Query 005553
Match_columns 691
No_of_seqs 425 out of 2486
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 18:25:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005553.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2060-2064//hhsearch_pdb/005553hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g1v_A Flavohemoglobin; three 1.0 1 1 206.3 24.9 172 302-490 147-341 (399)
2 4eh1_A Flavohemoprotein; struc 1.0 1 1 198.1 19.6 169 303-491 2-182 (243)
3 3lo8_A Ferredoxin--NADP reduct 1.0 1 1 197.4 18.8 211 304-524 28-275 (311)
4 1tvc_A Methane monooxygenase c 1.0 1 1 196.7 13.7 168 305-490 11-186 (250)
5 3vo2_A Putative uncharacterize 1.0 1 1 196.5 19.9 210 305-524 34-274 (310)
6 1krh_A Benzoate 1,2-dioxygenas 1.0 1 1 196.2 17.9 167 304-490 108-279 (338)
7 4fk8_A Ferredoxin--NADP reduct 1.0 1 1 196.0 15.1 154 302-468 17-174 (271)
8 1qfj_A Protein (flavin reducta 1.0 1 1 196.0 15.9 167 305-490 3-171 (232)
9 1gvh_A Flavohemoprotein; oxido 1.0 1 1 192.8 21.3 171 303-490 151-328 (396)
10 2eix_A NADH-cytochrome B5 redu 1.0 1 1 191.7 17.0 205 304-524 11-223 (243)
No 1
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=1.00 E-value=1 Score=206.32 Aligned_cols=172 Identities=15% Similarity=0.206 Sum_probs=142.2
Q ss_pred CCCCEEEEEEEEEECCCEEEEEEECCCC--C-----CCCCCCEEEEEEC----CCCCCEEEEEEEEECCCCCCCEEEEEE
Q ss_conf 3442189999998369779999834999--8-----3289987999718----789860343486328999999599999
Q 005553 302 QSRRAVRLVSARMLPGETVELNFSKAPG--L-----SYNPTSIMFINVP----SISKLQWHPFTVTSSSNLEPEKLSVVI 370 (691)
Q Consensus 302 ~~~~~~~i~s~~~l~~~~v~l~i~~~~~--~-----~~~pGQ~v~L~~p----~~s~~q~HPFTIas~p~~~~~~l~l~I 370 (691)
+.++.+++++++.+++++.++++..+.+ + .++||||+.++++ +.+..++|||||++.|+ ++.++|.|
T Consensus 147 ~~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~V 224 (399)
T 4g1v_A 147 PGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAV 224 (399)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEE
T ss_pred CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCC--CCEEEEEE
T ss_conf 7614789999887379859999992899847767888899987899996799888652221001357899--98599999
Q ss_pred EC--------CCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC----CCCEEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 81--------8961599988606999985149999877899988889----99879998558880207999999988213
Q 005553 371 KG--------EGSWSKKLYQVLSSPSSIDRLDVSVEGPYGPVSTHFL----RHDTLVMVSGGSGITPFISVIRELMYAST 438 (691)
Q Consensus 371 K~--------~Gg~T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~----~~~~vvlVAGGsGITp~lsil~~l~~~~~ 438 (691)
|. .|.+|+.|++.++.|+ ++.+.||||.+..+.. ..++++|||||+||||++++++++..+..
T Consensus 225 k~~~~~~~~~~G~~S~~L~~~l~~Gd-----~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~ 299 (399)
T 4g1v_A 225 KMEAARENFPAGLVSEYLHKDAKVGD-----EIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNP 299 (399)
T ss_dssp ECCCCBTTBCCCHHHHHHHHTCCTTC-----EEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCT
T ss_pred EECCCCCCCCCCEEHHHHHHCCCCCC-----EEEEEECCCCEEECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHCCC
T ss_conf 96147888999876167871789999-----8999832454063764455789988999554308589999999997199
Q ss_pred CCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 5889998699999958989606788625327999999998449999991899
Q 005553 439 VTKCKTPQVILICSFKNSSDLTMLDLLLPISGTPTELPNLKLQIEAYVTREK 490 (691)
Q Consensus 439 ~~~~~~~~V~Liw~vR~~~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~ 490 (691)
.++++++|++|+.+++.+.+++.... ....+++++.+++++.
T Consensus 300 -----~~~v~l~~~~r~~~~~~~~~el~~l~-----~~~~~~~~~~~~s~~~ 341 (399)
T 4g1v_A 300 -----NRPIYWIQSSYDEKTQAFKKHVDELL-----AECANVDKIIVHTDTE 341 (399)
T ss_dssp -----TSCEEEEEEESSSTTSTTHHHHHHHH-----TTCSSEEEEEEETTTS
T ss_pred -----CCCEEEEEECCCHHHHHHHHHHHHHH-----HHCCCCEEEEEEECCC
T ss_conf -----99789999669878736699999999-----7489918999996798
No 2
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=1.00 E-value=1 Score=198.10 Aligned_cols=169 Identities=17% Similarity=0.247 Sum_probs=141.0
Q ss_pred CCCEEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCC--CCEEEEEEEEECCCCCCCEEEEEEECC----
Q ss_conf 442189999998369779999834999---83289987999718789--860343486328999999599999818----
Q 005553 303 SRRAVRLVSARMLPGETVELNFSKAPG---LSYNPTSIMFINVPSIS--KLQWHPFTVTSSSNLEPEKLSVVIKGE---- 373 (691)
Q Consensus 303 ~~~~~~i~s~~~l~~~~v~l~i~~~~~---~~~~pGQ~v~L~~p~~s--~~q~HPFTIas~p~~~~~~l~l~IK~~---- 373 (691)
.++.+++++++.+++++.++++..+.. ..++||||+++++|..+ ..++|||||+|.|. ++.+++.||..
T Consensus 2 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~~~ 79 (243)
T 4eh1_A 2 DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGVGS 79 (243)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTTTS
T ss_pred CCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCC--CCEEEEEEEEEECCC
T ss_conf 867889999997599829999993898757886999879999866998643323348455899--984999999960687
Q ss_pred ---CCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf ---96159998860699998514999987789998888999879998558880207999999988213588999869999
Q 005553 374 ---GSWSKKLYQVLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILI 450 (691)
Q Consensus 374 ---Gg~T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Li 450 (691)
|.+|+.|++.++.|+ ++.++||||.+..+ ..+++++|||||+||||++++++++..+.. .+ +.++
T Consensus 80 ~~~G~~S~~l~~~l~~G~-----~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~-----~~-v~l~ 147 (243)
T 4eh1_A 80 DNPGLVSHYLHNNVKVGD-----SVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQNK-----SG-VTYL 147 (243)
T ss_dssp SSCCHHHHHHHHHCCTTC-----EEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC-----CS-EEEE
T ss_pred CCCCEEHHHHHHCCCCCC-----EEEEECCCCCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCC-----CE-EEEE
T ss_conf 999766557873389999-----99997267655768-999878999754508999999999997489-----80-9999
Q ss_pred EEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC
Q ss_conf 99589896067886253279999999984499999918999
Q 005553 451 CSFKNSSDLTMLDLLLPISGTPTELPNLKLQIEAYVTREKQ 491 (691)
Q Consensus 451 w~vR~~~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~~ 491 (691)
|++|+.+++.+.+++.... ... +++++.+++++.+
T Consensus 148 ~~~r~~~~~~~~~el~~l~-----~~~-~~~~~~~~s~~~~ 182 (243)
T 4eh1_A 148 YACNSAKEHTFAQETAQLI-----AQQ-GWMQQVWYRDESA 182 (243)
T ss_dssp EEESSGGGCTTHHHHHHHH-----HHH-TCEEEEEESSCCC
T ss_pred EEECCHHHHHHHHHHHHHH-----HHC-CEEEEEEECCCCC
T ss_conf 9807754656899999999-----757-9089999866887
No 3
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=1.00 E-value=1 Score=197.43 Aligned_cols=211 Identities=15% Similarity=0.156 Sum_probs=156.4
Q ss_pred CCEEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCCC------CCEEEEEEEEECCCC---CCCEEEEE
Q ss_conf 4218999999836-----977999983499983289987999718789------860343486328999---99959999
Q 005553 304 RRAVRLVSARMLP-----GETVELNFSKAPGLSYNPTSIMFINVPSIS------KLQWHPFTVTSSSNL---EPEKLSVV 369 (691)
Q Consensus 304 ~~~~~i~s~~~l~-----~~~v~l~i~~~~~~~~~pGQ~v~L~~p~~s------~~q~HPFTIas~p~~---~~~~l~l~ 369 (691)
...+++++++.++ +++.++++..+..+.|+||||++|++|..+ ..++|||||+|.|.+ +++.++|.
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~ 107 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLC 107 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEE
T ss_pred CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEE
T ss_conf 71789996374368778786189998079987644898889968887645579888855567457876657899889999
Q ss_pred EECC---------------CCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCHHHHHHH
Q ss_conf 9818---------------96159998860699998514999987789998888--999879998558880207999999
Q 005553 370 IKGE---------------GSWSKKLYQVLSSPSSIDRLDVSVEGPYGPVSTHF--LRHDTLVMVSGGSGITPFISVIRE 432 (691)
Q Consensus 370 IK~~---------------Gg~T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~--~~~~~vvlVAGGsGITp~lsil~~ 432 (691)
||.. |.+|+.|.+ ++.|+ .+.++||||.+.... ..+++++|||||+||||+++++++
T Consensus 108 Vk~~~~~~~~~~~~~~~~~G~~S~~L~~-l~~Gd-----~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~ 181 (311)
T 3lo8_A 108 VRRAVYYDPETGKEDPSKNGVCSNFLCN-SKPGD-----KIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRR 181 (311)
T ss_dssp EECCCCCCTTTCCCCGGGSCHHHHHHHT-CCTTC-----EEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHC-CCCCC-----EEEEEECCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHH
T ss_conf 9997752456676776889704458863-99949-----89998346884128876899988999888789999999999
Q ss_pred HHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCC-CCCCCCCCCEEEC-----C
Q ss_conf 988213588999869999995898960678862532799999999844999999189999-9854223320540-----5
Q 005553 433 LMYASTVTKCKTPQVILICSFKNSSDLTMLDLLLPISGTPTELPNLKLQIEAYVTREKQP-TTDNSKLIRALWF-----K 506 (691)
Q Consensus 433 l~~~~~~~~~~~~~V~Liw~vR~~~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~~~-~~~~~~~~~~~~~-----~ 506 (691)
+..+..++....+++.|+|++|+.+++.+.+++.... .....+++++.++|+++.. ....+...+.+.- .
T Consensus 182 ~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~----~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~ 257 (311)
T 3lo8_A 182 MFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYL----KQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIF 257 (311)
T ss_dssp HHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHH----HHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHH
T ss_pred HHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH----HHCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHH
T ss_conf 9973366556778789999647747756999999999----829886899999898876667885221689998799999
Q ss_pred CCCCCCCCEEEECCCCHH
Q ss_conf 688999801230899026
Q 005553 507 PLATDAPISSVLGPNRWL 524 (691)
Q Consensus 507 P~~~~~~~~~v~gp~~~~ 524 (691)
..........+|||++|.
T Consensus 258 ~~~~~~~~vyvCGp~~m~ 275 (311)
T 3lo8_A 258 KLLDGGAHIYFCGLKGMM 275 (311)
T ss_dssp HHHHTTCEEEEEECGGGH
T ss_pred HHHCCCCEEEEECCHHHH
T ss_conf 753489589998998899
No 4
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=1.00 E-value=1 Score=196.67 Aligned_cols=168 Identities=19% Similarity=0.306 Sum_probs=139.1
Q ss_pred CEEEEEEEEEECCCEEEEEEEC-C-C----CCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECC--CCH
Q ss_conf 2189999998369779999834-9-9----983289987999718789860343486328999999599999818--961
Q 005553 305 RAVRLVSARMLPGETVELNFSK-A-P----GLSYNPTSIMFINVPSISKLQWHPFTVTSSSNLEPEKLSVVIKGE--GSW 376 (691)
Q Consensus 305 ~~~~i~s~~~l~~~~v~l~i~~-~-~----~~~~~pGQ~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~ 376 (691)
..+++++++.+++++.++++.. + . ...++||||+.+++|.. .++|||||++.|. +++.+++.||.. |.+
T Consensus 11 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~-~~~~l~i~vk~~~~G~~ 87 (250)
T 1tvc_A 11 FEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPN-PEGRLEFLIRVLPEGRF 87 (250)
T ss_dssp EEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSS-SSCCEEEEECCCTTSSS
T ss_pred EEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC--CCCCCCCCCCCCC-CCCEEEEEEEECCCCCC
T ss_conf 99999999986899699999945877766656838986799995898--6510541277998-99869999998899873
Q ss_pred HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC
Q ss_conf 59998860699998514999987789998888999879998558880207999999988213588999869999995898
Q 005553 377 SKKLYQVLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKNS 456 (691)
Q Consensus 377 T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~~ 456 (691)
|+.|++.++.|+ ++.++||||.+..+....++++|||||+||||++++++++...+. .++++++|++|+.
T Consensus 88 s~~l~~~l~~Gd-----~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~-----~~~v~l~~~~r~~ 157 (250)
T 1tvc_A 88 SDYLRNDARVGQ-----VLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTA-----PNETRIYFGVNTE 157 (250)
T ss_dssp HHHHHHHSSSSS-----EEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHTC-----CSCEEEEEECSSS
T ss_pred HHHHHHCCCCCC-----EEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC-----CCEEEEEEEECCH
T ss_conf 589984189999-----999985862116276679659999723478799999999986399-----9669999971888
Q ss_pred CCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 9606788625327999999998449999991899
Q 005553 457 SDLTMLDLLLPISGTPTELPNLKLQIEAYVTREK 490 (691)
Q Consensus 457 ~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~ 490 (691)
+++.+.+++.... ....+++++.++|+++
T Consensus 158 ~~~~~~~el~~l~-----~~~~~~~~~~~~s~~~ 186 (250)
T 1tvc_A 158 PELFYIDELKSLE-----RSMRNLTVKACVWHPS 186 (250)
T ss_dssp TTCCCHHHHHHHH-----HHSSSCEEEECCSSCS
T ss_pred HHHHHHHHHHHHH-----HHCCCEEEEEEECCCC
T ss_conf 9944599999999-----8689849999953688
No 5
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=1.00 E-value=1 Score=196.49 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=154.9
Q ss_pred CEEEEEEEEEECCC-----EEEEEEECCCCCCCCCCCEEEEEECCCC----CCEEEEEEEEECCCC---CCCEEEEEEEC
Q ss_conf 21899999983697-----7999983499983289987999718789----860343486328999---99959999981
Q 005553 305 RAVRLVSARMLPGE-----TVELNFSKAPGLSYNPTSIMFINVPSIS----KLQWHPFTVTSSSNL---EPEKLSVVIKG 372 (691)
Q Consensus 305 ~~~~i~s~~~l~~~-----~v~l~i~~~~~~~~~pGQ~v~L~~p~~s----~~q~HPFTIas~p~~---~~~~l~l~IK~ 372 (691)
..+++++.+.++++ +.++++..+..++|.||||++|++|..+ ..++|||||+|+|.. +++.++|.||.
T Consensus 34 ~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~ 113 (310)
T 3vo2_A 34 YVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKR 113 (310)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf 89999978981588997628999995799876668878999798758899737643103587875647899989999999
Q ss_pred C-----------CCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 8-----------961599988606999985149999877899988-8899987999855888020799999998821358
Q 005553 373 E-----------GSWSKKLYQVLSSPSSIDRLDVSVEGPYGPVST-HFLRHDTLVMVSGGSGITPFISVIRELMYASTVT 440 (691)
Q Consensus 373 ~-----------Gg~T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~-~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~ 440 (691)
. |.+|+.|.+ ++.|+ ++.++||||.+.. +....++++|||||+||||++++++++..+....
T Consensus 114 ~~~~~~~~~~~~G~~S~~L~~-l~~Gd-----~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~ 187 (310)
T 3vo2_A 114 LVYTNDQGEIVKGVCSNFLCD-LKPGA-----DVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHED 187 (310)
T ss_dssp CEEECTTSCEEECHHHHHHHT-CCTTC-----EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTT
T ss_pred EEECCCCCCCCCCCHHHHHHC-CCCCC-----EEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 874368887578500457861-89979-----899993358742278788987899958941568999999999852554
Q ss_pred CCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCEEEC------CCCCCCCC
Q ss_conf 899986999999589896067886253279999999984499999918999-99854223320540------56889998
Q 005553 441 KCKTPQVILICSFKNSSDLTMLDLLLPISGTPTELPNLKLQIEAYVTREKQ-PTTDNSKLIRALWF------KPLATDAP 513 (691)
Q Consensus 441 ~~~~~~V~Liw~vR~~~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~~-~~~~~~~~~~~~~~------~P~~~~~~ 513 (691)
....+++.|+|++|+.+++.+.+++.... .....+++++.++|+++. .....+...+.+.. .....+..
T Consensus 188 ~~~~~~v~L~~g~r~~~d~~~~~el~~l~----~~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~ 263 (310)
T 3vo2_A 188 YKFSGLAWLFLGVPTSDSLLYKEELEKMK----EMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNT 263 (310)
T ss_dssp CCCCSEEEEEEEESSGGGCCSHHHHHHHH----HHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTE
T ss_pred CCCCCCEEEEEEECCHHHCCCHHHHHHHH----HHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC
T ss_conf 56778689999806746451399999999----84999789999988788777886034488999999999975046995
Q ss_pred CEEEECCCCHH
Q ss_conf 01230899026
Q 005553 514 ISSVLGPNRWL 524 (691)
Q Consensus 514 ~~~v~gp~~~~ 524 (691)
...+|||++|.
T Consensus 264 ~vyvCGp~~M~ 274 (310)
T 3vo2_A 264 YVYMCGLKGME 274 (310)
T ss_dssp EEEEEESTTHH
T ss_pred EEEEECCHHHH
T ss_conf 89996988999
No 6
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=1.00 E-value=1 Score=196.22 Aligned_cols=167 Identities=17% Similarity=0.297 Sum_probs=139.3
Q ss_pred CCEEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECC--CCHHH
Q ss_conf 4218999999836977999983499---983289987999718789860343486328999999599999818--96159
Q 005553 304 RRAVRLVSARMLPGETVELNFSKAP---GLSYNPTSIMFINVPSISKLQWHPFTVTSSSNLEPEKLSVVIKGE--GSWSK 378 (691)
Q Consensus 304 ~~~~~i~s~~~l~~~~v~l~i~~~~---~~~~~pGQ~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~ 378 (691)
...+++++++.+++++.++++..+. ...++||||+++++|.. .++|||||+|.|. ++.++|.||.. |.+|+
T Consensus 108 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~--~~~l~~~vk~~~~G~~S~ 183 (338)
T 1krh_A 108 HFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPG--NRLTGFVVRNVPQGKMSE 183 (338)
T ss_dssp EEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTT--CSEEEEEEECCTTCHHHH
T ss_pred EEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCC--CCCCCCCCCCCCC--CCEEEEEEEECCCCCCHH
T ss_conf 898999999975898799999938987777739998699984998--8640005267999--996999999858987514
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 99886069999851499998778999888899987999855888020799999998821358899986999999589896
Q 005553 379 KLYQVLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKNSSD 458 (691)
Q Consensus 379 ~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~~~~ 458 (691)
.|++.++.|+ ++.++||||.+..+. ..++++|||||+||||++++++++...+. .++++|+|++|+.++
T Consensus 184 ~L~~~l~~Gd-----~v~v~gP~G~f~~~~-~~~~~vliagGtGiaP~~s~l~~l~~~~~-----~~~v~l~~~~r~~~d 252 (338)
T 1krh_A 184 YLSVQAKAGD-----KMSFTGPFGSFYLRD-VKRPVLMLAGGTGIAPFLSMLQVLEQKGS-----EHPVRLVFGVTQDCD 252 (338)
T ss_dssp HHHTTCCTTC-----EEEEEEEECSCSCCC-CSSCEEEEEEGGGHHHHHHHHHHHHHHCC-----SSCEEEEEEESSGGG
T ss_pred HHHHCCCCCC-----EEEEECCCCCEEECC-CCCEEEEEECCCCHHHHHHHHHHHHHCCC-----CCEEEEEEEECCHHH
T ss_conf 6763568999-----999977734318578-99618999723147589999999997199-----972999999589899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 06788625327999999998449999991899
Q 005553 459 LTMLDLLLPISGTPTELPNLKLQIEAYVTREK 490 (691)
Q Consensus 459 l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~ 490 (691)
+.+.+++.... ....+++++.++++++
T Consensus 253 ~~~~~el~~l~-----~~~~~~~~~~~~s~~~ 279 (338)
T 1krh_A 253 LVALEQLDALQ-----QKLPWFEYRTVVAHAE 279 (338)
T ss_dssp CCCHHHHHHHH-----HHCTTEEEEEEETTCC
T ss_pred HHHHHHHHHHH-----HHCCCEEEEEEEECCC
T ss_conf 51299999999-----8689929999996688
No 7
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=1.00 E-value=1 Score=196.04 Aligned_cols=154 Identities=19% Similarity=0.285 Sum_probs=132.2
Q ss_pred CCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECC--CCHHHH
Q ss_conf 344218999999836977999983499983289987999718789860343486328999999599999818--961599
Q 005553 302 QSRRAVRLVSARMLPGETVELNFSKAPGLSYNPTSIMFINVPSISKLQWHPFTVTSSSNLEPEKLSVVIKGE--GSWSKK 379 (691)
Q Consensus 302 ~~~~~~~i~s~~~l~~~~v~l~i~~~~~~~~~pGQ~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~ 379 (691)
..+..+++++++.+++++.+++++.+..+.++||||+++++|..+..++|||||+|.|. ++.+++.+|.. |.+|+.
T Consensus 17 ~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~~~G~~s~~ 94 (271)
T 4fk8_A 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKVQNGPLTSR 94 (271)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECCTTCTTHHH
T ss_pred CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC--CCCEEEEEEEECCCCHHHH
T ss_conf 13536899999985899799999769988859998799983679961344474267899--9868999999789851268
Q ss_pred HHHHHCCCCCCCEEEEEEE-CCCCCCCCCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
Q ss_conf 9886069999851499998-7789998888-9998799985588802079999999882135889998699999958989
Q 005553 380 LYQVLSSPSSIDRLDVSVE-GPYGPVSTHF-LRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKNSS 457 (691)
Q Consensus 380 L~~~l~~g~~~~~~~v~Ve-GPyG~~~~~~-~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~~~ 457 (691)
|. .++.|+ ++.++ ||||.+..+. ..+++++|||||+||||++++++++..... .++++++|++|+.+
T Consensus 95 l~-~l~~Gd-----~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~-----~~~v~l~~~~r~~~ 163 (271)
T 4fk8_A 95 LQ-HLKVGD-----PVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER-----FDKVVLTHTCRLKG 163 (271)
T ss_dssp HT-TCCTTC-----EEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH-----CSEEEEEECCCSHH
T ss_pred HH-CCCCCC-----EEEEECCCCCCEECCCCCCCCEEEEEECCEEHHHHHHHHHHHHHCCC-----CCCEEEEEECCCHH
T ss_conf 86-089989-----99994187763366776788709999877889999999998885177-----99789999669889
Q ss_pred CHHHHHHHCCC
Q ss_conf 60678862532
Q 005553 458 DLTMLDLLLPI 468 (691)
Q Consensus 458 ~l~~~~~l~~~ 468 (691)
++.+.+++...
T Consensus 164 ~~~~~~el~~l 174 (271)
T 4fk8_A 164 ELAYMDYIKHD 174 (271)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
T ss_conf 97689999999
No 8
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=1.00 E-value=1 Score=196.00 Aligned_cols=167 Identities=14% Similarity=0.234 Sum_probs=139.4
Q ss_pred CEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECC--CCHHHHHHH
Q ss_conf 218999999836977999983499983289987999718789860343486328999999599999818--961599988
Q 005553 305 RAVRLVSARMLPGETVELNFSKAPGLSYNPTSIMFINVPSISKLQWHPFTVTSSSNLEPEKLSVVIKGE--GSWSKKLYQ 382 (691)
Q Consensus 305 ~~~~i~s~~~l~~~~v~l~i~~~~~~~~~pGQ~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L~~ 382 (691)
..+++.+++.+++++.++++..+..+.++||||+.+++|. .++|||||+|.|. +++.+++.||.. |+.|+++.+
T Consensus 3 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~-~~~~l~l~i~~~~~G~~s~~~~~ 78 (232)
T 1qfj_A 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPD-EKGFIELHIGASEINLYAKAVMD 78 (232)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTT-STTCEEEEEC------CCHHHHH
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCC---CCEEEEECCCCCC-CCCCEEEEEEECCCCCHHHHHHH
T ss_conf 6899999995489879999920997872999879998799---9532223377999-99938999998169840499998
Q ss_pred HHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHH
Q ss_conf 60699998514999987789998888999879998558880207999999988213588999869999995898960678
Q 005553 383 VLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKNSSDLTML 462 (691)
Q Consensus 383 ~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~~~~l~~~ 462 (691)
.++.|+ ++.++||||.+.......++++|||||+||||++++++++...+. .++++++|++|+.+++.+.
T Consensus 79 ~l~~Gd-----~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~-----~~~v~l~~~~r~~~~~~~~ 148 (232)
T 1qfj_A 79 RILKDH-----QIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNP-----NRDITIYWGGREEQHLYDL 148 (232)
T ss_dssp HHHHHS-----EEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHCT-----TCCEEEEEEESSGGGCTTH
T ss_pred HCCCCC-----EEEEECCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC-----CCCEEEEEEECCHHHHHHH
T ss_conf 679999-----899957734338678888838999705068699999999996399-----9968999961888996628
Q ss_pred HHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 8625327999999998449999991899
Q 005553 463 DLLLPISGTPTELPNLKLQIEAYVTREK 490 (691)
Q Consensus 463 ~~l~~~~~~~~~~~~~~l~i~iyvTr~~ 490 (691)
+++.+.. .+..+++++..+++++
T Consensus 149 ~el~~l~-----~~~~~~~~~~~~s~~~ 171 (232)
T 1qfj_A 149 CELEALS-----LKHPGLQVVPVVEQPE 171 (232)
T ss_dssp HHHHHHH-----HHCTTEEEEEEESSCC
T ss_pred HHHHHHH-----HHCCCEEEEEEECCCC
T ss_conf 9999999-----8789919999973799
No 9
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=1.00 E-value=1 Score=192.82 Aligned_cols=171 Identities=16% Similarity=0.232 Sum_probs=141.6
Q ss_pred CCCEEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCC--CCEEEEEEEEECCCCCCCEEEEEEECC--CC
Q ss_conf 442189999998369779999834999---83289987999718789--860343486328999999599999818--96
Q 005553 303 SRRAVRLVSARMLPGETVELNFSKAPG---LSYNPTSIMFINVPSIS--KLQWHPFTVTSSSNLEPEKLSVVIKGE--GS 375 (691)
Q Consensus 303 ~~~~~~i~s~~~l~~~~v~l~i~~~~~---~~~~pGQ~v~L~~p~~s--~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg 375 (691)
.++.+++++++.+++++.++++..+.+ ..++||||+.+++|..+ ..++|||||+|.|. ++.++|.||.. |.
T Consensus 151 ~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~G~ 228 (396)
T 1gvh_A 151 GTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKREEGGQ 228 (396)
T ss_dssp SEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECCTTCH
T ss_pred CCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCEECCCCC--CCEEEEEEEECCCCC
T ss_conf 747889999997589859999996899807878999827999568987651210214256899--986999999868986
Q ss_pred HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
Q ss_conf 15999886069999851499998778999888899987999855888020799999998821358899986999999589
Q 005553 376 WSKKLYQVLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKN 455 (691)
Q Consensus 376 ~T~~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~ 455 (691)
.|+.|++.++.|+ ++.+.||+|.+..+....++++|||||+||||++++++++...+. .+++.++|++|+
T Consensus 229 ~S~~L~~~l~~Gd-----~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~-----~~~v~l~~~~r~ 298 (396)
T 1gvh_A 229 VSNWLHNHANVGD-----VVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGH-----TAQVNWFHAAEN 298 (396)
T ss_dssp HHHHHHHTCCTTC-----EEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTC-----CSCEEEEEEESC
T ss_pred CHHHHHHCCCCCC-----EEEEECCCCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC-----CCCEEEEEEECC
T ss_conf 3078872679999-----899973774327788999978999556038678999999996399-----984899998578
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 89606788625327999999998449999991899
Q 005553 456 SSDLTMLDLLLPISGTPTELPNLKLQIEAYVTREK 490 (691)
Q Consensus 456 ~~~l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~ 490 (691)
.+++.+.+++.... .+..+++++.++++++
T Consensus 299 ~~~~~~~~el~~l~-----~~~~~~~~~~~~s~~~ 328 (396)
T 1gvh_A 299 GDVHAFADEVKELG-----QSLPRFTAHTWYRQPS 328 (396)
T ss_dssp TTTCCSHHHHHHHH-----HTSSSEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHH-----HHCCCEEEEEEECCCC
T ss_conf 89704599999999-----8789929999977788
No 10
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=1.00 E-value=1 Score=191.66 Aligned_cols=205 Identities=18% Similarity=0.181 Sum_probs=155.0
Q ss_pred CCEEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECC--CCHHH
Q ss_conf 4218999999836977999983499---983289987999718789860343486328999999599999818--96159
Q 005553 304 RRAVRLVSARMLPGETVELNFSKAP---GLSYNPTSIMFINVPSISKLQWHPFTVTSSSNLEPEKLSVVIKGE--GSWSK 378 (691)
Q Consensus 304 ~~~~~i~s~~~l~~~~v~l~i~~~~---~~~~~pGQ~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~ 378 (691)
+..+++++++.+++++.++++..+. ...++||||+.+++|..+..++||||++|.+. +++.+++.||.. |.+|+
T Consensus 11 ~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~-~~~~~~l~vk~~~~G~~S~ 89 (243)
T 2eix_A 11 YKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDD-EKGYFDLIIKVYEKGQMSQ 89 (243)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCTTCHHHH
T ss_pred EEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCC-CCCEEEEEEEECCCCCCCH
T ss_conf 599999999995899099999919998636768840799997538977875224468777-8988999999858997415
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 99886069999851499998778999888899987999855888020799999998821358899986999999589896
Q 005553 379 KLYQVLSSPSSIDRLDVSVEGPYGPVSTHFLRHDTLVMVSGGSGITPFISVIRELMYASTVTKCKTPQVILICSFKNSSD 458 (691)
Q Consensus 379 ~L~~~l~~g~~~~~~~v~VeGPyG~~~~~~~~~~~vvlVAGGsGITp~lsil~~l~~~~~~~~~~~~~V~Liw~vR~~~~ 458 (691)
.|. .++.|+ ++.++||||.+..+....++++|||||+||||++++++++..... ..+++.++|++|+.++
T Consensus 90 ~l~-~l~~Gd-----~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~----~~~~v~l~~~~r~~~~ 159 (243)
T 2eix_A 90 YID-HLNPGD-----FLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPK----EKTIINLIFANVNEDD 159 (243)
T ss_dssp HHH-TCCTTC-----EEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTT----CCCEEEEEEEEEEGGG
T ss_pred HHH-CCCCCC-----EEEEECCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC----CCCEEEEEEECCCHHH
T ss_conf 751-699999-----999977837788678877579999627228799999999983878----8847999997199799
Q ss_pred HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCEEEC--CCCCCCCCCEEEECCCCHH
Q ss_conf 067886253279999999984499999918999-99854223320540--5688999801230899026
Q 005553 459 LTMLDLLLPISGTPTELPNLKLQIEAYVTREKQ-PTTDNSKLIRALWF--KPLATDAPISSVLGPNRWL 524 (691)
Q Consensus 459 l~~~~~l~~~~~~~~~~~~~~l~i~iyvTr~~~-~~~~~~~~~~~~~~--~P~~~~~~~~~v~gp~~~~ 524 (691)
+.+.+++.... ....+++++..++++++ .....+...+...- .+.+.......+|||++|.
T Consensus 160 ~~~~~el~~l~-----~~~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~~~~~~~~~~~~vy~CGp~~m~ 223 (243)
T 2eix_A 160 ILLRTELDDMA-----KKYSNFKVYYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMMN 223 (243)
T ss_dssp CTTHHHHHHHH-----HHCTTEEEEEEEEECCTTCCSEESSCCHHHHHHHSCCTTSSEEEEEESSHHHH
T ss_pred HHHHHHHHHHH-----HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHH
T ss_conf 23899999999-----87899699999678984445767701999999765897778289999999999
Done!