Query 005552
Match_columns 691
No_of_seqs 267 out of 2290
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 18:10:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005552.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2060-2064//hhsearch_pdb/005552hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vr5_A Glycogen operon protein 1.0 1 1 692.3 52.0 550 88-685 10-715 (718)
2 1bf2_A Isoamylase; hydrolase, 1.0 1 1 684.1 51.0 565 92-686 1-750 (750)
3 2wsk_A Glycogen debranching en 1.0 1 1 675.9 45.8 531 90-685 4-657 (657)
4 3faw_A Reticulocyte binding pr 1.0 1 1 582.0 35.0 515 82-687 122-815 (877)
5 2fhf_A Pullulanase; multiple d 1.0 1 1 572.5 24.1 512 76-687 274-1070(1083)
6 2wan_A Pullulanase; hydrolase, 1.0 1 1 568.7 38.5 486 79-685 300-921 (921)
7 2e8y_A AMYX protein, pullulana 1.0 1 1 562.5 35.2 485 79-687 90-712 (718)
8 2ya0_A Putative alkaline amylo 1.0 1 1 559.6 33.7 519 84-689 4-708 (714)
9 2ya1_A Putative alkaline amylo 1.0 1 1 555.3 34.2 516 85-687 312-1013(1014)
10 4aio_A Limit dextrinase; hydro 1.0 1 1 545.4 25.4 526 72-686 105-882 (884)
No 1
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=1.00 E-value=1 Score=692.28 Aligned_cols=550 Identities=39% Similarity=0.701 Sum_probs=453.5
Q ss_pred CCCCCCCCCCCCEEE--ECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEE
Q ss_conf 322579889997089--499489999757898589995648996688312476455556788996999983999996299
Q 005552 88 FQVSKGYPTPFGATL--RDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYG 165 (691)
Q Consensus 88 ~~~~~g~~~~lGa~~--~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g~~~g~~Y~ 165 (691)
..+..|.|.||||++ .++||+|+||||+|++|+|+|++..++ ..+...++|.+ +++|||+++|+++.+|++|+
T Consensus 10 ~~~~~g~~~~lGa~~~~~~~g~~F~vwap~A~~V~l~lf~~~~~--~~~~~~~~m~~---~~~gvw~~~v~~~~~g~~Y~ 84 (718)
T 2vr5_A 10 RPLRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQ--KYPKEIIEVKN---KTGDIWHVFVPGLRPGQLYA 84 (718)
T ss_dssp SCCBCCCSCSSEEEEEGGGTEEEEEEECSSCSEEEEEECCSSCC--SSCSEEEEECE---ESSSEEEEEEETCCTTCEEE
T ss_pred CCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCC--CCCCEEEECCC---CCCCEEEEEECCCCCCCEEE
T ss_conf 32168988799556961799699999999999889999838998--77436885836---87998999968899999899
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC-------CCC--------CCCCCCCEECCCCCCCCCCCCCC-
Q ss_conf 99839568999974589710038354331013456887-------999--------99888760000399999999999-
Q 005552 166 YKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVL-------GPD--------ENCWPQMACLVPTPEDEFDWEGD- 229 (691)
Q Consensus 166 y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~-------~~~--------~~~~~~~~~~v~~~~~~f~W~~~- 229 (691)
|+|++++.|..|+++++.++++||||+++..+..|+.. .|. ++.....+|+|+++ .|+|+++
T Consensus 85 y~v~g~~~p~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d~--~~~W~~~~ 162 (718)
T 2vr5_A 85 YRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVINP--YFEWDDED 162 (718)
T ss_dssp EEEECCEETTTTEECCTTSCBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCCC--CCCCTTGG
T ss_pred EEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCCCCCCC
T ss_conf 9993323766574147771675837400346766661002333577543233456665333541178557--76877653
Q ss_pred --CCCCCCCCCCEEEEEEECCCCC-CCCCCCCCCCCHHCCCCC--CCCC-------------------------------
Q ss_conf --9999999870399984157422-699999887432020111--2465-------------------------------
Q 005552 230 --LPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVEK--LDHL------------------------------- 273 (691)
Q Consensus 230 --~~~~~~~~~~iIYElhVr~Ft~-~~~~~~~~~Gtf~gi~ek--LdyL------------------------------- 273 (691)
.++..+|+++||||+|||+|+. +++++...+|||+|++++ ||||
T Consensus 163 ~~~~~~~~~~~~vIYeihv~~f~~~~~~~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~w 242 (718)
T 2vr5_A 163 FIKGKKVPLKDTVIYEVHVKGFTKLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYW 242 (718)
T ss_dssp GGSSSCCCTTSCCEEEECTTTTTTTCTTSCTTSTTSHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSS
T ss_pred CCCCCCCCHHHCEEEEEECCHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCC
T ss_conf 33578888257889998703221679998746674999984211349999759982997377706765543235776766
Q ss_pred -------------------------------------------------------C--------------------C--C
Q ss_conf -------------------------------------------------------8--------------------9--3
Q 005552 274 -------------------------------------------------------K--------------------G--E 276 (691)
Q Consensus 274 -------------------------------------------------------~--------------------g--~ 276 (691)
. + .
T Consensus 243 GY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~ 322 (718)
T 2vr5_A 243 GYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRY 322 (718)
T ss_dssp CCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSS
T ss_pred CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE
T ss_conf 74754475617644689777742999999999999879989999504755576666863011578887653867999853
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 10366866867899999999999999999993560299992552012468654354225865456655689989993679
Q 005552 277 FYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLI 356 (691)
Q Consensus 277 y~~~sg~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~ 356 (691)
|.++++|+++||+++|+|+++|+++++||++||||||||||+++++.++ +|. +. ....++
T Consensus 323 ~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~--~~~-~~-----------------~~~~~~ 382 (718)
T 2vr5_A 323 YLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARE--LYS-VN-----------------MLNTFF 382 (718)
T ss_dssp BCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBS--SSS-BC-----------------TTCHHH
T ss_pred EECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHC--CCC-CC-----------------CHHHHH
T ss_conf 4157786670367999999999999999999859888997512331002--477-42-----------------028999
Q ss_pred HHHHCCCCCCCCEEEEECCCCC-CCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9974299988748994037889-864336788885341343710089999781999928889999819986425999999
Q 005552 357 DLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKP 435 (691)
Q Consensus 357 ~~i~~dp~~~~~~liaE~w~~~-~~~~~~~fp~~~~~~~wn~~f~~~~~~~~~g~~~~~~~~~~~l~gs~~~~~~~~~~~ 435 (691)
+.+..+++++++++|||.|+.+ +.++.++||. .+++||+.|++.++.+++|+.+....++..+.++...|...++.|
T Consensus 383 ~~i~~~~~~~~~~liaE~w~~~~~~~~~~~f~~--~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~~~~~~p 460 (718)
T 2vr5_A 383 IALQQDPILSQVKLIAEPWDVGQGGYQVGNFPY--QWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTP 460 (718)
T ss_dssp HHHHHCTTGGGSEEEECCBCSSTTCBCTTCSCT--TEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHGGGTCCG
T ss_pred HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCC
T ss_conf 999858456783899445346777321367761--688871799999999973796129999998754355532457885
Q ss_pred CCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 86177753389986444663012342126999999999987776688883023899999999999999999860893168
Q 005552 436 WNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMI 515 (691)
Q Consensus 436 ~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~llt~pGiP~I 515 (691)
..++||++|||++|+.++++|..|||.++|+.++||...|.|||||.+|.+.++.+...+.+++|++++++|++||+|||
T Consensus 461 ~~~vnf~~~HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~~G~P~i 540 (718)
T 2vr5_A 461 FASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMI 540 (718)
T ss_dssp GGEEECSCCSSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 60566441278888999988765102330443345544555432233267777778888999999999999974898489
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------CCEEE---C
Q ss_conf 157765567899999777899865336476223310699999999999975745899998887--------63376---2
Q 005552 516 SMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA--------DRLQW---H 584 (691)
Q Consensus 516 y~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~k~Li~LRk~~paL~~g~~~~~--------~~i~w---~ 584 (691)
|||||+|+++.|++|+||+++.+++|+|+..+.. .++++|||+||+|||++|+|+.+++..+ .++.| +
T Consensus 541 y~GdE~G~~~~G~~~~y~~~~~~~~~~W~~~~~~-~~l~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (718)
T 2vr5_A 541 LGGDELSRTQRGNNNAFCQDNEITWFDWNLDERK-SKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLE 619 (718)
T ss_dssp ETTTTTTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHHHCGGGSCSSCCCSSBCTTCSSBSEEEECSS
T ss_pred EECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 8241430567898875457763445675545333-699999999999986491103675345553345677746997788
Q ss_pred CCCCCCCCCCCCCCEEEEEEECC-------C-----CCEEEEEEECCCCCEEEECCCCC-CCCEEEEECCCCCCCCCCCC
Q ss_conf 67999988889994999999826-------7-----89799999499985899769999-99639991389999888768
Q 005552 585 GHAPGLPDWSDKSRFVAFTLIDS-------V-----KGEIYVAFNASHLPVIISLPKRP-GYRWEPLVDTSKPEPFDFLS 651 (691)
Q Consensus 585 ~~~~~~~~~~~~~~vlaf~R~~~-------~-----~~~llVv~N~s~~~~~v~lp~~~-g~~w~~i~~s~~~~~~~~~~ 651 (691)
+..++.++|....++++|.|... . ++.++|++|++.+++++.||..+ |..|+.+++++....
T Consensus 620 g~~~~~~~~~~~~~~la~~r~~~~~~~~~~~~~~~~~~~ilv~~N~~~~~~~~~lp~~~~g~~w~~l~~t~~~~~----- 694 (718)
T 2vr5_A 620 GREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKPEE----- 694 (718)
T ss_dssp SCBCCTTTTTSEESEEEEEEEGGGCCCBCTTSCBCCCCEEEEEEECCSSCEEEECCSSEEEEEEESCCSCCCTTS-----
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCC-----
T ss_conf 873784444788878999993886655455666667875999999999867997889889982899955898765-----
Q ss_pred CCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEE
Q ss_conf 9981368876420887878328850785999974
Q 005552 652 SDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL 685 (691)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~ 685 (691)
.. ......++|+|+|++||+.
T Consensus 695 ~~-------------~~~~~~~~l~~~s~~vl~~ 715 (718)
T 2vr5_A 695 RI-------------IEGEKELEIEGRTALVYRR 715 (718)
T ss_dssp SC-------------CCTTCEEEECSSEEEEEEE
T ss_pred CC-------------CCCCCEEEECCCEEEEEEE
T ss_conf 53-------------4679768977868999995
No 2
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=684.14 Aligned_cols=565 Identities=30% Similarity=0.504 Sum_probs=444.7
Q ss_pred CCCCCCCCEEEECCC--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC------CCC-
Q ss_conf 798899970894994--89999757898589995648996688312476455556788996999983999------996-
Q 005552 92 KGYPTPFGATLRDGG--VNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDF------KDM- 162 (691)
Q Consensus 92 ~g~~~~lGa~~~~~g--~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g~~------~g~- 162 (691)
++.+.||||++.++| |+|+||||+|++|+|||++. |+..++..+++|. .+++|||+++|+++. +|+
T Consensus 1 ~~~~~~lGa~~~~~g~~~~F~vwap~A~~V~l~l~~~--~~~~~~~~~~~m~---~~~~gvW~~~v~~~~~~~~~~~g~y 75 (750)
T 1bf2_A 1 AINSMSLGASYDAQQANITFRVYSSQATRIVLYLYSA--GYGVQESATYTLS---PAGSGVWAVTVPVSSIKAAGITGAV 75 (750)
T ss_dssp CCSTTCCEEEECTTSSEEEEEEECSSCSEEEEEEESS--SSSCCCSEEEECE---ECSTTEEEEEEEHHHHHHTTCCSCC
T ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECC--CCCCCCCEEEECC---CCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 9977689727958988799999999999899998726--8888651588453---4889989999777444455689977
Q ss_pred EEEEEECCCCCC------------------CCCCCCCCCCCCCCCCCCCEECCCCCCC--------C----CCCCCCCCC
Q ss_conf 299998395689------------------9997458971003835433101345688--------7----999998887
Q 005552 163 LYGYKFDGKFSP------------------QEGHYFDPTKIVLDPYAKAVISRAQFGV--------L----GPDENCWPQ 212 (691)
Q Consensus 163 ~Y~y~i~~~~~~------------------~~g~~~~~~~~~~DPYA~~~~~~~~~~~--------~----~~~~~~~~~ 212 (691)
+|+|+|+|++.| ..|+++++.++++||||+++..+..++. . .+.++....
T Consensus 76 ~Y~y~v~g~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 155 (750)
T 1bf2_A 76 YYGYRAWGPNWPYASNWGKGSQAGFVSDVDANGDRFNPNKLLLDPYAQEVSQDPLNPSNQNGNVFASGASYRTTDSGIYA 155 (750)
T ss_dssp EEEEEEEBTTBCCCTTCCTTCCTTCCCSSCTTCCCCCTTSCBCCTTCSCBSCCSSCSSCCCGGGGBCSTTTTTCCCTTTS
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999976625655433446654311122345742377754568676044357777534443111344333456652236
Q ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-CCCCCCCCCCCHHCCCCCCCCC------------------
Q ss_conf 600003999999999999999999870399984157422-6999998874320201112465------------------
Q 005552 213 MACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVEKLDHL------------------ 273 (691)
Q Consensus 213 ~~~~v~~~~~~f~W~~~~~~~~~~~~~iIYElhVr~Ft~-~~~~~~~~~Gtf~gi~ekLdyL------------------ 273 (691)
..|+|+++ .|+|+ +.++..+|+++||||+||++|+. +++.+...+|||+|++++||||
T Consensus 156 ~~s~v~~~--~~~W~-d~~~~~~~~~~vIYe~hv~~f~~~~~~~~~~~~Gt~~gl~~~l~yLk~LGvt~V~L~Pi~~~~~ 232 (750)
T 1bf2_A 156 PKGVVLVP--STQST-GTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQN 232 (750)
T ss_dssp CCEECCCC--CCCCC-CCCCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSC
T ss_pred CCEEEECC--CCCCC-CCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 65499689--88877-6788899654679999841852769998756785999999878999876988799888645765
Q ss_pred -----------------------------------------------------------------------CC-------
Q ss_conf -----------------------------------------------------------------------89-------
Q 005552 274 -----------------------------------------------------------------------KG------- 275 (691)
Q Consensus 274 -----------------------------------------------------------------------~g------- 275 (691)
.+
T Consensus 233 ~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~ 312 (750)
T 1bf2_A 233 DANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTA 312 (750)
T ss_dssp TTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCB
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 44332323446666557573405663701168888751799999999999988998999985166557653334555568
Q ss_pred ---------------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf ---------------------31036686686789999999999999999999356029999255201246865435422
Q 005552 276 ---------------------EFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNV 334 (691)
Q Consensus 276 ---------------------~y~~~sg~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~ 334 (691)
.|.++++|+++||+++|+|+++|+++++||++||||||||||+++++.++ +|.....
T Consensus 313 p~~~~~~~d~~~~y~~~~~~~~~~~~~g~~~~ln~~~p~V~~~i~d~l~~W~~e~gvDGfR~D~a~~l~~~--f~~~~~~ 390 (750)
T 1bf2_A 313 TIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNS--CLNGAYT 390 (750)
T ss_dssp BCSSHHHHHHHHHBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBC--CSSSSCC
T ss_pred CCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCH--HHHCCCC
T ss_conf 87443467897634787999724157786772055998999999999999999839768999664653700--1101122
Q ss_pred CCCCCCCCCCCCCCCCC-C---HHHHHHHHCCCC---C--CCCEEEEECCCCC-CCCCCCCCCCCCCCCEECCCCCHHHH
Q ss_conf 58654566556899899-9---367999742999---8--8748994037889-86433678888534134371008999
Q 005552 335 YGIPIEGDLLTTGTPLR-S---PPLIDLISNDPI---L--RGVKLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVR 404 (691)
Q Consensus 335 ~~~~~~~~~~~~g~~~~-~---~~~~~~i~~dp~---~--~~~~liaE~w~~~-~~~~~~~fp~~~~~~~wn~~f~~~~~ 404 (691)
.+.......+..+. . .++++.++++|+ + +++++|||.|+.+ +.++++.||. .+++||+.|++.++
T Consensus 391 ---~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~liaE~w~~~~~~~~~~~F~~--~~~~wn~~~rd~l~ 465 (750)
T 1bf2_A 391 ---ASAPNCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLR 465 (750)
T ss_dssp ---TTSTTCTTCSCCBCTTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT--TCEEECHHHHHHHH
T ss_pred ---CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCHHHCCCCC--CHHHHHHHHHHHHH
T ss_conf ---2344444554330002304899999996840122157881699354557866013316780--07887489999999
Q ss_pred HHHCC---CCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC---CCCCCCCCCCCCCC
Q ss_conf 97819---9992888999981998642599999986177753389986444663012342126---99999999998777
Q 005552 405 QFIKG---TDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLAN---GEDNNDGETHNNSW 478 (691)
Q Consensus 405 ~~~~g---~~~~~~~~~~~l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~---g~~~~dg~~~~~sw 478 (691)
.+++| +.+...+++..|.++...|....+.|..++||++|||++|+.|+++|+.|||.++ |+ ++||+++|+||
T Consensus 466 ~f~~g~~~~~~~~~~l~~~l~~~~~~y~~~~~~p~~~vnfv~nHD~~~l~dl~s~~~~~n~~~~~~G~-n~dG~~~n~s~ 544 (750)
T 1bf2_A 466 QAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGP-SDGGTSTNYSW 544 (750)
T ss_dssp HHHHCBTTBCCCHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCC-CCCCCSCCCCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCC-CCCCCCCCCCC
T ss_conf 99647777887899999875466545335788821078874468998689887653021113321267-77876443331
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 66888830238999999999999999998608931681577655678999997778998653364762233106999999
Q 005552 479 NCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCC 558 (691)
Q Consensus 479 ~~g~~g~~~~~~~~~~~~~~~k~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~k 558 (691)
|||.+|++. +...+.+++|++++++|++||+||||||||+|+++.|++|+||+++.+++++|+..+.. .++++|++
T Consensus 545 n~g~~g~t~---~~~~r~~~~r~a~a~ll~~~G~P~i~~GdE~g~t~~G~~n~y~~~~~i~~~dW~~~~~~-~~l~~~~~ 620 (750)
T 1bf2_A 545 DQGMSAGTG---AAVDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQ-SNFYTFAQ 620 (750)
T ss_dssp CTTTTTTSC---CHHHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHH
T ss_pred CCCCCCCCH---HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHH
T ss_conf 344557740---56789999999999999748960135426236577888886558886653577866443-59999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCEEE---CCCCCCCCCCCC-CCCEEEEEEECC---CCCEEEEEEECCCCCEEEECCCCC
Q ss_conf 9999997574589999888763376---267999988889-994999999826---789799999499985899769999
Q 005552 559 LLTKFRHECESLGLSDFPTADRLQW---HGHAPGLPDWSD-KSRFVAFTLIDS---VKGEIYVAFNASHLPVIISLPKRP 631 (691)
Q Consensus 559 ~Li~LRk~~paL~~g~~~~~~~i~w---~~~~~~~~~~~~-~~~vlaf~R~~~---~~~~llVv~N~s~~~~~v~lp~~~ 631 (691)
+||+|||++|+|+.+.+..+.++.| ++..++.++|.+ ..++++|.|... ..+.++|++|++.+++++.||..+
T Consensus 621 ~Li~lRk~~pal~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~la~~r~~~~~~~~~~~~vv~N~~~~~~~~~lp~~~ 700 (750)
T 1bf2_A 621 RLIAFRKAHPALRPSSWYSGSQLTWYQPSGAVADSNYWNNTSNYAIAYAINGPSLGDSNSIYVAYNGWSSSVTFTLPAPP 700 (750)
T ss_dssp HHHHHHHHCGGGSCSSCCCTTTEEEECTTSSBCCHHHHTCTTCCEEEEEECGGGGTCSSCEEEEEECSSSCEEEECCCCS
T ss_pred HHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCC
T ss_conf 99999864911067753566757996588874674444589998899999798788887799998799987799788988
Q ss_pred -CCCEEEEECCCC--CCCCCCCCCCCCHHHHHHHHCCCCCCCC--EEEEECCEEEEEEEC
Q ss_conf -996399913899--9988876899813688764208878783--288507859999746
Q 005552 632 -GYRWEPLVDTSK--PEPFDFLSSDLPAKEIAIKQYAPFLDAN--LYPMLSYSSIILLLS 686 (691)
Q Consensus 632 -g~~w~~i~~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~p~s~~vl~~~ 686 (691)
|..|+.+++++. ....+....... . ..... .++|||+|++||+.+
T Consensus 701 ~g~~w~~~~~t~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~v~~~s~~v~~~~ 750 (750)
T 1bf2_A 701 SGTQWYRVTDTCDWNDGASTFVAPGSE---T-------LIGGAGTTYGQCGQSLLLLISK 750 (750)
T ss_dssp SSSCEEEEEECSGGGCSTTSBCCTTCC---E-------EEESTTCEEEECSSEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCC---C-------CCCCCCCEEEECCCEEEEEEEC
T ss_conf 998089995488766787644454543---1-------1379742588789889999979
No 3
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=1.00 E-value=1 Score=675.95 Aligned_cols=531 Identities=36% Similarity=0.670 Sum_probs=436.9
Q ss_pred CCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEC
Q ss_conf 25798899970894994899997578985899956489966883124764555567889969999839999962999983
Q 005552 90 VSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFD 169 (691)
Q Consensus 90 ~~~g~~~~lGa~~~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g~~~g~~Y~y~i~ 169 (691)
+..|.+.+|||++.++|++|+||||+|++|+|+|++..+ . ...++|. ++++|+|+++|+++.+|++|+|+|+
T Consensus 4 ~~~g~~~~lGa~~~~~g~~F~vwap~A~~V~l~~f~~~~----~-~~~~~m~---~~~~g~w~~~v~~~~~g~~Y~y~v~ 75 (657)
T 2wsk_A 4 LAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANG----Q-EHRYDLP---GHSGDIWHGYLPDARPGLRYGYRVH 75 (657)
T ss_dssp CBCCCSCSSSEEECSSEEEEEEECSSCSEEEEEEECTTC----C-EEEEECC---EEETTEEEEEEETCCTTCEEEEEEE
T ss_pred CCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCC----C-EEEEECC---CCCCCEEEEEECCCCCCCEEEEEEE
T ss_conf 578988898727969938999999999998999987999----7-7889686---7979989999798999998999992
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC--------CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 95689999745897100383543310134568879--------9999888760000399999999999999999987039
Q 005552 170 GKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLG--------PDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLII 241 (691)
Q Consensus 170 ~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~f~W~~~~~~~~~~~~~iI 241 (691)
+++.|..|+++++.++++||||+++..+..|+... +.++.....+|+|+++ .|.|+++.++..+|+++||
T Consensus 76 ~~~~p~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d~--~~~W~~~~~~~~~~~~~vI 153 (657)
T 2wsk_A 76 GPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVD--HYDWEDDAPPRTPWGSTII 153 (657)
T ss_dssp CCCCGGGTCCCCTTSCBCCTTCSCEESCCCCCGGGBCCSSSCCCCCCGGGSCEEECCCC--CCCCTTCCCCCCCGGGCCE
T ss_pred EEECCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCCCCCCCCCCCCCHHCEE
T ss_conf 44067667422662298286842035776566222454223455665334654289678--7787777788898035579
Q ss_pred EEEEECCCCC-CCCCCCCCCCCHHCCCCC--CCCC---------------------------------------------
Q ss_conf 9984157422-699999887432020111--2465---------------------------------------------
Q 005552 242 YEVHVRGFTR-HESSKTEHPGTYLGVVEK--LDHL--------------------------------------------- 273 (691)
Q Consensus 242 YElhVr~Ft~-~~~~~~~~~Gtf~gi~ek--LdyL--------------------------------------------- 273 (691)
||+|||+|+. +++++...+|||+|++++ ||||
T Consensus 154 Yei~v~~F~~~~~~~~~~~~G~~~gi~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~ 233 (657)
T 2wsk_A 154 YEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAY 233 (657)
T ss_dssp EEECHHHHHTTCTTSCGGGTTSHHHHTSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGG
T ss_pred EEEECCEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99974233124899874678699997463001899973988799878540676544333466565586744487888777
Q ss_pred ------------------------------------C-----------------------CCCCCCCCCCCCCCCCCHHH
Q ss_conf ------------------------------------8-----------------------93103668668678999999
Q 005552 274 ------------------------------------K-----------------------GEFYNYSGCGNTFNCNHPVV 294 (691)
Q Consensus 274 ------------------------------------~-----------------------g~y~~~sg~g~dln~~np~V 294 (691)
. +.|.++++|+++||+++|+|
T Consensus 234 G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v 313 (657)
T 2wsk_A 234 ACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAV 313 (657)
T ss_dssp CSSGGGHHHHHHHHHHHHHHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCHHH
T ss_conf 68987679999999999998799899998515523566667522126899865257789998237888677536799999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 99999999999993560299992552012468654354225865456655689989993679997429998874899403
Q 005552 295 RQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEA 374 (691)
Q Consensus 295 r~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~dp~~~~~~liaE~ 374 (691)
|++|+++++||++||||||||||++.+|.++..++. ...+++.+.++++++++++|||.
T Consensus 314 ~~~i~d~~~~W~~e~gvDGfR~D~~~~l~~~~~~~~---------------------~~~~~~~i~~~~~~~~~~liaE~ 372 (657)
T 2wsk_A 314 VDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQ---------------------DAPLFTAIQNCPVLSQVKLIAEP 372 (657)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEETTTHHHHBSSSBCT---------------------TCHHHHHHHHCTTGGGSEEEECC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCH---------------------HHHHHHHHHHCCCCCCCEEEECC
T ss_conf 999999999999970984899925342465445311---------------------48999999848446894899732
Q ss_pred CCCC-CCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH
Q ss_conf 7889-864336788885341343710089999781999928889999819986425999999861777533899864446
Q 005552 375 WDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADL 453 (691)
Q Consensus 375 w~~~-~~~~~~~fp~~~~~~~wn~~f~~~~~~~~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~ 453 (691)
|+.+ +.++.++||. .+++||+.|++.++.+++|+.+...+++..+.++...|....+.+..++||++|||++|+.++
T Consensus 373 w~~~~~~~~~~~f~~--~~~~~n~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~y~~~~~~~~~~~nf~~~HD~~~l~dl 450 (657)
T 2wsk_A 373 WDIAPGGYQVGNFPP--LFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC 450 (657)
T ss_dssp BCSSTTCBCTTCSCT--TEEEEEHHHHHHHHHHHHTSCSCHHHHHHHHBTTHHHHSSTTCCGGGEEECSCCSSSCCHHHH
T ss_pred CCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEHHHCCCCCCHHHH
T ss_conf 347887320367773--189871899999999964698609999998756554533577782302225342898768999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 63012342126999999999987776688883023899999999999999999860893168157765567899999777
Q 005552 454 VSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYC 533 (691)
Q Consensus 454 ~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~ 533 (691)
++|..+||.++|+.++||.+.+++|||+.+|.+.++.+...+.+++|++++++|++||+||||||||+|+++.|++++||
T Consensus 451 ~~~~~~~~~~~g~~~~~g~~~~~s~n~~~~g~~~~~~~~~~~~~~~r~~~a~ll~~~G~P~iy~GdE~G~~~~g~~~~y~ 530 (657)
T 2wsk_A 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYC 530 (657)
T ss_dssp TTCSSCCCGGGSSTTCSSCSCCCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHHSBSEEEEETTTTTTCCCTTCSCCTT
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCC
T ss_conf 98773223442544567754443201465467776667889999999999999871548778721122245689888423
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCEEECCC---CCCCCCCCCCCCEEEEEEECCC
Q ss_conf 899865336476223310699999999999975745899998887--63376267---9999888899949999998267
Q 005552 534 HDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA--DRLQWHGH---APGLPDWSDKSRFVAFTLIDSV 608 (691)
Q Consensus 534 ~~~~~~~~~W~~~~~~~~~l~~~~k~Li~LRk~~paL~~g~~~~~--~~i~w~~~---~~~~~~~~~~~~vlaf~R~~~~ 608 (691)
+++.+++|+|+.. ..++++|||+||+|||++|+|+.+++..+ ..+.|... .+..++|.+...+++|.|.
T Consensus 531 ~d~~~~~~~W~~~---~~~l~~~~~~Li~lRk~~pal~~g~~~~~~~~~v~~~~~~g~~~~~~~w~~~~~~la~~r~--- 604 (657)
T 2wsk_A 531 QDNQLTWLDWSQA---SSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLS--- 604 (657)
T ss_dssp CCSTTTSCCGGGC---CHHHHHHHHHHHHHHTTCHHHHSCCCCCTTSSSEEEECTTSSBCCHHHHHHSCSEEEEEET---
T ss_pred CCCCCCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEC---
T ss_conf 6886674585512---0899999999999986490003675333677756998479852443345677756999986---
Q ss_pred CCEEEEEEECCCCCEEEECCCCCCCCEEE--EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEE
Q ss_conf 89799999499985899769999996399--913899998887689981368876420887878328850785999974
Q 005552 609 KGEIYVAFNASHLPVIISLPKRPGYRWEP--LVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL 685 (691)
Q Consensus 609 ~~~llVv~N~s~~~~~v~lp~~~g~~w~~--i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~ 685 (691)
+.++|++|++.+++++.||. + .|+. +++++... .....++|||+|++||++
T Consensus 605 -~~~lv~~N~s~~~~~~~lp~--g-~~~~~~l~~~~~~~----------------------~~~~~~~l~~~s~~vl~~ 657 (657)
T 2wsk_A 605 -DRFLIAINATLEVTEIVLPA--G-EWHAIPPFAGEDNP----------------------VITAVWQGPAHGLCVFQR 657 (657)
T ss_dssp -TTEEEEEECSSSCEEEECCS--S-CCEECTTSSCTTCC----------------------CCCSEEEECTTEEEEEEC
T ss_pred -CCEEEEECCCCCCEEEECCC--C-CEEEEEEECCCCCC----------------------CCCCEEEECCCEEEEEEC
T ss_conf -97999995899866897489--8-54998885389976----------------------668638988878999959
No 4
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=1.00 E-value=1 Score=582.02 Aligned_cols=515 Identities=22% Similarity=0.340 Sum_probs=376.5
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCC--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEC---
Q ss_conf 4344433225798899970894994--89999757898589995648996688312476455556788996999983---
Q 005552 82 KPQSQRFQVSKGYPTPFGATLRDGG--VNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLK--- 156 (691)
Q Consensus 82 ~~~~~~~~~~~g~~~~lGa~~~~~g--~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~--- 156 (691)
...+|+.+.|.| +|||++.++| |+|+||||+|++|+||||++++++ ++..+++|.+ .++|||+++|+
T Consensus 122 ~~~~d~~~~y~g---~lGa~~~~~g~~v~F~vwAP~A~~V~L~l~d~~~~~--~~~~~~~m~~---~~~gvW~~~v~~~~ 193 (877)
T 3faw_A 122 WEFKDQLYAYSG---NLGAVLNQDGSKVEASLWSPSADSVTMIIYDKDNQN--RVVATTPLVK---NNKGVWQTILDTKL 193 (877)
T ss_dssp HHHHHHHHCCCS---CCEEEECTTSSCEEEEEECTTCSEEEEEEEETTEEE--EEEEEEECEE---CTTSEEEEEECGGG
T ss_pred CEEEHHHCCCCC---CCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCC--CCEEEECCCC---CCCCEEEEEECCCC
T ss_conf 065022227789---997779589988999999999998899998589876--6303662556---87998999978778
Q ss_pred C--CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-
Q ss_conf 9--9999629999839568999974589710038354331013456887999998887600003999999999999999-
Q 005552 157 G--DFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLK- 233 (691)
Q Consensus 157 g--~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f~W~~~~~~~- 233 (691)
| +++|++|+|+|++. ++.++++||||+++......... + ......|+|+++ ..|.|.+..|..
T Consensus 194 G~~~~~g~~Y~yrv~~~---------~~~~~~~DPYA~~~~~~~~~~~~-~---~~~~~~s~vvd~-~~~~~~~~~~~~~ 259 (877)
T 3faw_A 194 GIKNYTGYYYLYEIKRG---------KDKVKILDPYAKSLAEWDSNTVN-D---DIKTAKAAFVNP-SQLGPQNLSFAKI 259 (877)
T ss_dssp TCSCCTTCEEEEEEEET---------TEEEEECCTTCSCBCCCBGGGCC-S---SCCSCCEECCCG-GGSSCTTCCCCCC
T ss_pred CCCCCCCEEEEEEEEEC---------CCEEEECCCCCEECCCCCCCCCC-C---CCCCCCEEEECC-CCCCCCCCCCCCC
T ss_conf 87667880899999668---------96157238563112556843345-5---445786599643-0158776654567
Q ss_pred ---CCCCCCEEEEEEECCCCCCCCCCCC---CCCCHHCCCCCCCCC----------------------------------
Q ss_conf ---9998703999841574226999998---874320201112465----------------------------------
Q 005552 234 ---YPQRDLIIYEVHVRGFTRHESSKTE---HPGTYLGVVEKLDHL---------------------------------- 273 (691)
Q Consensus 234 ---~~~~~~iIYElhVr~Ft~~~~~~~~---~~Gtf~gi~ekLdyL---------------------------------- 273 (691)
.+|+++||||+|||+|+.+++.+.. .+|||+|++++||||
T Consensus 260 p~~~~~~~~vIYElhvr~ft~~~~~~~~~~~~~Gt~~gl~~~L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~ 339 (877)
T 3faw_A 260 ANFKGRQDAVIYEAHVRDFTSDQSLDGKLKNQLGTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSD 339 (877)
T ss_dssp TTCCSGGGCEEEEECTTGGGCCGGGTTTCSSCTTSHHHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSS
T ss_pred CCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 77788666589999764754899877545478879999999899999749998998551003443622234545556788
Q ss_pred -----------------------------------------------------------------CCCCCC---CCC---
Q ss_conf -----------------------------------------------------------------893103---668---
Q 005552 274 -----------------------------------------------------------------KGEFYN---YSG--- 282 (691)
Q Consensus 274 -----------------------------------------------------------------~g~y~~---~sg--- 282 (691)
...||. ..|
T Consensus 340 ~~ynwGY~~~~~~a~~~~yGt~p~~~~~~~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~ 419 (877)
T 3faw_A 340 NNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPR 419 (877)
T ss_dssp CSCCCSCSBSCSSSBCSTTCSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEE
T ss_conf 87765767676656465446787776217899999999998759989999961354576553567873024427999752
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf ---66867899999999999999999993560299992552012468654354225865456655689989993679997
Q 005552 283 ---CGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLI 359 (691)
Q Consensus 283 ---~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i 359 (691)
+++++|+++|+|+++|+++++||+++|||||||||+++++.. .+|..+ +.+..
T Consensus 420 ~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e~gVDGFRfD~a~~~~~--~~~~~~----------------------~~~~~ 475 (877)
T 3faw_A 420 ESFGGGRLGTTHAMSRRVLVDSIKYLTSEFKVDGFRFDMMGDHDA--AAIELA----------------------YKEAK 475 (877)
T ss_dssp EETTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBH--HHHHHH----------------------HHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCH--HHHHHH----------------------HHHHH
T ss_conf 157776556579899999999999999970876899956776998--999999----------------------99888
Q ss_pred HCCCCCCCCEEEEECCCCCC---CCCCCCCCCCCCCCEEC---CCCCHHHHHHHCCC-------------CCCHHHHHHH
Q ss_conf 42999887489940378898---64336788885341343---71008999978199-------------9928889999
Q 005552 360 SNDPILRGVKLIAEAWDTGG---LYQVGIFPHWGIWSEWN---GKYRDIVRQFIKGT-------------DGFAGAFAEC 420 (691)
Q Consensus 360 ~~dp~~~~~~liaE~w~~~~---~~~~~~fp~~~~~~~wn---~~f~~~~~~~~~g~-------------~~~~~~~~~~ 420 (691)
..+| ++++|||.|+.+. .++...++ ..+..|+ ..|++.+|++++|. ......+...
T Consensus 476 ~~~P---~~~ligE~Wd~~~g~~~~~~~~~~--~~~~~~~~~i~~f~d~iR~~~rg~~~~~~~~gf~~g~~~~l~~~~~~ 550 (877)
T 3faw_A 476 AINP---NMIMIGEGWRTFQGDQGKPVKPAD--QDWMKSTDTVGVFSDDIRNSLKSGFPNEGTPAFITGGPQSLQGIFKN 550 (877)
T ss_dssp HHCT---TCEEEECCCSCCCCBTTBCCCBSS--GGGGGGCSSEEEECHHHHHHHHCCTTCTTCCCGGGTCCEEHHHHHHH
T ss_pred HHCC---CCEEEECCCCCCCCCCCCCCCCCC--HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHH
T ss_conf 4488---818997444556664432123664--33442377520456779998716654335302320770789999998
Q ss_pred HCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 81998642599999986177753389986444663012342126999999999987776688883023899999999999
Q 005552 421 LCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMR 500 (691)
Q Consensus 421 l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k 500 (691)
+.+++..|. ...|..+|||++|||++|++|+++++.|+|..+++ ....++.+
T Consensus 551 l~~~~~~~~--~~~P~~sVnFV~nHD~~tl~Dlls~~~k~n~~~~~--------------------------~~~~~r~~ 602 (877)
T 3faw_A 551 IKAQPGNFE--ADSPGDVVQYIAAHDNLTLHDVIAKSINKDPKVAE--------------------------EDIHRRLR 602 (877)
T ss_dssp HTTCCSSSC--CSSGGGEEECSCCSSSSCHHHHHHHHHTCCHHHHH--------------------------HHHHHHHH
T ss_pred HHCCCCCCC--CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCH--------------------------HHHHHHHH
T ss_conf 644831124--57864202342124641477662233147866677--------------------------99999999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC------------------------------CCCCCCCCCCCCCC--
Q ss_conf 9999998608931681577655678999997778------------------------------99865336476223--
Q 005552 501 NFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCH------------------------------DNDINYFRWDKKEE-- 548 (691)
Q Consensus 501 ~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~------------------------------~~~~~~~~W~~~~~-- 548 (691)
++++++|++||+||||+|||+|+++.+++|.||+ ++.+++++|+..+.
T Consensus 603 lA~alllls~GiP~i~~GdE~grs~~gnnn~Ycq~~~~D~~p~k~~~~d~p~~~~~f~~nsy~s~d~in~~DW~~~~~~~ 682 (877)
T 3faw_A 603 LGNVMILTSQGTAFIHSGQEYGRTKRLLNPDYMTKVSDDKLPNKATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNN 682 (877)
T ss_dssp HHHHHHHTSSSEEEEETTTTTTCCCBCCCGGGSSCCCGGGCCTTEEECTTCSSSCEEESCCTTCCHHHHSCCHHHHHCTT
T ss_pred HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999985688031446344406667875322344433344432111244333343345665776643223554222333
Q ss_pred ---CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf ---310699999999999975745899998887-6337626799998888999499999982678979999949998589
Q 005552 549 ---SKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVI 624 (691)
Q Consensus 549 ---~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~~~~~~~~~~~~~vlaf~R~~~~~~~llVv~N~s~~~~~ 624 (691)
...++++|+++||+||+++|+|+.+++..+ ..+.|+... ..+.+...+.+++|.+....++.++|++|++.++++
T Consensus 683 ~~~~~~~l~~~~k~Li~lRk~~palr~~~~~~i~~~v~~~~~~-~~~~~~~~~~vlay~~~~~~~~~~lVv~N~~~~~~~ 761 (877)
T 3faw_A 683 KHPISTKTQAYTAGLITLRRSTDAFRKLSKAEIDREVSLITEV-GQGDIKEKDLVIAYQTIDSKGDIYAVFVNADSKARN 761 (877)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHCEESSCT-TSTTCCSEESEEEEEEECTTCCEEEEEEECSSSCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCEEEECCC-CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEE
T ss_conf 4443078999999999998659564277657626735997589-987767678789999988999989999908998799
Q ss_pred EECCCCC--CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEECC
Q ss_conf 9769999--99639991389999888768998136887642088787832885078599997469
Q 005552 625 ISLPKRP--GYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP 687 (691)
Q Consensus 625 v~lp~~~--g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~~~ 687 (691)
+.||..+ ...|.+++++......+...... .. .....++|+|+|++||+...
T Consensus 762 ~~Lp~~~~~~~~w~vl~dt~~~~~~~~~~~~g----~~-------~~~~~v~L~P~sa~VL~~~~ 815 (877)
T 3faw_A 762 VLLGEKYKHLLKGQVIVDADQAGIKPISTPRG----VH-------FEKDSLLIDPLTAIVIKVGK 815 (877)
T ss_dssp EECHHHHGGGGGSEEEECSSCBSSSCCSSCSS----EE-------ECSSEEEECTTEEEEEEEC-
T ss_pred EECCCCCCCCCCEEEEECCCCCCCCCCCCCCC----CC-------CCCCEEEECCCEEEEEEECC
T ss_conf 98899756773379996788667654445555----32-------22787998884999999856
No 5
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=1.00 E-value=1 Score=572.45 Aligned_cols=512 Identities=21% Similarity=0.334 Sum_probs=357.9
Q ss_pred CCEEECC-CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 0111124-344433225798899970894994899997578985899956489966883124764555567889969999
Q 005552 76 ETAVIKK-PQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVF 154 (691)
Q Consensus 76 ~~~~~~~-~~~~~~~~~~g~~~~lGa~~~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~ 154 (691)
..+.|.. -.||..+.+.|.+.+|||++.++|++|+||||+|++|+|+|+++++|.. ..++|.. ...+|||+++
T Consensus 274 ~~~~v~~~~~~d~~~~~~g~~~~lGa~~~~~gv~F~vwAP~A~~V~L~l~d~~~~~~----~~~~m~~--~~~~GvW~~~ 347 (1083)
T 2fhf_A 274 SATQVQTAGVLDDTYAAAAEALSYGAQLTDSGVTFRVWAPTAQQVELVIYSADKKVI----ASHPMTR--DSASGAWSWQ 347 (1083)
T ss_dssp EEEEEECHHHHHHHHHHHHHTSCCEEEEETTEEEEEEECTTCSEEEEEEECTTCCEE----EEEECEE--CTTTCEEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCCC----CEEECEE--CCCCCEEEEE
T ss_conf 434430353013333578875786029979928999999999989999982799865----1387828--7999889999
Q ss_pred ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCC----CCCCCCCCCC
Q ss_conf 839999962999983956899997458971003835433101345688799999888760000399----9999999999
Q 005552 155 LKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTP----EDEFDWEGDL 230 (691)
Q Consensus 155 i~g~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~f~W~~~~ 230 (691)
|+++.+|++|+|+|+ .+.|..|++ +.++++||||+++..+..++ ++++. ..++.|....
T Consensus 348 v~~~~~G~~Y~y~v~-~~~p~~g~~--~~~~~~DPYa~~~~~~~~~s--------------~v~d~~~~~~~p~~W~~~~ 410 (1083)
T 2fhf_A 348 GGSDLKGAFYRYAMT-VYHPQSRKV--EQYEVTDPYAHSLSTNSEYS--------------QVVDLNDSALKPEGWDGLT 410 (1083)
T ss_dssp ECGGGTTCEEEEEEE-EEETTTTEE--EEEEECCTTCSCBCGGGSSE--------------ECBCTTCGGGSCTTGGGCC
T ss_pred ECCCCCCCEEEEEEE-EECCCCCCC--CCCEECCCCCCEECCCCCCC--------------EEECCCCCCCCCCCCCCCC
T ss_conf 788999998999998-633778842--56153387411025687764--------------5744632446870010256
Q ss_pred CC--CCCCCCC---EEEEEEECCCCCCCCCCC-CCCCCHHCCCCC-------CCCC--------------C---------
Q ss_conf 99--9999870---399984157422699999-887432020111-------2465--------------8---------
Q 005552 231 PL--KYPQRDL---IIYEVHVRGFTRHESSKT-EHPGTYLGVVEK-------LDHL--------------K--------- 274 (691)
Q Consensus 231 ~~--~~~~~~~---iIYElhVr~Ft~~~~~~~-~~~Gtf~gi~ek-------LdyL--------------~--------- 274 (691)
.| ..+|+++ ||||+|||+|+.+..++. .++|||+|++++ |+|| +
T Consensus 411 ~p~~~~~~~~~~~~vIYE~hvr~ft~~~~~~~~~~~Gt~~g~~e~~~~~i~~L~~L~~lGvt~i~LlPv~~~~~v~e~~~ 490 (1083)
T 2fhf_A 411 MPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSD 490 (1083)
T ss_dssp CSSCCSSHHHHHTCEEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEEESCCEEESSSCCCGG
T ss_pred CCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
T ss_conf 76445651014565799981023208899988578978655322104367889999866988799898541455455532
Q ss_pred --------------------------------------------------------------C-----------------
Q ss_conf --------------------------------------------------------------9-----------------
Q 005552 275 --------------------------------------------------------------G----------------- 275 (691)
Q Consensus 275 --------------------------------------------------------------g----------------- 275 (691)
+
T Consensus 491 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~y~~~~d~~nwGYd~~~y~a~~~~ 570 (1083)
T 2fhf_A 491 KVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGS 570 (1083)
T ss_dssp GCCCTTSBHHHHHHHCHHHHTSTTGGGTTSSCBHHHHHHHHSTTCBTTBCHHHHHHHHHTTSSSCCCCCCEEEEEEECST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 22233564210012342111222222233322100111013655410001122221011356777778886767776842
Q ss_pred -------------------------------------------------------CCC-----------CCCCCCCCCCC
Q ss_conf -------------------------------------------------------310-----------36686686789
Q 005552 276 -------------------------------------------------------EFY-----------NYSGCGNTFNC 289 (691)
Q Consensus 276 -------------------------------------------------------~y~-----------~~sg~g~dln~ 289 (691)
.|| ++++|+ ++|+
T Consensus 571 yGt~p~~~~r~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~-dln~ 649 (1083)
T 2fhf_A 571 YATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCS-DSAP 649 (1083)
T ss_dssp TSSCCSTTHHHHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSE-EBCT
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCEECCCCCC-CCCC
T ss_conf 237987665399999999998762397899984245576777632000246788872363587789540577657-7675
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 99999999999999999935602999925520124686543542258654566556899899936799974299988748
Q 005552 290 NHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVK 369 (691)
Q Consensus 290 ~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~dp~~~~~~ 369 (691)
+||+||++|+++++||+++|||||||||++.++... +|.. +.+.+.+ +.++++
T Consensus 650 ~~p~Vr~~i~d~l~~W~~e~gVDGfR~D~a~~~~~~--~~~~-----------------------~~~~l~~--~~p~~~ 702 (1083)
T 2fhf_A 650 EHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKA--QILS-----------------------AWERIKA--LNPDIY 702 (1083)
T ss_dssp TSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHH--HHHH-----------------------HHHHHHT--TCTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH--HHHH-----------------------HHHHHHH--HCCCEE
T ss_conf 999999999999999999729758999670238999--9999-----------------------9999997--688849
Q ss_pred EEEECCCCCCC------CCCCCCCCCCCCCEECCCCCHHHHH---HHCCC-----CCC---------------HHHH---
Q ss_conf 99403788986------4336788885341343710089999---78199-----992---------------8889---
Q 005552 370 LIAEAWDTGGL------YQVGIFPHWGIWSEWNGKYRDIVRQ---FIKGT-----DGF---------------AGAF--- 417 (691)
Q Consensus 370 liaE~w~~~~~------~~~~~fp~~~~~~~wn~~f~~~~~~---~~~g~-----~~~---------------~~~~--- 417 (691)
+|||.|+.+.. ++...+. ..++.||+.|++.++. |+.++ .++ ...+
T Consensus 703 ligE~w~~~~~~~~~~a~q~~~~g--~~ig~fnd~~Rd~vr~~~~F~~g~~l~~~~gf~~G~~~~p~~~~~~~a~rl~~~ 780 (1083)
T 2fhf_A 703 FFGEGWDSNQSDRFEIASQINLKG--TGIGTFSDRLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHL 780 (1083)
T ss_dssp EEECCCCCSCTTTSCBCCTTTTTT--SSCEEECHHHHHHHHCSCTTCCTTHHHHCCCGGGTTTTSCCSSCCCCHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHCCC--CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCH
T ss_conf 997103576543123444540368--734556499999974667654555422233311112135553107888875120
Q ss_pred ----HHHHCCC-----------------CCCCCCC----CCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf ----9998199-----------------8642599----99998617775338998644466301234212699999999
Q 005552 418 ----AECLCGS-----------------PNLYQGG----GRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGE 472 (691)
Q Consensus 418 ----~~~l~gs-----------------~~~~~~~----~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~ 472 (691)
...+.+. ...|... .+.|...+||++|||++||+|+++++.+.. .
T Consensus 781 ~d~~~~~~~g~l~~f~~~~~~g~~l~gs~~~y~~~~~~~~~~p~~~infl~nHD~~rL~D~vs~~~~~~----~------ 850 (1083)
T 2fhf_A 781 ADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQE----A------ 850 (1083)
T ss_dssp HHHHHHHHTTCBTTCEEECTTSCEEEGGGSEETTEESCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTT----C------
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCC----C------
T ss_conf 455554200012221100233200124133313342111368112146431678661645544306775----3------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----
Q ss_conf 9987776688883023899999999999999999860893168157765567899999777899865336476223----
Q 005552 473 THNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEE---- 548 (691)
Q Consensus 473 ~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~---- 548 (691)
+...+.+++|++++++|++||+||||||||+|+++.+++|+||+++.+++|+|+..+.
T Consensus 851 ------------------~~~~r~r~~kla~alLlts~GiP~IY~GdEiG~t~~gn~n~Y~~~d~~n~~dW~~~dN~ws~ 912 (1083)
T 2fhf_A 851 ------------------DLDTRVRMQAVSLATVMLGQGIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNV 912 (1083)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCTTCSCCTTSHHHHHCCCTTCSCCSCSS
T ss_pred ------------------CHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ------------------36899999999999998778972998303207767866685246432355666656765544
Q ss_pred ----------------------------CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCCCCCCCCCCCE
Q ss_conf ----------------------------310699999999999975745899998887-633762679999888899949
Q 005552 549 ----------------------------SKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWHGHAPGLPDWSDKSRF 599 (691)
Q Consensus 549 ----------------------------~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~~~~~~~~~~~~~v 599 (691)
+..++++|||+||+|||++|+|+.+.+..+ +.+.|+.... .....+
T Consensus 913 g~p~~~~~~~~W~~~~~~~~~nv~~q~~d~~sl~~f~r~LI~LRk~~paLr~g~~~~i~~~v~~~~~~~-----~~~~~v 987 (1083)
T 2fhf_A 913 GMPRSSDDGSNYDIIARVKDAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGA-----DQQTGL 987 (1083)
T ss_dssp SCCCHHHHGGGHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHHHHTSCGGGGCCCHHHHHHHEEEESCST-----TCCTTE
T ss_pred CCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEEECCCC-----CCCCCE
T ss_conf 566444555781111543344311120389999999999999986297750786432363389956898-----778988
Q ss_pred EEEEEECC---------CCCEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 99999826---------789799999499985899769999996399913899998887689981368876420887878
Q 005552 600 VAFTLIDS---------VKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDA 670 (691)
Q Consensus 600 laf~R~~~---------~~~~llVv~N~s~~~~~v~lp~~~g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (691)
++|.|..+ .++.++|++|++++++++.||...+.+|..++++... +....... ....
T Consensus 988 laf~R~~~~~~~~~~d~~~~~llVv~N~s~~~~~~~Lp~~~~~~~~~l~~~~~~---~~~~~~~~-----------~~~~ 1053 (1083)
T 2fhf_A 988 LVMTIDDGMQAGASLDSRVDGIVVAINAAPESRTLQDFAGTSLQLSAIQQAAGD---RSLASGVQ-----------VAAD 1053 (1083)
T ss_dssp EEEEEECSTTTSSCSCTTEEEEEEEEECSSSCEEECTTSSSCCEECHHHHHTGG---GSTTTTCE-----------ECTT
T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCC---CCCCCCCE-----------ECCC
T ss_conf 999984787655455788987999991899877887678888279998637886---53345531-----------0358
Q ss_pred CEEEEECCEEEEEEECC
Q ss_conf 32885078599997469
Q 005552 671 NLYPMLSYSSIILLLSP 687 (691)
Q Consensus 671 ~~~~l~p~s~~vl~~~~ 687 (691)
..++|||+|++||+..+
T Consensus 1054 ~~l~Lpp~S~~Vl~~~~ 1070 (1083)
T 2fhf_A 1054 GSVTLPAWSVAVLELPQ 1070 (1083)
T ss_dssp SCEEECTTEEEEEEEEC
T ss_pred CEEEECCCEEEEEEECC
T ss_conf 86998999999999857
No 6
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=1.00 E-value=1 Score=568.70 Aligned_cols=486 Identities=25% Similarity=0.461 Sum_probs=362.7
Q ss_pred EECCCCCCC-CCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECC
Q ss_conf 112434443-3225798899970894994899997578985899956489966883124764555567889969999839
Q 005552 79 VIKKPQSQR-FQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKG 157 (691)
Q Consensus 79 ~~~~~~~~~-~~~~~g~~~~lGa~~~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g 157 (691)
|+....|+. .+.+.|. ||||++..+|++|+||||+|++|+|++++ +|+ ..+...++|.+ ..+|+|+++|++
T Consensus 300 ~~~~~~~d~~~~~y~g~--~lGa~~~~~gv~F~vwaP~A~~V~l~lf~--~~~-~~~~~~~~m~~---~~~gvW~~~v~~ 371 (921)
T 2wan_A 300 ILPRNVLNLPRYDYSGN--DLGNVYSKDATSFRVWAPTASNVQLLLYN--SEK-GSITKQLEMQK---SDNGTWKLQVSG 371 (921)
T ss_dssp CEECGGGGSGGGCCCCS--CCEEEECSSEEEEEEECTTCSEEEEEEES--SSS-SCCSEEEECEE---CGGGEEEEEEES
T ss_pred EEEHHHCCCCCCCCCCC--CCEEEEECCEEEEEEECCCCCEEEEEEEE--CCC-CCCCEEEECEE---CCCCEEEEEECC
T ss_conf 46310125443566488--85049979969999999999888999982--898-87576895862---899889999826
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCC--CCCCCCCCCCCCCC-
Q ss_conf 999962999983956899997458971003835433101345688799999888760000399--99999999999999-
Q 005552 158 DFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTP--EDEFDWEGDLPLKY- 234 (691)
Q Consensus 158 ~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~f~W~~~~~~~~- 234 (691)
+.+|.+|+|+|++. | +...++||||+++..++. .++|++. ..+++|+.+..|..
T Consensus 372 ~~~g~~Y~y~v~~~-----g----~~~~~~DPya~~~~~~~~--------------~s~v~d~~~~~~~~W~~~~~p~~~ 428 (921)
T 2wan_A 372 NLENWYYLYQVTVN-----G----TTQTAVDPYARAISVNAT--------------RGMIVDLKATDPAGWQGDHEQTPA 428 (921)
T ss_dssp CCTTCEEEEEEECS-----S----CEEEECCTTCSSBSGGGS--------------SEECCCGGGGSCTTGGGCCCCCCS
T ss_pred CCCCCEEEEEEEEC-----C----EEEEECCCCCEEECCCCC--------------CEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 88998899999949-----9----679955875201025898--------------569975632685323224588889
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCC-----------CCCC------------------------------
Q ss_conf 99870399984157422699999887432020111-----------2465------------------------------
Q 005552 235 PQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEK-----------LDHL------------------------------ 273 (691)
Q Consensus 235 ~~~~~iIYElhVr~Ft~~~~~~~~~~Gtf~gi~ek-----------LdyL------------------------------ 273 (691)
.++++||||+|||+|+.+++++...+|+|+|++++ ||||
T Consensus 429 ~~~~~vIYEihv~~F~~~~~~g~~~~Gt~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wG 508 (921)
T 2wan_A 429 NPVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTKGPDHVKTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWG 508 (921)
T ss_dssp SGGGCCEEEECHHHHHCSTTSCCSSTTSGGGGGCCSCBCGGGCBCHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCC
T ss_pred CCHHCEEEEEECCCCCCCCCCCCCCCCCEEHEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 81134899997381007999997888871011134655532310133799976998899698520676553466767768
Q ss_pred ---------------------------------------------------CC---------CCC----------CCCCC
Q ss_conf ---------------------------------------------------89---------310----------36686
Q 005552 274 ---------------------------------------------------KG---------EFY----------NYSGC 283 (691)
Q Consensus 274 ---------------------------------------------------~g---------~y~----------~~sg~ 283 (691)
.+ .|| ++++|
T Consensus 509 Yd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~ 588 (921)
T 2wan_A 509 YDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGC 588 (921)
T ss_dssp CSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 98767788773224488888549999999999987699899998566556644311027788737875899863478875
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-C
Q ss_conf 686789999999999999999999356029999255201246865435422586545665568998999367999742-9
Q 005552 284 GNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISN-D 362 (691)
Q Consensus 284 g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~-d 362 (691)
+++||++||+||++|+++++||++||||||||||++.++..+ +|+. +.+.+.+ +
T Consensus 589 ~~dln~~~p~Vr~~i~d~l~~Wl~e~gVDGfR~Da~~~~~~~--~~~~-----------------------~~~~l~~~~ 643 (921)
T 2wan_A 589 GNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMALLGKD--TMAK-----------------------ISNELHAIN 643 (921)
T ss_dssp SCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGGCHH--HHHH-----------------------HHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH--HHHH-----------------------HHHHHHHHC
T ss_conf 662143899999999999999999829887995054436899--9999-----------------------999999769
Q ss_pred CCCCCCEEEEECCCCCC--CCCCC---CCCCCCC-CCEECCCCCHHHHH---------HHCCCCCCHHHHHHHHCCCCCC
Q ss_conf 99887489940378898--64336---7888853-41343710089999---------7819999288899998199864
Q 005552 363 PILRGVKLIAEAWDTGG--LYQVG---IFPHWGI-WSEWNGKYRDIVRQ---------FIKGTDGFAGAFAECLCGSPNL 427 (691)
Q Consensus 363 p~~~~~~liaE~w~~~~--~~~~~---~fp~~~~-~~~wn~~f~~~~~~---------~~~g~~~~~~~~~~~l~gs~~~ 427 (691)
| ++++|||.|+.+. +.... .....++ ++.||+.|++.++. ++.|.......+...+.++...
T Consensus 644 p---~~~ligE~w~~~~~~~~~~~~~~~~~~~gf~~~~~nd~~rd~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~~~~~~ 720 (921)
T 2wan_A 644 P---GIVLYGEPWTGGTSGLSSDQLVTKGQQKGLGIGVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQD 720 (921)
T ss_dssp T---TCEEEECSSCSSCCSSCTTTSCCTTTTTTTTCEEECHHHHHHHHCCTTCTTCCCTTTTCSSCHHHHHHHHBTTTTT
T ss_pred C---CEEEEEECCCCCCCCCCCCHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHH
T ss_conf 9---6389984236777543210000225567998388560899987420344444044507832799999988506112
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25999999861777533899864446630123421269999999999877766888830238999999999999999998
Q 005552 428 YQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLM 507 (691)
Q Consensus 428 ~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~ll 507 (691)
|. ..|..++||++|||+.|+.+++.+..+. + . ...+.+++|++++++|
T Consensus 721 ~~---~~p~~~vnfv~nHD~~rl~d~l~~~~~~-----~-------------------~-----~~~~~~~~rla~a~ll 768 (921)
T 2wan_A 721 FT---SAPSETINYVTSHDNMTLWDKILASNPS-----D-------------------T-----EADRIKMDELAHAVVF 768 (921)
T ss_dssp TC---SSGGGEEECSCCSSSCCHHHHHHHHCTT-----S-------------------C-----HHHHHHHHHHHHHHHH
T ss_pred CC---CCCCEEEEEEECCCCCCHHHHHHHHCCC-----C-------------------C-----HHHHHHHHHHHHHHHH
T ss_conf 05---5844068863036775277776643789-----8-------------------8-----9999999999999998
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCC
Q ss_conf 60893168157765567899999777899865336476223310699999999999975745899998887-63376267
Q 005552 508 VSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWHGH 586 (691)
Q Consensus 508 t~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~ 586 (691)
++||+||||||||+|+++.+++++||+++.+++++|+..+.. .++++|+|+||+||+++|+|+.+.+..+ ..+.|..
T Consensus 769 t~pG~P~iy~GdE~g~~~~g~~n~y~~~d~~~~~~W~~~~~~-~~l~~~~~~Li~lRk~~paL~~g~~~~i~~~~~~~~- 846 (921)
T 2wan_A 769 TSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDWSRKAQF-KDVFDYFSSMIHLRNQHPAFRMTTADQIKQNLTFLE- 846 (921)
T ss_dssp HSBSEEEEETTGGGTCCCTTCSCCTTCCHHHHSCCTHHHHHT-HHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEECC-
T ss_pred HCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCEEEEC-
T ss_conf 779985898552004567898766578654443577653222-599999999999986396650785444156169962-
Q ss_pred CCCCCCCCCCCCEEEEEEECC----CCCEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 999988889994999999826----7897999994999858997699999963999138999988876899813688764
Q 005552 587 APGLPDWSDKSRFVAFTLIDS----VKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIK 662 (691)
Q Consensus 587 ~~~~~~~~~~~~vlaf~R~~~----~~~~llVv~N~s~~~~~v~lp~~~g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~ 662 (691)
..+.+++|.|... .++.++|++|++.+++++.||. +.|+.+++++.....+. .
T Consensus 847 --------~~~~vlaf~r~~~~~~~~~~~~lVv~N~~~~~~~~~Lp~---g~w~~~~~~~~~~~~~~-----~------- 903 (921)
T 2wan_A 847 --------SPTNTVAFELKNYANHDTWKNIIVMYNPNKTSQTLNLPS---GDWTIVGLGDQIGEKSL-----G------- 903 (921)
T ss_dssp --------CCTTCEEEEECSSGGGCSSSCEEEEEECSSSCEEEECCS---SCEEEEEETTEESSSCS-----C-------
T ss_pred --------CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCC---CCEEEEECCCCCCCCCC-----C-------
T ss_conf --------899699999965778878986999998989877998799---80799973887776664-----4-------
Q ss_pred HCCCCCCCCEEEEECCEEEEEEE
Q ss_conf 20887878328850785999974
Q 005552 663 QYAPFLDANLYPMLSYSSIILLL 685 (691)
Q Consensus 663 ~~~~~~~~~~~~l~p~s~~vl~~ 685 (691)
.....++|||+|++||++
T Consensus 904 -----~~~g~~~l~p~s~~Vl~~ 921 (921)
T 2wan_A 904 -----HVMGNVQVPAISTLILKQ 921 (921)
T ss_dssp -----EECSEEEECSSEEEEEEC
T ss_pred -----CCCCEEEECCCEEEEEEC
T ss_conf -----448669989889999979
No 7
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=1.00 E-value=1 Score=562.51 Aligned_cols=485 Identities=27% Similarity=0.400 Sum_probs=362.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCC
Q ss_conf 11243444332257988999708949948999975789858999564899668831247645555678899699998399
Q 005552 79 VIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGD 158 (691)
Q Consensus 79 ~~~~~~~~~~~~~~g~~~~lGa~~~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g~ 158 (691)
+++...|+..+.+.| +|||++.++|++|+||||+|++|+|++++ ++|. ...++|.+ ..+|+|+++|+++
T Consensus 90 ~~~~~~~d~~~~y~~---~lGa~~~~~~~~f~vwap~a~~V~l~~~~-~~~~----~~~~~m~~---~~~g~w~~~v~~~ 158 (718)
T 2e8y_A 90 VIRTAAFDDEFYYDG---ELGAVYTADHTVFKVWAPAATSAAVKLSH-PNKS----GRTFQMTR---LEKGVYAVTVTGD 158 (718)
T ss_dssp GGGSHHHHHHHCCCS---CCEEEECSSEEEEEEECTTCSEEEEEEEC-TTSC----CEEEECEE---CGGGEEEEEEESC
T ss_pred EECCCCCHHHCCCCC---CCCCEEECCCEEEEEECCCCCEEEEEEEC-CCCC----CEEEECCC---CCCCEEEEEECCC
T ss_conf 103410022215578---99978868948999999999899999990-8985----55885834---9999899997889
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99962999983956899997458971003835433101345688799999888760000399999999999999999987
Q 005552 159 FKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRD 238 (691)
Q Consensus 159 ~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f~W~~~~~~~~~~~~ 238 (691)
.+|.+|+|+|++. | ....++||||+++..++. .++|++ .+.|.|.+-.++..++++
T Consensus 159 ~~g~~Y~f~v~~~-----g----~~~~~~DPya~~~~~~~~--------------~s~v~d-~~~~~~~~w~~~~~~~~~ 214 (718)
T 2e8y_A 159 LHGYEYLFCICNN-----S----EWMETVDQYAKAVTVNGE--------------KGVVLR-PDQMKWTAPLKPFSHPVD 214 (718)
T ss_dssp CTTCEEEEEEEET-----T----EEEEECCTTCSSBCGGGC--------------SEECCC-CCCCCCCCCCCCCSCGGG
T ss_pred CCCCEEEEEEEEC-----C----EEEEECCCCCCCCCCCCC--------------CCEEEC-CCCCCCCCCCCCCCCHHH
T ss_conf 9997189999969-----9----578854876251145898--------------446976-311587566777788035
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCHHCCCC-----------CCCCC----------------------------------
Q ss_conf 039998415742269999988743202011-----------12465----------------------------------
Q 005552 239 LIIYEVHVRGFTRHESSKTEHPGTYLGVVE-----------KLDHL---------------------------------- 273 (691)
Q Consensus 239 ~iIYElhVr~Ft~~~~~~~~~~Gtf~gi~e-----------kLdyL---------------------------------- 273 (691)
+||||+|||+|+.+++++...+|||.|+++ +||||
T Consensus 215 ~viYei~v~~F~~~~~~g~~~~G~~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~ 294 (718)
T 2e8y_A 215 AVIYETHLRDFSIHENSGMINKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNP 294 (718)
T ss_dssp CCEEEECHHHHHHSTTSCCSSTTSGGGGGCTTCBCTTSCBCHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSE
T ss_pred CEEEEEEHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 68999855785479988978898710000036565434023548999769888997872226764445665667678786
Q ss_pred -------------------------------------------------C----------CCCC---------CCCCCCC
Q ss_conf -------------------------------------------------8----------9310---------3668668
Q 005552 274 -------------------------------------------------K----------GEFY---------NYSGCGN 285 (691)
Q Consensus 274 -------------------------------------------------~----------g~y~---------~~sg~g~ 285 (691)
. +.|+ +.++||+
T Consensus 295 ~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~ 374 (718)
T 2e8y_A 295 LHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGN 374 (718)
T ss_dssp EEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEEEECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 67877484235687776544999999999999879999999952665676643201558870786189986347887566
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 67899999999999999999993560299992552012468654354225865456655689989993679997429998
Q 005552 286 TFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPIL 365 (691)
Q Consensus 286 dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~dp~~ 365 (691)
+||++||+||++|+++++||+++|||||||||++.++..+ +|+. +.+.+.. +.
T Consensus 375 dln~~np~Vr~~i~d~~~~Wl~e~gVDGfR~D~~~~~~~~--~~~~-----------------------~~~~~~~--~~ 427 (718)
T 2e8y_A 375 DIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGILDID--TVLY-----------------------MKEKATK--AK 427 (718)
T ss_dssp CBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHH--HHHH-----------------------HHHHHHH--HS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH--HHHH-----------------------HHHHHHH--HC
T ss_conf 4365999999999999999999819999999563438999--9999-----------------------9999987--58
Q ss_pred CCCEEEEECCCCCC-C--------CCCCCCCCCCCCCEECCCCCHHHHH---------HHCCCCCCHHHHHHHHCCCCCC
Q ss_conf 87489940378898-6--------4336788885341343710089999---------7819999288899998199864
Q 005552 366 RGVKLIAEAWDTGG-L--------YQVGIFPHWGIWSEWNGKYRDIVRQ---------FIKGTDGFAGAFAECLCGSPNL 427 (691)
Q Consensus 366 ~~~~liaE~w~~~~-~--------~~~~~fp~~~~~~~wn~~f~~~~~~---------~~~g~~~~~~~~~~~l~gs~~~ 427 (691)
+++++|||.|+.+. . ++.+.|+ .++.||+.|++.++. +..|.......+...+.++...
T Consensus 428 p~~~ligE~w~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~~~~~~ 504 (718)
T 2e8y_A 428 PGILLFGEGWDLATPLPHEQKAALANAPRMP---GIGFFNDMFRDAVKGNTFHLKATGFALGNGESAQAVMHGIAGSSGW 504 (718)
T ss_dssp TTCEEEECCCCCCCSSCGGGBCCGGGGGGCT---TCEEECHHHHHHHHCCSSSTTCCCGGGTCGGGHHHHHHHHBTTSCB
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCC---CEEEECHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCC
T ss_conf 9849998644777765432101324556898---2589770888876332355455630258731699999997557332
Q ss_pred CC--CCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25--9999998617775338998644466301234212699999999998777668888302389999999999999999
Q 005552 428 YQ--GGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLC 505 (691)
Q Consensus 428 ~~--~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~ 505 (691)
+. .....|...+||++|||+.|+.+++++..+. + ....+.+++|+++++
T Consensus 505 ~~~~~~~~~~~~~vnfv~nHD~~rl~~~~~~~~~~-----~------------------------~~~~~~~~~kla~a~ 555 (718)
T 2e8y_A 505 KALAPIVPEPSQSINYVESHDNHTFWDKMSFALPQ-----E------------------------NDSRKRSRQRLAVAI 555 (718)
T ss_dssp TTBCCSSSSGGGEEECSCCSSSSCHHHHHHHHCTT-----C------------------------CHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCC-----C------------------------CHHHHHHHHHHHHHH
T ss_conf 44553458940478988448886077663015888-----7------------------------889999999999999
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEEC
Q ss_conf 9860893168157765567899999777899865336476223310699999999999975745899998887-633762
Q 005552 506 LMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWH 584 (691)
Q Consensus 506 llt~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~ 584 (691)
+|++||+||||||||+|+++.+++++|++++.+++++|+..... .++++|||+||+|||++|+|+.|++..+ ..+.|.
T Consensus 556 ll~~~G~P~iy~GdE~g~~~~g~~~~y~~~d~~~~~~W~~~~~~-~~l~~~~~~Li~lRk~~pal~~g~~~~i~~~~~~~ 634 (718)
T 2e8y_A 556 ILLAQGVPFIHSGQEFFRTKQGVENSYQSSDSINQLDWDRRETF-KEDVHYIRRLISLRKAHPAFRLRSAADIQRHLECL 634 (718)
T ss_dssp HHTSBSEEEEETTGGGTCCCTTCSCCTTCCHHHHSCCHHHHHHT-HHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEEE
T ss_pred HHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCEEEE
T ss_conf 98778972776013117567898766589765464683313135-78999999999998519553168622212616993
Q ss_pred CCCCCCCCCCCCCCEEEEEEECC----CCCEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 67999988889994999999826----78979999949998589976999999639991389999888768998136887
Q 005552 585 GHAPGLPDWSDKSRFVAFTLIDS----VKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIA 660 (691)
Q Consensus 585 ~~~~~~~~~~~~~~vlaf~R~~~----~~~~llVv~N~s~~~~~v~lp~~~g~~w~~i~~s~~~~~~~~~~~~~~~~~~~ 660 (691)
. ..+.+++|.|... .++.++|++|++.+++++.||. ++.|+.++++..... . .
T Consensus 635 ~---------~~~~v~a~~r~~~~~~~~~~~~lVv~N~~~~~~~~~lp~--~g~~~~l~~~~~~~~--------~---~- 691 (718)
T 2e8y_A 635 T---------LKEHLIAYRLYDLDEVDEWKDIIVIHHASPDSVEWRLPN--DIPYRLLCDPSGFQE--------D---P- 691 (718)
T ss_dssp E---------ECSSEEEEEECCCTTTCSSSEEEEEEECSSSEEEEECSS--CSCEEEEEETTEEEE--------E---E-
T ss_pred C---------CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCC--CCCEEEEECCCCCCC--------C---C-
T ss_conf 2---------899799999946888889984999995898878998899--994899954887777--------6---5-
Q ss_pred HHHCCCCCCCCEEEEECCEEEEEEECC
Q ss_conf 642088787832885078599997469
Q 005552 661 IKQYAPFLDANLYPMLSYSSIILLLSP 687 (691)
Q Consensus 661 ~~~~~~~~~~~~~~l~p~s~~vl~~~~ 687 (691)
. .....++|+|+|++||+...
T Consensus 692 ---~---~~~~~~~l~p~s~~vl~~~~ 712 (718)
T 2e8y_A 692 ---T---EIKKTVAVNGIGTVILYLAS 712 (718)
T ss_dssp ---E---EECSEEEEESSEEEEEEECC
T ss_pred ---C---CCCCEEEECCCEEEEEEECC
T ss_conf ---6---77977998998999999887
No 8
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=1.00 E-value=1 Score=559.56 Aligned_cols=519 Identities=21% Similarity=0.356 Sum_probs=360.4
Q ss_pred CCCCCCCCCCCCCCCCEEEECCC--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECC----
Q ss_conf 44433225798899970894994--899997578985899956489966883124764555567889969999839----
Q 005552 84 QSQRFQVSKGYPTPFGATLRDGG--VNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKG---- 157 (691)
Q Consensus 84 ~~~~~~~~~g~~~~lGa~~~~~g--~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g---- 157 (691)
.+|..+.+.| +|||++..+| |+|+||||+|++|+|+|+++++|. .+..+++|.+ ..+|||+++|++
T Consensus 4 ~~d~~~~y~~---~lGa~~~~~g~gv~F~vwap~A~~V~l~l~~~~~~~--~~~~~~~m~~---~~~gvW~~~v~~~~~~ 75 (714)
T 2ya0_A 4 LKDETYSYDG---KLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPD--KVVGTVALEK---GERGTWKQTLDSTNKL 75 (714)
T ss_dssp HHHHHHCCCS---CCEEEEETTTTEEEEEEECTTCSEEEEEEECSSCTT--SEEEEEECEE---CGGGEEEEEECTTCSS
T ss_pred CCCCCCCCCC---CCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCC--CCCEEEECCC---CCCCEEEEEECCCCCC
T ss_conf 1342124799---988779689987999998998998999987479877--6515885704---8798899997775678
Q ss_pred ---CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC---
Q ss_conf ---99996299998395689999745897100383543310134568879999988876000039999999999999---
Q 005552 158 ---DFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLP--- 231 (691)
Q Consensus 158 ---~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f~W~~~~~--- 231 (691)
+++|++|+|+|++. ++.++++||||+++........ +.++..+...++|+++ ..+.|++..|
T Consensus 76 g~~~~~g~~Y~y~v~~~---------~~~~~~~DPya~~~~~~~~~~~--~~~~~~~~~~~~vvd~-~~~~~~~~~~~~~ 143 (714)
T 2ya0_A 76 GITDFTGYYYQYQIERQ---------GKTVLALDPYAKSLAAWNSDDS--KIDDAHKVAKAAFVDP-AKLGPQDLTYGKI 143 (714)
T ss_dssp SCSCCTTCEEEEEEEET---------TEEEEECCTTCSEECCCBGGGT--TSCGGGSSCCEECCCG-GGSSCTTCCCCCC
T ss_pred CCCCCCCCEEEEEEEEC---------CCEEEECCCCEEEECCCCHHCC--CCCCCCCCCCEEEECC-CCCCCCCCCCCCC
T ss_conf 85446883899999708---------9438854876133236760002--5676566776799765-1148654310136
Q ss_pred -CCCCCCCCEEEEEEECCCCCCCCCCCC---CCCCHHCCCCCCCCC--------------C-------------------
Q ss_conf -999998703999841574226999998---874320201112465--------------8-------------------
Q 005552 232 -LKYPQRDLIIYEVHVRGFTRHESSKTE---HPGTYLGVVEKLDHL--------------K------------------- 274 (691)
Q Consensus 232 -~~~~~~~~iIYElhVr~Ft~~~~~~~~---~~Gtf~gi~ekLdyL--------------~------------------- 274 (691)
+..+++++||||+|||+|+.+++.+.. ..|||+|++++|||| +
T Consensus 144 ~~~~~~~~~viYE~hv~~f~~~~~~~~~~~~~~Gt~~gi~~~L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~ 223 (714)
T 2ya0_A 144 HNFKTREDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASS 223 (714)
T ss_dssp TTCSSGGGCCEEEECHHHHHCCGGGTTTCSSCTTSHHHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSS
T ss_pred CCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77778555689999705523698875323467768999998768999769987997884015556721011112223567
Q ss_pred -CCC---------C---------------------------------------------------------CC---CC--
Q ss_conf -931---------0---------------------------------------------------------36---68--
Q 005552 275 -GEF---------Y---------------------------------------------------------NY---SG-- 282 (691)
Q Consensus 275 -g~y---------~---------------------------------------------------------~~---sg-- 282 (691)
+.| | .+ .+
T Consensus 224 ~~~~~wGY~~~~~~a~~~~yg~~~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~ 303 (714)
T 2ya0_A 224 NSNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTP 303 (714)
T ss_dssp SCSCCCSCSBSCSSSBCSTTSSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCB
T ss_pred CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 67676677776675667322368877655699999999999987999999962574457643224688714785899987
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf ----6686789999999999999999999356029999255201246865435422586545665568998999367999
Q 005552 283 ----CGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDL 358 (691)
Q Consensus 283 ----~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 358 (691)
+++++|+++|+||++|+++++||++||||||||||+++++..+ +|..+ +.+.
T Consensus 304 ~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e~~vDGfR~D~~~~~~~~--~~~~~----------------------~~~~ 359 (714)
T 2ya0_A 304 RTSFGGGRLGTTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDHDAA--SIEEA----------------------YKAA 359 (714)
T ss_dssp CEETTEEBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHH--HHHHH----------------------HHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHH--HHHHH----------------------HHHH
T ss_conf 04668887565899999999999999998619319999687887889--99999----------------------9999
Q ss_pred HHCCCCCCCCEEEEECCCCCC---CCCCCCCCCCCCCCEE---CCCCCHHHHHHHCCC-------------CCCHHHHHH
Q ss_conf 742999887489940378898---6433678888534134---371008999978199-------------992888999
Q 005552 359 ISNDPILRGVKLIAEAWDTGG---LYQVGIFPHWGIWSEW---NGKYRDIVRQFIKGT-------------DGFAGAFAE 419 (691)
Q Consensus 359 i~~dp~~~~~~liaE~w~~~~---~~~~~~fp~~~~~~~w---n~~f~~~~~~~~~g~-------------~~~~~~~~~ 419 (691)
...+| ++++|||.|+... .+....++ ..|..| +..|.+.++.++++. ......+..
T Consensus 360 ~~~~p---~~~ligE~w~~~~g~~~~~~~~~~--~~~~~~~~~~~~f~d~~r~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 434 (714)
T 2ya0_A 360 RALNP---NLIMLGEGWRTYAGDENMPTKAAD--QDWMKHTDTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFK 434 (714)
T ss_dssp HHHCT---TCEEEECCCSCCCCSTTCCCCBSS--GGGGGGCSSSEEECHHHHHHHHCCSSSTTCCCTTTTCCEEHHHHHH
T ss_pred HHHCC---CEEEEECCCCCCCCCCCCCCCCCC--HHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHH
T ss_conf 98699---849993254344675422245540--5488659975530658999984657754541121177652999998
Q ss_pred HHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 98199864259999998617775338998644466301234212699999999998777668888302389999999999
Q 005552 420 CLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQM 499 (691)
Q Consensus 420 ~l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~ 499 (691)
.+.+++..|. ...|..+|||++|||+.|+.|++++..++|..+++.+ ....+++
T Consensus 435 ~l~~~~~~~~--~~~p~~~vnfv~nHD~~~l~d~~~~~~~~~~~~~~~~------------------------~~~~~~~ 488 (714)
T 2ya0_A 435 NLIAQPTNFE--ADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENY------------------------AEIHRRL 488 (714)
T ss_dssp HHTTCCTTSC--CSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHH------------------------HHHHHHH
T ss_pred HHHCCCCCCC--CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCH------------------------HHHHHHH
T ss_conf 7744865567--7898897549874798614444444314685431013------------------------9999999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC----------------------------------CCCCCCCCCCC
Q ss_conf 99999998608931681577655678999997778----------------------------------99865336476
Q 005552 500 RNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCH----------------------------------DNDINYFRWDK 545 (691)
Q Consensus 500 k~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~----------------------------------~~~~~~~~W~~ 545 (691)
|++++++|++||+||||||||+|+++.++++.||+ ++.+++++|+.
T Consensus 489 ~la~~lll~~~G~P~i~~GdE~g~~~~~~d~~~~~~~~~gr~~e~~~~~~~~~g~~f~~p~~~~d~~~~~~~~~~ldW~~ 568 (714)
T 2ya0_A 489 RLGNLMVLTAQGTPFIHSGQEYGRTKQFRNPAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTK 568 (714)
T ss_dssp HHHHHHHHHSSSEEEEETTTTTTCCCBCCCGGGSSCCCGGGCCTTEEEEECTTCCEEEEEEEESCCTTCCHHHHCCCHHH
T ss_pred HHHHHHHHHCCCCCEEEECHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 99999999779984798044432457888701320122234421112222113554334332346667887520103774
Q ss_pred CCC-----CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC
Q ss_conf 223-----310699999999999975745899998887-63376267999988889994999999826789799999499
Q 005552 546 KEE-----SKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNAS 619 (691)
Q Consensus 546 ~~~-----~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~~~~~~~~~~~~~vlaf~R~~~~~~~llVv~N~s 619 (691)
.+. .+.++++|||+||+|||++|+|+.+++..+ ..+.|+... +.+.+...+.+++|.|....++.++|++|++
T Consensus 569 ~~~~~~~~~~~~l~~~~~~Li~lRk~~p~l~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~V~~N~~ 647 (714)
T 2ya0_A 569 ATDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVHLITVP-GQNGVEKEDVVIGYQITAPNGDIYAVFVNAD 647 (714)
T ss_dssp HHCTTTCHHHHHHHHHHHHHHHHHHTCGGGGCSSHHHHHHHEEESSCT-TSTTCCSEESEEEEEEECTTSCEEEEEEECS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCEEEECCC-CCCCCCCCCCEEEEEEECCCCCEEEEEECCC
T ss_conf 223343411489999999999998519021377524416756997889-9987777785899998379999899998998
Q ss_pred CCCEEEECCCCC--CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCC
Q ss_conf 985899769999--9963999138999988876899813688764208878783288507859999746999
Q 005552 620 HLPVIISLPKRP--GYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDE 689 (691)
Q Consensus 620 ~~~~~v~lp~~~--g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~~~~~ 689 (691)
.+++++.||... ...|.+++++.......+..... . ......++|||+|++||+.+.+.
T Consensus 648 ~~~~~~~lp~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~-------~~~~~~~~l~~~s~~vl~~~~~~ 708 (714)
T 2ya0_A 648 EKAREFNLGTAFAHLRNAEVLADENQAGPVGIANPKG----L-------EWTEKGLKLNALTATVLRVSQNG 708 (714)
T ss_dssp SSCEEEECTTTTGGGGGCEEEECSSCBCSSCCSSCSS----E-------EECSSEEEECTTEEEEEEECGGG
T ss_pred CCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC----C-------CCCCCEEEECCCEEEEEEECCCC
T ss_conf 7867998999766786669998489888653334555----3-------34698799847899999987879
No 9
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=1.00 E-value=1 Score=555.28 Aligned_cols=516 Identities=22% Similarity=0.362 Sum_probs=356.6
Q ss_pred CCCCCCCCCCCCCCCEEEECCC--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECC-----
Q ss_conf 4433225798899970894994--899997578985899956489966883124764555567889969999839-----
Q 005552 85 SQRFQVSKGYPTPFGATLRDGG--VNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKG----- 157 (691)
Q Consensus 85 ~~~~~~~~g~~~~lGa~~~~~g--~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gvW~~~i~g----- 157 (691)
++..+.+.| +|||++..+| ++|+||||+|++|+|||+++++|. ++..+++|.+ ..+|+|+++|++
T Consensus 312 ~d~~~~y~~---~lGa~~~~~g~gv~F~vwAP~A~~V~L~l~d~~~~~--~~~~~~~m~~---~~~gvW~~~v~~~~~~g 383 (1014)
T 2ya1_A 312 KDETYSYDG---KLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPD--KVVGTVALEK---GERGTWKQTLDSTNKLG 383 (1014)
T ss_dssp HHHHHCCCS---CCEEEEEGGGTEEEEEEECTTCSEEEEEEECSSCTT--SEEEEEECEE---CGGGEEEEEECTTCSSC
T ss_pred CCCCCCCCC---CCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCC--CCCEEEECCC---CCCCEEEEEECCCCCCC
T ss_conf 321136789---855579689978999999999998999998789877--6524773624---88988999975645688
Q ss_pred --CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC----
Q ss_conf --99996299998395689999745897100383543310134568879999988876000039999999999999----
Q 005552 158 --DFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLP---- 231 (691)
Q Consensus 158 --~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f~W~~~~~---- 231 (691)
+++|++|+|+|++. ++.++++||||+++........ +.+...+...++|+++ ..+.|++..|
T Consensus 384 ~~~~~G~~Y~y~i~~~---------~~~~~~~DPYa~~~~~~~~~~~--~~~~~~~~~~s~vvd~-~~~~~~~~~~~~~~ 451 (1014)
T 2ya1_A 384 ITDFTGYYYQYQIERQ---------GKTVLALDPYAKSLAAWNSDDS--KIDDAHKVAKAAFVDP-AKLGPQDLTYGKIH 451 (1014)
T ss_dssp CSCCTTCEEEEEEEET---------TEEEEECCTTCSSBCCCBGGGT--TSCGGGSSCCEECCCG-GGSSCTTCCCCCCT
T ss_pred CCCCCCCEEEEEEEEC---------CEEEEECCCCCEECCCCCCCCC--CCCCCCCCCCEEEECC-HHCCCCCCCCCCCC
T ss_conf 5445786789999809---------8079963855042145553223--5666677642899772-21387654223476
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCC---CCCCHHCCCCCCCCC--------------C--------------------
Q ss_conf 999998703999841574226999998---874320201112465--------------8--------------------
Q 005552 232 LKYPQRDLIIYEVHVRGFTRHESSKTE---HPGTYLGVVEKLDHL--------------K-------------------- 274 (691)
Q Consensus 232 ~~~~~~~~iIYElhVr~Ft~~~~~~~~---~~Gtf~gi~ekLdyL--------------~-------------------- 274 (691)
+..+++++||||+|||+|+.+++.+.. ..|||+|++++|||| +
T Consensus 452 ~~~~~~~~vIYE~hv~~ft~~~~~~~~~~~~~Gt~~gl~~~LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~~~~y~~~~ 531 (1014)
T 2ya1_A 452 NFKTREDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSN 531 (1014)
T ss_dssp TCSSGGGCCEEEECHHHHHCCGGGTTTCSSCTTSHHHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSS
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66675555799995687778987663234778599999987689997699849943722045556211222223234576
Q ss_pred CCC---------C---------------------------------------------------------CC---CC---
Q ss_conf 931---------0---------------------------------------------------------36---68---
Q 005552 275 GEF---------Y---------------------------------------------------------NY---SG--- 282 (691)
Q Consensus 275 g~y---------~---------------------------------------------------------~~---sg--- 282 (691)
+.| | .+ .+
T Consensus 532 ~~ynwGY~~~~y~a~~~~ygt~p~~~~~~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~ 611 (1014)
T 2ya1_A 532 SNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPR 611 (1014)
T ss_dssp CSCCCSCSBSCSSSBCSTTCSCTTCTTHHHHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf 77666777676756662104787666654999999999998769999999712545663012568887158707999865
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf ---66867899999999999999999993560299992552012468654354225865456655689989993679997
Q 005552 283 ---CGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLI 359 (691)
Q Consensus 283 ---~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i 359 (691)
+++++|+++|+||++|+++++||++||||||||||+++++... +|..+ +.+..
T Consensus 612 ~~~~~~~l~~~~~~vr~~i~d~l~~W~~e~gvDGfR~D~~~~~~~~--~~~~~----------------------~~~~~ 667 (1014)
T 2ya1_A 612 TSFGGGRLGTTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDHDAA--SIEEA----------------------YKAAR 667 (1014)
T ss_dssp EETTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHH--HHHHH----------------------HHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HHHHH----------------------HHHHH
T ss_conf 5778887676899999999999999998539409999687887989--99999----------------------99999
Q ss_pred HCCCCCCCCEEEEECCCCC-C--CCCCCCCCCCCCCCEE---CCCCCHHHHHHHCCCC-------------CCHHHHHHH
Q ss_conf 4299988748994037889-8--6433678888534134---3710089999781999-------------928889999
Q 005552 360 SNDPILRGVKLIAEAWDTG-G--LYQVGIFPHWGIWSEW---NGKYRDIVRQFIKGTD-------------GFAGAFAEC 420 (691)
Q Consensus 360 ~~dp~~~~~~liaE~w~~~-~--~~~~~~fp~~~~~~~w---n~~f~~~~~~~~~g~~-------------~~~~~~~~~ 420 (691)
..+| ++++|||.|+.. + .+....++ ..|..| +..|.+.++.++++.. .....+...
T Consensus 668 ~~~p---~~~ligE~W~~~~g~~~~~~~~~~--~~w~~~~~~~~~f~d~~r~~l~~~~~~~~~~~~~~g~~~~~~~l~~~ 742 (1014)
T 2ya1_A 668 ALNP---NLIMLGEGWRTYAGDENMPTKAAD--QDWMKHTDTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKN 742 (1014)
T ss_dssp HHCT---TCEEEECCCSCCCCSTTCCCCBSS--GGGGGGCSSSEEECHHHHHHHSCCTTSTTCCCTTTTCCEEHHHHHHH
T ss_pred HHCC---CEEEEEEECCCCCCCCCCCCCCCC--CCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHH
T ss_conf 7499---769998542555676543124454--00454499524131799999860266445312221675329999998
Q ss_pred HCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 81998642599999986177753389986444663012342126999999999987776688883023899999999999
Q 005552 421 LCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMR 500 (691)
Q Consensus 421 l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k 500 (691)
+.+++..|. ...|..+|||++|||++|+.|++++..++|..+++.+ ....+++|
T Consensus 743 l~~~~~~~~--~~~p~~~vnfv~nHD~~~l~d~v~~~~~~~~~~~~~~------------------------~~~~~~~r 796 (1014)
T 2ya1_A 743 LIAQPTNFE--ADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENY------------------------AEIHRRLR 796 (1014)
T ss_dssp HTTCCSSSC--CSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHH------------------------HHHHHHHH
T ss_pred HHCCCCCCC--CCCHHHHEEEEECCCCCCCCCHHHHHCCCCCCCCHHH------------------------HHHHHHHH
T ss_conf 752843335--6780350574203788764100032035784320004------------------------78999999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC----------------------------------CCCCCCCCCCCC
Q ss_conf 9999998608931681577655678999997778----------------------------------998653364762
Q 005552 501 NFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCH----------------------------------DNDINYFRWDKK 546 (691)
Q Consensus 501 ~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~----------------------------------~~~~~~~~W~~~ 546 (691)
++++++|++||+||||||||+|+++.++++.||+ ++.+++|+|+..
T Consensus 797 la~~lll~spGiP~i~~GdE~g~t~~~~d~~~r~~~~~g~~~e~~~~~~~~~g~~f~~~~~~~dsy~~~~~~n~ldW~~~ 876 (1014)
T 2ya1_A 797 LGNLMVLTAQGTPFIHSGQEYGRTKQFRNPAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKA 876 (1014)
T ss_dssp HHHHHHHTSSSEEEEETTTTTTCCCBCCCGGGSSCCCTTTCCTTEEEEECTTSCEEEEEEEESCCTTCCHHHHCCCHHHH
T ss_pred HHHHHHHHCCCCCEEEECHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999986899848982354346678887256542211333101111010235532343334567899765123578633
Q ss_pred CC-----CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC
Q ss_conf 23-----310699999999999975745899998887-633762679999888899949999998267897999994999
Q 005552 547 EE-----SKSDFFRFCCLLTKFRHECESLGLSDFPTA-DRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASH 620 (691)
Q Consensus 547 ~~-----~~~~l~~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~~~~~~~~~~~~~vlaf~R~~~~~~~llVv~N~s~ 620 (691)
+. .+.++++|||+||+|||++|+|+.+++..+ ..+.|+... +.+.+...+.+++|.|....++.++|++|++.
T Consensus 877 ~~~~~~~~~~~l~~f~r~Li~LRk~~pal~~g~~~~~~~~~~~~~~~-g~~~~~~~~~v~a~~r~~~~~~~~lVv~N~~~ 955 (1014)
T 2ya1_A 877 TDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVHLITVP-GQNGVEKEDVVIGYQITAPNGDIYAVFVNADE 955 (1014)
T ss_dssp HCTTTCHHHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHEEESSCT-TSTTCCSEESEEEEEEECTTSCEEEEEEECSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCC-CCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
T ss_conf 34334501499999999999998519312488623315745997579-98766678958999997899998999994999
Q ss_pred CCEEEECCCCC--CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEECC
Q ss_conf 85899769999--99639991389999888768998136887642088787832885078599997469
Q 005552 621 LPVIISLPKRP--GYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP 687 (691)
Q Consensus 621 ~~~~v~lp~~~--g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~~~ 687 (691)
+++++.||... ...|.+++++............ . . .....+++|||+|++||+.+.
T Consensus 956 ~~~~~~lp~~~~~~~~~~~~~d~~~~~~~~~~~~~-~---~-------~~~~~~~~l~~~s~~Vl~~~~ 1013 (1014)
T 2ya1_A 956 KAREFNLGTAFAHLRNAEVLADENQAGPVGIANPK-G---L-------EWTEKGLKLNALTATVLRVSQ 1013 (1014)
T ss_dssp SCEEEECTTTTGGGGGCEEEECSSCBCSSCCSSCS-S---E-------EECSSEEEECTTEEEEEEECC
T ss_pred CCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCC-C---C-------CCCCCEEEECCCEEEEEEECC
T ss_conf 86799789865677743899868888865434455-5---2-------355998998589999999878
No 10
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=1.00 E-value=1 Score=545.39 Aligned_cols=526 Identities=19% Similarity=0.276 Sum_probs=351.5
Q ss_pred CCCCCCEEECC-CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCE
Q ss_conf 42210111124-34443322579889997089499489999757898589995648996688312476455556788996
Q 005552 72 SAELETAVIKK-PQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDV 150 (691)
Q Consensus 72 ~~~~~~~~~~~-~~~~~~~~~~g~~~~lGa~~~~~g~~F~vwAP~A~~V~l~l~~~~~~~~~~~~~~~~l~~~~~~~~gv 150 (691)
+.+..++-|.. -.||..+.+.| ||||++.++||+|+||||+|++|+|||++..+ . .....+.| ++++||
T Consensus 105 ~~~~~~~~~q~~~~~d~~~~y~~---plGa~~~~~g~~F~vwAp~A~~V~l~l~~~~~-~--~~~~~~~~----~~~~g~ 174 (884)
T 4aio_A 105 GKHVDVTGLQLPGVLDDMFAYTG---PLGAVFSEDSVSLHLWAPTAQGVSVCFFDGPA-G--PALETVQL----KESNGV 174 (884)
T ss_dssp SSEEEEEEEECHHHHHHHHCCCS---CCEEEECSSEEEEEEECTTCSEEEEEEESTTT-S--CEEEEEEC----EEETTE
T ss_pred CCEEECCCCCCCCCCCCCCCCCC---CCCCEEECCEEEEEEECCCCCEEEEEEEECCC-C--CEEEEEEE----CCCCCE
T ss_conf 97762034665762213203599---96677989999999999999989999895899-9--74441005----387998
Q ss_pred EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 99998399999629999839568999974589710038354331013456887999998887600003999999999999
Q 005552 151 WHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDL 230 (691)
Q Consensus 151 W~~~i~g~~~g~~Y~y~i~~~~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f~W~~~~ 230 (691)
|+++|+++.+|++|+|+|++ ..+..|+++ .++++||||++++.++..+.+.... ..... +..+.|..+.
T Consensus 175 W~~~~~~~~~g~~Y~y~v~~-~~~~~~~~~--~~~~~DPya~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~ 243 (884)
T 4aio_A 175 WSVTGPREWENRYYLYEVDV-YHPTKAQVL--KCLAGDPYARSLSANGARTWLVDIN-------NETLK-PASWDELADE 243 (884)
T ss_dssp EEEEEEGGGTTCEEEEEEEE-EETTTTEEE--EEEECCTTCSEESGGGSSEECCCTT-------CGGGS-CTTGGGGGGT
T ss_pred EEEEECCCCCCCEEEEEEEC-CCCCCCCCC--CCCCCCCCEEEECCCCCCEEEECCC-------CCCCC-CCCCCCCCCC
T ss_conf 99998988899889999947-788735325--7621478864664689871676686-------67548-6100302234
Q ss_pred -CCCCCCCCCEEEEEEECCCCC-CCCCCCCCCCCHHCCC-------CCCCCC----------------------------
Q ss_conf -999999870399984157422-6999998874320201-------112465----------------------------
Q 005552 231 -PLKYPQRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVV-------EKLDHL---------------------------- 273 (691)
Q Consensus 231 -~~~~~~~~~iIYElhVr~Ft~-~~~~~~~~~Gtf~gi~-------ekLdyL---------------------------- 273 (691)
++..+++++||||+|||+||. +++.+.+.+|||+|++ ++||||
T Consensus 244 ~p~~~~~~~~vIYE~HVr~ft~~~~~~~~~~~Gtf~g~~~~~~~~ie~L~yLk~LGVtaveLmPv~e~~~~~~~~~~~~~ 323 (884)
T 4aio_A 244 KPKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVHLLPSFHFAGVDDIKSNWKF 323 (884)
T ss_dssp SCCCSCGGGCCEEEECHHHHHTTCTTSCTTTTTSGGGGSCTTSHHHHHHHHHHHHTCCEEEECCCEEESSSCSCGGGCCC
T ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 67899931288999975711357888774556763553441045777767999709877996666656765544456432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 005552 274 -------------------------------------------------------------------------------- 273 (691)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (691)
T Consensus 324 ~d~~~l~~~~~~~~~~~~l~~~~~~~~~~~WGYd~~~y~a~~~~ygt~~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NH 403 (884)
T 4aio_A 324 VDECELATFPPGSDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRVVMDVVYNH 403 (884)
T ss_dssp CCHHHHTTSCTTCSHHHHHHHHHTTTSSCCCCCCEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 22222345577567777666665422345507675613578765456865541579999999998746770024302555
Q ss_pred ---C-------------CCC---------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
Q ss_conf ---8-------------931---------036686686789999999999999999999356029999255201246865
Q 005552 274 ---K-------------GEF---------YNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSL 328 (691)
Q Consensus 274 ---~-------------g~y---------~~~sg~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~ 328 (691)
. ..| +....+++.+|+++|+|+++++++++||+++|||||||+|++..+.+....
T Consensus 404 ts~~h~wf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~w~~~~~vDg~R~D~~~~~~~~~~~ 483 (884)
T 4aio_A 404 LDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDRLIVDDLLNWAVNYKVDGFRFDLMGHIMKRTMM 483 (884)
T ss_dssp CSCCSSSSTTCCHHHHSTTTSBCBCTTSCBCCTTSSSBBCTTSHHHHHHHHHHHHHHHHHSCCCEEEETTGGGSBHHHHH
T ss_pred CCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 66778544232655567640011478988567677555588995044444540133555405656774320045667777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC---------CCCCCCCCCCCCCEECCCC
Q ss_conf 4354225865456655689989993679997429998874899403788986---------4336788885341343710
Q 005552 329 WDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGL---------YQVGIFPHWGIWSEWNGKY 399 (691)
Q Consensus 329 w~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~dp~~~~~~liaE~w~~~~~---------~~~~~fp~~~~~~~wn~~f 399 (691)
... .. + .........+.....++++|.|+.... ++.+.++ ..+.+|++.+
T Consensus 484 ~~~-~~----~--------------~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~--~~i~e~nd~~ 542 (884)
T 4aio_A 484 RAK-SA----L--------------QSLTTDAHGVDGSKIYLYGEGWDFAEVARNQRGINGSQLNMSG--TGIGSFNDRI 542 (884)
T ss_dssp HHH-HH----H--------------HTCCHHHHSSCGGGCEEEECCCCCGGGGGGTTSSBCCTTTTTT--SSCEEEEHHH
T ss_pred HHH-HH----C--------------CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHCCCCC--CCCHHHHHHH
T ss_conf 655-53----1--------------1113100122223310003577653223332333200015776--4105442567
Q ss_pred CHHHHHHHCCCCC-------------------CHH-----------HHHHHHCCCCCC----------------------
Q ss_conf 0899997819999-------------------288-----------899998199864----------------------
Q 005552 400 RDIVRQFIKGTDG-------------------FAG-----------AFAECLCGSPNL---------------------- 427 (691)
Q Consensus 400 ~~~~~~~~~g~~~-------------------~~~-----------~~~~~l~gs~~~---------------------- 427 (691)
++.++.+...... ... .+...+.+....
T Consensus 543 r~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 622 (884)
T 4aio_A 543 RDAINGGNPFGNPLQQGFNTGLFLEPNGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGL 622 (884)
T ss_dssp HHHHHCSCTTSCTTCCCTTTTTTTSCCSSCCCCHHHHHHHHHHHHHHHHHHHBTCBSSCEEECTTSCEEETTTSBCTTSC
T ss_pred HHHHHCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHCCCHHHHHHCCC
T ss_conf 76543025554201000101332110112036630323202321112330357664552102520000011034541243
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25999999861777533899864446630123421269999999999877766888830238999999999999999998
Q 005552 428 YQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLM 507 (691)
Q Consensus 428 ~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~~~dg~~~~~sw~~g~~g~~~~~~~~~~~~~~~k~a~a~ll 507 (691)
.......+...+||++|||+.|+.+.+....+... ..+.+.+++|++++++|
T Consensus 623 ~~~~~~~p~~~~nfl~NHD~~r~~~~~~~~~~~~~----------------------------~~~~r~~r~kla~alll 674 (884)
T 4aio_A 623 PVGYTASPIETINYVSAHDNETLFDVISVKTPMIL----------------------------SVDERCRINHLASSMMA 674 (884)
T ss_dssp BSCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTS----------------------------CHHHHHHHHHHHHHHHH
T ss_pred CHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC----------------------------CHHHHHHHHHHHHHHHH
T ss_conf 10101475021133357888740022353456540----------------------------29999999999999999
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCC--------------------------CCCHHHH
Q ss_conf 60893168157765567899999777899-------86533647622--------------------------3310699
Q 005552 508 VSQGVPMISMGDEYGHTKGGNNNTYCHDN-------DINYFRWDKKE--------------------------ESKSDFF 554 (691)
Q Consensus 508 t~pGiP~Iy~GdE~G~~~~g~~n~y~~~~-------~~~~~~W~~~~--------------------------~~~~~l~ 554 (691)
++||+||||||||+||++.+++|+|++++ .|.+|+|+... .++.+++
T Consensus 675 t~pG~P~IY~GdEiG~t~~~~~n~y~~~~~~~~~D~~R~p~~W~~~~~~g~~~~~~w~~~~~~~~~~~v~~q~~d~~sl~ 754 (884)
T 4aio_A 675 LSQGIPFFHAGDEILRSKSIDRDSYNSGDWFNKLDFTYETNNWGVGLPPSEKNEDNWPLMKPRLENPSFKPAKGHILAAL 754 (884)
T ss_dssp TSBSEEEEETTGGGTCCCTTCSCGGGSHHHHHCCCTTCSCCSCSSCCCCHHHHGGGHHHHHHHHTCGGGSCCHHHHHHHH
T ss_pred HCCCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHH
T ss_conf 83898198736324766889865435841100346466867767666766667764223550113414443112657899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCCCCCCCCCCCEEEEEEECCC------------CCEEEEEEECCCC
Q ss_conf 999999999975745899998887-633762679999888899949999998267------------8979999949998
Q 005552 555 RFCCLLTKFRHECESLGLSDFPTA-DRLQWHGHAPGLPDWSDKSRFVAFTLIDSV------------KGEIYVAFNASHL 621 (691)
Q Consensus 555 ~~~k~Li~LRk~~paL~~g~~~~~-~~i~w~~~~~~~~~~~~~~~vlaf~R~~~~------------~~~llVv~N~s~~ 621 (691)
+|||+||+|||++|+|+.|++..+ ..+.|+... -.....+++|.+.+.. ++.++||+|++++
T Consensus 755 ~~yr~Li~LRk~~paL~~g~~~~i~~~~~~~~~~-----~~~~~gv~~~~~~d~~~~~~~~~~r~~~~~~llVv~N~s~~ 829 (884)
T 4aio_A 755 DSFVDILKIRYSSPLFRLSTANDIKQRVRFHNTG-----PSLVPGVIVMGIEDARGESPEMAQLDTNFSYVVTVFNVCPH 829 (884)
T ss_dssp HHHHHHHHHHTTCGGGGCCSHHHHHHHEEECSCS-----TTCCTTEEEEEEECCCSSSCSSCCCCSSEEEEEEEEECSSS
T ss_pred HHHHHHHHHHHCCHHHHCCCHHHHHHCCEEECCC-----CCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCC
T ss_conf 9999999998619253169877873052540268-----65567369998416777633578743799979999959988
Q ss_pred CEEEECCCCC--CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEEEEC
Q ss_conf 5899769999--9963999138999988876899813688764208878783288507859999746
Q 005552 622 PVIISLPKRP--GYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLS 686 (691)
Q Consensus 622 ~~~v~lp~~~--g~~w~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~s~~vl~~~ 686 (691)
+++++||... +..|..++++..... .... . ......+++|||+|++||++.
T Consensus 830 ~~~v~LP~~~~~~~~l~~~~~~~~~~~---~~~~-----~------~~~~~~~ltvP~~S~~Vlv~~ 882 (884)
T 4aio_A 830 EVSMDIPALASMGFELHPVQVNSSDTL---VRKS-----A------YEAATGRFTVPGRTVSVFVEP 882 (884)
T ss_dssp CEEEECGGGCSSCCEECHHHHTCSCTT---GGGC-----E------EETTTTEEEECTTEEEEEEEE
T ss_pred CEEEECCCCCCCCEEEEEEECCCCCCC---CCCC-----C------EECCCCEEEECCCEEEEEEEE
T ss_conf 779988888879629988311577655---5677-----4------104687899899799999882
Done!