Q Consensus 280 ~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~~~ 359 (691)
+.|+.
T Consensus 164 -----~~~~~---------------------------------------------------------------------- 168 (421)
T 2zbl_A 164 -----QTEDY---------------------------------------------------------------------- 168 (421)
T ss_dssp -----SBCSC----------------------------------------------------------------------
T ss_pred -----CCCCC----------------------------------------------------------------------
T ss_conf -----54566----------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999864405999977850024119999--9999999998202222100367778999299999999999999
Q 005551 360 LNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLV--ISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFI 437 (691)
Q Consensus 360 ~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNal~--i~aLa~a~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l 437 (691)
..||+.| +.+|+++++++++ ++|++.|.++++++
T Consensus 169 ----------------------------~~~n~~m~~~~al~~l~~~tgd----------------~~~~~~A~~~~~~~ 204 (421)
T 2zbl_A 169 ----------------------------RGGNANMHAVEAFLIVYDVTHD----------------KKWLDRALRIASVI 204 (421)
T ss_dssp ----------------------------EEHHHHHHHHHHHHHHHHTTCC----------------THHHHHHHHHHHHH
T ss_pred ----------------------------CCCCHHHHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHH
T ss_conf ----------------------------7776799999999999985598----------------99999999999999
Q ss_pred HHHCCCCCCCEEEEEECCCCCCCCCC-CCC-----------HHHH---HHHHHHHHHHC---CC--H-HHHHHHHHHHHH
Q ss_conf 98545469993898832898788877-210-----------9999---99999999982---99--6-899999999999
Q 005551 438 RRHLYDEQTHRLQHSFRNGPSKAPGF-LDD-----------YAFL---ISGLLDLYEFG---SG--T-KWLVWAIELQNT 496 (691)
Q Consensus 438 ~~~~~d~~~g~l~~~~~~g~~~~~~~-leD-----------yA~~---i~all~LY~aT---gd--~-~~L~~A~~L~~~ 496 (691)
..++.++.+|++.+.+.++.....++ ++| |++. ++.|+++|+++ ++ + .|++.|+++++.
T Consensus 205 ~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~ 284 (421)
T 2zbl_A 205 IHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHA 284 (421)
T ss_dssp CCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99841579981543338765650101578866665668999986999999999999872555653568999999999999
Q ss_pred HHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998625445-8866657899986334445689999988399999999999998589985489999999999999999862
Q 005551 497 QDELFLDRE-GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDM 575 (691)
Q Consensus 497 ~~~~f~D~~-~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~LlrL~~lt~~~~~~~y~~~A~~~l~~~~~~l~~~ 575 (691)
+.+.+||++ .||++.+...++.++.+.|.. ..|+.++.++++|+.+|++ +.|.+.++++++.+...+...
T Consensus 285 ~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~------w~~aea~~all~l~~~tgd---~~yl~~a~~~~~~~~~~~~d~ 355 (421)
T 2zbl_A 285 TIRDAWAPDGADGFVYSVDWDGKPIVRERVR------WPIVEAMGTAYALYTLTDD---SQYEEWYQKWWDYCIKYLMDY 355 (421)
T ss_dssp HHHHHBSCSSSSSBCSCBCTTSCBSCCCEEH------HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHTBCT
T ss_pred HHHHHCCCCCCCCEEEEECCCCCCCCCCCCC------HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf 9997558788883798646898936777244------9999999999999988598---999999999999999748789
No 4
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=1.00 E-value=1 Score=212.20 Aligned_cols=312 Identities=15% Similarity=0.023 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999780897225899289987289977-999831698999999999999970499289999999999998724
Q 005551 183 QKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWH-VPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDM 261 (691)
Q Consensus 183 ~~~~~~tL~~m~~GGi~D~~~GGF~RYsvD~~W~-vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l 261 (691)
...+...|.--.. ...| .+|||+.+ .|.+|. +||+|||+++||+++++|+.||++++++.|+++|+++++||.++|
T Consensus 12 ~~~~~~~l~fw~~-~~~D-~~GGf~~~-l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~ 88 (402)
T 3gt5_A 12 RTHISDTMAFYHP-RCID-SAGGFFHY-FRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVH 88 (402)
T ss_dssp HHHHHHHHHHHTT-TTBC-TTSSBCCE-ECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-CCCC-CCCCEEEE-ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 9999979987785-3788-99691148-8999989998730099999999999999975598679999999999999858
Q ss_pred CCCC-CCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 5889-854540257765335755555772243156899998403499999882446799767887889988668863000
Q 005551 262 IGPG-GEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLI 340 (691)
Q Consensus 262 ~~~~-Ggf~ss~DADs~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~ 340 (691)
++++ ||||++. .|..+.+..+.-..=+|.++...+ |..+ |+..
T Consensus 89 ~d~~~Gg~~~~~-~dG~~~~~~~~lyd~Af~i~al~~---------------~~~t--gd~~------------------ 132 (402)
T 3gt5_A 89 RNPATGGYAWTL-CDDRVEDDTNHCYGLAFVMLAYSC---------------GLKV--GIKQ------------------ 132 (402)
T ss_dssp BCTTTSCBCSEE-ETTEEEECCEEHHHHHHHHHHHHH---------------HHHT--TCTT------------------
T ss_pred CCCCCCCEEEEE-ECCCCCCCCCCHHHHHHHHHHHHH---------------HHHH--CCHH------------------
T ss_conf 047899379984-189877677355999999999999---------------9981--9966------------------
Q ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC--C--CCCC--CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 248924789860999899999999999999864405--9--9997--785002411999999999999982022221003
Q 005551 341 ELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSK--R--PRPH--LDDKVIVSWNGLVISSFARASKILKSEAESAMF 414 (691)
Q Consensus 341 ~~~~~~~~a~~~g~~~~~~~~~l~~~~~kL~~~R~~--R--~~P~--~Ddkiit~WNal~i~aLa~a~~~~~d~~~~~~~ 414 (691)
. .+...+.++.+.+.+.+.... + ..|. +...-..+-|+.++.++.++++++++
T Consensus 133 -------~-------l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd------- 191 (402)
T 3gt5_A 133 -------A-------REWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGE------- 191 (402)
T ss_dssp -------H-------HHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCC-------
T ss_pred -------H-------HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-------
T ss_conf -------9-------9999999999999836875797666528888888878778889999999999986198-------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC-CCCCCC-----------CCCCCCHHHHHH---HHHHHHH
Q ss_conf 6777899929999999999999998545469993898832-898788-----------877210999999---9999999
Q 005551 415 NFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR-NGPSKA-----------PGFLDDYAFLIS---GLLDLYE 479 (691)
Q Consensus 415 ~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~-~g~~~~-----------~~~leDyA~~i~---all~LY~ 479 (691)
++|++.|.++++.+..++.++++|.+...+. ++++.. .+..-.+++.|+ .|+++++
T Consensus 192 ---------~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~ 262 (402)
T 3gt5_A 192 ---------QRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDR 262 (402)
T ss_dssp ---------HHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf ---------89999999999999997507568946778999888865445678544567688888749999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 82996899999999999998625445886665789998633444568999998839999999999999858998548999
Q 005551 480 FGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQ 559 (691)
Q Consensus 480 aTgd~~~L~~A~~L~~~~~~~f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~LlrL~~lt~~~~~~~y~~ 559 (691)
+++++.+++.|.++++.+.+.+||++.||++++...+..++.+.|. --.++.++.+++.|+.+|++ +.|.+
T Consensus 263 ~~~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~------~W~qaEal~a~l~ly~~tgd---~~yl~ 333 (402)
T 3gt5_A 263 YIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKY------FWVQAESLAAAALLATRSGD---ERYWQ 333 (402)
T ss_dssp HCCCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEE------HHHHHHHHHHHHHHHHHHCC---HHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCC------EEHHHHHHHHHHHHHHHHCC---HHHHH
T ss_conf 6186889999999999999956268999479988599995447836------63799999999999998697---99999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q 005551 560 NAEHSLAVFETRL 572 (691)
Q Consensus 560 ~A~~~l~~~~~~l 572 (691)
.++++.+.....+
T Consensus 334 ~a~~~~~~~~~~~ 346 (402)
T 3gt5_A 334 WYDRLWAYAWQHM 346 (402)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999758
No 5
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=1.00 E-value=1 Score=205.93 Aligned_cols=113 Identities=42% Similarity=0.840 Sum_probs=109.3
Q ss_pred CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCHH
Q ss_conf 98667999879999733425886328899787899999999962999977568738999610001134899989986199
Q 005551 1 MEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFK 80 (691)
Q Consensus 1 M~~esf~d~~vA~~lN~~Fi~ikVDreerPdid~~Ym~~~q~~~g~gGWPl~vfltpd~~Pf~~gTY~P~~~~~g~~gf~ 80 (691)
|++|+|++++|++.+|++||.||||+||+|||++.||.++|+++|.+|||++||++|||+||+++||||+++++|+++|.
T Consensus 57 m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~ 136 (173)
T 3ira_A 57 MAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGML 136 (173)
T ss_dssp HHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHH
T ss_pred CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHH
T ss_conf 46646699999999980572010677666867799999999974899874645588999851235428998678997899
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999976589999979999999999741
Q 005551 81 TILRKVKDAWDKKRDMLAQSGAFAIEQLSEALS 113 (691)
Q Consensus 81 ~~L~~i~~~w~~~~~~i~~~a~~~~~~l~~~~~ 113 (691)
++|++|.+.|+++|+++.+.+.++.++|++...
T Consensus 137 ~~L~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (173)
T 3ira_A 137 ELVPRIKEIWEQQHEEVLDSAEKITSTIQEMIK 169 (173)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999988899999999999999998630
No 6
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=1.00 E-value=1 Score=197.13 Aligned_cols=310 Identities=13% Similarity=0.023 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHH
Q ss_conf 8999999999997808972258992899872899779998316989999999999999704---9928999999999999
Q 005551 181 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLT---KDVFYSYICRDILDYL 257 (691)
Q Consensus 181 ~~~~~~~~tL~~m~~GGi~D~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t---~~~~y~~~a~~~~~~l 257 (691)
...+.....|..... +++|+++|||++|. |.++.+..++|||++||+++++|+.||+++ +++.|+++|+++++||
T Consensus 14 ~l~~~~~~~l~~w~~-~~~D~~~GGf~~~~-~~dg~~~~~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl 91 (402)
T 1fp3_A 14 RVGQELDRVMAFWLE-HSHDREHGGFFTCL-GRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFL 91 (402)
T ss_dssp HHHHHHHHHHHHHHH-HSBCTTTSSBCCCB-CTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCEEEEE-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999987630-48778999976688-8999997776201425999999999998752358889999999999999
Q ss_pred HHHCCCCCC--CEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH--HHHHHH-------HHCCCCCCCCCCCCC
Q ss_conf 872458898--545402577653357555557722431568999984034--999998-------824467997678878
Q 005551 258 RRDMIGPGG--EIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEH--AILFKE-------HYYLKPTGNCDLSRM 326 (691)
Q Consensus 258 ~~~l~~~~G--gf~ss~DADs~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~--~~~~~~-------~~~i~~~Gn~~~~~~ 326 (691)
.+.|++++| ||++++|+|+.+.+..+.-...+|++|...|+.++.++. .+.+.+ .+...+.|.+.
T Consensus 92 ~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~---- 167 (402)
T 1fp3_A 92 LRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGR---- 167 (402)
T ss_dssp HHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCC----
T ss_pred HHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC----
T ss_conf 9963186889736999888998065661449999999999999988598999999999999999986149875567----
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHH--HHHHHHHH---H
Q ss_conf 899886688630002489247898609998999999999999998644059999778500241199--99999999---9
Q 005551 327 SDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNG--LVISSFAR---A 401 (691)
Q Consensus 327 ~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNa--l~i~aLa~---a 401 (691)
.. .+ +...+.++|+ .++.+++. +
T Consensus 168 --------~~------------------------------------------~~--~~~~~~~~~~~m~~~~~~l~l~~l 195 (402)
T 1fp3_A 168 --------PQ------------------------------------------LP--GAVASESMAVPMMLLCLVEQLGEE 195 (402)
T ss_dssp --------CC------------------------------------------CT--TSCCEEETHHHHHHHHHHHHHHTT
T ss_pred --------CC------------------------------------------CC--CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf --------65------------------------------------------66--766778864689999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE-CCCCCCC--CCCCCCHHHHHH---HHH
Q ss_conf 9982022221003677789992999999999999999854546999389883-2898788--877210999999---999
Q 005551 402 SKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF-RNGPSKA--PGFLDDYAFLIS---GLL 475 (691)
Q Consensus 402 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~-~~g~~~~--~~~leDyA~~i~---all 475 (691)
+.++++ .|++.|.++.+.+.++ +++.++++...+ .++.+.. .+....+++.|+ .|+
T Consensus 196 ~~~~~~-----------------~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~ 257 (402)
T 1fp3_A 196 DEELAG-----------------RYAQLGHWCARRILQH-VQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLL 257 (402)
T ss_dssp CHHHHH-----------------HTHHHHHHHHHHHHTT-EETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHH
T ss_pred HHHCCC-----------------HHHHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 873381-----------------7999999999999987-4857996888889887746788878889873889999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999829968999999999999-98625445886665789998633444568999-998839999999999999858998
Q 005551 476 DLYEFGSGTKWLVWAIELQNTQ-DELFLDREGGGYFNTTGEDPSVLLRVKEDHDG-AEPSGNSVSVINLVRLASIVAGSK 553 (691)
Q Consensus 476 ~LY~aTgd~~~L~~A~~L~~~~-~~~f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~-a~PS~nsv~~~~LlrL~~lt~~~~ 553 (691)
.++++++++.|++.|+++++.+ .++.||++.|+++.+...++.++. ...|. ..--+++.++.+++.|+.+|++
T Consensus 258 ~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~---~l~d~~~~~W~qaea~~a~l~ly~~tgd-- 332 (402)
T 1fp3_A 258 RHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPT---QLEWAMKLWWPHSEAMIAFLMGYSESGD-- 332 (402)
T ss_dssp HHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCS---STTTTCEEHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHHCC--
T ss_conf 99997499579999999999978997114789977874058999566---5768870728999999999999998699--
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 5489999999999999999
Q 005551 554 SDYYRQNAEHSLAVFETRL 572 (691)
Q Consensus 554 ~~~y~~~A~~~l~~~~~~l 572 (691)
+.|.+.|+++.+.+...+
T Consensus 333 -~~yl~~a~~~~~~~~~~f 350 (402)
T 1fp3_A 333 -PALLRLFYQVAEYTFRQF 350 (402)
T ss_dssp -HHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHC
T ss_conf -999999999999999748
No 7
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=1.00 E-value=1 Score=192.40 Aligned_cols=342 Identities=12% Similarity=0.020 Sum_probs=231.4
Q ss_pred HHHHHHHHHHH-HCCCCCCCCCCC--------CCCCCCHHHHH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 89999999998-403366999899--------99999835999--99994752012689987688999999999997808
Q 005551 128 NALRLCAEQLS-KSYDSRFGGFGS--------APKFPRPVEIQ--MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKG 196 (691)
Q Consensus 128 ~~~~~~~~~~~-~~~D~~~GGfg~--------apKFP~~~~l~--~ll~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~G 196 (691)
..++.++.+|. ...| ++|||.+ .|.++....++ ++.-++...... +++..+++|.++++.|..
T Consensus 13 ~~~~~~l~fw~~~~~D-~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~----g~~~~l~~A~~~~~fl~~- 86 (402)
T 3gt5_A 13 THISDTMAFYHPRCID-SAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQF----GTAEYLDAVHHGLSYVRD- 86 (402)
T ss_dssp HHHHHHHHHHTTTTBC-TTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHH-
T ss_conf 9999799877853788-9969114889999899987300999999999999999755----986799999999999998-
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEECCCC
Q ss_conf 972258992899872899779998316989999999999999704992899999999999987245889-8545402577
Q 005551 197 GIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPG-GEIFSAEDAD 275 (691)
Q Consensus 197 Gi~D~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~~~~-Ggf~ss~DAD 275 (691)
.++|...|||++ ++ +++.+....|++||+|.++.++++ |..|+++.+++.|+++++++.+.++++. |+|+.+.+.|
T Consensus 87 ~~~d~~~Gg~~~-~~-~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~ 163 (402)
T 3gt5_A 87 VHRNPATGGYAW-TL-CDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ 163 (402)
T ss_dssp TTBCTTTSCBCS-EE-ETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred HCCCCCCCCEEE-EE-ECCCCCCCCCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
T ss_conf 580478993799-84-189877677355999999999999-998199669999999999999983687579766652888
Q ss_pred CCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCC
Q ss_conf 65335755555772243156899998403499999882446799767887889988668863000248924789860999
Q 005551 276 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 355 (691)
Q Consensus 276 s~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~ 355 (691)
.. . . .+- +..-. . --.+.+.+.+.++.+.. +
T Consensus 164 ~~-~-------~-~~~--~~n~~-m---~l~eall~L~~~tgd~~---------------------------~------- 194 (402)
T 3gt5_A 164 WN-F-------T-RYR--GQNAN-M---HMCEAMLAAYEASGEQR---------------------------Y------- 194 (402)
T ss_dssp CC-B-------C-SCE--EHHHH-H---HHHHHHHHHHHHHCCHH---------------------------H-------
T ss_pred CC-C-------C-CCC--CCCHH-H---HHHHHHHHHHHHHCCHH---------------------------H-------
T ss_conf 88-8-------8-878--77888-9---99999999998619889---------------------------9-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C------------------HHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89999999999999986440599997785--0------------------024119999999999999820222210036
Q 005551 356 LEKYLNILGECRRKLFDVRSKRPRPHLDD--K------------------VIVSWNGLVISSFARASKILKSEAESAMFN 415 (691)
Q Consensus 356 ~~~~~~~l~~~~~kL~~~R~~R~~P~~Dd--k------------------iit~WNal~i~aLa~a~~~~~d~~~~~~~~ 415 (691)
.+...+.++.+..++......+..-+.|. + +.-+-+--..+.|.++++++++
T Consensus 195 ~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~-------- 266 (402)
T 3gt5_A 195 LERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEV-------- 266 (402)
T ss_dssp HHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCC--------
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC--------
T ss_conf 999999999999975075689467789998888654456785445676888887499999999999986186--------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-ECCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 7778999299999999999999985454699938988-328987-88877210999999999999982996899999999
Q 005551 416 FPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIEL 493 (691)
Q Consensus 416 ~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~-~~~~~leDyA~~i~all~LY~aTgd~~~L~~A~~L 493 (691)
+.+++.|++++++..++.||++.|+++.. ..+|.+ ...+.+++++.+|.|++.||+.|||++|++++.++
T Consensus 267 --------~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~ 338 (402)
T 3gt5_A 267 --------EWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRL 338 (402)
T ss_dssp --------TTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf --------889999999999999956268999479988599995447836637999999999999986979999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999998625445886665789998633444568999998839999999999
Q 005551 494 QNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 544 (691)
Q Consensus 494 ~~~~~~~f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~Llr 544 (691)
++.+.++|.|++.|+||+.-..+..++...|- --+.+|-++..|+..+++
T Consensus 339 ~~~~~~~~~D~~~G~W~~~l~~dg~~~~~~k~-~~~K~~YH~~~a~~e~~~ 388 (402)
T 3gt5_A 339 WAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKS-PAGKTDYHTMGACHEVLN 388 (402)
T ss_dssp HHHHHHHTBCTTTCSBCSEECTTSCBCCSCCB-CTTCSSHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC-CCCCCCCCHHHHHHHHHH
T ss_conf 99999758489998078788988899887777-888998547899999999
No 8
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=1.00 E-value=1 Score=190.98 Aligned_cols=247 Identities=10% Similarity=0.050 Sum_probs=185.7
Q ss_pred CCCCCCCCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEECCCC
Q ss_conf 7225899289987289977-9998316989999999999999704992899999999999987245889-8545402577
Q 005551 198 IHDHVGGGFHRYSVDERWH-VPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPG-GEIFSAEDAD 275 (691)
Q Consensus 198 i~D~~~GGF~RYsvD~~W~-vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~~~~-Ggf~ss~DAD 275 (691)
.+|+. ||+ ++|.+|. +|+++||+++||+++++|+.||+ +|++.|+++|+++++||.+.|+++. ||||+++|+|
T Consensus 27 ~~d~~--GF~--~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~d 101 (421)
T 2zbl_A 27 AVVPT--GFG--WLGNKGQIKEEMGTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQ 101 (421)
T ss_dssp GEETT--EEC--CBCTTSCBCGGGCEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETT
T ss_pred CCCCC--CCC--EECCCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 84988--801--3999989999831669999999999999987-399659999999999999956576789089885799
Q ss_pred CCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCC
Q ss_conf 65335755555772243156899998403499999882446799767887889988668863000248924789860999
Q 005551 276 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 355 (691)
Q Consensus 276 s~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~ 355 (691)
..+.
T Consensus 102 g~~~---------------------------------------------------------------------------- 105 (421)
T 2zbl_A 102 GVVD---------------------------------------------------------------------------- 105 (421)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCCC----------------------------------------------------------------------------
T ss_conf 9817----------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89999999999999986440599997785002411999999999999982022221003677789992999999999999
Q 005551 356 LEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAAS 435 (691)
Q Consensus 356 ~~~~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNal~i~aLa~a~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~ 435 (691)
++|. ..-|+++|.+++. ++++++ +.+++.|.++.+
T Consensus 106 ---------------------------~~k~-lyd~Af~i~al~~-~~~tg~----------------~~~l~~a~~~~~ 140 (421)
T 2zbl_A 106 ---------------------------ASKQ-GYQHFFALLGAAS-AVTTGH----------------PEARKLLDYTIE 140 (421)
T ss_dssp ---------------------------CCEE-HHHHHHHHHHHHH-HHTTTC----------------TTHHHHHHHHHH
T ss_pred ---------------------------CCHH-HHHHHHHHHHHHH-HHHHCC----------------CCHHHHHHHHHH
T ss_conf ---------------------------7430-9999999999999-998499----------------148999999999
Q ss_pred HHHHHCCCCCCCEEEEEE-CCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 999854546999389883-28987-8887721099999999999998299689999999999999862544588666578
Q 005551 436 FIRRHLYDEQTHRLQHSF-RNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTT 513 (691)
Q Consensus 436 ~l~~~~~d~~~g~l~~~~-~~g~~-~~~~~leDyA~~i~all~LY~aTgd~~~L~~A~~L~~~~~~~f~D~~~Ggyf~t~ 513 (691)
++.+++++++.|+++.+. .++++ .....+..+++++.+++.+|++|++++|++.|.++++.+..++.+..+|......
T Consensus 141 ~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f 220 (421)
T 2zbl_A 141 VIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHF 220 (421)
T ss_dssp HHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEE
T ss_pred HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC
T ss_conf 99998214778985540267788545667776799999999999985598999999999999999984157998154333
Q ss_pred CCCCCCCCCC-CCC-CC-----CCCCCHHHHHHHHHHHHHHHHCCCCC--H-HHHHHHHHHHHHHHH
Q ss_conf 9998633444-568-99-----99988399999999999998589985--4-899999999999999
Q 005551 514 GEDPSVLLRV-KED-HD-----GAEPSGNSVSVINLVRLASIVAGSKS--D-YYRQNAEHSLAVFET 570 (691)
Q Consensus 514 ~~~~~l~~r~-k~~-~D-----~a~PS~nsv~~~~LlrL~~lt~~~~~--~-~y~~~A~~~l~~~~~ 570 (691)
.++...+... .+. .+ +..|.+.-.+++.|++++.+++...+ + .|.+.|.++......
T Consensus 221 ~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~ 287 (421)
T 2zbl_A 221 DSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIR 287 (421)
T ss_dssp CTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8765650101578866665668999986999999999999872555653568999999999999999
No 9
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=1.00 E-value=1 Score=190.43 Aligned_cols=254 Identities=13% Similarity=0.067 Sum_probs=189.9
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHHHHHC
Q ss_conf 999947520126899876889999999999978089722589928998728997799983169899999999-9999970
Q 005551 162 MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANV-YLDAFSL 240 (691)
Q Consensus 162 ~ll~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~GGi~D~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~-y~~Ay~~ 240 (691)
.|+..+..++ +++.++.+..-.+.+..+ +-.++ ..+.-|-+.+... |..+|++
T Consensus 76 ~lw~~ye~Tg-------d~~~~~~a~~~~~~l~~~-~~~~~------------------~~~~HD~GF~~~~s~~~~y~l 129 (397)
T 2zzr_A 76 CLWLAYEYNQ-------DKKLKNIAHKNVLSFLNR-INNRI------------------ALDHHDLGFLYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHC-------CHHHHHHHHHHHHHHHHH-HHTTC------------------SCCSSTHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHC-------CHHHHHHHHHHHHHHHHH-HHHCC------------------CCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999979-------999999999999999986-43056------------------678777307889999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 49928999999999999872458898545402577653357555557722431568999984034999998824467997
Q 005551 241 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGN 320 (691)
Q Consensus 241 t~~~~y~~~a~~~~~~l~~~l~~~~Ggf~ss~DADs~~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn 320 (691)
||++.|++++.+.+++|..++ +|.+||..+-+.... ++
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~-~~~~g~iqsw~~~~~-----------------------------------------~~ 167 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERY-QEKGGFIQAWGELGY-----------------------------------------KE 167 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTE-ETTTTEECCSSSTTC-----------------------------------------GG
T ss_pred HCCHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCC-----------------------------------------CC
T ss_conf 399999999999999999973-757887985166788-----------------------------------------87
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHH
Q ss_conf 67887889988668863000248924789860999899999999999999864405999977850024119999999999
Q 005551 321 CDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFAR 400 (691)
Q Consensus 321 ~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~~~kL~~~R~~R~~P~~Ddkiit~WNal~i~aLa~ 400 (691)
++ +.+. .|.+.|.+|++
T Consensus 168 -------------~~--------------------------------------------~~iI------D~~mni~~L~~ 184 (397)
T 2zzr_A 168 -------------HY--------------------------------------------RLII------DCLLNIQLLFF 184 (397)
T ss_dssp -------------GC--------------------------------------------EEET------THHHHTHHHHH
T ss_pred -------------CC--------------------------------------------CEEE------CHHHHHHHHHH
T ss_conf -------------77--------------------------------------------4444------16868999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC----CCCCC----CCCCCCCH-----
Q ss_conf 999820222210036777899929999999999999998545469993898832----89878----88772109-----
Q 005551 401 ASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR----NGPSK----APGFLDDY----- 467 (691)
Q Consensus 401 a~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~----~g~~~----~~~~leDy----- 467 (691)
|++++++ ++|++.|+++++++.++++++ +|+++|+++ +|++. .+|+++||
T Consensus 185 A~~~~gd----------------~~y~~~A~~ha~~~l~~~~r~-dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRG 247 (397)
T 2zzr_A 185 AYEQTGD----------------EKYRQVAVNHFYASANNVVRD-DSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARG 247 (397)
T ss_dssp HHHHHCC----------------HHHHHHHHHHHHHHHHHTBCT-TSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHH
T ss_pred HHHHHCC----------------HHHHHHHHHHHHHHHHHCCCC-CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 9998698----------------999999999999999967378-99758998760899975548851654862146888
Q ss_pred -HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf -9999999999998299689999999999999862544588666578999863344456899999883999999999999
Q 005551 468 -AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLA 546 (691)
Q Consensus 468 -A~~i~all~LY~aTgd~~~L~~A~~L~~~~~~~f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~LlrL~ 546 (691)
||+|+|++++|++|+|++||+.|.++++.++++|. ..++.||++..++ ++.++++ ||+||+++.+|++|+
T Consensus 248 qAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~-~d~~pywdt~~~~--~~~~~~D------~Sa~aiaA~~Ll~L~ 318 (397)
T 2zzr_A 248 QAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLP-EDKVSYWDLIFTD--GSGQPRD------TSATATAVCGIHEML 318 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCC-TTSCCBSBTTCCT--TSCCCBC------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCC--CCCCCCC------CCHHHHHHHHHHHHH
T ss_conf 999999999999997989999999999999999658-7588663378877--7799389------889999999999999
Q ss_pred HHHCCCCCHH--HHHHHHHHHHHHHHHH
Q ss_conf 9858998548--9999999999999999
Q 005551 547 SIVAGSKSDY--YRQNAEHSLAVFETRL 572 (691)
Q Consensus 547 ~lt~~~~~~~--y~~~A~~~l~~~~~~l 572 (691)
.++++..... |++.|+++|+.+++..
T Consensus 319 ~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 319 KYLPEVDPDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp TTSCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8608542036899999999999999988
No 10
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=1.00 E-value=1 Score=186.59 Aligned_cols=341 Identities=12% Similarity=0.027 Sum_probs=223.8
Q ss_pred HHHHHHHHHH-HHCCCCCCCCC-CC---CCC-CCCH--HHHH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 8999999999-84033669998-99---999-9983--5999--999947520126899876889999999999978089
Q 005551 128 NALRLCAEQL-SKSYDSRFGGF-GS---APK-FPRP--VEIQ--MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGG 197 (691)
Q Consensus 128 ~~~~~~~~~~-~~~~D~~~GGf-g~---apK-FP~~--~~l~--~ll~~~~~~~~~~~~~~~~~~~~~~~~tL~~m~~GG 197 (691)
.+.+.++.+| ...+|+ .||| .. ..+ .|+. ...+ ++.-++...... .+++..+++|.++++.+.. .
T Consensus 15 ~l~~~~l~fw~~~~~D~-~GGf~~~~~~d~~~~~~eK~l~~nar~i~~~a~a~~~~---~~~~~~~~~A~~~~~~l~~-~ 89 (388)
T 2gz6_A 15 ALLNDVLPFWENHSLDS-EGGYFTCLDRQGKVYDTDKFIWLQNRQVWTFSMLCNQL---EKRENWLKIARNGAKFLAQ-H 89 (388)
T ss_dssp HHHHTHHHHHHHHCBCT-TSSBCCEEBTTSCEEECCEEHHHHHHHHHHHHHHHHHT---CCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHCCCCC-CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHH-H
T ss_conf 99996999877538789-98987677899886886446899999999999999876---4998899999999999998-5
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 72258992899872899779998316989999999999999704992899999999999987245889854540257765
Q 005551 198 IHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSA 277 (691)
Q Consensus 198 i~D~~~GGF~RYsvD~~W~vPhfEKmLydnA~ll~~y~~Ay~~t~~~~y~~~a~~~~~~l~~~l~~~~Ggf~ss~DADs~ 277 (691)
++|. .|||+. ++|.+..+..-.|.+|+||.++.+++++|++|+++.|++.|+++++++.+.+.++. |++.....+..
T Consensus 90 ~~~~-~Gg~~~-~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~-g~~~~~~~~~~ 166 (388)
T 2gz6_A 90 GRDD-EGNWYF-ALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPK-GKYTKTYPGTR 166 (388)
T ss_dssp SBCT-TSCBCS-EECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC---------------CC
T ss_pred CCCC-CCCEEE-EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCC
T ss_conf 5888-999899-97589981667701099999999999999986989999999999999998833877-56475457887
Q ss_pred CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHH
Q ss_conf 33575555577224315689999840349999988244679976788788998866886300024892478986099989
Q 005551 278 ETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLE 357 (691)
Q Consensus 278 ~~~~~~~~~EG~yY~wt~~Ei~~~l~~~~~~~~~~~~i~~~Gn~~~~~~~d~~~~~~g~nvL~~~~~~~~~a~~~g~~~~ 357 (691)
...| .+- -.. -...+.+.|.++.+ ..+ .+
T Consensus 167 -------~~~~------~~~-~~~---~~~all~l~~~t~d---------------------------~~~-------~~ 195 (388)
T 2gz6_A 167 -------PMKA------LAV-PMI---LANLTLEMEWLLPQ---------------------------ETL-------EN 195 (388)
T ss_dssp -------CCEE------THH-HHH---HHHHHHHTGGGSCH---------------------------HHH-------HH
T ss_pred -------CCCC------CCH-HHH---HHHHHHHHHHHCCC---------------------------HHH-------HH
T ss_conf -------8888------777-999---99999999997498---------------------------899-------99
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCC-----------CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 999999999999986440599997-----------785002411999999999999982022221003677789992999
Q 005551 358 KYLNILGECRRKLFDVRSKRPRPH-----------LDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEY 426 (691)
Q Consensus 358 ~~~~~l~~~~~kL~~~R~~R~~P~-----------~Ddkiit~WNal~i~aLa~a~~~~~d~~~~~~~~~~~~~~~~~~~ 426 (691)
...+.++.+.+++.+....+..++ .++.+.-+-|.-+++.|.++++++++ ++|
T Consensus 196 ~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd----------------~~~ 259 (388)
T 2gz6_A 196 VLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKND----------------SKT 259 (388)
T ss_dssp HHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTC----------------HHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----------------HHH
T ss_conf 9999999999987465899688898999897888665768888799999999999987598----------------789
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEE-ECCCCCC-----CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999985454699938988-3289878-----88772109999999999999829968999999999999986
Q 005551 427 MEVAESAASFIRRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDEL 500 (691)
Q Consensus 427 l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~~-----~~~~leDyA~~i~all~LY~aTgd~~~L~~A~~L~~~~~~~ 500 (691)
++.|+++++++.++.|+++.|++++. ..+|.+. ..+.++.+|.++.|++.+|+.||+++|+++|.++++.+.++
T Consensus 260 ~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~ 339 (388)
T 2gz6_A 260 INQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQH 339 (388)
T ss_dssp HHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999997146889987886358988266675777171899999999999998869799999999999999974
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 25445886665789998633444568999998839999999999
Q 005551 501 FLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 544 (691)
Q Consensus 501 f~D~~~Ggyf~t~~~~~~l~~r~k~~~D~a~PS~nsv~~~~Llr 544 (691)
|.|+++|++|+....++.+....| ..-...|-++..++.-+++
T Consensus 340 ~~D~~~G~w~~~l~~~g~~~~~~~-~~~~K~~YH~~~~~~~~~~ 382 (388)
T 2gz6_A 340 FADPEYGEWFGYLNRRGEVLLNLK-GGKWKGCFHVPRAMYLCWQ 382 (388)
T ss_dssp HBCTTTSSBCCEECTTSCBSSCBS-CCSSCSSSHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCCHHHHHHHHHH
T ss_conf 927999826775488869997678-8888898646999999999
Done!