Your job contains 1 sequence.
>005552
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFEN
VTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSAT
LCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYF
DPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLI
IYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVD
CLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLIS
NDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAEC
LCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNC
GQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINY
FRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFV
AFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIA
IKQYAPFLDANLYPMLSYSSIILLLSPDENA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005552
(691 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061216 - symbol:ISA1 "isoamylase 1" species:3... 1849 5.7e-277 2
TAIR|locus:2122343 - symbol:ISA3 "isoamylase 3" species:3... 811 1.6e-115 2
UNIPROTKB|Q8EGU6 - symbol:glgX "Glycogen isoamylase GlgX"... 483 2.2e-83 4
TIGR_CMR|SO_1495 - symbol:SO_1495 "glycogen operon protei... 483 2.2e-83 4
UNIPROTKB|P15067 - symbol:glgX species:83333 "Escherichia... 430 2.3e-76 3
UNIPROTKB|Q9KKS1 - symbol:VC_A1029 "Glycogen operon prote... 487 5.1e-68 3
TIGR_CMR|VC_A1029 - symbol:VC_A1029 "glycogen operon prot... 487 5.1e-68 3
TAIR|locus:2014500 - symbol:DBE1 "debranching enzyme 1" s... 351 7.2e-60 3
UNIPROTKB|Q81KP1 - symbol:BAS4597 "Putative pullulanase" ... 123 9.3e-17 3
TIGR_CMR|BA_4953 - symbol:BA_4953 "pullulanase, putative"... 123 9.3e-17 3
TIGR_CMR|BA_2728 - symbol:BA_2728 "pullulanase, putative"... 111 3.8e-13 3
TIGR_CMR|CPS_1694 - symbol:CPS_1694 "putative pullulanase... 86 0.00026 5
>TAIR|locus:2061216 [details] [associations]
symbol:ISA1 "isoamylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0010021 "amylopectin biosynthetic
process" evidence=IMP] [GO:0010368 "chloroplast isoamylase complex"
evidence=IDA] [GO:0019156 "isoamylase activity" evidence=IDA;IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
EMBL:AF002109 UniGene:At.20831 UniGene:At.71018 GO:GO:0010021
GO:GO:0019252 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
EMBL:BT000443 EMBL:BT010348 IPI:IPI00520721 PIR:B84823
RefSeq:NP_181522.1 HSSP:P10342 ProteinModelPortal:O04196 SMR:O04196
IntAct:O04196 STRING:O04196 PaxDb:O04196 PRIDE:O04196 ProMEX:O04196
EnsemblPlants:AT2G39930.1 GeneID:818580 KEGG:ath:AT2G39930
TAIR:At2g39930 InParanoid:O04196 OMA:HAFVNDQ PhylomeDB:O04196
ProtClustDB:CLSN2683381 BRENDA:3.2.1.68 Genevestigator:O04196
GO:GO:0010368 GO:GO:0019156 Uniprot:O04196
Length = 783
Score = 1849 (655.9 bits), Expect = 5.7e-277, Sum P(2) = 5.7e-277
Identities = 322/398 (80%), Positives = 361/398 (90%)
Query: 274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
KGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWVTEMHVDGFRFDL SIM+R SSLWD+ N
Sbjct: 367 KGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAAN 426
Query: 334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWS 393
VYG +EGDLLTTGTP+ PP+ID+ISNDPILRGVKLIAEAWD GGLYQVG+FPHWGIWS
Sbjct: 427 VYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWS 486
Query: 394 EWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADL 453
EWNGK+RD+VRQFIKGTDGF+GAFAECLCGSPNLYQGG RKPW+SINF+CAHDGF+LADL
Sbjct: 487 EWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGG-RKPWHSINFICAHDGFTLADL 545
Query: 454 VSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVP 513
V+YN K+NLANGE+NNDGE HN SWNCG+EG+FA+I VK+LR+RQMRNFF+ LMVSQGVP
Sbjct: 546 VTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVP 605
Query: 514 MISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLS 573
MI MGDEYGHTKGGNNNTYCHDN +NYFRWDKKEE+ SDFFRFC +L KFR ECESLGL+
Sbjct: 606 MIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLN 665
Query: 574 DFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGY 633
DFPTA RLQWHG AP +P+WS+ SRFVAF+L+DSVK EIYVAFN SHL ++SLP RPGY
Sbjct: 666 DFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGY 725
Query: 634 RWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDAN 671
RWEP VDTSKP P+D ++ DLP +E A+KQY FLDAN
Sbjct: 726 RWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDAN 763
Score = 837 (299.7 bits), Expect = 5.7e-277, Sum P(2) = 5.7e-277
Identities = 155/233 (66%), Positives = 188/233 (80%)
Query: 44 NHPNKTSHFANSKA-FENVTKNLVIRASKSAELETAVIKKP-QSQRFQVSKGYPTPFGAT 101
NH N K F ++ + R S AE AV++KP +S RF +S G P+PFG T
Sbjct: 22 NHTFPKISAPNFKPLFRPISISAKDRRSNEAE-NIAVVEKPLKSDRFFISDGLPSPFGPT 80
Query: 102 LRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKD 161
+RD GVNFS++S+N+VSAT+CLI+LSDL++NKVTEEI LD N+TG VWHVFL+GDFKD
Sbjct: 81 VRDDGVNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKD 140
Query: 162 MLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPE 221
MLYGY+FDGKFSP+EGHY+D + I+LDPYAKA+ISR +FGVLGPD+NCWPQMAC+VPT E
Sbjct: 141 MLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTRE 200
Query: 222 DEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLK 274
+EFDWEGD+ LK PQ+DL+IYE+HVRGFTRHESSK E PGTY GV EKLDHLK
Sbjct: 201 EEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKIEFPGTYQGVAEKLDHLK 253
Score = 38 (18.4 bits), Expect = 1.9e-192, Sum P(2) = 1.9e-192
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 157 GDFKDMLYGYKFDGKFSP 174
GD + +GY G FSP
Sbjct: 281 GDHRVNFWGYSTIGFFSP 298
>TAIR|locus:2122343 [details] [associations]
symbol:ISA3 "isoamylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009569 "chloroplast starch grain" evidence=IDA]
[GO:0005983 "starch catabolic process" evidence=IMP] [GO:0019156
"isoamylase activity" evidence=IDA] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
UniPathway:UPA00153 InterPro:IPR013780 GO:GO:0009570
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 GO:GO:0005983 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AL161513 eggNOG:COG1523 HOGENOM:HOG000239197
KO:K02438 HSSP:P10342 GO:GO:0019156 EMBL:AY091058 EMBL:AY133739
EMBL:AK227049 IPI:IPI00519580 PIR:B85091 RefSeq:NP_192641.2
UniGene:At.33717 ProteinModelPortal:Q9M0S5 SMR:Q9M0S5 STRING:Q9M0S5
PaxDb:Q9M0S5 PRIDE:Q9M0S5 EnsemblPlants:AT4G09020.1 GeneID:826481
KEGG:ath:AT4G09020 TAIR:At4g09020 InParanoid:Q8RWW6 OMA:VPTVWPG
PhylomeDB:Q9M0S5 ProtClustDB:CLSN2915032
BioCyc:ARA:AT4G09020-MONOMER BioCyc:MetaCyc:AT4G09020-MONOMER
Genevestigator:Q9M0S5 GO:GO:0009569 Uniprot:Q9M0S5
Length = 764
Score = 811 (290.5 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 159/309 (51%), Positives = 203/309 (65%)
Query: 345 TTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVR 404
T G+PL +PPLI I+ D +L K+IAE WD GGLY VG FP+W W+EWNG YRD VR
Sbjct: 437 TDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYLVGKFPNWDRWAEWNGMYRDDVR 496
Query: 405 QFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLAN 464
+FIKG G G+FA + GS +LYQ RKP++ +NFV AHDGF+L DLVSYN KHN AN
Sbjct: 497 RFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFVIAHDGFTLRDLVSYNFKHNEAN 556
Query: 465 GEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHT 524
GE NDG N+SWNCG EGE + +K LR RQM+NF L LM+SQG PM+ MGDEYGHT
Sbjct: 557 GEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHT 616
Query: 525 KGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWH 584
+ GNNN+Y HD +N F+W + + K + FRF + KFRH L +F T + WH
Sbjct: 617 RYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFSEVIKFRHSHHVLKHENFLTQGEITWH 676
Query: 585 GHAPGLPDWSD-KSRFVAFTLIDSVKG-EIYVAFNASHLPVIISLPKRP-GYRWEPLVDT 641
+W + +S+F+AFTL D + G +IYVAFNA V +P+ P G +W + DT
Sbjct: 677 ED-----NWDNSESKFLAFTLHDGIGGRDIYVAFNAHDYFVKALIPQPPPGKQWFRVADT 731
Query: 642 SKPEPFDFL 650
+ P DF+
Sbjct: 732 NLESPDDFV 740
Score = 348 (127.6 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 81/227 (35%), Positives = 121/227 (53%)
Query: 56 KAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSN 115
K + T + R + +E +++ F+VS G +P G + D G+NF++FS N
Sbjct: 51 KIKDRSTLKVTCRRAHERVVEEEASTMTETKLFKVSSGEVSPLGVSQVDKGINFALFSQN 110
Query: 116 AVSATLCLITLSDLQENKVTE----EIALDSFANKTGDVWHVFLKG-DFKDMLYGYKFDG 170
A S TLCL +LS ++ + E+ LD NKTGD WH+ ++ ++LYGY+ DG
Sbjct: 111 ATSVTLCL-SLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDG 169
Query: 171 KFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDL 230
Q+GH FD + ++LDPYAK V + FG + Q FDW D
Sbjct: 170 PGEWQQGHRFDRSILLLDPYAKLVKGHSSFG---DSSQKFAQFYGTYDFESSPFDWGDDY 226
Query: 231 PL-KYPQRDLIIYEVHVRGFTRHESSKTEHP--GTYLGVVEKLDHLK 274
P++DL+IYE++VR FT ESS + G+YLG +EK+ HL+
Sbjct: 227 KFPNIPEKDLVIYEMNVRAFTADESSGMDPAIGGSYLGFIEKIPHLQ 273
Score = 216 (81.1 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 41/90 (45%), Positives = 58/90 (64%)
Query: 240 IIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHL---KGEFYNYSGCGNTFNCNHPVVRQ 296
+I +V V T K + ++ G+ K+ ++ + N+SGCGNT NCNHPVV +
Sbjct: 349 VILDV-VYNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVME 407
Query: 297 FIVDCLRYWVTEMHVDGFRFDLASIMTRGS 326
I+D LR+WVTE HVDGFRFDLAS++ R +
Sbjct: 408 LILDSLRHWVTEYHVDGFRFDLASVLCRAT 437
>UNIPROTKB|Q8EGU6 [details] [associations]
symbol:glgX "Glycogen isoamylase GlgX" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 483 (175.1 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 97/195 (49%), Positives = 124/195 (63%)
Query: 357 DLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAG 415
D + DP+L VKLIAE WD G G YQ+G FP +SEWN +YRD +R+F +G G
Sbjct: 388 DALLQDPVLCRVKLIAEPWDIGPGGYQLGNFPV--AFSEWNDRYRDTMRRFWRGDHGMLP 445
Query: 416 AFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHN 475
FA GS + ++ GR P SINF+ +HDGF+L DLVSY ++HN ANGE+N DG N
Sbjct: 446 EFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTLKDLVSYCERHNWANGEENRDGHHAN 505
Query: 476 NSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHD 535
S++ G EG ++ V LR RQ RN L +SQGVPM+ GDE G T+GGNNN YC D
Sbjct: 506 FSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQGVPMLLSGDETGRTQGGNNNAYCQD 565
Query: 536 NDINYFRWDKKEESK 550
N +N+F W + K
Sbjct: 566 NPMNWFDWSSEGMDK 580
Score = 234 (87.4 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 49/120 (40%), Positives = 70/120 (58%)
Query: 78 AVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEE 137
A+I S + VS G P GAT+ DGGVNF++FS++A LCL D Q +
Sbjct: 5 ALINSGGSLPYSVSAGKAFPLGATVDDGGVNFALFSAHATGVELCLF---DAQGKVEIQR 61
Query: 138 IALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISR 197
IAL +T +WH+++ G LYGY+ G + PQ GH F+P K++LDPYA+ ++ R
Sbjct: 62 IAL---TEQTQQIWHLYVHGLCAGQLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGR 118
Score = 158 (60.7 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 277 FY-NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
FY N +GCGNT N NHP + Q ++D LRYWV M VDGFRFDLA+ + R
Sbjct: 327 FYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRFDLAASLGR 375
Score = 68 (29.0 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 235 PQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVEK--LDHL 273
P IIYE+H++GFT H GT+ G+ K +D+L
Sbjct: 179 PIEQCIIYEMHLKGFTALHPEIDVPLRGTFAGLASKAAIDYL 220
>TIGR_CMR|SO_1495 [details] [associations]
symbol:SO_1495 "glycogen operon protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 483 (175.1 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 97/195 (49%), Positives = 124/195 (63%)
Query: 357 DLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAG 415
D + DP+L VKLIAE WD G G YQ+G FP +SEWN +YRD +R+F +G G
Sbjct: 388 DALLQDPVLCRVKLIAEPWDIGPGGYQLGNFPV--AFSEWNDRYRDTMRRFWRGDHGMLP 445
Query: 416 AFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHN 475
FA GS + ++ GR P SINF+ +HDGF+L DLVSY ++HN ANGE+N DG N
Sbjct: 446 EFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTLKDLVSYCERHNWANGEENRDGHHAN 505
Query: 476 NSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHD 535
S++ G EG ++ V LR RQ RN L +SQGVPM+ GDE G T+GGNNN YC D
Sbjct: 506 FSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQGVPMLLSGDETGRTQGGNNNAYCQD 565
Query: 536 NDINYFRWDKKEESK 550
N +N+F W + K
Sbjct: 566 NPMNWFDWSSEGMDK 580
Score = 234 (87.4 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 49/120 (40%), Positives = 70/120 (58%)
Query: 78 AVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEE 137
A+I S + VS G P GAT+ DGGVNF++FS++A LCL D Q +
Sbjct: 5 ALINSGGSLPYSVSAGKAFPLGATVDDGGVNFALFSAHATGVELCLF---DAQGKVEIQR 61
Query: 138 IALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISR 197
IAL +T +WH+++ G LYGY+ G + PQ GH F+P K++LDPYA+ ++ R
Sbjct: 62 IAL---TEQTQQIWHLYVHGLCAGQLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGR 118
Score = 158 (60.7 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 277 FY-NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
FY N +GCGNT N NHP + Q ++D LRYWV M VDGFRFDLA+ + R
Sbjct: 327 FYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRFDLAASLGR 375
Score = 68 (29.0 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 235 PQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVEK--LDHL 273
P IIYE+H++GFT H GT+ G+ K +D+L
Sbjct: 179 PIEQCIIYEMHLKGFTALHPEIDVPLRGTFAGLASKAAIDYL 220
>UNIPROTKB|P15067 [details] [associations]
symbol:glgX species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0043169 "cation binding" evidence=IEA] [GO:0005980 "glycogen
catabolic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004135 "amylo-alpha-1,6-glucosidase activity"
evidence=IDA] [GO:0004133 "glycogen debranching enzyme activity"
evidence=IMP] HAMAP:MF_01248 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
InterPro:IPR022844 Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00165
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
PANTHER:PTHR10357 EMBL:U18997 CAZy:CBM48 GO:GO:0006974
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 GO:GO:0004135
EMBL:J01616 PIR:B65139 RefSeq:NP_417889.1 RefSeq:YP_492002.1
PDB:2WSK PDBsum:2WSK ProteinModelPortal:P15067 SMR:P15067
IntAct:P15067 EnsemblBacteria:EBESCT00000000066
EnsemblBacteria:EBESCT00000017349 GeneID:12934523 GeneID:947941
KEGG:ecj:Y75_p3746 KEGG:eco:b3431 PATRIC:32122302 EchoBASE:EB0376
EcoGene:EG10381 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
OMA:HPVMIAY ProtClustDB:PRK03705 BioCyc:EcoCyc:EG10381-MONOMER
BioCyc:ECOL316407:JW3394-MONOMER BioCyc:MetaCyc:EG10381-MONOMER
EvolutionaryTrace:P15067 Genevestigator:P15067
PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 Uniprot:P15067
Length = 657
Score = 430 (156.4 bits), Expect = 2.3e-76, Sum P(3) = 2.3e-76
Identities = 116/337 (34%), Positives = 167/337 (49%)
Query: 317 DLASIMTRGSSLW-DSVNVYGIPIEGDLLTTGTP--LRSPPLIDLISNDPILRGVKLIAE 373
D AS R W ++ +V G + + TP + PL I N P+L VKLIAE
Sbjct: 315 DYASACLR---YWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAE 371
Query: 374 AWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGG 432
WD G YQVG FP +++EWN +RD R+F D GAFA S ++++ G
Sbjct: 372 PWDIAPGGYQVGNFPP--LFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNG 429
Query: 433 RKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVK 492
R P +IN V AHDGF+L D V +N KHN ANGE+N DG +N S N G+EG ++ +
Sbjct: 430 RLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLV 489
Query: 493 KLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSD 552
+ RR + L++SQG PM+ GDE+GH++ GNNN YC DN + + W ++ S
Sbjct: 490 ERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWS---QASSG 546
Query: 553 FFRFCCLLTKFRHECESLGLSDF-PTAD-RLQW-HGHAPGLP--DWSDKSRFVAFTLIDS 607
F L R +L + + D ++W + +A L +W + + + L D
Sbjct: 547 LTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSD- 605
Query: 608 VKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKP 644
+A NA+ I LP + P P
Sbjct: 606 ---RFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNP 639
Score = 258 (95.9 bits), Expect = 2.3e-76, Sum P(3) = 2.3e-76
Identities = 65/195 (33%), Positives = 97/195 (49%)
Query: 89 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTG 148
Q++ G P P GA GVNF++FS++A LC+ + QE++ +G
Sbjct: 3 QLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSG 54
Query: 149 DVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVL---GP 205
D+WH +L + YGY+ G + P EGH F+P K+++DP A+ + + L G
Sbjct: 55 DIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGH 114
Query: 206 DENCWPQMACLVP---TPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPG 261
+E + A + P D +DWE D P + P IIYE HV+G T H E G
Sbjct: 115 NEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRG 174
Query: 262 TY--LGVVEKLDHLK 274
TY LG +++LK
Sbjct: 175 TYKALGHPVMINYLK 189
Score = 178 (67.7 bits), Expect = 2.3e-76, Sum P(3) = 2.3e-76
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 275 GEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
G+++N++GCGNT N +HP V + CLRYWV HVDGFRFDLA++M R
Sbjct: 294 GDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGR 343
>UNIPROTKB|Q9KKS1 [details] [associations]
symbol:VC_A1029 "Glycogen operon protein GlgX"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005977 "glycogen
metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR011837 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 487 (176.5 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 115/293 (39%), Positives = 153/293 (52%)
Query: 359 ISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAF 417
++ DP+LR VKLIAE WD G YQVG FP +G W+E N K RDI R F +G GF F
Sbjct: 336 VAQDPVLREVKLIAEPWDIGPNGYQVGNFP-FG-WNETNDKLRDITRSFWRGDLGFLKEF 393
Query: 418 AECLCGSPNLYQGGGRKPWN-SINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNN 476
A L GS +LY P+ ++N++ HDGF+L DLVSY KHN ANGE N DG N
Sbjct: 394 ATRLMGSRDLYSAANW-PYKLTVNYITYHDGFTLQDLVSYKHKHNEANGEQNRDGHGDNR 452
Query: 477 SWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDN 536
S N G EG+ +I+++ R RQ RNF L+ + G+P I D HT+ GNNN YC DN
Sbjct: 453 SDNYGFEGDTDSIVIRATRERQKRNFMASLLFAFGIPHILTADVLSHTQKGNNNAYCQDN 512
Query: 537 DINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFP----TADRLQWH---GHAPG 589
DI++ W+ E +K DF + + R + F +R+ W G
Sbjct: 513 DISWLNWENNE-TKQDFREWLAGMVAARQTYMVPFIRAFSGENRNNNRIAWRRVDGKPME 571
Query: 590 LPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTS 642
+ DW+ S I S E+ N ++ P LPK W + DT+
Sbjct: 572 MDDWNRLSSVALHIGIGSDGPEMLYLINQTNAPARFVLPKDRQQDWRLICDTN 624
Score = 140 (54.3 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 275 GEFY-NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
G+ Y NY+GCGNT + ++ ++D LR WVTE +DGFRFDLA+ + R
Sbjct: 271 GDHYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLAATLGR 321
Score = 94 (38.1 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 32/133 (24%), Positives = 56/133 (42%)
Query: 150 VWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENC 209
V H + G YGY E HY + DPYA+A+ +
Sbjct: 55 VKHTHISGIHAGQKYGYLIQLN---DELHY------ISDPYARALEGPLHYAPPFDSHKS 105
Query: 210 WPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVE 268
+ C+V + FDW+ + + +++++E HV+G T+ + + G YLG+V
Sbjct: 106 FDLPKCVVT--DTHFDWQNVAKPRIARDEMVLFETHVKGLTQLNPDVEKALRGKYLGLVS 163
Query: 269 K--LDHLKGEFYN 279
+ LD + + N
Sbjct: 164 QPMLDFYRQQNIN 176
Score = 55 (24.4 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 32/110 (29%), Positives = 38/110 (34%)
Query: 95 PTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVF 154
P P GATL G NF+I++ L L E E +A V H
Sbjct: 8 PFPLGATLDAEGCNFAIYAPANRDILLALFHADGSYETHQLEH----EYAG----VKHTH 59
Query: 155 LKGDFKDMLYGYKFDGKFSPQEGHYF-DPTKIVLD-P--YAKAVISRAQF 200
+ G YGY E HY DP L+ P YA S F
Sbjct: 60 ISGIHAGQKYGYLIQLN---DELHYISDPYARALEGPLHYAPPFDSHKSF 106
>TIGR_CMR|VC_A1029 [details] [associations]
symbol:VC_A1029 "glycogen operon protein GlgX" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 487 (176.5 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 115/293 (39%), Positives = 153/293 (52%)
Query: 359 ISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAF 417
++ DP+LR VKLIAE WD G YQVG FP +G W+E N K RDI R F +G GF F
Sbjct: 336 VAQDPVLREVKLIAEPWDIGPNGYQVGNFP-FG-WNETNDKLRDITRSFWRGDLGFLKEF 393
Query: 418 AECLCGSPNLYQGGGRKPWN-SINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNN 476
A L GS +LY P+ ++N++ HDGF+L DLVSY KHN ANGE N DG N
Sbjct: 394 ATRLMGSRDLYSAANW-PYKLTVNYITYHDGFTLQDLVSYKHKHNEANGEQNRDGHGDNR 452
Query: 477 SWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDN 536
S N G EG+ +I+++ R RQ RNF L+ + G+P I D HT+ GNNN YC DN
Sbjct: 453 SDNYGFEGDTDSIVIRATRERQKRNFMASLLFAFGIPHILTADVLSHTQKGNNNAYCQDN 512
Query: 537 DINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFP----TADRLQWH---GHAPG 589
DI++ W+ E +K DF + + R + F +R+ W G
Sbjct: 513 DISWLNWENNE-TKQDFREWLAGMVAARQTYMVPFIRAFSGENRNNNRIAWRRVDGKPME 571
Query: 590 LPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTS 642
+ DW+ S I S E+ N ++ P LPK W + DT+
Sbjct: 572 MDDWNRLSSVALHIGIGSDGPEMLYLINQTNAPARFVLPKDRQQDWRLICDTN 624
Score = 140 (54.3 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 275 GEFY-NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
G+ Y NY+GCGNT + ++ ++D LR WVTE +DGFRFDLA+ + R
Sbjct: 271 GDHYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLAATLGR 321
Score = 94 (38.1 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 32/133 (24%), Positives = 56/133 (42%)
Query: 150 VWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENC 209
V H + G YGY E HY + DPYA+A+ +
Sbjct: 55 VKHTHISGIHAGQKYGYLIQLN---DELHY------ISDPYARALEGPLHYAPPFDSHKS 105
Query: 210 WPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVE 268
+ C+V + FDW+ + + +++++E HV+G T+ + + G YLG+V
Sbjct: 106 FDLPKCVVT--DTHFDWQNVAKPRIARDEMVLFETHVKGLTQLNPDVEKALRGKYLGLVS 163
Query: 269 K--LDHLKGEFYN 279
+ LD + + N
Sbjct: 164 QPMLDFYRQQNIN 176
Score = 55 (24.4 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 32/110 (29%), Positives = 38/110 (34%)
Query: 95 PTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVF 154
P P GATL G NF+I++ L L E E +A V H
Sbjct: 8 PFPLGATLDAEGCNFAIYAPANRDILLALFHADGSYETHQLEH----EYAG----VKHTH 59
Query: 155 LKGDFKDMLYGYKFDGKFSPQEGHYF-DPTKIVLD-P--YAKAVISRAQF 200
+ G YGY E HY DP L+ P YA S F
Sbjct: 60 ISGIHAGQKYGYLIQLN---DELHYISDPYARALEGPLHYAPPFDSHKSF 106
>TAIR|locus:2014500 [details] [associations]
symbol:DBE1 "debranching enzyme 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0004556 "alpha-amylase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0019156 "isoamylase activity" evidence=IDA;IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AC005278 GO:GO:0010021 GO:GO:0019252
eggNOG:COG1523 HOGENOM:HOG000239197 BRENDA:3.2.1.68 GO:GO:0019156
EMBL:AY139980 IPI:IPI00531675 PIR:F86164 RefSeq:NP_171830.1
RefSeq:NP_973751.1 UniGene:At.24041 ProteinModelPortal:Q8L735
SMR:Q8L735 STRING:Q8L735 PaxDb:Q8L735 PRIDE:Q8L735
EnsemblPlants:AT1G03310.1 EnsemblPlants:AT1G03310.2 GeneID:839531
KEGG:ath:AT1G03310 TAIR:At1g03310 InParanoid:Q9ZVT2 OMA:LNMGDEC
PhylomeDB:Q8L735 ProtClustDB:CLSN2679656 Genevestigator:Q8L735
Uniprot:Q8L735
Length = 882
Score = 351 (128.6 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 99/320 (30%), Positives = 151/320 (47%)
Query: 347 GTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGI-FPHWGIWSEWNGKYRDIVRQ 405
G L PPL++ I+ DP+L KLIA+ WD + + FPHW W+E N +Y VR
Sbjct: 541 GEQLSRPPLVEAIAFDPLLAETKLIADCWDPLEMMPKEVRFPHWKRWAELNTRYCRNVRN 600
Query: 406 FIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANG 465
F++G G A +CGS +++ G R P S N++ + G SL D+VS++ LA+
Sbjct: 601 FLRGR-GVLSDLATRICGSGDVFTDG-RGPAFSFNYISRNSGLSLVDIVSFSGPE-LAS- 656
Query: 466 EDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTK 525
SWNCG+EG V + R +Q+RNF +S GVP+++MGDE G +
Sbjct: 657 ---------ELSWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGIST 707
Query: 526 GGNNNTYCHDNDINYFRWDKKEES-KSDFFRFCCLLTKFR-HECESLGLSDFPTADRLQW 583
G+ F W+ + + +F +T R + DF + + W
Sbjct: 708 RGSPLLESRKP----FDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIVW 763
Query: 584 HGHAPGLPDWSDK-SRFVAFTLIDSVKGE---------------IYVAFNASHLPVIISL 627
+ + P W D S+F+A + + E +++ FNAS P + L
Sbjct: 764 YANDQTTPKWEDPASKFLALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESVVL 823
Query: 628 PKRP-GYRWEPLVDTSKPEP 646
P P G +W LVDT+ P P
Sbjct: 824 PSLPDGSKWRRLVDTALPFP 843
Score = 248 (92.4 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 65/186 (34%), Positives = 91/186 (48%)
Query: 93 GYPTPFGATLR--DGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDV 150
G+P P G + D NFS FS ++ + LCL D +K E+ LD + N+TGDV
Sbjct: 230 GHPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLY--DDSTTDKPALELDLDPYVNRTGDV 287
Query: 151 WHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCW 210
WH + + + YGY+ +E + IVLDPYA V LG
Sbjct: 288 WHASVDNTWDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATVVGKSVSQKYLGS----- 342
Query: 211 PQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSK--TEHPGTYLGVVE 268
L +P FDW D+ P L++Y ++V+GFT+H SSK + GT+ GV E
Sbjct: 343 -----LSKSPS--FDWGEDVSPNIPLEKLLVYRLNVKGFTQHRSSKLPSNVAGTFSGVAE 395
Query: 269 KLDHLK 274
K+ HLK
Sbjct: 396 KVSHLK 401
Score = 140 (54.3 bits), Expect = 7.2e-60, Sum P(3) = 7.2e-60
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 257 TEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRF 316
T G G+ + + KG N + NCN+PVV+Q +++ LRYWVTE HVDGF F
Sbjct: 471 TADSGALRGIDDSSYYYKGRA-NDLDSKSYLNCNYPVVQQLVLESLRYWVTEFHVDGFCF 529
Query: 317 DLASIMTRG 325
AS + RG
Sbjct: 530 INASSLLRG 538
Score = 54 (24.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 154 FLKGDFKDMLYGYKFDGKFSP 174
F+K +++ G +FDGK SP
Sbjct: 173 FVKSSLSELMLGLEFDGKESP 193
Score = 43 (20.2 bits), Expect = 9.7e-27, Sum P(3) = 9.7e-27
Identities = 20/93 (21%), Positives = 44/93 (47%)
Query: 578 ADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGY--RW 635
A L W+ G ++KS + L ++ +++ + + +PV+ ++ G R
Sbjct: 655 ASELSWNCGEEGA---TNKSAVLQRRL-KQIRNFLFIQYISLGVPVL-NMGDECGISTRG 709
Query: 636 EPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFL 668
PL+++ KP ++ L+S + I Q+ F+
Sbjct: 710 SPLLESRKPFDWNLLASAFGTQ---ITQFISFM 739
>UNIPROTKB|Q81KP1 [details] [associations]
symbol:BAS4597 "Putative pullulanase" species:1392
"Bacillus anthracis" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 123 (48.4 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 55/206 (26%), Positives = 93/206 (45%)
Query: 472 ETHNNS--WN-CGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGN 528
E H+N W+ + E + ++KK R + + L SQG+P + G E+ TK GN
Sbjct: 523 ECHDNMTMWDKLMRSNEESEEILKK--RHVLATAMVIL--SQGIPFLHAGQEFYRTKQGN 578
Query: 529 NNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAP 588
N+Y +++IN WD+KE+ + + + L R E + L + AD ++ H
Sbjct: 579 ENSYNANDEINQLDWDRKEK-EIETVNYIKGLIAIRKEHGAFRLQN---ADLIKKH---- 630
Query: 589 GLPDWSDKSRFVAFTL--IDSVKG--EIYVAFNASHLPVIISLPKRPGYRWEPLVDT--S 642
+ +A+ L ++S EI V FN+S + LPK W LV+ +
Sbjct: 631 -MTFLQTSPEVLAYHLEHVESFGPWKEIVVLFNSSLEAKTVQLPKEE--TWHVLVNEKQA 687
Query: 643 KPEPFDFLSSDLPAKEIAIKQYAPFL 668
K EP S KE+ + + ++
Sbjct: 688 KIEPI----SSFRGKELRLSPISTYI 709
Score = 122 (48.0 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 279 NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIP 338
N +G GN ++R+FIV+ + YW+TE +VDGFRFDL I+ + V I
Sbjct: 369 NGTGVGNDIASERKMMRKFIVESILYWLTEYNVDGFRFDLMGILDVDTINIIEKEVRNIK 428
Query: 339 IEGDLLTTGTPLRSP-PL 355
+ LL G L++P PL
Sbjct: 429 RDALLLGEGWDLQTPLPL 446
Score = 94 (38.1 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 187 LDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHV 246
+DPYAK+V ++GV+ + + + LP D I+YE+H+
Sbjct: 177 VDPYAKSVTVNGKYGVV-------------IDLEKTNVTKQEQLPPLQAMTDAILYELHI 223
Query: 247 RGFTRHESSKTEHPGTYLGVVEK 269
R T HE S GTY G++E+
Sbjct: 224 RDATIHEGSGVSKKGTYKGLMEE 246
>TIGR_CMR|BA_4953 [details] [associations]
symbol:BA_4953 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 123 (48.4 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 55/206 (26%), Positives = 93/206 (45%)
Query: 472 ETHNNS--WN-CGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGN 528
E H+N W+ + E + ++KK R + + L SQG+P + G E+ TK GN
Sbjct: 523 ECHDNMTMWDKLMRSNEESEEILKK--RHVLATAMVIL--SQGIPFLHAGQEFYRTKQGN 578
Query: 529 NNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAP 588
N+Y +++IN WD+KE+ + + + L R E + L + AD ++ H
Sbjct: 579 ENSYNANDEINQLDWDRKEK-EIETVNYIKGLIAIRKEHGAFRLQN---ADLIKKH---- 630
Query: 589 GLPDWSDKSRFVAFTL--IDSVKG--EIYVAFNASHLPVIISLPKRPGYRWEPLVDT--S 642
+ +A+ L ++S EI V FN+S + LPK W LV+ +
Sbjct: 631 -MTFLQTSPEVLAYHLEHVESFGPWKEIVVLFNSSLEAKTVQLPKEE--TWHVLVNEKQA 687
Query: 643 KPEPFDFLSSDLPAKEIAIKQYAPFL 668
K EP S KE+ + + ++
Sbjct: 688 KIEPI----SSFRGKELRLSPISTYI 709
Score = 122 (48.0 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 279 NYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIP 338
N +G GN ++R+FIV+ + YW+TE +VDGFRFDL I+ + V I
Sbjct: 369 NGTGVGNDIASERKMMRKFIVESILYWLTEYNVDGFRFDLMGILDVDTINIIEKEVRNIK 428
Query: 339 IEGDLLTTGTPLRSP-PL 355
+ LL G L++P PL
Sbjct: 429 RDALLLGEGWDLQTPLPL 446
Score = 94 (38.1 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 187 LDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHV 246
+DPYAK+V ++GV+ + + + LP D I+YE+H+
Sbjct: 177 VDPYAKSVTVNGKYGVV-------------IDLEKTNVTKQEQLPPLQAMTDAILYELHI 223
Query: 247 RGFTRHESSKTEHPGTYLGVVEK 269
R T HE S GTY G++E+
Sbjct: 224 RDATIHEGSGVSKKGTYKGLMEE 246
>TIGR_CMR|BA_2728 [details] [associations]
symbol:BA_2728 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR005323
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 Pfam:PF03714 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0030246
CAZy:CBM48 CAZy:CBM41 HOGENOM:HOG000059883 KO:K01200
InterPro:IPR011840 TIGRFAMs:TIGR02104 RefSeq:NP_845079.1
RefSeq:YP_019369.1 RefSeq:YP_028802.1 ProteinModelPortal:Q81PS2
DNASU:1087991 EnsemblBacteria:EBBACT00000012098
EnsemblBacteria:EBBACT00000015197 EnsemblBacteria:EBBACT00000019412
GeneID:1087991 GeneID:2817025 GeneID:2849078 KEGG:ban:BA_2728
KEGG:bar:GBAA_2728 KEGG:bat:BAS2542 OMA:MHKLSSS
ProtClustDB:CLSK875993 BioCyc:BANT260799:GJAJ-2607-MONOMER
BioCyc:BANT261594:GJ7F-2700-MONOMER Uniprot:Q81PS2
Length = 852
Score = 111 (44.1 bits), Expect = 3.8e-13, Sum P(3) = 3.8e-13
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 275 GEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASI 321
G F N +G GN ++R+F++D + YW E ++DGFRFDL I
Sbjct: 503 GTFANGTGVGNDTASERTMMRKFMIDSVTYWAKEYNLDGFRFDLMGI 549
Score = 107 (42.7 bits), Expect = 3.8e-13, Sum P(3) = 3.8e-13
Identities = 39/138 (28%), Positives = 70/138 (50%)
Query: 506 LMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKE--ESKSDFFRFCCLLTKF 563
L+ SQG+P + G E+ TK G++N+Y + IN W ++ ++ D+ + L +
Sbjct: 695 LLTSQGIPFLHAGQEFMRTKYGDHNSYKSPDSINQMDWLRRATFNNEVDYMKG---LIEL 751
Query: 564 RHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIY-VAFNASHLP 622
R + + ++ +A++++ H P V +T I+ K E + VA NA+
Sbjct: 752 RKKYPAFRMT---SAEQIKTHVSFIDAP-----KNTVTYT-IEGNKHEYFTVAHNANREA 802
Query: 623 VIISLPKRPGYRWEPLVD 640
V I+LP + G W+ LVD
Sbjct: 803 VEITLPSK-G-PWKVLVD 818
Score = 89 (36.4 bits), Expect = 3.8e-13, Sum P(3) = 3.8e-13
Identities = 29/95 (30%), Positives = 45/95 (47%)
Query: 175 QEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKY 234
Q+G Y+ + D + +AV A+ + D+ + L T +++ LK
Sbjct: 293 QKGLYYTYKVKIGDKWTEAVDPYARAASVNGDKGA---VVDLEETNPKKWNTNKKPKLKN 349
Query: 235 PQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEK 269
P+ D IIYE+HVR + S + G YLGV EK
Sbjct: 350 PE-DAIIYELHVRDLSIQPESGIKQKGKYLGVTEK 383
Score = 53 (23.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 31/128 (24%), Positives = 48/128 (37%)
Query: 67 IRASKSAELETAVIKKPQSQRFQVSKGYP-TPFGATLRDGGVNFSIFSSNAVSATLCLIT 125
++ A+ T + K +S+ F Y G F +++ A A L +T
Sbjct: 206 VKIENLADTNTEIGKVIRSEEFDYLFYYGGNDLGNIYTPQHTKFRVWAPTASEAKL--VT 263
Query: 126 LSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKI 185
+ K+ EI + T W LKG+ K + Y YK K D
Sbjct: 264 YKKWND-KIGTEINMQQGEKGT---WKAELKGNQKGLYYTYKV--KIG-------DKWTE 310
Query: 186 VLDPYAKA 193
+DPYA+A
Sbjct: 311 AVDPYARA 318
>TIGR_CMR|CPS_1694 [details] [associations]
symbol:CPS_1694 "putative pullulanase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004135
"amylo-alpha-1,6-glucosidase activity" evidence=ISS] [GO:0005976
"polysaccharide metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR005323 InterPro:IPR006047 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 Pfam:PF03714
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
GO:GO:0005975 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0030246
CAZy:CBM48 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014756 SUPFAM:SSF81296 eggNOG:COG1523
HOGENOM:HOG000251916 InterPro:IPR024561 Pfam:PF11852
RefSeq:YP_268432.1 ProteinModelPortal:Q484T3 STRING:Q484T3
CAZy:CBM41 GeneID:3520234 KEGG:cps:CPS_1694 PATRIC:21466561
OMA:FSAQDES ProtClustDB:CLSK938185
BioCyc:CPSY167879:GI48-1771-MONOMER Uniprot:Q484T3
Length = 1429
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 265 GVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR 324
G D G N + C +T H ++ + +VD L+ W + DGFRFD IM++
Sbjct: 662 GYYHSRDVTTGAVQNSTCCSDTA-LEHRMMDKLMVDSLKQWTEQYQFDGFRFD---IMSQ 717
Query: 325 GS 326
GS
Sbjct: 718 GS 719
Score = 65 (27.9 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 226 WEGDLPLKYPQ-RDLIIYEVHVRGFT-RHESSKTEHPGTYLGVVE 268
W+G D +IYE H+R F+ + ES+ E+ G +L E
Sbjct: 455 WDGHAVSTIENYEDAVIYEGHIRDFSAQDESTSVENRGKFLAFTE 499
Score = 63 (27.2 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 506 LMVSQGVPMISMGDEYGHTKGGNNNTY 532
+++SQG+P + MG ++ +K + NTY
Sbjct: 873 VLLSQGIPFLQMGGDFLRSKSLDRNTY 899
Score = 57 (25.1 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 397 GKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSY 456
G D V + KGTD G+ S +Y + P + IN+V HD +L D++ +
Sbjct: 803 GTQTDYVLKTFKGTD-VVGS-------SAGMY---AKDPADIINYVSKHDNETLWDILQF 851
Query: 457 NQKHNLANGE 466
+ N E
Sbjct: 852 KLSPEMNNSE 861
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 153 VFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYA 191
+ G+ + +L+ + DG++S + H ++ + D YA
Sbjct: 84 IIFAGENQALLFYNRADGEYSDYKMHNWNSAEC--DAYA 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 691 675 0.0010 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 634 (67 KB)
Total size of DFA: 432 KB (2204 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.25u 0.10s 60.35t Elapsed: 00:00:03
Total cpu time: 60.25u 0.10s 60.35t Elapsed: 00:00:03
Start: Tue May 21 09:09:11 2013 End: Tue May 21 09:09:14 2013