BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005555
(691 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VY06|PREP2_ARATH Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=PREP2 PE=1 SV=1
Length = 1080
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/483 (78%), Positives = 430/483 (89%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EASMNTIEFSLRENNTGS PRGLSLML+S+ KWIYDM+PFEPLKYE+PL +LKAR+AE+G
Sbjct: 482 EASMNTIEFSLRENNTGSSPRGLSLMLQSIAKWIYDMDPFEPLKYEEPLKSLKARIAEKG 541
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
SK+VFSPLIE+YILNNPHCVT+EMQPDPEKAS +EA EK IL KVK+SMT+EDL ELARA
Sbjct: 542 SKSVFSPLIEEYILNNPHCVTIEMQPDPEKASLEEAEEKSILEKVKASMTEEDLTELARA 601
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
TEELRLKQETPDPP+AL+ VPSL+L DIPKEPI VPTEVGDINGVKVL++DLFTN++LYT
Sbjct: 602 TEELRLKQETPDPPDALKCVPSLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYT 661
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
EVVFDM S+K ELL LIPLFCQSL EMGT+DL+FVQL+QLIGRKTGGISVYP TSS++G+
Sbjct: 662 EVVFDMGSVKHELLQLIPLFCQSLLEMGTQDLTFVQLNQLIGRKTGGISVYPLTSSVYGR 721
Query: 445 EDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGH 504
+DPC ++VRGK+M G+AEDLFNL NCVLQEV+ TDQQRFKQFVSQS+ARMENRLRGSG
Sbjct: 722 DDPCSKIIVRGKSMVGRAEDLFNLMNCVLQEVRFTDQQRFKQFVSQSRARMENRLRGSGQ 781
Query: 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREG 564
GIAAARMDA LN AGW+SEQMGG+SYLEFL LE+KVDQDW GISSSLEEIRRSFLSR G
Sbjct: 782 GIAAARMDAMLNVAGWMSEQMGGLSYLEFLHTLEQKVDQDWEGISSSLEEIRRSFLSRNG 841
Query: 565 CLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKA 624
C++NMTADGK+L N+E++VGKFLD+LP N E V W A LP NEAIVIPTQVNYVGKA
Sbjct: 842 CIVNMTADGKSLTNTEKYVGKFLDLLPENPSGELVTWDARLPLRNEAIVIPTQVNYVGKA 901
Query: 625 ANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQL 684
NI+ +GYKL+GS+YVISKHISN WLWDRVRVSGGAYGG CDFDSHSGV P L
Sbjct: 902 GNIYSSGYKLDGSSYVISKHISNTWLWDRVRVSGGAYGGSCDFDSHSGVFSFLSYRDPNL 961
Query: 685 VKN 687
+K
Sbjct: 962 LKT 964
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 182/205 (88%), Positives = 194/205 (94%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYP+KEPFVELLKGSL+TFLN
Sbjct: 134 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPMKEPFVELLKGSLHTFLN 193
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
AFTYPDRTCYPVASTN KDFYNLVDVY DAVFFPKCV+D TFQQEGWH++L++PSEDI+
Sbjct: 194 AFTYPDRTCYPVASTNKKDFYNLVDVYLDAVFFPKCVDDVHTFQQEGWHYELNDPSEDIS 253
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
YKGVVFNEMKGVYSQPDNILGR QQAL P+N YGVDSGGDPK IPKLTFE+FKEFHR+Y
Sbjct: 254 YKGVVFNEMKGVYSQPDNILGRVTQQALCPENTYGVDSGGDPKDIPKLTFEKFKEFHRQY 313
Query: 181 YHPSNARIWFYGDDDPNERLRILSE 205
YHPSNARIWFYGDDDP RLR+LSE
Sbjct: 314 YHPSNARIWFYGDDDPVHRLRVLSE 338
>sp|Q9LJL3|PREP1_ARATH Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=PREP1 PE=1 SV=2
Length = 1080
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/483 (78%), Positives = 423/483 (87%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EASMNTIEFSLRENNTGSFPRGLSLML+S+ KWIYDM+PFEPLKY +PL ALK R+AEEG
Sbjct: 483 EASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRIAEEG 542
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
SKAVFSPLIEK ILNN H VT+EMQPDPEKA+++E EK IL KVK++MT+EDLAELARA
Sbjct: 543 SKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARA 602
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
TEEL+LKQETPDPPEALR VPSL+L DIPKEP VPTEVGDINGVKVL+HDLFTND++YT
Sbjct: 603 TEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYT 662
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
EVVFD+ SLK ELLPL+PLFCQSL EMGTKDL+FVQL+QLIGRKTGGISVYP TSS+ GK
Sbjct: 663 EVVFDIGSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVRGK 722
Query: 445 EDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGH 504
++PC ++VRGK+MAG+A+DLFNL NC+LQEVQ TDQQRFKQFVSQS+ARMENRLRGSGH
Sbjct: 723 DEPCSKIIVRGKSMAGRADDLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGH 782
Query: 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREG 564
GIAAARMDA LN AGW+SEQMGG+SYLEFL LE+KVD+DW GISSSLEEIRRS L+R G
Sbjct: 783 GIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDEDWEGISSSLEEIRRSLLARNG 842
Query: 565 CLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKA 624
C++NMTADGK+L N E+ V KFLD+LP N V W LP NEAIVIPTQVNYVGKA
Sbjct: 843 CIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLVTWDGRLPLRNEAIVIPTQVNYVGKA 902
Query: 625 ANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQL 684
NI+ TGY+L+GSAYVISKHISN WLWDRVRVSGGAYGGFCDFDSHSGV P L
Sbjct: 903 GNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDSHSGVFSYLSYRDPNL 962
Query: 685 VKN 687
+K
Sbjct: 963 LKT 965
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 182/205 (88%), Positives = 195/205 (95%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
MSVSN+DENKVFG+VFRTPPKDSTGIPHILEHSVLCGSRKYP+KEPFVELLKGSL+TFLN
Sbjct: 135 MSVSNEDENKVFGVVFRTPPKDSTGIPHILEHSVLCGSRKYPVKEPFVELLKGSLHTFLN 194
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
AFTYPDRTCYPVASTNTKDFYNLVDVY DAVFFPKCV+D TFQQEGWH++L++PSEDI+
Sbjct: 195 AFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVDDAHTFQQEGWHYELNDPSEDIS 254
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
YKGVVFNEMKGVYSQPDNILGR AQQAL P+N YGVDSGGDPK IP LTFEEFKEFHR+Y
Sbjct: 255 YKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQY 314
Query: 181 YHPSNARIWFYGDDDPNERLRILSE 205
YHPSNARIWFYGDDDP RLR+LSE
Sbjct: 315 YHPSNARIWFYGDDDPVHRLRVLSE 339
>sp|Q46205|HYPA_CLOPE Protein HypA OS=Clostridium perfringens (strain 13 / Type A)
GN=hypA PE=4 SV=2
Length = 973
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 159/213 (74%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + ++D+NK F I FRTPP++STG+PHILEHSVLCGSRK+ KEPFVELLKGSLNTFLN
Sbjct: 40 IKILSEDDNKCFAIGFRTPPENSTGVPHILEHSVLCGSRKFNTKEPFVELLKGSLNTFLN 99
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
A TYPD+T YPVAS N KDF NL+DVY DAV +P + + F QEGWH+ ++N +++
Sbjct: 100 AMTYPDKTIYPVASRNEKDFMNLMDVYLDAVLYPNIYKHKEIFMQEGWHYYIENKEDELK 159
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
Y GVV+NEMKG YS PD+IL R Q ++PD Y + SGGDP IP LT+EEF EFH+KY
Sbjct: 160 YNGVVYNEMKGAYSSPDSILYRKIPQTIYPDTCYALSSGGDPDEIPNLTYEEFVEFHKKY 219
Query: 181 YHPSNARIWFYGDDDPNERLRILSEASMNTIEF 213
YHPSN+ I+ YG+ D + L ++E + E+
Sbjct: 220 YHPSNSYIFLYGNGDTEKELEFINEEYLKNFEY 252
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 252/475 (53%), Gaps = 8/475 (1%)
Query: 203 LSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAE 262
L EAS+N +EF LRE + GS+P GL L+ M W+YD +P+ L+YEK L +K+ L
Sbjct: 383 LIEASINRVEFELREGDYGSYPNGLIYYLKVMDSWLYDGDPYVHLEYEKNLEKIKSAL-- 440
Query: 263 EGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELA 322
+ F LIE+Y++NN H V + P+ + A K+ L ++K+S ++ L E+
Sbjct: 441 --TSNYFEDLIERYMINNTHSSLVSLHPEKGINEKKSAELKKKLEEIKNSFDEKTLNEII 498
Query: 323 RATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVL 382
++L+ +Q TPD E L S+P LSL DI KE ++PTE +I+G+ L HD TN +
Sbjct: 499 DNCKKLKERQSTPDKKEDLESIPMLSLEDIDKEATKIPTEEKEIDGITTLHHDFHTNKID 558
Query: 383 YTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFT-SSI 441
Y F+ +S+ ++L+P + L C L + GT++ + +L I TGGIS T +++
Sbjct: 559 YVNFFFNTNSVPEDLIPYVGLLCDILGKCGTENYDYSKLSNAINISTGGISFGAITFANL 618
Query: 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRG 501
+ + + KA++ + L + ++ L D R Q + + +AR+E +
Sbjct: 619 KKNNEFRPYLEISYKALSSKTNKAIELVDEIVNHTDLDDMDRIMQIIREKRARLEGAIFD 678
Query: 502 SGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLS 561
SGH IA ++ + G E++ G+ Y +FL +E+ + + IS SL+++R +
Sbjct: 679 SGHRIAMKKVLSYSTNRGAYDEKISGLDYYDFLVNIEK--EDKKSTISDSLKKVRDLIFN 736
Query: 562 REGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYV 621
+ LI+ + + +N + V K+L N+ E+ ++ L NE ++ V YV
Sbjct: 737 KGNMLISYSGKEEEYENFKEKV-KYLISKTNNNDFEKEEYNFELGKKNEGLLTQGNVQYV 795
Query: 622 GKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVILI 676
K N GYK +G+ ++ + +LW+ VRV GGAYG F +F G ++
Sbjct: 796 AKGGNYKTHGYKYSGALSLLESILGFDYLWNAVRVKGGAYGVFSNFRRDGGAYIV 850
>sp|Q7ZVZ6|PREP_DANRE Presequence protease, mitochondrial OS=Danio rerio GN=pitrm1 PE=2
SV=1
Length = 1023
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 153/228 (67%), Gaps = 7/228 (3%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + DD N +F ++FRT P DSTG+PHILEH+VLCGS+++P ++PF ++L SL+TF+N
Sbjct: 72 LHAARDDSNNLFSVLFRTTPMDSTGVPHILEHTVLCGSQRFPCRDPFFKMLNRSLSTFMN 131
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDN---PSE 117
AFT D T YP ++ N KDF NL+ VY DAVFFP C+ + F QEGW + +N PS
Sbjct: 132 AFTASDYTMYPFSTQNAKDFQNLLSVYLDAVFFP-CLRELD-FWQEGWRLEHENPTDPSS 189
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+ +KGVVFNEMKGV+S + + + Q L PD+ Y V SGG+P IP+LT+E+ K FH
Sbjct: 190 PLVFKGVVFNEMKGVFSDNERLYAQHLQNKLLPDHTYSVVSGGEPLAIPELTWEQLKHFH 249
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPR 225
+YHPSNAR + YGD + L+ + E +M+ +F E NT P+
Sbjct: 250 ATHYHPSNARFFTYGDLPLEQHLQQIEEEAMS--KFERTEPNTAVPPQ 295
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 181/417 (43%), Gaps = 24/417 (5%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ IE ++ +T SF GL+L W +D +P + LK + + + L E
Sbjct: 421 EALLHKIEIQMKHQST-SF--GLALASYIASLWNHDGDPVQLLKISESVSRFRQCLKE-- 475
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
+ ++ Y NN H +T+ M PD + AE++ L + ++ ED ++
Sbjct: 476 NPRYLQEKVQHYFKNNTHQLTLSMSPDERFLEKQAEAEEQKLQQKIQILSSEDRKDIYEK 535
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPI--RVPTEVGDINGVKVLQHDLFTNDVL 382
+L Q T L P+L + DI EPI P + G GV V + TN ++
Sbjct: 536 GLQLLAVQSTTQDASCL---PALKVSDI--EPIIPYTPVQPGAAGGVPVQYCEQPTNGMV 590
Query: 383 YTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442
Y + +++SL ++L +PLFC + +MG+ L + Q Q I KTGG+SV P I
Sbjct: 591 YFRAMSNINSLPEDLKIYVPLFCSVITKMGSGMLDYRQQAQRIELKTGGLSVSP--QIIP 648
Query: 443 GKEDPCCC---MVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRL 499
ED +++ + D+F L++ + + D++R + V S + N +
Sbjct: 649 DTEDLDLYEQGIILSSSCLERNLPDMFQLWSDLFNSPRFDDEERLRVLVMMSAQELSNGI 708
Query: 500 RGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSF 559
SGH A R L + E G+ ++F++ + E D I L I+R
Sbjct: 709 SYSGHMYAMTRAARSLTPTADLQESFSGMDQVKFMKRIAEMT--DLTSILRKLPRIKRHL 766
Query: 560 LSREGCLINMTADGKNLKN----SERFVGKFLDMLPTNSPVE-RVKWKAHLPSANEA 611
+ E + A + + + ERF+G PV V +A P A A
Sbjct: 767 FNPENMRCALNATPQKMPDVAAEVERFIGNIAGNRKERKPVRPSVVERALGPEAGAA 823
>sp|Q5JRX3|PREP_HUMAN Presequence protease, mitochondrial OS=Homo sapiens GN=PITRM1 PE=1
SV=2
Length = 1037
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 147/215 (68%), Gaps = 5/215 (2%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ +D N +F + FRT P DSTG+PHILEH+VLCGS+KYP ++PF ++L SL+TF+N
Sbjct: 77 LHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMN 136
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
AFT D T YP ++ N KDF NL+ VY DA FFP C+ + F QEGW + +NPS+ T
Sbjct: 137 AFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFP-CLRELD-FWQEGWRLEHENPSDPQT 194
Query: 121 ---YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+KGVVFNEMKG ++ + I + Q L PD+ Y V SGGDP IP+LT+E+ K+FH
Sbjct: 195 PLVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFH 254
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212
+YHPSNAR + YG+ + L+ + E +++ +
Sbjct: 255 ATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQ 289
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 214/521 (41%), Gaps = 53/521 (10%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ IE ++ +T SF GL L W +D +P E LK L + L E
Sbjct: 426 EALLHKIEIQMKHQST-SF--GLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE-- 480
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
+ +++Y NN H +T+ M+PD + + E L + +++ D ++
Sbjct: 481 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK 540
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDI----PKEPIRVPTEVGDINGVKVLQHDLFTND 380
ELR +Q P L P+L + DI P + V GDI Q TN
Sbjct: 541 GLELRSQQSKPQDASCL---PALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQP---TNG 594
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS 440
++Y +++L +EL P +PLFC L ++G L + + Q I KTGG+S P
Sbjct: 595 MVYFRAFSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLP 654
Query: 441 IHGKEDPCCCMVVRGK-AMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRL 499
D V+ + D+ L++ + +++ FK V + + N +
Sbjct: 655 DDSHMDTYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGI 714
Query: 500 RGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSF 559
SGH A+ R L AG + E G+ + ++ + E D I L I++
Sbjct: 715 PDSGHLYASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMT--DIKPILRKLPRIKKHL 772
Query: 560 LSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWK---------------AH 604
L+ + ++ A + + +E+ V FL + S ER + AH
Sbjct: 773 LNGDNMRCSVNATPQQMPQTEKAVEDFLRSI-GRSKKERRPVRPHTVEKPVPSSSGGDAH 831
Query: 605 LPSANEAI------------------VIPTQVNYVGKAANIFETGYKLNGSAYVISKHIS 646
+P ++ I ++P VNYVG+ + S ++++ ++
Sbjct: 832 VPHGSQVIRKLVMEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMT 891
Query: 647 NVWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQLVKN 687
+L +R GGAYGG SH+G+ ++ P ++
Sbjct: 892 AKFLHTEIREKGGAYGGGAKL-SHNGIFTLYSYRDPNTIET 931
>sp|Q6PF24|PREP_XENLA Presequence protease, mitochondrial OS=Xenopus laevis GN=pitrm1
PE=2 SV=1
Length = 1027
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 137/196 (69%), Gaps = 5/196 (2%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ V+ +D N +F + FRT P DSTG+PHILEH+VLCGS+KYP ++PF ++L SL+TF+N
Sbjct: 71 LHVAREDSNNLFSVQFRTTPLDSTGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMN 130
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSE--- 117
AFT D T YP ++ N KDF NL+ VY DAVFFP C+ + F QEGW + +NP +
Sbjct: 131 AFTASDYTMYPFSTQNAKDFQNLLSVYLDAVFFP-CLRELD-FWQEGWRLEHENPEDPNS 188
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+ +KG+VFNEMKG ++ + + + Q L PD+ Y V SGG+P IP LT+E+ KEFH
Sbjct: 189 PLIFKGIVFNEMKGAFTDNEKVFSQHLQNKLLPDHTYSVVSGGEPLNIPDLTWEQLKEFH 248
Query: 178 RKYYHPSNARIWFYGD 193
+YHPSNAR + YG+
Sbjct: 249 ATHYHPSNARFFTYGN 264
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 12/402 (2%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ +E ++ +T SF GL+L W ++ +P + LK + + L E
Sbjct: 420 EALLHKLEIQMKHQST-SF--GLTLASYIASCWNHEGDPVDLLKIGDKISRFRQCLKE-- 474
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
+ +++Y N H + + M PD + ++E E+E L + ++++E+ ++
Sbjct: 475 NPKFLQDKVKQYFQVNQHRMMLSMSPDEQHYDKEEQLEEEKLTQKVKALSEEERKQIYEK 534
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
EL Q P + +P+L + DI + E+ V V TN ++Y
Sbjct: 535 GLELISLQSKP---QDFSCLPALKVSDIEPQIPLTDLEIAYAGDVPVQYCTQPTNGMVYF 591
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
V +++L +EL P +PLFC + ++G ++ + Q + TGG+SV P S
Sbjct: 592 RAVSSLNTLPEELKPYVPLFCSVITKLGCGVYNYREQAQQMELTTGGMSVCPHIISDDSS 651
Query: 445 EDPC-CCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSG 503
D ++ + D+ +L++ + D++R + V S M N + SG
Sbjct: 652 LDTYEQGILFSSLCLDRNMPDMMHLWSEIFNSPHFDDEERLRVLVRMSAQEMSNGIPDSG 711
Query: 504 HGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSRE 563
H A+ R L G + E G+ ++ ++ + E D I L IR+ L +
Sbjct: 712 HVYASIRASRTLTPTGELQELFSGMDQVKMIKRIAEM--PDMGSILRKLSRIRKYVLLSD 769
Query: 564 GCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHL 605
++ A + ++ + + + FL + T S ER + H+
Sbjct: 770 NMRCSINAAPQQMETASKEMEHFLTGI-TRSKKERKAIRPHV 810
>sp|Q28BR5|PREP_XENTR Presequence protease, mitochondrial OS=Xenopus tropicalis GN=pitrm1
PE=2 SV=1
Length = 1027
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ V+ +D N +F + FRT P DSTG+PHILEH+VLCGS+KYP ++PF ++L SL+TF+N
Sbjct: 71 LHVAREDSNNLFSVQFRTTPLDSTGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMN 130
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSE--- 117
AFT D T YP ++ N KDF NL+ VY DAVFFP C+ + F QEGW + +NP +
Sbjct: 131 AFTASDYTMYPFSTQNAKDFQNLLSVYLDAVFFP-CLRELD-FWQEGWRLEHENPEDPNS 188
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+ +KG+VFNEMKG ++ + + + Q L PD+ Y V SGG+P IP LT+E+ K+FH
Sbjct: 189 PLIFKGIVFNEMKGAFTDNEKVFSQHLQNKLLPDHTYSVVSGGEPLNIPDLTWEQLKQFH 248
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212
+YHPSNAR + YG+ L+ + E +++ E
Sbjct: 249 ATHYHPSNARFFTYGNLPLEIHLKQIHEDALSKFE 283
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 183/406 (45%), Gaps = 20/406 (4%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ +E ++ +T SF GL+L W ++ +P + LK + + L E
Sbjct: 420 EALLHKLEIQMKHQST-SF--GLTLASYVASCWNHEGDPVDLLKIGDKISRFRECLKE-- 474
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAEL-AR 323
+ +++Y + H +T+ M PD + ++ E E L + ++++E+ ++ +
Sbjct: 475 NPKFLQDKVKQYFQVSQHRMTLSMSPDEQHYDKEAQLEAEKLTQKVKALSEEERKQIYEK 534
Query: 324 ATEELRLKQETPDPPEALRSVPSLSLRDI-PKEPIRV--PTEVGDINGVKVLQHDLFTND 380
E +RL+ + P+ +P+L + DI PK P+ T GD+ Q TN
Sbjct: 535 GLELIRLQSK----PQDASCLPALKVSDIEPKIPLTDLDITYAGDVPVQYCAQP---TNG 587
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS 440
++Y V +++L +EL P +PLFC + ++G ++ + Q + TGG+SV P +
Sbjct: 588 MVYFRAVSSLNTLPEELKPYVPLFCSVITKLGCGVYNYREQAQQMELTTGGMSVCPHIIT 647
Query: 441 IHGKEDPCCCMVVRGK-AMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRL 499
D VV + D+ +L++ + D++R + V S M N +
Sbjct: 648 DDSNLDTYEQGVVFSSLCLDRNLPDMMHLWSEIFNSPHFDDEERLRVLVRMSAQEMSNGI 707
Query: 500 RGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSF 559
SGH A+ R L AG + E G+ ++ ++ + E + I L IR+
Sbjct: 708 PDSGHVYASIRAGRTLTPAGELQELFSGMDQVKMIKRIAEM--PEMGPILRKLSRIRKYV 765
Query: 560 LSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHL 605
L + ++ A + + + + + FL + + S ER + H+
Sbjct: 766 LLSDNMRCSVNATPQQMPVASKEIEHFLAGI-SRSKKERKSIRPHV 810
>sp|Q8K411|PREP_MOUSE Presequence protease, mitochondrial OS=Mus musculus GN=Pitrm1 PE=2
SV=1
Length = 1036
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ +D+N +F + FRT P DSTG+PH+LEH+VLCGS+KYP ++PF ++L SL+TF+N
Sbjct: 77 LHLAREDKNNLFSVQFRTTPMDSTGVPHVLEHTVLCGSQKYPCRDPFFKMLNRSLSTFMN 136
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
A T D T YP ++ N KDF NL+ VY DA FFP C+ + F QEGW + +NP + T
Sbjct: 137 AMTASDYTIYPFSTQNPKDFQNLLSVYLDATFFP-CLRELD-FWQEGWRLEHENPRDPQT 194
Query: 121 ---YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+KGVVFNEMKG ++ + I + Q L PD+ Y V SGGDP IP+LT+E+ K+FH
Sbjct: 195 PLIFKGVVFNEMKGAFTDNERIFSQHLQNKLLPDHTYSVVSGGDPLCIPELTWEQLKQFH 254
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212
+YHPSNAR + YG+ L+ + E +++ +
Sbjct: 255 ATHYHPSNARFFTYGNFQLEGHLKQIHEEALSKFQ 289
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 219/520 (42%), Gaps = 52/520 (10%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ IE + + + SF GL+L W +D +P E L+ L + L E
Sbjct: 426 EALLHKIEIQTK-HQSASF--GLTLTSYIASCWNHDGDPVELLQIGSQLTRFRKCLKE-- 480
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
+ +E+Y NN H +T+ M+PD + + E E L + +S++ D ++
Sbjct: 481 NPKFLQEKVEQYFKNNQHKLTLSMKPDDKYYEKQTQMETEKLEQKVNSLSPADKQQIYEK 540
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDI----PKEPIRVPTEVGDINGVKVLQHDLFTND 380
EL+ +Q L P+L + DI P + + GDI Q TN
Sbjct: 541 GLELQTQQSKHQDASCL---PALKVSDIEPSMPFTKLDIGLAAGDIPVQYCPQP---TNG 594
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS 440
++Y +++L ++L P++PLFC L ++G L++ + Q I KTGG+SV P
Sbjct: 595 MVYFRAFSSLNTLPEDLRPIVPLFCSVLTKLGCGILNYREQAQQIELKTGGMSVTPHVLP 654
Query: 441 IHGKEDPCCCMVVRGK-AMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRL 499
+ D V+ + D+ +L++ + +++ FK V + + N +
Sbjct: 655 DDSQLDTYEQGVLFSSLCLERNLPDMMHLWSEIFNNPCFEEEEHFKVLVKMTAQELSNGI 714
Query: 500 RGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSF 559
SGH AA R L +G + E G+ ++ ++ + E D I L I++
Sbjct: 715 SDSGHLYAALRASKTLTPSGDLQETFSGMDQVKVMKRIAEMT--DIKPILRKLPRIKKYL 772
Query: 560 LSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHL--------PSANEA 611
L+ + ++ A + + +E+ V FL + S ER + H+ PS
Sbjct: 773 LNCDNMRCSVNATPQQMPQAEKEVENFLRNV-GRSKKERKPVRPHIVEKPTPSGPSGAAH 831
Query: 612 I------------------------VIPTQVNYVGKAANIFETGYKLNGSAYVISKHISN 647
+ V+P VNY+G+ + S ++++ ++
Sbjct: 832 VSGSQIVRKLVTDPTFKPCQMKTHFVLPFPVNYIGECVRTVPYADPDHASLKILARLMTA 891
Query: 648 VWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQLVKN 687
+L +R GGAYGG +HSG+ ++ P ++
Sbjct: 892 KFLHTEIREKGGAYGGGAKL-THSGIFTLYSYRDPNSIET 930
>sp|Q5RDG3|PREP_PONAB Presequence protease, mitochondrial OS=Pongo abelii GN=PITRM1 PE=2
SV=1
Length = 1037
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 144/215 (66%), Gaps = 5/215 (2%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ +D N +F + FRT P DSTG+PHILEH+VLCGS+KYP ++PF +L SL+TF+N
Sbjct: 77 LHLAREDTNNLFSVQFRTTPMDSTGVPHILEHTVLCGSQKYPCRDPFFRMLNRSLSTFMN 136
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
AFT D T YP ++ N KDF NL+ VY DA FFP C+ + F QEGW + +NP + T
Sbjct: 137 AFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFP-CLRELD-FWQEGWRLEHENPRDPQT 194
Query: 121 ---YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+KGVVFNEMKG ++ + I + Q L PD+ Y V SGGDP I +LT+E+ K+FH
Sbjct: 195 ALVFKGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCILELTWEQLKQFH 254
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212
+YHPSNAR + YG+ + L+ + E +++ +
Sbjct: 255 ATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQ 289
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 215/521 (41%), Gaps = 53/521 (10%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ IE ++ +T SF GL L W +D +P E LK L + L E
Sbjct: 426 EALLHKIEIQMKHQST-SF--GLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE-- 480
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
+ +++Y NN H +T+ M+PD + + E L + +++ D ++
Sbjct: 481 NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEK 540
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDI----PKEPIRVPTEVGDINGVKVLQHDLFTND 380
ELR +Q P L P+L + DI P + V GDI Q TN
Sbjct: 541 GLELRTQQSKPQDASCL---PALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQP---TNG 594
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS 440
++Y +++L +EL P +PLFC L ++G L + + Q I KTGG+S P
Sbjct: 595 MVYFRAFSSLNTLPEELRPYVPLFCSVLTKLGCGLLDYREQAQQIELKTGGMSASPHVLP 654
Query: 441 IHGKEDPCCCMVVRGK-AMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRL 499
D V+ + D+ +L++ + +++ FK V + + N +
Sbjct: 655 DDSHMDTYEQGVLFSSLCLDRNLPDMMHLWSEIFNNPCFEEEEHFKVLVKMTAQELTNAI 714
Query: 500 RGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSF 559
SGH A+ R L AG + E G+ + ++ + E D I L I++
Sbjct: 715 PDSGHLYASIRAGRTLTPAGDLQETFSGMDRVRLMKRIAEMT--DIKPILRKLPRIKKHL 772
Query: 560 LSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWK---------------AH 604
L+ + ++ A + + +E+ V FL + S ER + AH
Sbjct: 773 LNGDNMRCSVNATPQQMSQTEKAVEDFLRSI-GRSKKERRPVRPHTVEKPVPSSSGGDAH 831
Query: 605 LPSANEAI------------------VIPTQVNYVGKAANIFETGYKLNGSAYVISKHIS 646
+P ++ I ++P VNYVG+ + S ++++ ++
Sbjct: 832 VPHGSQIIRKLVTEPTFKPWQMKTHFLMPFPVNYVGECIRTVPYMDPDHASLKILARLMT 891
Query: 647 NVWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQLVKN 687
+L +R GGAYGG SH+G+ ++ P ++
Sbjct: 892 AKFLHTEIREKGGAYGGGAKL-SHNGIFSLYSYRDPNTIET 931
>sp|O42908|CYM1_SCHPO Mitochondrial presequence protease OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cym1 PE=3 SV=1
Length = 882
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 135/222 (60%), Gaps = 8/222 (3%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + +D N VF I F+TP ++ GIPHILEH+ LCGS KYP+++PF ++L SL TF+N
Sbjct: 64 IHLDREDPNSVFSIGFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMN 123
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFK---LDNPSE 117
AFT D T YP A+ NT D+ NL DVY DA FPK + F QEGW F+ +++
Sbjct: 124 AFTASDFTFYPFATVNTTDYKNLRDVYLDATLFPKLRK--LDFLQEGWRFEHADVNDKKS 181
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
I + GVV+NEMKG S I QQ LF AYG +SGGDP IP L +EE +FH
Sbjct: 182 PIIFNGVVYNEMKGQVSDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKFH 241
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENN 219
R +YHPSNA+I YG + L LSE FS RE N
Sbjct: 242 RSHYHPSNAKILSYGSFPLEDNLSALSETFR---PFSKRELN 280
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 208/487 (42%), Gaps = 24/487 (4%)
Query: 197 NERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMAL 256
NE+L EA ++ +E SL+ + + F GL+ L W +P + L + K + L
Sbjct: 407 NEKL----EAILHQMEISLK-HKSAHFGIGLAQSLPF--NWFNGADPADWLSFNKQIEWL 459
Query: 257 KARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKE 316
K + ++ +F LI+KYIL N M P R + AE + L + S +T E
Sbjct: 460 KQKNSD---GKLFQKLIKKYILENKSRFVFTMLPSSTFPQRLQEAEAKKLQERTSKLTDE 516
Query: 317 DLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDL 376
D+AE+ + + +L Q TP L P+LS+ DIP+ + DI G+K +DL
Sbjct: 517 DIAEIEKTSVKLLEAQSTPADTSCL---PTLSVSDIPETIDETKLKFLDIAGMKAQWYDL 573
Query: 377 FTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYP 436
+ Y ++ + + + L+P +P++C + +GT S L+ I R TGGIS+ P
Sbjct: 574 -AAGLTYIRLLLPLKNFPESLIPYLPVYCDACLNLGTHSESIGDLEHQIRRYTGGISISP 632
Query: 437 FTSSIHGKEDPC---CCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKA 493
S++ D + + G A+ L L N L++ + + S +
Sbjct: 633 --SAVTNNSDVSKYELGIAISGYALDKNVGKLVELINKAFWNTNLSNTDKLAIMLKTSVS 690
Query: 494 RMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLE 553
+ + + GH A + L I+EQ+GG++ ++ L L ++ + + L
Sbjct: 691 GITDGIAEKGHSFAKVSSASGLTEKTSITEQLGGLTQVKLLSQLSR--EESFGPLVEKLT 748
Query: 554 EIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVE---RVKWKAHLPSANE 610
IR G + A + E+ + KF+ N + K + + S
Sbjct: 749 AIREILRGTSGFKAAINASPTQHEVVEKALQKFMKSRGVNQQTQTKSTSKERNGINSIKT 808
Query: 611 AIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSH 670
+P Q + K+ + ++S +++ +L +R GGAYG +
Sbjct: 809 YHELPFQTYFAAKSCLGVPYTHPDGAPLQILSSLLTHKYLHGEIREKGGAYGAGLSYSGI 868
Query: 671 SGVILIF 677
GV+ F
Sbjct: 869 DGVLSFF 875
>sp|Q9V9E3|PREP_DROME Presequence protease, mitochondrial OS=Drosophila melanogaster
GN=CG3107 PE=2 SV=2
Length = 1034
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 5/206 (2%)
Query: 3 VSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAF 62
+ +D N VF I FRT P DSTG+PHILEH LCGS+KYP+++PF ++L S+ TF+NA
Sbjct: 103 IDRNDSNNVFSINFRTTPFDSTGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFMNAM 162
Query: 63 TYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFK---LDNPSEDI 119
T PD T YP ++ N DF NL +Y DAVF P + F QEGW + + + +
Sbjct: 163 TGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLA--YFDFLQEGWRLENKDIFDKQSKL 220
Query: 120 TYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRK 179
KGVV+NEMKG +S+ + + +FPD+ Y SGG+P IPKL + + EFH+K
Sbjct: 221 VIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDHTYRHVSGGNPLEIPKLAYNDLVEFHKK 280
Query: 180 YYHPSNARIWFYGDDDPNERLRILSE 205
YYHPSNARI+ YG D ++ L +L E
Sbjct: 281 YYHPSNARIYSYGLFDASKTLALLDE 306
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 211/495 (42%), Gaps = 36/495 (7%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
E+ ++ +E SL+ N G +L+ S W +D + L+ + L+ +++
Sbjct: 451 ESVLHNLELSLKHQNPNF---GNTLLFNSTALWNHDGDVVSNLRVSDMISGLRESISQ-- 505
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEIL---AKVKSSMTKEDLAEL 321
+K F IEKY NN H +T+ M PD + + AE E++ K+ + E + E
Sbjct: 506 NKKYFQEKIEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYER 565
Query: 322 ARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDV 381
+ + + D +P L++ D+ P + ++ V+ + TN++
Sbjct: 566 GLILDSYQKAESNTDL------LPCLTMNDVRDPPKWPKLFIQNVQNVRTQICKVPTNEI 619
Query: 382 LYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSI 441
Y + +F+++ L E L+PLFC + MGT + ++ + D+ I KTGG F +
Sbjct: 620 TYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYREFDKHILLKTGG-----FDFKL 674
Query: 442 HGKEDP------CCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARM 495
H ED +++ A+ ++F L +++ V+ D +R K + + +
Sbjct: 675 HLIEDVRDSKSYSLSVMINTHALNNNVPEMFALCQELIKNVRFDDSERLKMLIENYISYI 734
Query: 496 ENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEI 555
+ SGH A +++ AG + + GV +++F++ I L I
Sbjct: 735 SVGVASSGHLYAMLGATSQVCDAGKLKSLLYGVDHIDFMKNFVHSTST--VDICDKLSTI 792
Query: 556 RRSFLSREGC--LINMTA--DGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEA 611
+++ IN T + + N E KFL+ LPT + + +L + +
Sbjct: 793 ASKVFNKDNMRGAINTTQSYEPSAISNYE----KFLESLPTFGKTQTSRNIHYLDPSCQQ 848
Query: 612 IVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHS 671
V+ VNY KA ++ + + V++K +S +L +R GAYG S
Sbjct: 849 YVMNIPVNYCAKALFTVPYLHQDHPTLRVLAKLLSAKYLLPVIREKNGAYGAGAKISS-D 907
Query: 672 GVILIFILSGPQLVK 686
G+ + P K
Sbjct: 908 GIFSFYSYRDPNSTK 922
>sp|Q6FUI7|CYM1_CANGA Mitochondrial presequence protease OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CYM1 PE=3 SV=1
Length = 990
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 124/195 (63%), Gaps = 8/195 (4%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + DD+N VF I FRT P D+TG+PHILEH+ LCGS KYP+++PF ++L SL F+N
Sbjct: 57 LHIDRDDKNNVFSIAFRTLPPDATGVPHILEHTTLCGSEKYPVRDPFFKMLNKSLANFMN 116
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGW---HFKLDNPSE 117
A T PD T +P A+TN +DF NL DVY ++ P E Q F QEGW H ++ NP
Sbjct: 117 AMTGPDYTFFPFATTNARDFVNLRDVYLNSTLRPLLKE--QDFYQEGWRLEHSEVTNPKS 174
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
DI +KGVVFNEMKG S D QQ ++P +SGGDP+ I L +++ +FH
Sbjct: 175 DIIFKGVVFNEMKGQVSNADYHFWSQFQQNIYPSLN---NSGGDPQKITDLHYQDLVDFH 231
Query: 178 RKYYHPSNARIWFYG 192
YHPSNAR + YG
Sbjct: 232 HANYHPSNARTFTYG 246
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 137/606 (22%), Positives = 260/606 (42%), Gaps = 55/606 (9%)
Query: 95 KCVED---FQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPD 151
KC E ++TF + L + + I YKG++ + + +S + A L
Sbjct: 308 KCGEPTDLYETFLLKILGNLLLDGHDSIMYKGLIESGLGHDFSVNTGVESMTAANFL--- 364
Query: 152 NAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTI 211
G+ + + F+ FKEF D D N+ +A ++ +
Sbjct: 365 -TVGIQGSQNVEEFKSKVFDLFKEF-------------IENDVDSNK-----VDAIIHQL 405
Query: 212 EFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSP 271
E S +++ F GL ++ + W ++P E L++++ + LK+ E G+K +F
Sbjct: 406 ELS-KKDQKADF--GLQILYSILPGWTNGIDPIEGLEFDELIGRLKSDFKENGTK-IFKN 461
Query: 272 LIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLK 331
+++KYI++ P+ M+ E +S+ A E L K + + D + E L
Sbjct: 462 ILDKYIIDQPY-FHFTMKGSEEFSSKLAAEESTKLDKKLKELDETDRKAIF---ERGLLL 517
Query: 332 QETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDIN-GVKVLQHDLFTNDVLYT---EVV 387
+ + E L +P+L + DI ++ + D+N + + TN + Y +++
Sbjct: 518 EAAQNHKEDLSCLPTLGVADISRK-----VDTYDLNTNANITVRNTATNGISYIRGKKLI 572
Query: 388 FDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDP 447
DM L EL P + LF SL +GTK + +D I TGGIS ++ P
Sbjct: 573 NDMIPL--ELYPFLSLFAASLTHLGTKTTPYGAIDNEIKLHTGGISTNISVNADPTTLQP 630
Query: 448 CCCMVVRGKAMAGQAEDLFNLFNCVLQEVQL-TDQQRFKQFVSQSKARMENRLRGSGHGI 506
+ G ++ +++ +FN +L E T + + K ++ + + + SGH +
Sbjct: 631 NLYFDMSGFSLNEKSDYIFNFLKTILMETDFSTHKDKLKVLINSIASSNTSHIADSGHTV 690
Query: 507 AAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQD---WAGISSSLEEIRRSFLSRE 563
A + L+T I E + GV + + + L ++ D + + L ++R ++ +
Sbjct: 691 ARSFASGHLSTVAAIQEHISGVEHYKLISRLCSIMNDDKLFQSEVIDKLVMLQRIIVNSQ 750
Query: 564 GCLINMTADGKNLKNSERF-VGKFLDMLP-TNSPVERVKWKAHLPSANEAIVI-----PT 616
+ D + +N R V F+ LP T+S + A +P +++ V+ P
Sbjct: 751 NMEFFASVDCQAQENKIRKEVDYFVSTLPNTSSDISGAIQTACVPRYSDSQVLNLIKFPF 810
Query: 617 QVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVILI 676
QV+Y +A N +K + V++ ++ L +R GGAYGG F + SG+
Sbjct: 811 QVHYTAQAYNGVSYTHKDGAALQVLANMLTFKHLHKEIREKGGAYGGGATFSALSGIFSY 870
Query: 677 FILSGP 682
+ P
Sbjct: 871 YSYRDP 876
>sp|Q6CWW6|CYM1_KLULA Mitochondrial presequence protease OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CYM1 PE=3 SV=1
Length = 982
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 130/208 (62%), Gaps = 8/208 (3%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + DD N VF I F+T P DSTG+PHILEH+ LCGS KYP+++PF ++L SL F+N
Sbjct: 57 LHIDRDDNNNVFSIGFKTNPPDSTGVPHILEHTTLCGSHKYPVRDPFFKMLNRSLANFMN 116
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGW---HFKLDNPSE 117
A T D T YP A+TN DF NL DVY DA P + Q F QEGW H K+D+P+
Sbjct: 117 AMTGHDYTFYPFATTNETDFANLRDVYLDATLNPLLNQ--QDFLQEGWRLEHTKVDDPNS 174
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
DI +KGVV+NEMKG S + Q++ +P +SGGDP + L +E+ FH
Sbjct: 175 DIGFKGVVYNEMKGQVSNANYYFWIKFQESYYPSLN---NSGGDPTKMTDLQYEDLISFH 231
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSE 205
R YHPSNA+ + YG+ D N L+ L++
Sbjct: 232 RNNYHPSNAKTFTYGNFDLNNTLQRLNK 259
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 199/486 (40%), Gaps = 38/486 (7%)
Query: 187 RIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEP 246
++W +P E RI +A + +E S +++ F GL L+ + W+ +PF+
Sbjct: 383 KVWEEVLQNPFEESRI--QAIIQQLELS-KKDQRADF--GLQLLYSVLPGWVNKTDPFDS 437
Query: 247 LKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEIL 306
L +++ L + A +G +F LI++++++ P M+ + + +A E+E L
Sbjct: 438 LLFDETLERFQEDWATKGDN-LFKDLIKEFVISKP-VFKFTMKGSETFSQKLDAEEQERL 495
Query: 307 AKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPK--------EPIR 358
+ + +ED + ++L QE D E L +PSL + IP+ E
Sbjct: 496 ERKLKLLDEEDKKVIFERGKQL---QELQDLKEDLSCLPSLQISAIPRVSKTYPLLEKDN 552
Query: 359 VPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSF 418
V + D NG+ ++ N + +EL P +PL+ SL +GT F
Sbjct: 553 VLNRITDTNGITYVRGKRLLN-----------HHIPRELYPFLPLYADSLTNLGTSTEEF 601
Query: 419 VQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQL 478
+++ I TGG+S + P V G A+ + + +F + +L E
Sbjct: 602 STIEEQIKLHTGGVSTRVSVNPDAQTGKPMLLFQVDGWALNSKTDHIFKFWKKLLCETDF 661
Query: 479 -TDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQAL 537
+++ K + + + +GH A A L+ I+E + G+ L+ + L
Sbjct: 662 HKHKEKLKVLIRSLASSNTASVAETGHAFARNFGAAHLSVTKAINESLNGIEQLQLINKL 721
Query: 538 EEKVDQDW---AGISSSLEEIRRSFLSREGCLINMTADGK-NLKNSERFVGKFLDMLPTN 593
+ +D + + S L E++ +T+D + + + + FL LP +
Sbjct: 722 SQCLDDEALFEKEVVSKLVELQSYINGSSDMKFMITSDSQVQIDAVHQQITGFLSSLPKD 781
Query: 594 S-PVERVKWKAHL---PSANEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVW 649
S P + + P + P QV+Y K + ++S +++ +
Sbjct: 782 SKPCDFYSENYSMLENPGKPTLLQFPFQVHYTAKCYPGVSYTHPDGAKLQILSNMLTHKY 841
Query: 650 LWDRVR 655
L +R
Sbjct: 842 LHREIR 847
>sp|Q7S7C0|CYM1_NEUCR Mitochondrial presequence protease OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=cym-1 PE=3 SV=1
Length = 1012
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 128/206 (62%), Gaps = 18/206 (8%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ DD N VF I F+T P D TG+PHILEH+ LCGS+KYP+++PF ++L +L+ F+N
Sbjct: 58 LHIARDDSNNVFSIGFKTNPPDDTGVPHILEHTTLCGSQKYPIRDPFFKMLPRTLSNFMN 117
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPS---- 116
AFT D T YP A+TN +DF NL+ VY DA P E F QEGW +NP
Sbjct: 118 AFTASDHTFYPFATTNAQDFKNLMSVYLDATLHPLLKE--TDFTQEGWRIGPENPQALVA 175
Query: 117 -------ED--ITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPK 167
ED + +KGVV+NEMKG S + Q +FPD +SGGDP+ I
Sbjct: 176 AEGNAKPEDRKLVFKGVVYNEMKGQMSDAAYLFWIRFQDHIFPDIH---NSGGDPQKITD 232
Query: 168 LTFEEFKEFHRKYYHPSNARIWFYGD 193
LT+++ K+FH +YHPSNA+++ YGD
Sbjct: 233 LTYQQLKKFHADHYHPSNAKVFTYGD 258
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 207/416 (49%), Gaps = 38/416 (9%)
Query: 198 ERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALK 257
ER +I + ++ +E L+ + T +F G+SL+ R KW ++PF+ L + + A +
Sbjct: 408 ERSKI--DGYLHQLELGLK-HKTANF--GMSLLHRLKPKWFVGVDPFDSLAWNDTIAAFE 462
Query: 258 ARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKE------ILAKVKS 311
LA+ G LI+KY++N+ + ++ M P P S++ A E+E I VK+
Sbjct: 463 TELAKGG---YLEGLIDKYLIND-NTLSFTMAPSP-TFSQELAQEEETRLSTKISEVVKA 517
Query: 312 SMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKV 371
+ ++E+ A E L +++ E L +PS+ ++DIP++ V + VK
Sbjct: 518 AGSEEEARAALEARELKLLAEQSKTNTEDLGCLPSVHVKDIPRQKDSVILRHDNTARVKT 577
Query: 372 LQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGG 431
H+ TN + Y + + +L EL LIPLF S+ +GTKD++ QL+ LI KTGG
Sbjct: 578 QWHEAPTNGLTYFRAINQLENLPDELRSLIPLFTDSIMRLGTKDMTMEQLEDLIKLKTGG 637
Query: 432 ISV------YP--FTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTD--- 480
+SV +P FT + G ++ G A+ +F+L ++ E
Sbjct: 638 VSVGYHSASHPTDFTRATEG-------LMFSGMALDRHVPTMFDLLRKLVVETDFDSPQA 690
Query: 481 QQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEK 540
Q+ +Q + S + N + SGH A ++ L ++ EQ+ G+S ++ + +L +
Sbjct: 691 AQQIRQLLQASADGVVNDIASSGHAYARRAAESGLTWDSFLKEQVSGLSQVKLVTSLASR 750
Query: 541 VDQD-WAGISSSLEEIRRSFLSREGCL-INMTADGKNLKNSERFVGKFLDMLPTNS 594
+ D + + L++I++ L+ G L +T D ++ ++ + + F++ LP+ +
Sbjct: 751 PESDPLEDVIAKLKQIQQFALA--GNLRTAITCDSGSVSDNAKALLNFVNSLPSEA 804
>sp|Q4IA56|CYM1_GIBZE Mitochondrial presequence protease OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CYM1 PE=3
SV=1
Length = 1004
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 127/199 (63%), Gaps = 11/199 (5%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ DD N VF I F+T P D TGIPHILEH+ LCGS KYP+++PF ++L +L+ F+N
Sbjct: 57 LHIARDDSNNVFSIGFKTNPPDDTGIPHILEHTTLCGSEKYPIRDPFFKMLPRTLSNFMN 116
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP----- 115
AFT D T YP A+TN +DF NL+ VY D+ P + F QEGW +NP
Sbjct: 117 AFTASDHTFYPFATTNAQDFKNLMSVYLDSTLHPLLKK--SDFTQEGWRIGPENPLAEDE 174
Query: 116 -SEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFK 174
S+ + +KGVV+NEMKG S + +FPD +SGGDP+ I LT+E+ +
Sbjct: 175 ASKKLVFKGVVYNEMKGQMSDAGYLYYIRFHDHIFPDIN---NSGGDPQKITDLTYEQLQ 231
Query: 175 EFHRKYYHPSNARIWFYGD 193
+FH ++YHPSNA+++ YGD
Sbjct: 232 KFHAEHYHPSNAKVFTYGD 250
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 236/521 (45%), Gaps = 54/521 (10%)
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
Y+G++ M +S P+ +A++ +F GV G PK+ K+ + ++ K
Sbjct: 340 YRGLIEAGMGADWS-PNAGYDSSAKKGIFSIGLTGVQEGDVPKLKEKVQ-QILRDARNKG 397
Query: 181 YHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYD 240
+ ++ +I + S++ +E SL+ + T +F G S++ R KW
Sbjct: 398 F----------------DKTKI--DGSLHQLELSLK-HKTANF--GFSMLNRLKPKWFNG 436
Query: 241 MNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEA 300
++PF+ L + + +A++AE LI+KY+LN+ + +T M P
Sbjct: 437 VDPFDSLAWNDTINGFQAKMAEGN---YLEGLIDKYLLND-NTLTFTMAPSTTYGEDLVK 492
Query: 301 AEKE-----ILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKE 355
E+E I A +K + ++E + E+ L ++ E L +P++ ++DIP+
Sbjct: 493 EEQERLSTRIQAAIKEAGSEEKARKHFEKQEQELLVEQNKTNTEDLGCLPTVHVKDIPRS 552
Query: 356 PIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKD 415
V + NG K+ H+ TN + Y + + +L EL L+PLF S+ +GTKD
Sbjct: 553 KEAVVVRDENANGTKIQWHEAPTNGLTYFRAINTLENLPDELRELVPLFTDSIMRLGTKD 612
Query: 416 LSFVQLDQLIGRKTGGISV-YPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQ 474
L+ QL+ LI KTGG+SV Y T S ++ G A+ +F++ ++
Sbjct: 613 LNMEQLEDLIKLKTGGVSVGYHCTPSPTDFHAASEGIIFTGMALDHNVPVMFDIIQKLVL 672
Query: 475 EVQLTDQQ---RFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYL 531
+ R +Q + S + N + +GH A ++ L + W+ +Q+ G+S +
Sbjct: 673 GTDFDSPEAALRIRQLLQASADGVVNDIASTGHRFAMGSAESGLTRSAWLRQQVSGLSQV 732
Query: 532 EFLQALEEKVDQD-WAGISSSLEEIRRSFLSREGCLINMT-------ADGKNLKNSERFV 583
+ + +L + + D + S L++I+ L +T A+G +L+N FV
Sbjct: 733 QLVTSLASRPETDKLEDVISKLKQIQNLALVGGNLRTAITCGSESVAANGASLQN---FV 789
Query: 584 GKF-LDMLPTNSPVERVKWKAHLPSANEAIV-IPTQVNYVG 622
G D L +P R LP ++ +P QV Y G
Sbjct: 790 GNLSRDPLNLKNPSPR-----QLPKDSKTFYPLPYQVYYGG 825
>sp|Q759T9|CYM1_ASHGO Mitochondrial presequence protease OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CYM1
PE=3 SV=2
Length = 990
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 164/295 (55%), Gaps = 28/295 (9%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + +D+N VF + FRTPP D+TG+PHILEH+ LCGS+KYP+++PF ++L SL F+N
Sbjct: 57 LHLEREDQNNVFSVGFRTPPPDATGVPHILEHTTLCGSQKYPVRDPFFKMLNRSLANFMN 116
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGW---HFKLDNPSE 117
A T D T YP A+TN KDF NL D+Y DA P + F QEGW H + + S
Sbjct: 117 AMTAHDHTFYPFATTNQKDFANLRDLYLDATLRP--LLRHADFLQEGWRLEHRDVGDASS 174
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
++ +KGVV+NEMKG S D Q+A++P +SGGDP+ I L++E+ FH
Sbjct: 175 ELVFKGVVYNEMKGQVSNADYYFWIRFQEAIYPALH---NSGGDPEHITDLSYEDLVAFH 231
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEA----------SMNTIEFSLRENNTGSFPRGL 227
+ +YHPSNA+ + YG+ + LR L + M+ LRE + P +
Sbjct: 232 QNHYHPSNAKTFTYGNFPLRDTLRKLDDEFRGFGRRAIPQMHEKPLQLREAVSVEEPCQI 291
Query: 228 SLML------RSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG-SKAVFSPLIEK 275
ML R+ WI NP + YE L+ + L +G S A + L+E+
Sbjct: 292 DPMLPADKQCRTSMTWICG-NPND--VYETFLLKILGSLLFDGHSSAFYKKLVEE 343
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 24/386 (6%)
Query: 196 PNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMA 255
P E+ R+ EA ++ +E S +++ F GL L+ + W+ + +PF+ L L
Sbjct: 393 PFEKHRV--EAILHQLELS-KKDQKSDF--GLQLLYGILPGWVNNTDPFDLLSLNSALQR 447
Query: 256 LKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTK 315
+A EG +F L+ KY++ P + +D+ + ++ AKV SS+T+
Sbjct: 448 FRADWDREGD-GLFQRLLNKYVIGKPSFTFTMVGSSDFNQVKDQNEQSKLKAKV-SSLTE 505
Query: 316 EDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHD 375
D + + L QE + + L +P+L+ DIP V + Q D
Sbjct: 506 SDKEVIYKRGLHL---QELQNSEQDLSKLPTLTTADIPHSSGHY--FVSRDGPITTRQTD 560
Query: 376 LFTNDVLYTEVVFDM-SSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISV 434
TN + Y + + ++ + P IPL+ L +GT +++ I TGGISV
Sbjct: 561 --TNGITYIRMKRPLKGAIPYDAYPYIPLYSDGLMNIGTLLEDASAIEEQIRLHTGGISV 618
Query: 435 YPFTSSIHGKEDPCCC---MVVRGKAMAGQAEDLFNLFNCVLQEVQLT-DQQRFKQFVSQ 490
+ +H + + + A+ + + +F++ N ++ E L+ ++ K +
Sbjct: 619 ---SIGVHPNVETRLSELYLEISACALNSKTQYVFDIINKIMNETALSVRSEKMKVLIRA 675
Query: 491 SKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQ--DWAGI 548
+ + + +GH +A A + I EQ G+ + + L +++ ++ +
Sbjct: 676 AASSFTSYAAENGHDLARLHTGAHFSQTQAIMEQTAGIEQVRHMNNLMSIIEKEAEFNTV 735
Query: 549 SSSLEEIRRSFLSREGCLINMTADGK 574
+LE + R +G + +T D +
Sbjct: 736 LQNLEAMHRKIFVADGLEVMITTDNR 761
>sp|Q2UGN1|CYM1_ASPOR Mitochondrial presequence protease OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=cym1 PE=3 SV=1
Length = 1025
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 14/202 (6%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ V+ +D+N VFG+ F+T P D+TG+PHILEH+ LCGS KYP+++PF ++L SL+ F+N
Sbjct: 63 LHVAREDKNNVFGVGFKTNPPDATGVPHILEHTTLCGSEKYPVRDPFFKMLPRSLSNFMN 122
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHF---------K 111
AFT D T YP A+TN +DF NL+ VY DA P E + F+QEGW
Sbjct: 123 AFTSADHTTYPFATTNQQDFQNLLSVYLDATLHPLLKE--EDFRQEGWRLGPEDPRASDA 180
Query: 112 LDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFE 171
LD ED+ +KGVV+NEMKG S + + ++++FP +SGGDP+ I LT +
Sbjct: 181 LDGKPEDVLFKGVVYNEMKGQISDANYLYYIKYRESIFPALN---NSGGDPQYITDLTHK 237
Query: 172 EFKEFHRKYYHPSNARIWFYGD 193
+ EF ++ YHPSNA+ YGD
Sbjct: 238 QLVEFSKRNYHPSNAKFLTYGD 259
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 214/489 (43%), Gaps = 28/489 (5%)
Query: 208 MNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKA 267
++ +E +LR + T +F G+ +M +++ W ++P + L + + K R + G
Sbjct: 417 LHQLELALR-HKTANF--GIGVMEKTISSWFNGVDPMKELAWNDVINEFKRRYQQGG--- 470
Query: 268 VFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKS-SMTKEDLAELARATE 326
L++KY++N+ C+T M P E ++E++ K K S E + +A
Sbjct: 471 YLESLMQKYLMND-RCLTFTMVGTP--TFHQELDQQEMVRKEKKLSQLVEQHGSMEKAIS 527
Query: 327 ELR------LKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTND 380
LR LK + L +PSL + DI +E R P ++ V V+ + TN
Sbjct: 528 SLREQELQLLKTQEEAQHADLGCLPSLRVEDISREKERKPVRESKVDDVDVVWREAPTNG 587
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPF-TS 439
+ Y + + L +L L+PLF S+ +GT + + Q + LI KTGG+S F TS
Sbjct: 588 LTYFQALNAFEDLPDDLRLLMPLFNDSVMRLGTANKTMEQWEDLIKLKTGGVSSSAFHTS 647
Query: 440 SIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTD---QQRFKQFVSQSKARME 496
S + G A+ D+ + ++ E T ++ + +
Sbjct: 648 SPTELGKFNEGLQFSGFALDKNIPDMLEILTTLITETDFTSPYAPAMIQELLRLTTNGAL 707
Query: 497 NRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIR 556
+ + SGH A A L+ + W+ EQ G++ L+ L + ++ +E++R
Sbjct: 708 DSVAASGHRFALNAAAAGLSRSFWVQEQQSGLAQLQATANLLRDAETSPERLAELIEKLR 767
Query: 557 --RSF-LSREGCL-INMTADGKNLKNSERFVGKFLDMLP-TNSPVERVKWKAHLPSANEA 611
+SF +S+ L + M + + +E + K+L LP SP S+
Sbjct: 768 LIQSFAISKSSSLRVRMVCEPSSAHQNEVVLQKWLAGLPQIRSPTSVDARSMQQVSSKAF 827
Query: 612 IVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHS 671
+P +V Y G A +K + V+S+ +++ +L +R GGAYG S+
Sbjct: 828 YDMPYKVYYSGLAMQTVPFVHKSSAPLSVLSQLLTHNYLHPEIREKGGAYGAAA---SNG 884
Query: 672 GVILIFILS 680
V IF L+
Sbjct: 885 PVKGIFALT 893
>sp|Q5B6H7|CYM1_EMENI Mitochondrial presequence protease OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cym1 PE=3 SV=1
Length = 1049
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 131/204 (64%), Gaps = 16/204 (7%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ +D+N VFGI F+T P D+TG+PHILEH+ LCGS KYP+++PF ++L SL+ F+N
Sbjct: 86 LHIAREDKNNVFGIGFKTNPPDATGVPHILEHTTLCGSEKYPIRDPFFKMLPRSLSNFMN 145
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPS---- 116
AFT D T YP A+TN +DF NL+ VY DA P E + F+QEGW ++P
Sbjct: 146 AFTSSDHTMYPFATTNQQDFQNLLSVYLDATMHPLLKE--EDFRQEGWRLGPEDPRAIQT 203
Query: 117 -------EDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT 169
EDI +KGVV+NEMKG S + + Q+++FP +SGGDP+ I LT
Sbjct: 204 QEGNLKPEDILFKGVVYNEMKGQMSDANYLYWIRFQESIFPAIN---NSGGDPQHITDLT 260
Query: 170 FEEFKEFHRKYYHPSNARIWFYGD 193
++ EF +K Y+PSNA+I YGD
Sbjct: 261 HKQLVEFSKKNYNPSNAKIITYGD 284
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 211/473 (44%), Gaps = 26/473 (5%)
Query: 208 MNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKA 267
++ +E +LR + T +F GL ++ ++ W +P + L + + + A K+R + G
Sbjct: 441 LHQLELALR-HKTANF--GLGVIQKTFTSWFNGSDPMKELAWNEVINAFKSRYEKGG--- 494
Query: 268 VFSPLIEKYILNNPHCVTVEMQPDP---EKASRDEAAEKEI----LAKVKSSMTKEDLAE 320
L++KY++N+ +C+T M P ++ E A KE L + S+ K + E
Sbjct: 495 YLEALMQKYLIND-NCLTFTMVGTPSFNKELDDKEMARKEKKFEQLTQQHGSVEKA-VTE 552
Query: 321 LARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTND 380
LA+A +L QE + L +PSL + DI ++ P + G ++ + TN
Sbjct: 553 LAKAELQLLEVQEKAQHAD-LSCLPSLRVEDISRQKEHKPVRESKVEGTDIVWREAPTNG 611
Query: 381 VLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPF-TS 439
+ Y + V + L +L L+PLF ++ +GT + Q + LI KTGG+S F T+
Sbjct: 612 LTYFQAVNAFADLPDDLRLLLPLFNDAIMRLGTPTRTMEQWEDLIKLKTGGVSTSNFHTT 671
Query: 440 SIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQR---FKQFVSQSKARME 496
S + G A+ D+ + ++ E T ++ + +
Sbjct: 672 SPTEMGKYTEGLQFSGFALDKNVPDMLEILTALVTETDFTSPSAPAMIQELLRLTTNGAL 731
Query: 497 NRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIR 556
+ + G+GH A A L+ + W EQ G++ L+ L + ++ +E++R
Sbjct: 732 DAVAGTGHRYALNAAAAGLSRSFWAQEQTSGLAQLQATANLLRDAETSPERLAELIEKLR 791
Query: 557 --RSFL--SREGCLINMTADGKNLKNSERFVGKFLDMLP-TNSPVER-VKWKAHLPSANE 610
+SF G + + + + +E + +++ LP SP + ++ PS
Sbjct: 792 LIQSFAISKTSGLRVRLVCEPASSTQNESVLQRWVTGLPKVPSPTSQPQRFDLSTPSKKA 851
Query: 611 AIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGG 663
+P +V Y G A + + + V+S+ +++ +L +R GGAYG
Sbjct: 852 FYDLPYKVYYSGLALPTVPFTHSSSATLSVLSQLLTHNYLHPEIREKGGAYGA 904
>sp|Q4WP38|CYM1_ASPFU Mitochondrial presequence protease OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cym1
PE=3 SV=1
Length = 1065
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 131/208 (62%), Gaps = 20/208 (9%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ V+ +D+N VFGI F+T P D+TG+PHILEH+ LCGS KYP+++PF ++L SL+ F+N
Sbjct: 90 LHVAREDKNNVFGIGFKTNPPDATGVPHILEHTTLCGSEKYPIRDPFFKMLPRSLSNFMN 149
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP----- 115
AFT D T YP A+TN +DF NL+ VY DA P E + F+QEGW ++P
Sbjct: 150 AFTSADHTTYPFATTNRQDFQNLLSVYLDATLHPLLKE--EDFRQEGWRLGPEDPRSILT 207
Query: 116 ----------SEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVI 165
SED+ +KGVV+NEMKG S + + ++++ P +SGGDP+ I
Sbjct: 208 QGEQSKGNLQSEDVVFKGVVYNEMKGQISDANYLYYIKYRESICPSLN---NSGGDPQYI 264
Query: 166 PKLTFEEFKEFHRKYYHPSNARIWFYGD 193
LT ++ +F ++ YHPSNA+I YGD
Sbjct: 265 TDLTHQQLVDFSKRNYHPSNAKILTYGD 292
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 212/475 (44%), Gaps = 30/475 (6%)
Query: 208 MNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKA 267
++ +E +LR + T +F G+ +M +++ W NP + L + + + K + + G
Sbjct: 450 LHQLELALR-HKTANF--GIGVMEKTLSSWFNGSNPMKELSWNEVIDEFKKKYEQGG--- 503
Query: 268 VFSPLIEKYILNNPHCVTVEMQPDP---EKASRDEAAEKEI-LAKVKSSMTKEDLAELAR 323
L++KY++N+ +C+T M P + E KE L+++ + A A
Sbjct: 504 YLESLMQKYLMND-NCLTFTMVGTPSYNKDLDDQEMVRKEKKLSELVERHGSVEQAVSAL 562
Query: 324 ATEELRLKQETPDPPEA-LRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVL 382
A EEL+L + + A L +PSL + DI +E R P ++ + V+ + TN +
Sbjct: 563 AEEELQLLKIQEEAQNADLSCLPSLRVEDISREKERKPVRESKMDDIDVVWREAPTNGLT 622
Query: 383 YTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442
Y + + L +L L+PLF + +GT D + Q + LI KTGGI+ TS++H
Sbjct: 623 YFQALNSFEELPDDLRLLLPLFNDCIMRLGTGDKTMEQWEDLIKLKTGGIT----TSTLH 678
Query: 443 GKEDPCCCMVVRGKAMAGQA-----EDLFNLFNCVLQEVQLTDQQR---FKQFVSQSKAR 494
G +G A D+ + ++ E T ++ + +
Sbjct: 679 TSSPTELGKFREGLQFSGYALDNNIPDMLQILTTLVTETDFTSPHAPAMIQELLRMTTNG 738
Query: 495 MENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEE 554
+ + GSGH A A L+ + W+ EQ G++ L+ L + ++ +++
Sbjct: 739 ALDAVAGSGHRYALNAAAAGLSRSFWVQEQQSGLAQLQATANLLRDAESSPERLAELIDK 798
Query: 555 IR--RSF-LSR-EGCLINMTADGKNLKNSERFVGKFLDMLPTN-SPVERVKWKAHLPSAN 609
+R +SF +S+ G + M + + +E + K+L LP N SP + + AN
Sbjct: 799 LRLIQSFAISKGSGLRVRMVCEPSSASQNEIVLQKWLAGLPRNRSPTSPLDHTSVNSVAN 858
Query: 610 EAIV-IPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGG 663
+P +V Y G A + V+S+ +++ +L +R GGAYG
Sbjct: 859 RVFYDLPYKVYYSGLAMQTVPFIDPSSAPLSVLSQLLTHKYLHPEIREKGGAYGA 913
>sp|O51246|Y228_BORBU Uncharacterized protein BB_0228 OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=BB_0228
PE=4 SV=1
Length = 971
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 127/192 (66%), Gaps = 6/192 (3%)
Query: 12 FGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYP 71
F I F+T P ++TG+ H+LEH++ CGS KY +K+PF+ LLKGSLNTFLNA T+PD+T YP
Sbjct: 46 FCIAFKTIPSNNTGVAHVLEHTIFCGSSKYKIKDPFLYLLKGSLNTFLNAMTFPDKTIYP 105
Query: 72 VASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKG 131
AST KD++NL ++Y D++F P + ++F QEG++ NP +D G+VFNEMKG
Sbjct: 106 AASTIEKDYFNLFNIYADSIFNPLLKK--ESFMQEGYNI---NP-KDFKVSGIVFNEMKG 159
Query: 132 VYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFY 191
YS ++++ +LF + AY DSGG P I LT+E F +F++KYY N +I+
Sbjct: 160 SYSNKNSLINEIVSSSLFEEGAYKYDSGGIPTNIIDLTYESFLDFYKKYYTLENCKIFLC 219
Query: 192 GDDDPNERLRIL 203
G+ + L +
Sbjct: 220 GNTQTEKNLNFI 231
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 206/464 (44%), Gaps = 27/464 (5%)
Query: 212 EFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSP 271
EF+L+E +FP ++LM++S W+ ++P + L+ + + +L E F
Sbjct: 381 EFALKEEKGQNFP--IALMIKSFKGWLNGLHPIKTLQTSYYINEITNKL--EKGIYYFEN 436
Query: 272 LIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILA--KVKSSMTKEDLAELARATEELR 329
LIEKY++ N H + P + E ++ L +++ E+ + + + +
Sbjct: 437 LIEKYLIFNNHYTLISFIPSHDTEKEMEEEIEKKLMAREIEIKQNPEEFLQFKKDYNQFK 496
Query: 330 LKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFD 389
Q D + +P L + D+PK+ I ++ +I + + +N++ + F
Sbjct: 497 KYQNKKDSKADIAKLPLLKIEDLPKQ-IEKSLDLNEIKELNLHSFKFKSNNIFNVNLFFK 555
Query: 390 MSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVY-PFTSSIHGKEDPC 448
+ L++E + LF ++L+++ TK+ S++ ++ I G I++ + I G +
Sbjct: 556 LDFLEKEDYIYLSLFKRALQDLSTKNYSYININNKIQNTLGQINISESYDEDIDG--NIL 613
Query: 449 CCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAA 508
+ K+ + ++ F L +L + D +R K+ K ++ L GH +A
Sbjct: 614 NSFNISFKSFNNKVKESFELIKEILININFHDYERLKEITLSLKNDFKSLLIPKGHLLAM 673
Query: 509 ARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVD-QDWAGISSSLEEIRRSFLSREG--C 565
R +KL ++ E G++ EF Q + K D + I++ L+ ++ + +
Sbjct: 674 LRSKSKLKLNEYLKELQNGITGREFWQ--KAKTDTESLKEIANKLDNLKNKIILKNNLSA 731
Query: 566 LINMTADG--KNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGK 623
LI D KNL+N F + +N + A+ + E I+I ++V +
Sbjct: 732 LIMGNTDDILKNLEN--EFFNLKESLEESNHYNGLLNLDANSKALREIIIIQSKVAFNA- 788
Query: 624 AANIFETGYKLNGSAYVISKHISNVW----LWDRVRVSGGAYGG 663
I YK+N Y + + +V W+++RV GGAYG
Sbjct: 789 ---ICFPSYKINDENYPKANFLEHVLRSGIFWEKIRVMGGAYGA 829
>sp|P32898|CYM1_YEAST Mitochondrial presequence protease OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CYM1 PE=1 SV=2
Length = 989
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 129/208 (62%), Gaps = 8/208 (3%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ + DD+N VF I F+T P DSTG+PHILEH+ LCGS KYP+++PF ++L SL F+N
Sbjct: 57 LHIDRDDKNNVFSIAFKTNPPDSTGVPHILEHTTLCGSVKYPVRDPFFKMLNKSLANFMN 116
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGW---HFKLDNPSE 117
A T PD T +P ++TN +DF NL VY D+ P + + F QEGW H + +P
Sbjct: 117 AMTGPDYTFFPFSTTNPQDFANLRGVYLDSTLNPLLKQ--EDFDQEGWRLEHKNITDPES 174
Query: 118 DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
+I +KGVV+NEMKG S + QQ+++P +SGGDP I L + + +FH
Sbjct: 175 NIVFKGVVYNEMKGQISNANYYFWSKFQQSIYPSLN---NSGGDPMKITDLRYGDLLDFH 231
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSE 205
K YHPSNA+ + YG+ + L+ L+E
Sbjct: 232 HKNYHPSNAKTFTYGNLPLVDTLKQLNE 259
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 206/478 (43%), Gaps = 39/478 (8%)
Query: 196 PNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMA 255
P +R RI +A + +E S +++ F GL L+ + W ++PFE L +E L
Sbjct: 394 PFDRKRI--DAIIEQLELS-KKDQKADF--GLQLLYSILPGWTNKIDPFESLLFEDVLQR 448
Query: 256 LKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTK 315
+ L +G +F LI KYI++ P C T +Q E + + E+ L + +++ +
Sbjct: 449 FRGDLETKGD-TLFQDLIRKYIVHKP-CFTFSIQGSEEFSKSLDDEEQTRLREKITALDE 506
Query: 316 EDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTE--------VGDIN 367
+D + + L QE + E L +P+L ++DIP+ + E + D N
Sbjct: 507 QDKKNIFKRG---ILLQEKQNEKEDLSCLPTLQIKDIPRAGDKYSIEQKNNTMSRITDTN 563
Query: 368 GVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGR 427
G+ ++ ND++ EL P +PLF +SL +GT SF +++ I
Sbjct: 564 GITYVRGKRLLNDII-----------PFELFPYLPLFAESLTNLGTTTESFSEIEDQIKL 612
Query: 428 KTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQL-TDQQRFKQ 486
TGGIS + +S +P G ++ + + +F ++ +L E + + K
Sbjct: 613 HTGGISTHVEVTSDPNTTEPRLIFGFDGWSLNSKTDHIFEFWSKILLETDFHKNSDKLKV 672
Query: 487 FVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWA 546
+ + + + +GH A A ++G I+E + G+ L+F+ L +D +
Sbjct: 673 LIRLLASSNTSSVADAGHAFARGYSAAHYRSSGAINETLNGIEQLQFINRLHSLLDNEET 732
Query: 547 ---GISSSLEEIRRSFLSREGCLINMTADGK-NLKNSERFVGKFLDMLPTNSPVERVKWK 602
+ L E+++ + +T+D K E + KF++ LP S +
Sbjct: 733 FQREVVDKLTELQKYIVDTNNMNFFITSDSDVQAKTVESQISKFMERLPHGSCLPNGPKT 792
Query: 603 AHLP-----SANEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVR 655
+ P + I P QV+Y +A +K + V+S ++ L VR
Sbjct: 793 SDYPLIGSKCKHTLIKFPFQVHYTSQALLGVPYTHKDGSALQVMSNMLTFKHLHREVR 850
>sp|Q5A301|CYM1_CANAL Mitochondrial presequence protease OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=CYM1 PE=3 SV=1
Length = 1034
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 8/192 (4%)
Query: 4 SNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFT 63
S +D N VF I F+T P D+TG+PHILEH+ LCGS+K+P+++PF ++ SL+ F+NA T
Sbjct: 73 SPNDSNNVFSIAFKTNPPDNTGVPHILEHTTLCGSKKFPVRDPFFKMTNRSLSNFMNAMT 132
Query: 64 YPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP---SEDIT 120
D T YP A+TN+KDF NL+DVY +VF P+ + F QEGW + N S +
Sbjct: 133 GHDYTFYPFATTNSKDFENLMDVYLSSVFEPQL--NHTDFLQEGWRIENQNVHDISSKLE 190
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
+KGVV+NEMKG YS ++++P +SGGDPK I L++E EFH K
Sbjct: 191 FKGVVYNEMKGQYSNSAYYFYIKFLESIYPSLN---NSGGDPKKIVDLSYEGLLEFHSKN 247
Query: 181 YHPSNARIWFYG 192
YHPSNA+ + YG
Sbjct: 248 YHPSNAKTFTYG 259
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/556 (23%), Positives = 243/556 (43%), Gaps = 67/556 (12%)
Query: 163 KVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGS 222
K+IP+L+ EE +H RI +A ++ IE + +
Sbjct: 411 KIIPELSNEESSSYH--------GRI----------------DAILHQIEIGFKRHKPD- 445
Query: 223 FPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPH 282
G L+ + W+ ++P + L+ EK L K + G + +F L+EK L NPH
Sbjct: 446 --FGFGLLSSIVPSWVNGVDPIDTLQVEKILSHFKEDYKQNGLR-IFKELLEK-TLCNPH 501
Query: 283 CVTVEMQPDPEKASRDEAAEKE--ILAKVKSSMTKEDLAELARATEELRLKQETPDPPEA 340
+ +P + + + E ++ K S +T+++ + EL Q E
Sbjct: 502 SQKFKFTMEPREDFTKQLVKDENLMIEKRVSELTEDNKKAIYEQNLELAKLQLEDQNTEV 561
Query: 341 LRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPL 400
L P+L++ DIPK ++G +N V + + TN ++Y + D+S L +L
Sbjct: 562 L---PTLTIDDIPKRGDFYAIDLGQVNKKVVHERVVDTNGLVYANALKDISYLPTKLYKY 618
Query: 401 IPLFCQSLKEM-GTKDLSFVQLDQLIGRKTGGISVYPFTSSI----HGKEDPCCCMVVRG 455
+PLF L + GT++ +L+ I TGGI+ F+S I + E V+ G
Sbjct: 619 LPLFNNCLTNLAGTENTPITELETKIQMLTGGIT---FSSKISTDPYNIEQLKLQYVLSG 675
Query: 456 KAMAGQAEDLFNLFNCVLQEVQL--TDQ--QRFKQFVSQSKARMENRLRGSGHGIAAARM 511
A+ ++ +++L+ +L + +D+ ++ + N + GH AAA
Sbjct: 676 MALKEKSSSVYDLWLEILTTTKFDTSDEVLEKLSVLIKNMGQNQINNIADRGHSYAAAVS 735
Query: 512 DAKLNTAGWISEQMGGVSYLEFLQALEEKVDQD-----WAGISSSLEEIRRSFLSREGCL 566
+KL + +IS+ + G+S ++F+ L K++ + I L+EI++ L E
Sbjct: 736 SSKLTPSKYISDIVSGLSQVQFVMELNSKLESEGKEYLAKEIIPILQEIQKYVLQGE-FR 794
Query: 567 INMTADGKNLKNSERFVGKFLDMLPTNSPVERV-----------KWKAHLPSANEAIVIP 615
+ + + + +E+ + KF + +N P + + + S N + +P
Sbjct: 795 YRLVGNQEIIVENEKLIEKFDKDISSNRPTLSLTVTDGLSALLNSFNYNHTSENVLVNLP 854
Query: 616 TQVNY--VGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGV 673
QV Y +GK + + + K S ++S+ S L ++R S GAYGG +D +G
Sbjct: 855 FQVGYSSLGKIGSSYSS--KDGASLQILSQLYSFKNLHSKIRESNGAYGGGLTYDGLNGT 912
Query: 674 ILIFILSGPQLVKNTR 689
+ + P VK+ +
Sbjct: 913 LNFYSYRDPNPVKSIQ 928
>sp|Q6BTC0|CYM1_DEBHA Mitochondrial presequence protease OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CYM1 PE=3 SV=2
Length = 1063
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 6 DDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYP 65
+D+N VF + F+T D+TG+PHILEH+ LCGS KYP+++PF ++L SL+ F+NA T
Sbjct: 83 NDKNNVFSVAFKTNAPDATGVPHILEHTTLCGSFKYPVRDPFFKMLNRSLSNFMNAMTGH 142
Query: 66 DRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFK---LDNPSEDITYK 122
D T YP A+TN KDF NL+DVY +VF P ++F QEGW + L +P I +K
Sbjct: 143 DYTYYPFATTNAKDFENLMDVYLSSVFEPLLTH--ESFMQEGWRLENSDLSDPKSPIIFK 200
Query: 123 GVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGV--DSGGDPKVIPKLTFEEFKEFHRKY 180
GVV+NEMKG YS Q+A+ YG +SGG+P I L +E+ +FH
Sbjct: 201 GVVYNEMKGQYSNSAYYYWIKFQEAI-----YGSLNNSGGNPNEITDLRYEDLVDFHSSN 255
Query: 181 YHPSNARIWFYGDDDPNERLRILSE 205
YHPSNA+ + YG+ + L L+E
Sbjct: 256 YHPSNAKTFTYGNIELVNHLNKLNE 280
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 224/518 (43%), Gaps = 52/518 (10%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EA ++ IE + + N+ F G+ L+ + W+ +NP + L+ + L K G
Sbjct: 437 EAILHQIELNFK-NHKPEF--GIGLLSSVVSTWVNGLNPVKSLQIDHILNRFKEDYKLNG 493
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
K L E + ++ M+PD + E E L K ++T+ED + +
Sbjct: 494 LKMFQDLLDESVLKDDTPKFKFTMEPDESFGKNLTSQETERLNKKIEALTEEDKEIIYKR 553
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
+ EL KQ+ + AL P+L+++DIP+E P + DIN K+ + + TN ++Y
Sbjct: 554 SIELAEKQKKEEDVSAL---PTLTVKDIPREGDFYPLDFADINSKKLQKRIVDTNGLIYM 610
Query: 385 EVVFDMSSLKQELLPLIPLF-CQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHG 443
D+S L + +PLF C GT +L+ I + TGG+ T ++
Sbjct: 611 NATKDISYLPSKYYEYLPLFDCCLTNLAGTSKTPITELEIKIQKLTGGV-----TFNVSA 665
Query: 444 KEDPC------CCMVVRGKAMAGQAEDLFNLFNCVLQEVQLT--DQQRFKQFVSQSKARM 495
K DP ++ G A+ +++++++L+ +L + + D+Q + + K
Sbjct: 666 KTDPFDISKTNMKFMLSGMALKDKSQNVYDLWFEILTQTKFDSEDEQVVDKLFTLVKNLG 725
Query: 496 ENRLR---GSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSS- 551
+N++ SGH A + +++L +I +GG+ + F+ L K++ +
Sbjct: 726 QNQMNTIADSGHSYANSYSNSQLTPTKYIHNLIGGIGQVSFISDLNRKLETEGRDFLKKE 785
Query: 552 ----LEEIRRSFL------SREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW 601
L++I+R + + G ++ D +++ +E+ + +F D+L NS RV
Sbjct: 786 LLPVLKDIQRHLVNGFTDGNHSGFEYSLVGDSESVIKNEKMIKEFDDLLTANS--NRVAG 843
Query: 602 KAHLPSA----------------NEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHI 645
L S + I +P QV Y A K + V+S+ +
Sbjct: 844 TNELSSLISQFNSNKLGLNNNGRSTLIDLPFQVGYASLAKLGAAYTSKDGAALRVLSQLL 903
Query: 646 SNVWLWDRVRVSGGAYGGFCDFDSHSGVILIFILSGPQ 683
+ L +R + GAYGG FD G + + P
Sbjct: 904 TFKHLHSVIREANGAYGGGLSFDGLGGCLNFYSYRDPN 941
>sp|Q6C0U8|CYM1_YARLI Mitochondrial presequence protease OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=CYM1 PE=3 SV=1
Length = 990
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 129/231 (55%), Gaps = 9/231 (3%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
+ ++ DD N VF I F+T P D TG+PHILEH+ LCGS KY +++PF ++L SL F+N
Sbjct: 62 LHIARDDSNNVFSIGFKTNPPDRTGVPHILEHTTLCGSEKYQVRDPFFKMLNRSLANFMN 121
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSED-- 118
A T D T YP A+TN D NL DVY DA P E F QEGW + ++ +
Sbjct: 122 AMTAQDYTFYPFATTNATDMKNLRDVYLDATLKPLLRE--LDFSQEGWRLENEDSKDKTS 179
Query: 119 -ITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFH 177
I KGVVFNEMKG S + ++P +SGGDP VIP+LT+E K+FH
Sbjct: 180 PIILKGVVFNEMKGQMSNAAYAFYIRYLEKIYPSLN---NSGGDPLVIPELTYEGLKKFH 236
Query: 178 RKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLS 228
+Y+PSNA+ + YGD + L L+ A E S NT P S
Sbjct: 237 ADHYNPSNAKTFSYGDISVADHLEALN-AKFENCEISKTPGNTERLPLEFS 286
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 14/413 (3%)
Query: 216 RENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEK 275
R++ F G++LM + W ++P E L++ L + E +++K
Sbjct: 420 RKDQNAKF--GMALMNGVLPGWFNQVDPLEALEWNSVLDRFNKDM--EADPEFLQKVMKK 475
Query: 276 YILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETP 335
Y+L+N + +M P+P+ + E EIL + +T+ D E+ L QE P
Sbjct: 476 YLLDNKY-FHFQMNPNPDYEKNVQEKEDEILTDKLAKLTESDKEEIFETGANLEKMQEEP 534
Query: 336 DPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ 395
E L +P+L + DIP+ RV E N + TN + Y + + L
Sbjct: 535 ---ENLDCLPTLHVSDIPRSKPRVALEHTK-NPYPIQWRLAPTNGLTYFHSISSLEGLPH 590
Query: 396 ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPC-CCMVVR 454
E P +PLF SL +GTKD + QL+ I TGG+ SS +
Sbjct: 591 EYYPFLPLFTSSLTFLGTKDKTMGQLEDEIKLNTGGLDFSVSCSSSPLSLPSSQLNFAMD 650
Query: 455 GKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAK 514
G A+ E +F LF +L+ T+ ++ K ++ S A + N L SGH A R +
Sbjct: 651 GVALDKNVETMFGLFQELLRNTDFTNVEKLKTMIAASTANLSNALAQSGHSFAMLRAASD 710
Query: 515 LNTAGWISEQMGGVSYLEFLQALEEKVDQDWAG-ISSSLEEIRRSFLSREGCLINMTADG 573
++ I + +GGV+ + FL L K +Q + L+EI + L+RE
Sbjct: 711 ISPVKKIDDILGGVAQVRFLSELAAKSEQQLVDEVIPKLQEIAKFALTREQRFAVTCGQD 770
Query: 574 KNLKNSERFVGKFLDMLPTN-SPVERVKWKAHLPSANEAIV-IPTQVNYVGKA 624
KN E V KF + TN SP + + + +P QVNY G A
Sbjct: 771 MQTKNDE-LVRKFAESFETNESPFNISSLSIPMTTPTSTLFKLPFQVNYAGIA 822
>sp|P48053|YPD1_CAEEL Uncharacterized protein C05D11.1 OS=Caenorhabditis elegans
GN=C05D11.1 PE=1 SV=2
Length = 995
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 13 GIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPV 72
+ F T G+PH LEH V GS+KYP K + L NA+T D T Y +
Sbjct: 45 AVSFVTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADGTNAWTDTDHTAYTL 104
Query: 73 ASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
++ + F ++ VY + + P F E H + GVV++EM+
Sbjct: 105 STVGSDGFLKVLPVYINHLLTPMLTA--SQFATEVHHITGEGND-----AGVVYSEMQDH 157
Query: 133 YSQPDNILGRAAQQALFPD-NAYGVDSGGDPKVIPK-LTFEEFKEFHRKYYHPSNARIWF 190
S+ ++I+ R ++ ++P N Y VD+GG K + + T E+ +++H+K+YH SN +
Sbjct: 158 ESEMESIMDRKTKEVIYPPFNPYAVDTGGRLKNLRESCTLEKVRDYHKKFYHLSNMVVTV 217
Query: 191 YGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSM 234
G D ++ L I MN +E FP+ S L +
Sbjct: 218 CGMVDHDQVLEI-----MNNVENEHMSTVPDHFPKPFSFALSDI 256
>sp|Q12496|YO098_YEAST Uncharacterized protein YOL098C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YOL098C PE=1 SV=1
Length = 1037
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 22 DSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFL---NAFTYPDRTCYPVASTNTK 78
+ +G PH LEH + GS+ YP K LL + N L NA+T D+T Y ++S K
Sbjct: 54 NDSGAPHTLEHLIFMGSKSYPYKG----LLDTAGNLSLSNTNAWTDTDQTVYTLSSAGWK 109
Query: 79 DFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDN 138
F L+ Y D + P + + E +H +N + KGVVF+EM+ + +Q
Sbjct: 110 GFSKLLPAYLDHILHPTLTD--EACLTEVYHIDPENLGD----KGVVFSEMEAIETQGWY 163
Query: 139 ILGRAAQQALFPD-NAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPN 197
I G Q+ +FP+ + Y ++GG K + LT +E ++FH+ Y N + G+ +
Sbjct: 164 ISGLEKQRLMFPEGSGYRSETGGLTKNLRTLTNDEIRQFHKSLYSSDNLCVIVCGNVPTD 223
Query: 198 ERLRILSE 205
E L ++ E
Sbjct: 224 ELLTVMEE 231
>sp|Q10068|YAN2_SCHPO Uncharacterized protein C3H1.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC3H1.02c PE=4 SV=1
Length = 1036
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 13 GIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPV 72
V T D+ G PH LEH GS+KYP+ + G +NA T D T Y +
Sbjct: 46 SFVVATEAHDNLGCPHTLEHLCFMGSKKYPMNGILTKF-AGRACGDINACTDVDYTSYEL 104
Query: 73 ASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
++ F L+ V+ D + P + + F E +H ++ E+ GVV++EM+
Sbjct: 105 SAAEEDGFLRLLPVFADHILSPILSD--EAFCTEVYH--INGMGEE---SGVVYSEMQNT 157
Query: 133 YSQPDNILGRAAQQALFP-DNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFY 191
S +++ + + +P + Y ++GG P + KL+ E+ +E+H++ Y PSN +
Sbjct: 158 QSSETDVMFDCMRTSQYPVTSGYYYETGGHPSELRKLSIEKIREYHKEMYVPSNICLIVT 217
Query: 192 GDDDPNERLRILSEAS 207
G + + R+LS AS
Sbjct: 218 GCINES---RLLSCAS 230
>sp|P55679|Y4WA_RHISN Uncharacterized zinc protease y4wA OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01040 PE=3 SV=1
Length = 512
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P +GI H LEH + G++K+P E ++ + + NAFT D T Y T
Sbjct: 123 PPGKSGIAHFLEHLMFKGTKKHPSGEFSAKIAE--IGGEENAFTGSDYTAYHQTVT---- 176
Query: 80 FYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMK-GVYSQPDN 138
P+ + F+ + + + + + V+ E + V + P+
Sbjct: 177 --------------PESLRTMMEFEADRMRHLVLTDAVIVPERDVILEERRWRVENDPEQ 222
Query: 139 ILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNE 198
+L Q L+ ++ Y + + G + +L E+ +F+ +YY P+NA + GD D
Sbjct: 223 LLEEEMQATLYQNHPYRIPTIGWMHEMEQLNREDALKFYDRYYAPNNAILVVAGDVDAG- 281
Query: 199 RLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMAL 256
R+R L++ + G+ PRG L R + P EP + K ++AL
Sbjct: 282 RVRQLADETF------------GTLPRGPDLPAR--------VRPQEPEQNTKRIVAL 319
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 9 NKVFGIVFRTPPKDST----GIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTY 64
+ FGI +D T G H LEH + G+RK + + ++ +NAFT
Sbjct: 56 SATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSALD--ISSAIDAVGGEMNAFTA 113
Query: 65 PDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITY-KG 123
+ TCY +T D +DV D + + QE ED+ +G
Sbjct: 114 KEYTCYYARVLDT-DLPLAIDVVCDMLT--------GSLIQE----------EDVDVERG 154
Query: 124 VVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHP 183
+ E+ P + + +F DNA G G + LT + + F+RK+Y P
Sbjct: 155 AILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDP 214
Query: 184 SNARIWFYGDDDPNERLRILSEA 206
++ + G+ D N+ +R + A
Sbjct: 215 THLVVAAAGNVDHNKVVRQVRAA 237
>sp|P45181|PQQL_HAEIN Probable zinc protease PqqL OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=pqqL PE=3 SV=1
Length = 926
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 29/192 (15%)
Query: 22 DSTGIPHILEHSVLCGSRKYPLKEPF--VELLKGSLNTFLNAFTYPDRTCYPVA--STNT 77
D GI H++EH GS+KYP + +E L +NAFT + T Y + S N
Sbjct: 73 DQKGIAHLVEHMAFNGSKKYPENQIINALEKLGMKFARDINAFTDFENTVYTLNLDSNNQ 132
Query: 78 KDF---YNLVDVYFDAV-FFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVY 133
+ +++++ + + + F PK V+ + QE W +L +P I K Y
Sbjct: 133 QKLELAFDVINEWMNNITFLPKDVDGERGVVQEEWRRRL-SPMLRIGNKKSAIEMAGSRY 191
Query: 134 SQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGD 193
D I GD +I ++ + +F+ K+Y P N + GD
Sbjct: 192 VLRDPI--------------------GDMDIIKTISAKRVADFYHKWYRPDNMSVIIVGD 231
Query: 194 DDPNERLRILSE 205
D + +++L +
Sbjct: 232 IDTKQVVKLLKQ 243
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 73/194 (37%), Gaps = 20/194 (10%)
Query: 12 FGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYP 71
G+ R G H LEH +L S + + ++ LNAFT + TCY
Sbjct: 50 VGVGSRDEGATVAGAAHFLEH-LLFKSTSTRTAMDIAQAID-AVGGELNAFTAKEHTCY- 106
Query: 72 VASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKG 131
A D VD+ D V +C D +++ VV E+
Sbjct: 107 YAHVLDSDLELAVDLVADVVLNGRCAVDDVELERD-----------------VVLEEIAM 149
Query: 132 VYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFY 191
P++ LG ALF D+ G G + + +T + FH + Y P +
Sbjct: 150 RDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERMVVAVA 209
Query: 192 GDDDPNERLRILSE 205
G+ D +E + ++ E
Sbjct: 210 GNVDHDEMVALVRE 223
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 33/211 (15%)
Query: 17 RTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY--PVAS 74
R ++ GI H LEH G++ ++ E S+ + NA+T + T Y V S
Sbjct: 38 RYENEEEEGISHFLEHMAFKGTKTRTAQQIAEEF--DSIGGYFNAYTGYENTVYYVRVLS 95
Query: 75 TNTKDFYN-LVDVYFDAVFFPKCV-EDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
N N L D+ +++F + + +++Q QE H DNP
Sbjct: 96 ENCHKALNILADIIQNSIFADEEISKEYQIIMQEIAHHH-DNP----------------- 137
Query: 133 YSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYG 192
D+++ ++ D G G K + K T E F F K+Y+ N + G
Sbjct: 138 ----DDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAENLYLSIAG 193
Query: 193 DDDPNERLRILSEASMNTIEFSLRENNTGSF 223
+ + N+ + I E SL++ T SF
Sbjct: 194 NIEHNKIVIIAEELFA-----SLKQGVTSSF 219
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 22/195 (11%)
Query: 12 FGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPF-VELLKGSLNTFLNAFTYPDRTCY 70
G+ R G H LEH + + P + + ++ LNAFT + TCY
Sbjct: 43 VGVGSRDEGATVAGAAHFLEHLLF---KSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCY 99
Query: 71 PVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMK 130
A D VD+ D V +C D +++ VV E+
Sbjct: 100 -YAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERD-----------------VVLEEIA 141
Query: 131 GVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWF 190
P++ L ALF D+ G G + + +T + + FH + Y P +
Sbjct: 142 MRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAA 201
Query: 191 YGDDDPNERLRILSE 205
G+ D + + ++ E
Sbjct: 202 AGNVDHDGLVALVRE 216
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 22/195 (11%)
Query: 12 FGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPF-VELLKGSLNTFLNAFTYPDRTCY 70
G+ R G H LEH + + P + + ++ LNAFT + TCY
Sbjct: 43 VGVGSRDEGATVAGAAHFLEHLLF---KSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCY 99
Query: 71 PVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMK 130
A D VD+ D V +C D +++ VV E+
Sbjct: 100 -YAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERD-----------------VVLEEIA 141
Query: 131 GVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWF 190
P++ L ALF D+ G G + + +T + + FH + Y P +
Sbjct: 142 MRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAA 201
Query: 191 YGDDDPNERLRILSE 205
G+ D + + ++ E
Sbjct: 202 AGNVDHDGLVALVRE 216
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 17 RTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY--PVAS 74
R ++ GI H LEH G++ ++ E S+ + NA+T + T Y V S
Sbjct: 38 RYENEEEEGISHFLEHMAFKGTKTRTAQQIAEEF--DSIGGYFNAYTGHENTVYYARVLS 95
Query: 75 TNTKDFYN-LVDVYFDAVFF-PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
N N L D+ +++F + +++Q QE H DNP +D+ Y+ KG
Sbjct: 96 ENCHKALNILADIIQNSIFADEEIAKEYQIIMQEIAHHH-DNP-DDLIYETFYNTVYKG- 152
Query: 133 YSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYG 192
QP LG++ G K + T E F F K+Y+ N + G
Sbjct: 153 --QP---LGKSIL--------------GTTKTLVTFTKEHFLNFIGKHYNAENLYLSIAG 193
Query: 193 DDDPNERLRILSE 205
+ + N+ + I E
Sbjct: 194 NIEHNKIVMIAEE 206
>sp|O31766|YMFH_BACSU Uncharacterized zinc protease YmfH OS=Bacillus subtilis (strain
168) GN=ymfH PE=3 SV=2
Length = 428
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 29/174 (16%)
Query: 25 GIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNT--KDFYN 82
GI H LEH + + + F + K + NAFT RT Y +ST+ ++
Sbjct: 65 GIAHFLEHKLFEKADG----DVFQDFSKQGASA--NAFTSFTRTAYLFSSTSNVERNLET 118
Query: 83 LVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGR 142
L+D D F K VE KG++ E+ PD L
Sbjct: 119 LIDFVQDPYFTEKTVE---------------------KEKGIIGQEINMYDDNPDWRLYF 157
Query: 143 AAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDP 196
+ ++ ++ +D G + I +T + E + +YHPSN ++ G DP
Sbjct: 158 GVIENMYKEHPVRIDIAGTVESISHITKDLLYECYETFYHPSNMLLFIVGPVDP 211
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 20/171 (11%)
Query: 25 GIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLV 84
GI H LEH + + E F EL N NA T TCY S N+ L+
Sbjct: 46 GISHFLEHMMFKRTTNKSSDELFSELDSTGAN--YNAITTTQNTCY-FLSGNSNYIDKLL 102
Query: 85 DVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAA 144
D+ D P V D ++E + V+ EMK QP + +
Sbjct: 103 DIMLDIFLHPNFVSD--DIERE---------------RKVIMEEMKIRADQPQSSMTYQI 145
Query: 145 QQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDD 195
+ F + + G + I + + ++F+ +Y P+N G+ D
Sbjct: 146 HEVYFKNTSLSQKVIGSIESIKNIDKNDLEKFYSTFYRPNNTIFIMAGNFD 196
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 26/185 (14%)
Query: 12 FGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYP 71
G R + GI H LEH G+ +E + + +NAFT + TCY
Sbjct: 30 IGTGSRHETPEINGISHFLEHMFFKGTSTKSAREIAESFDR--IGGQVNAFTSKEYTCYY 87
Query: 72 VASTNTKDFYNL---VDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNE 128
+ Y L D++F + F D ++E K VV+ E
Sbjct: 88 AKVLDEHANYALDVLADMFFHSTF------DENELKKE---------------KNVVYEE 126
Query: 129 MKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARI 188
+K PD+I+ +A + +++ G G + + + +++ YY P I
Sbjct: 127 IKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTPDRVVI 186
Query: 189 WFYGD 193
G+
Sbjct: 187 SVAGN 191
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 31/194 (15%)
Query: 17 RTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY--PVAS 74
R + GI H LEH G++ K+ + ++ NA+T + T Y V S
Sbjct: 38 RYENAEEDGISHFLEHMAFKGTKTRTAKQ--IAEAFDAIGGHFNAYTGHENTVYYARVLS 95
Query: 75 TNTKDFYN-LVDVYFDAVFF-PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
N N L D+ +++F + +++Q QE H + DNP +D+ Y+ +N+ V
Sbjct: 96 ENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQ-DNP-DDLVYEKF-YNK---V 149
Query: 133 Y-SQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFY 191
Y QP LG++ G K + T E F F KYY+ +N +
Sbjct: 150 YREQP---LGKSIL--------------GTAKTLATFTKEHFFNFIDKYYNAANLYLSIA 192
Query: 192 GDDDPNERLRILSE 205
G+ D ++++ I++E
Sbjct: 193 GNID-HDKIVIIAE 205
>sp|Q8Z418|PTRA_SALTI Protease 3 OS=Salmonella typhi GN=ptrA PE=3 SV=1
Length = 962
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 11 VFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY 70
V +V P+ G+ H LEH L GS+KYP + E LK + NA T P RT +
Sbjct: 71 VVPVVSLEDPEAHQGLAHYLEHMCLMGSKKYPQADSLAEYLKRHGGSH-NASTAPYRTAF 129
Query: 71 PVASTNTKDFYNLVDVYFDAVFFP 94
+ N VD DA+ P
Sbjct: 130 YLEVENDA-LPGAVDRLADAIAAP 152
>sp|Q8ZMB5|PTRA_SALTY Protease 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=ptrA PE=3 SV=1
Length = 962
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P+ G+ H LEH L GS+KYP + E LK + NA T P RT + + N
Sbjct: 80 PEAHQGLAHYLEHMCLMGSKKYPQADSLAEYLKRHGGSH-NASTAPYRTAFYLEVENDA- 137
Query: 80 FYNLVDVYFDAVFFP 94
VD DA+ P
Sbjct: 138 LPGAVDRLADAIAAP 152
>sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12)
GN=pqqL PE=3 SV=2
Length = 931
Score = 40.4 bits (93), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 25 GIPHILEHSVLCGSRKYP---LKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFY 81
G+ H +EH + G++ +P + E F E + +NA+T D T Y V+ T+
Sbjct: 77 GVAHFVEHMMFNGTKTWPGNKVIETF-ESMGLRFGRDVNAYTSYDETVYQVSLPTTQK-Q 134
Query: 82 NLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILG 141
NL V A+F + TF+ KL+ +E +GV+ E + Q
Sbjct: 135 NLQQVM--AIFSEWS--NAATFE------KLEVDAE----RGVITEEWRA--HQDAKWRT 178
Query: 142 RAAQQALFPDNAYGVDSG--GDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNER 199
A++ N +D G + +T + ++F++++Y P+N GD D E
Sbjct: 179 SQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEA 238
Query: 200 LRILSE 205
L ++ +
Sbjct: 239 LALIKD 244
>sp|Q8X6M8|PTRA_ECO57 Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=3 SV=1
Length = 962
Score = 40.0 bits (92), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P+ G+ H LEH L GS+KYP + E LK + NA T P RT + + N
Sbjct: 80 PEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSH-NASTAPYRTAFYLEVENDA- 137
Query: 80 FYNLVDVYFDAVFFP 94
VD DA+ P
Sbjct: 138 LPGAVDRLADAIAEP 152
>sp|P05458|PTRA_ECOLI Protease 3 OS=Escherichia coli (strain K12) GN=ptrA PE=1 SV=1
Length = 962
Score = 39.7 bits (91), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P+ G+ H LEH L GS+KYP + E LK + NA T P RT + + N
Sbjct: 80 PEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSH-NASTAPYRTAFYLEVENDA- 137
Query: 80 FYNLVDVYFDAVFFP 94
VD DA+ P
Sbjct: 138 LPGAVDRLADAIAEP 152
>sp|Q83QC3|PTRA_SHIFL Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1
Length = 962
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P+ G+ H LEH L GS+KYP + E LK + NA T P RT + + N
Sbjct: 80 PEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSH-NASTAPYRTAFYLEVENDA- 137
Query: 80 FYNLVDVYFDAVFFP 94
VD DA+ P
Sbjct: 138 LPGAVDRLADAIAEP 152
>sp|Q8CVS2|PTRA_ECOL6 Protease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ptrA PE=3 SV=1
Length = 962
Score = 39.7 bits (91), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 20 PKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKD 79
P+ G+ H LEH L GS+KYP + E LK + NA T P RT + + N
Sbjct: 80 PEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSH-NASTAPYRTAFYLEVENDA- 137
Query: 80 FYNLVDVYFDAVFFP 94
VD DA+ P
Sbjct: 138 LPGAVDRLADAIAEP 152
>sp|P40851|AXL1_YEAST Putative protease AXL1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AXL1 PE=1 SV=2
Length = 1208
Score = 39.7 bits (91), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 20 PKDSTGIPHILEHSVL-CGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTK 78
PKD G+ H+ EH +L GS+KYP F L+ + N NAFT ++T + NT+
Sbjct: 60 PKDIAGLAHLCEHMILSAGSKKYPDPGLFHTLIAKN-NGSQNAFTTGEQTTFYFELPNTQ 118
Query: 79 D-----FYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVY 133
+ F +++DV+ A FF + + + +E + + ++ +I+ +F +
Sbjct: 119 NNGEFTFESILDVF--ASFFKEPLFNPLLISKEIYAIQSEHEG-NISSTTKIFYHAARIL 175
Query: 134 SQPDNILGR 142
+ PD+ R
Sbjct: 176 ANPDHPFSR 184
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 39.7 bits (91), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 31/194 (15%)
Query: 17 RTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY--PVAS 74
R + GI H LEH G+ K+ E + NA+T ++T Y V S
Sbjct: 38 RYENSEEEGISHFLEHMAFKGTTTRTAKQIAEEF--DEIGGHFNAYTGHEKTIYYARVLS 95
Query: 75 TNTKDFYN-LVDVYFDAVFFPKCV-EDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGV 132
N N L D+ +++F + + +++Q QE H S+D
Sbjct: 96 ENCDKALNILADIIQNSIFAEEEIAKEYQVILQEIAH------SQD-------------- 135
Query: 133 YSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYG 192
PD+++ +++ D G G K + T E F F K+Y+ N + G
Sbjct: 136 --NPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAGNLYLSVAG 193
Query: 193 DDDPNERLRILSEA 206
+ D + +I+S A
Sbjct: 194 NVDHD---KIVSSA 204
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 25 GIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCY--PVASTN-TKDFY 81
GI H LEH G++ K+ E S+ NA+T ++T Y V S N K
Sbjct: 46 GIAHFLEHMAFKGTKTRTAKQIAEEF--DSIGGHFNAYTGHEKTVYYSRVLSENCNKALA 103
Query: 82 NLVDVYFDAVFFPKCV-EDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNIL 140
+ D+ ++ F + + +++Q QE H + DNP +D+ Y+
Sbjct: 104 IIADIVQNSAFAEEEIAKEYQVILQEIAHAQ-DNP-DDLVYEKFY--------------- 146
Query: 141 GRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERL 200
++F D G G K I + F +F K+Y+ N + G+ D E +
Sbjct: 147 -----NSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAENFYLSIAGNVDHEEIV 201
Query: 201 R 201
+
Sbjct: 202 K 202
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mug138 PE=1 SV=1
Length = 969
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 17 RTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTN 76
++ P++ G+ H EH + G++KYP + + + L+ S N NA+T + T Y ++
Sbjct: 57 QSNPRELLGLAHFCEHLLFMGTKKYPDENEYRKYLE-SHNGISNAYTASNNTNYYFEVSH 115
Query: 77 TKDFYNLVD----VYFDAVFFPKC---------VEDFQTFQQEGWHFKLDNPSEDITYKG 123
Y +D + D +F +C E + Q + W F
Sbjct: 116 DA-LYGALDRFAQFFIDPLFLEECKDREIRAVDSEHCKNLQSDSWRFW------------ 162
Query: 124 VVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGD-PKVIPKLTFEEFKEFHRKYYH 182
+ V S P ++ + N +++ GD PK + +E +F+ KYY
Sbjct: 163 ----RLYSVLSNPKSVFSKF--------NTGNIETLGDVPKELGLDVRQELLKFYDKYYS 210
Query: 183 PSNARIWFYG 192
+ ++ G
Sbjct: 211 ANIMKLVIIG 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,308,337
Number of Sequences: 539616
Number of extensions: 11635159
Number of successful extensions: 30077
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 29841
Number of HSP's gapped (non-prelim): 151
length of query: 691
length of database: 191,569,459
effective HSP length: 124
effective length of query: 567
effective length of database: 124,657,075
effective search space: 70680561525
effective search space used: 70680561525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)