Your job contains 1 sequence.
>005563
MNGGLKSGSRDIPENANAGSNCDMQPSSCLNKPQQSSTLKDDSSTPHFGLAVSYASPSET
NSQIGVSGSHLRPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPRVDARGRSQLLPRYWP
RFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLK
VQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFR
KASSASASDQDNEANKAGTGIPANGHAELADPSSWSKVDKSGYIATEALGAKSSISRKRK
NTTLGSKSKRLKIENEDVIELKLTWEEAQGLLRPPPNNVPSVVVIEGYEFEEYEDAPILG
KPTIFATDNVGEKIQWVQCEDCSKWRKVPANARLPSKWTCSGNLWDPERSVCSVAQELRE
EQLEDLIAPNNPASSKKLKAAKQEPDCVEALEGLDTLANLAILGEGEGLTASSQATTKHP
RHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFHTLMLRREKKQSEKDAETSRKK
QQQQKLPVPEKSADDDPLSCSKTGNNSPNEKKVVSEGSDDDSSRIKSSTSPFKGQIDLNI
QPEREEELSPGSDSGSMIRLLQDATEKYLRQQRLSSSGVNTSSVDNEGLQGGVTGEKISN
GITLDGSHQDTDEDHHGSLSVKASASISATG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005563
(691 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 1260 2.9e-133 2
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 1210 2.4e-125 2
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 222 3.0e-16 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 204 2.2e-15 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 220 2.6e-15 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 222 3.3e-15 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 214 2.0e-14 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 212 1.3e-13 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 204 1.9e-13 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 210 6.9e-13 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 191 1.2e-12 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 191 4.6e-12 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 183 2.4e-11 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 179 2.5e-11 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 183 4.0e-11 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 180 9.3e-11 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 176 2.1e-10 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 173 2.9e-10 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 176 3.7e-10 2
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 170 1.2e-09 1
ZFIN|ZDB-GENE-040801-98 - symbol:morc3b "MORC family CW-t... 144 3.3e-06 1
UNIPROTKB|F1SGX2 - symbol:MORC3 "Uncharacterized protein"... 139 1.5e-05 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 140 1.6e-05 2
RGD|1307924 - symbol:Morc3 "MORC family CW-type zinc fing... 134 3.5e-05 1
UNIPROTKB|F1PFJ7 - symbol:MORC3 "Uncharacterized protein"... 135 4.1e-05 1
UNIPROTKB|Q14149 - symbol:MORC3 "MORC family CW-type zinc... 135 4.1e-05 1
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 137 0.00013 2
UNIPROTKB|F1MFY1 - symbol:MORC3 "Uncharacterized protein"... 131 0.00014 2
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 118 0.00015 2
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 126 0.00019 1
ZFIN|ZDB-GENE-030131-1502 - symbol:morc3a "MORC family CW... 127 0.00035 1
UNIPROTKB|F1P2D9 - symbol:MORC3 "Uncharacterized protein"... 126 0.00038 1
RGD|1559905 - symbol:Morc4 "MORC family CW-type zinc fing... 126 0.00038 1
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 119 0.00053 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 122 0.00056 1
SGD|S000001800 - symbol:SRP40 "Nucleolar serine-rich prot... 100 0.00072 2
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 117 0.00082 1
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 1260 (448.6 bits), Expect = 2.9e-133, Sum P(2) = 2.9e-133
Identities = 259/515 (50%), Positives = 341/515 (66%)
Query: 58 SETNS--QIGVSGSHL--RPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPRVDARGRSQ 113
S+TNS Q+ L +P P+ G P+G SL +Q+ RP + RG++Q
Sbjct: 200 SKTNSIFQLAPRSRQLLPKPANSAPIAA---GMEPSG--SL-VSQIHVARPPPEGRGKTQ 253
Query: 114 LLPRYWPRFTDQDLQQISGD----SNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFP 169
LLPRYWPR TDQ+L Q+SG SNS I PLFEK+LSASDAGRIGRLVLPK CAEAYFP
Sbjct: 254 LLPRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFP 313
Query: 170 PISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRL 229
PIS PEGLPLK+QD KGKEW+FQFRFWPNNNSRMYVLEGVTPCIQ+MQLQAGD VTFSR
Sbjct: 314 PISLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRT 373
Query: 230 EPEGKLVMGFRKASSASASDQDNEANKAGTGIPANGHAELADPSSWSKVDKSGYIATEAL 289
EPEGKLVMG+RKA++++A+ +++ + +N +WSK++KS +A + L
Sbjct: 374 EPEGKLVMGYRKATNSTATQMFKGSSEPNLNMFSNSLNPGCGDINWSKLEKSEDMAKDNL 433
Query: 290 GAKSSISRKRKNT-TLGSKSKRLKIENEDVIELKLTWEEAQGLLRXXXXXXXXXXXIEGY 348
+SS++ RK +G+KSKRL I++ DV+ELK+TWEEAQ LLR +E
Sbjct: 434 FLQSSLTSARKRVRNIGTKSKRLLIDSVDVLELKITWEEAQELLRPPQSTKPSIFTLENQ 493
Query: 349 EFEEYEDAPILGKPTIFATDNVGEKIQWVQCEDCSKWRKVPANARLPSKWTCSGNLWDPE 408
+FEEY++ P+ GK T+F + GE+ QWVQC+ C KWR++P + LP KW+CS NL DP
Sbjct: 494 DFEEYDEPPVFGKRTLFVSRQTGEQEQWVQCDACGKWRQLPVDILLPPKWSCSDNLLDPG 553
Query: 409 RSVCSVAQELREEQLEDLIAPNNPASSKKLKAAKQEPDCVEALEGLDTLANLAILGEGEG 468
RS CS EL + + L+ + ++L ++ ++ + + L++L N I GE
Sbjct: 554 RSSCSAPDELSPREQDTLVRQSKEFKRRRLASSNEKLNQSQDASALNSLGNAGITTTGEQ 613
Query: 469 LTASSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFHTLMLRREKK 528
+ ATTKHPRHR GCSCIVC QPPSGKG KHK +CTC VC VKRRF TLMLR+ K
Sbjct: 614 GEITVAATTKHPRHRAGCSCIVCSQPPSGKG-KHKPSCTCTVCEAVKRRFRTLMLRKRNK 672
Query: 529 ----QSEKDAETS---RKKQQQQKLPVPEKSADDD 556
Q+ + A++ R + + + +P E +A ++
Sbjct: 673 GEAGQASQQAQSQSECRDETEVESIPAVELAAGEN 707
Score = 67 (28.6 bits), Expect = 2.9e-133, Sum P(2) = 2.9e-133
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 610 PGSDSGSMIRLLQDAT---EKYLRQQRLSSSGVNTSSVDNEGLQ-GGVTGEKISNGITLD 665
PG+ SM+RLLQ A E YL+Q+ +S++ S D + G + + + T +
Sbjct: 714 PGASRVSMMRLLQAAAFPLEAYLKQKAISNTAGEQQSSDMVSTEHGSSSAAQETEKDTTN 773
Query: 666 GSH 668
G+H
Sbjct: 774 GAH 776
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 1210 (431.0 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 268/600 (44%), Positives = 368/600 (61%)
Query: 13 PENANAGSNCD----MQPSSCLNKPQQSSTLKDDSSTPHFGL-AVS---YASPSETNSQI 64
PE+ G D M SS L +P + L + +P F AV + SPS++N +
Sbjct: 167 PESTTTGHRLDAAGEMHESSPL-QPSLNMGLAVNPFSPSFATEAVEGMKHISPSQSN-MV 224
Query: 65 GVSGSHLRPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPRVDARGRSQLLPRYWPRFTD 124
S S++ P + + P A Q R GRP V+ RGR LLPRYWP++TD
Sbjct: 225 HCSASNILQKPSRPAI-----STPPVASK--SAQARIGRPPVEGRGRGHLLPRYWPKYTD 277
Query: 125 QDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDS 184
+++QQISG+ N I PLFEK LSASDAGRIGRLVLPK CAEAYFPPISQ EG+PLK+QD
Sbjct: 278 KEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDV 337
Query: 185 KGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFRKASS 244
+G+EW FQFR+WPNNNSRMYVLEGVTPCIQ+M LQAGD VTFSR++P GKL+MG RKA++
Sbjct: 338 RGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAAN 397
Query: 245 AS----------ASDQDNEANKAGTGIPA-NGHAELA-DPSSWSKVDKSGYIATEALGAK 292
A S +D ++ P+ NG + ++ P + + ++ + +E G +
Sbjct: 398 AGDMQGCGLTNGTSTEDTSSSGVTENPPSINGSSCISLIPKELNGMPEN--LNSETNGGR 455
Query: 293 -----SSISRKRKNTTLGSKSKRLKIENEDVIELKLTWEEAQGLLRXXXXXXXXXXXIEG 347
+ + K++ T+G+K+KRL + +E+ +EL+LTWEEAQ LLR IE
Sbjct: 456 IGDDPTRVKEKKRTRTIGAKNKRLLLHSEESMELRLTWEEAQDLLRPSPSVKPTIVVIEE 515
Query: 348 YEFEEYEDAPILGKPTIFATDNVGEKIQWVQCEDCSKWRKVPANARLPSKWTCSGNLWDP 407
E EEY++ P+ GK TI T GE+ +W C+DCSKWR++P +A L KWTC N+WD
Sbjct: 516 QEIEEYDEPPVFGKRTIVTTKPSGEQERWATCDDCSKWRRLPVDALLSFKWTCIDNVWDV 575
Query: 408 ERSVCSVAQELREEQLEDLIAPNNPASSKKLKAAKQEPDCVEALEGLDTLANLAILGEGE 467
R CS +E +E LE+++ ++ ++ E GLD LA+ A+LG+
Sbjct: 576 SRCSCSAPEESLKE-LENVLKVGREHKKRRTGESQAAKSQQEPC-GLDALASAAVLGDTI 633
Query: 468 GLTASSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFHTLMLRREK 527
G TT+HPRHR GCSCIVCIQPPSGKG +HK TC C VC TVKRRF TLM+RR+K
Sbjct: 634 G-EPEVATTTRHPRHRAGCSCIVCIQPPSGKG-RHKPTCGCTVCSTVKRRFKTLMMRRKK 691
Query: 528 KQSEKDAETSR-KKQQQQKLPVPEKSADDDPLSCSKTGNNS-P-NEKKVVSEGSDDDSSR 584
KQ E+D + KK++ +L +KS ++ ++ ++ NS P N++ V + + + SR
Sbjct: 692 KQLERDVTAAEDKKKKDMELAESDKSKEEKEVNTARIDLNSDPYNKEDVEAVAVEKEESR 751
Score = 42 (19.8 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 569 NEKKVVSEGSDDDSSRIKSSTSPFKGQIDLNIQPEREEEL 608
++KK E ++ D S+ + + +IDLN P +E++
Sbjct: 703 DKKKKDMELAESDKSKEEKEVNT--ARIDLNSDPYNKEDV 740
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 222 (83.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-WIFQFRFWPNN 199
LF+K L SD + R++LPKK AEA+ P + EG+P++++D G W F++R+WPNN
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNN 150
Query: 200 NSRMYVLEGVTPCIQNMQLQAGD-IVTFSRLEPEGKLVMGFRKASSASASDQDN 252
NSRMYVLE + LQ GD I+ + L ++ RKAS D N
Sbjct: 151 NSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQA-RKASEEEEVDVIN 203
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 204 (76.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 52/136 (38%), Positives = 79/136 (58%)
Query: 125 QDLQQISGDSNSVITP---LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQP-----EG 176
Q QQ N V+ LFEK L+ SD G++ RLV+PK+ AE YFP + +G
Sbjct: 18 QQQQQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKG 77
Query: 177 LPLKVQDSKGKEWIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLEPEG-K 234
L L +D +GK W F++ +W N+S+ YVL +G + ++ L AGD+V F R +G +
Sbjct: 78 LLLCFEDEEGKPWRFRYSYW--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGR 135
Query: 235 LVMGFRK-ASSASASD 249
+G+R+ S+S+SD
Sbjct: 136 FFIGWRRRGDSSSSSD 151
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 220 (82.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 65/199 (32%), Positives = 95/199 (47%)
Query: 49 GLAVSYASPSETNSQIGVS-GSHLRPVVQPPLVKQFHGN--LPNGADSLGETQVRNGRPR 105
G A SY S T+ + + +H+ P+ P K+ LP S E + RN
Sbjct: 161 GPASSYGVESFTSPSMAPNICTHMPPIEGPISAKEDKKPEILPRVVKSSDELETRNSNVE 220
Query: 106 VDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAE 165
+ L P + + ++ VI K L+ SD G +GR+VLPKK AE
Sbjct: 221 FHSETVGTL-PESKQGHDSRATKLLNSGEYQVI---LRKELTKSDVGNVGRIVLPKKDAE 276
Query: 166 AYFPPISQPEGLPLKVQDSK-GKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD-I 223
A PP+ Q + L L + D W F++R+WPNN SRMY+L+ ++ LQAGD I
Sbjct: 277 ASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVI 336
Query: 224 VTFSRLEPEGKLVMGFRKA 242
+ + L P GK ++ KA
Sbjct: 337 IIYKNLAP-GKFIIRGEKA 354
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 222 (83.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 47/103 (45%), Positives = 63/103 (61%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-WIFQFRFWPNN 199
+ K L+ SD G IGR+V+PK+ AEA+ P + Q EG+ LK+ D K + W F++RFWPNN
Sbjct: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
Query: 200 NSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFRKA 242
SRMYVLE ++ LQ GDI + KLV+ KA
Sbjct: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKA 398
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 66/225 (29%), Positives = 107/225 (47%)
Query: 67 SGSHLRPVVQPPLVKQFHGNLPNGADSLGETQVRNGRPR-VDARGRSQ-LLPRYWPRFTD 124
S S RP + + + + + S G+ + RPR V + RS PR P +
Sbjct: 105 STSAARPTDMAGVTSKRRSSSASTSSSSGDGAAVSDRPRGVTRKRRSGGRCPR--PAASL 162
Query: 125 QDLQ-QISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLP-LKVQ 182
+ + S + + + +K L SD ++GR+VLPKK AEAY P ++ +G L +
Sbjct: 163 RPAAPRPSSHHTAGLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMH 222
Query: 183 DSKGKE-WIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFRK 241
D + + W F++R+WPNN SRMYVLE ++ LQ GD + + + + V+G +K
Sbjct: 223 DLQNAQLWTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDENNRFVIGAKK 282
Query: 242 ASSASASDQDNEANKAGTGIPANGHAELADPSS--WSKVDKSGYI 284
A A+ T P A++ D S +VD S ++
Sbjct: 283 AGDQQAATVPQVDEHISTLFPIFPIAQVDDYLSPMAPQVDISAFV 327
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/140 (35%), Positives = 79/140 (56%)
Query: 121 RFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLK 180
R T + +Q D N + L +K+L SD G +GR+VLPK+ AE + P + +G+ +
Sbjct: 518 RSTASEKRQAKTDKN--LRFLLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIP 574
Query: 181 VQD-SKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGD-IVTFSRLEPEGKLVMG 238
++D + W ++RFWPNN SRMY+LE +++ +LQ GD IV +S ++ L+ G
Sbjct: 575 MEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRG 634
Query: 239 FRKASSASASDQDNEANKAG 258
K A A +Q N + G
Sbjct: 635 V-KVRRA-AQEQGNSSGAVG 652
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 58/188 (30%), Positives = 90/188 (47%)
Query: 75 VQPPLVKQFHGNLPNGADSLGETQVRNGRPR--VDARGRSQLLP-RYWPRFTDQ-DLQQI 130
+ P + K N N N P VD++ + +L + + +D+ D Q
Sbjct: 100 LDPRMTKMARINRKNAMMRSRNNSSPNSSPSELVDSKRQLMMLNLKNNVQISDKKDSYQQ 159
Query: 131 SGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKE-W 189
S N + L EK L SD G +GR+VLPK+ AEA P +S EG+ ++++D + W
Sbjct: 160 STFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSW 219
Query: 190 IFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLEPEGK-LVMGFRKASSASAS 248
F+++FW NN SRMYVLE ++ + GD +T E E K L S
Sbjct: 220 SFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTI--YEDESKNLYFAMNGNSGKQNE 277
Query: 249 DQDNEANK 256
++NE+ +
Sbjct: 278 GRENESRE 285
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 210 (79.0 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 96 ETQVRNGRPRVDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIG 155
ETQ+ P +D G + +PR + Q + N + L +K+L SD G +G
Sbjct: 534 ETQL----PTMDRAGSASAMPRQ--QVVPDRRQGWKPEKN--LRFLLQKVLKQSDVGNLG 585
Query: 156 RLVLPKKCAEAYFPPISQPEGLPLKVQD-SKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQ 214
R+VLPKK AE + P + +G+ L ++D + W ++RFWPNN SRMY+LE ++
Sbjct: 586 RIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVK 645
Query: 215 NMQLQAGD-IVTFSRLEPEGKLVMGFRKASSASASDQDNEANKAGT 259
LQ GD IV +S ++ L+ G K S + + A T
Sbjct: 646 TNGLQEGDFIVIYSDVKCGKYLIRGV-KVRQPSGQKPEAPPSSAAT 690
Score = 43 (20.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 2 NGGLKS-GSRDIPENANAGSNCDMQPSSCLNKPQQSSTLKDDSSTPHFGLAVSYASPSET 60
+G L+S S +IP +++ G C C++ + + S F + ++ +T
Sbjct: 144 SGALQSTASMEIPLDSSQGFGCGEGGGDCIDMMETFGYMDLLDSNEFFDTSAIFSQDDDT 203
Query: 61 NS 62
+
Sbjct: 204 QN 205
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 56/191 (29%), Positives = 101/191 (52%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP------------PISQPEGLPLKVQDSKGKE 188
LFEK L+ SD G++ RLV+PK+ AE YFP S +G+ L +D GK
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 189 WIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLEPEGK-LVMGFRK---AS 243
W F++ +W N+S+ YVL +G + +++ QL GD+V F R + + L +G+R+ S
Sbjct: 105 WRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGS 162
Query: 244 SASASDQDNEANKAGTGIPANGHAELADPSSWSKVDK-SGYIATEALGAKSSISRKRKNT 302
S+S + ++ N + G A + ++ S++S S Y A A ++ + ++
Sbjct: 163 SSSVAATNSAVNTSSMG--ALSYHQIHATSNYSNPPSHSEYSHYGAAVATAAETHSTPSS 220
Query: 303 TLGSKSKRLKI 313
++ S+ +++
Sbjct: 221 SVVGSSRTVRL 231
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP--EGLPLKVQDSKGKEWIFQFRFWP 197
LFEK ++ SD G++ RLV+PK AE +FP P S +G+ L +D GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW- 245
Query: 198 NNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLEPEGK-LVMGFRKASSASASDQD 251
N+S+ YVL +G + ++ L+AGD+V+FSR + + L +G++ S S SD D
Sbjct: 246 -NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK---SRSGSDLD 297
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 183 (69.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/91 (40%), Positives = 62/91 (68%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP--PISQPEGLPLKVQDSKGKEWIFQFRFWPN 198
+F+K+++ SD G++ RLV+PK+ AE +FP S +GL L +D GK W F++ +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW-- 91
Query: 199 NNSRMYVL-EGVTPCIQNMQLQAGDIVTFSR 228
N+S+ YV+ +G + +++ +L AGDIV+F R
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 179 (68.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 46/123 (37%), Positives = 72/123 (58%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP------------PISQPE-GLPLKVQDSKGK 187
LFEK L+ SD G++ RLV+PK+ AE YFP ++ E G+ L +D GK
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 188 EWIFQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLEPE-GKLVMGFRKASSA 245
W F++ +W N+S+ YVL +G + +++ L AGD+V F R + +L +G+R+ A
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEA 145
Query: 246 SAS 248
S+S
Sbjct: 146 SSS 148
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 183 (69.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP---EGLPLKVQDSKGKEWIFQFRFW 196
LFEK ++ SD G++ RLV+PK+ AE +FP P P +G+ + +D GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 197 PNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSR 228
N+S+ YVL +G + ++ L+AGD+VTF R
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 180 (68.4 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQ--PEGLPLKVQDSKGKEWIFQFRFWPN 198
+F+K+++ SD G++ RLV+PK+ AE YFP S G L QD GK W F++ +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYW-- 112
Query: 199 NNSRMYVL-EGVTPCIQNMQLQAGDIVTFSR 228
N+S+ YV+ +G + ++ +L AGDIV+F R
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 40/110 (36%), Positives = 68/110 (61%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PISQP----EGLPLKVQDSKGKEWIFQFRF 195
LFEK ++ SD G++ RLV+PK AE +FP P+ +G+ L +D GK W F++ +
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 196 WPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRL-EPEGKLVMGFRKAS 243
W N+S+ YVL +G + ++ +L AGD+++F R + + K +G++ S
Sbjct: 242 W--NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKS 289
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 173 (66.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/108 (36%), Positives = 68/108 (62%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQP-----EGLPLKVQDSKGKEWIFQFRF 195
+F+K+++ SD G++ RLV+PK+ AE YFP + +GL L +D G W F++ +
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 196 WPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLE-PEGKLVMGFRK 241
W N+S+ YV+ +G + +++ +L AGDIV+F R + KL + +R+
Sbjct: 82 W--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRR 127
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 176 (67.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 36/89 (40%), Positives = 57/89 (64%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNN 200
+F+K+L+ SD G++ RLV+PK+ AE +FP G L QD GK W F++ +W N+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYW--NS 92
Query: 201 SRMYVL-EGVTPCIQNMQLQAGDIVTFSR 228
S+ YV+ +G + ++ +L AGD V+F R
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
Score = 39 (18.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 428 APNNPASSKKLKAAKQEPDCVEALEGLDTLANLAILG 464
AP P+++KKL+ D E+ DT + + G
Sbjct: 251 APPQPSTTKKLRLFGV--DVEESSSSGDTRGEMGVAG 285
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 42/116 (36%), Positives = 70/116 (60%)
Query: 141 LFEKMLSASDAGRIGRLVLPKKCAEAYFP-PI---------SQPEGLPLKVQDSKGKEWI 190
LFEK ++ SD G++ RLV+PK+ AE +FP P S +G+ + ++D GK W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 191 FQFRFWPNNNSRMYVL-EGVTPCIQNMQLQAGDIVTFSRLE-PEGKLVMGFRKASS 244
F++ +W N+S+ YVL +G + ++ L+AGD+V F R P+ +L + ++ SS
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSS 307
>ZFIN|ZDB-GENE-040801-98 [details] [associations]
symbol:morc3b "MORC family CW-type zinc finger 3b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496
PROSITE:PS51050 ZFIN:ZDB-GENE-040801-98 GO:GO:0005524 GO:GO:0008270
Gene3D:3.30.565.10 SUPFAM:SSF55874 GeneTree:ENSGT00530000062983
HOVERGEN:HBG055625 OrthoDB:EOG48D0V4 EMBL:BX276127 IPI:IPI00611918
ProteinModelPortal:B8A4L4 Ensembl:ENSDART00000074450
eggNOG:NOG297259 HOGENOM:HOG000203121 Bgee:B8A4L4 Uniprot:B8A4L4
Length = 763
Score = 144 (55.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/126 (34%), Positives = 63/126 (50%)
Query: 361 KPTIFATDNVGEKIQ-WVQCEDCSKWRKVPAN-ARLPSKWTCSGNLWDPERSVCSVAQEL 418
K T+ D + + Q WVQC+ C KWR++P LP KW CS N +DP+ C V +EL
Sbjct: 387 KCTVAVEDVLKDPDQVWVQCDSCLKWRRLPDGITELPEKWFCSMN-YDPQFRNCQVEEEL 445
Query: 419 REEQLEDLIAPNNPASSKKLKAAKQEPDCVEALEGLDTLANLAILGEGEGLTASSQATTK 478
+E+ ED + P K+ + K LE + + + + + +G SSQA
Sbjct: 446 EDEE-EDQKSYPKPFKRKR-RNTKS------LLE--ENVPESSQIEDQQGALTSSQA--- 492
Query: 479 HPRHRP 484
PRH P
Sbjct: 493 -PRHPP 497
>UNIPROTKB|F1SGX2 [details] [associations]
symbol:MORC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0016235
"aggresome" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496
PROSITE:PS51050 GO:GO:0005524 GO:GO:0050821 GO:GO:0016605
GO:GO:0008270 GO:GO:0018105 GO:GO:0045111 GO:GO:0009791
GO:GO:0016235 GO:GO:0048147 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0051457 GO:GO:0007569 GeneTree:ENSGT00530000062983
OMA:ENYKRQC EMBL:CU638724 Ensembl:ENSSSCT00000013187 Uniprot:F1SGX2
Length = 940
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 376 WVQCEDCSKWRKVPANA-RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P +LP KW CS N DP+ C V +E +E DL+ P +
Sbjct: 412 WVQCDSCLKWRKLPDGIDQLPEKWYCSNNP-DPQFRNCDVPEEPEDE---DLVHPTYEKT 467
Query: 435 SKKLKAAKQEPDCVEALEGLDT 456
KK K E + + T
Sbjct: 468 YKKKDKEKSRTKLSETIPRIPT 489
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 140 (54.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 44/138 (31%), Positives = 67/138 (48%)
Query: 113 QLLPRYWPRFTDQ---DLQQISG-DSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYF 168
+L+P + D D + +G +SNS TP F K L+ SDA G +P+ CAE F
Sbjct: 87 RLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIF 146
Query: 169 PPI---SQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLE-GVTPCIQNMQLQAGDIV 224
P + ++P + +D G W +FR R ++L G + + +L AGD +
Sbjct: 147 PRLDYNAEPPVQTILAKDVHGDVW--KFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSI 204
Query: 225 TFSRLEPEGKLVMGFRKA 242
F R E G L +G R+A
Sbjct: 205 VFMRAE-NGDLCVGIRRA 221
Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 405 WDPERSVCSVAQELREEQLEDLIAPNNPASSKKLKAAKQ 443
W+P C + LRE++ L N + +K K +
Sbjct: 236 WNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAE 274
>RGD|1307924 [details] [associations]
symbol:Morc3 "MORC family CW-type zinc finger 3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0007569 "cell aging" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0016235
"aggresome" evidence=IEA;ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IEA;ISO] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA;ISO] [GO:0048147 "negative regulation of fibroblast
proliferation" evidence=IEA;ISO] [GO:0050821 "protein
stabilization" evidence=IEA;ISO] [GO:0051457 "maintenance of
protein location in nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR011124 Pfam:PF07496
PROSITE:PS51050 RGD:1307924 GO:GO:0050821 GO:GO:0016605
GO:GO:0008270 GO:GO:0018105 GO:GO:0045111 GO:GO:0009791
GO:GO:0016235 GO:GO:0048147 GO:GO:0051457 GO:GO:0007569
GeneTree:ENSGT00530000062983 CTD:23515 EMBL:CH474083
IPI:IPI00950809 RefSeq:NP_001100579.1 UniGene:Rn.17121
Ensembl:ENSRNOT00000064751 GeneID:304074 KEGG:rno:304074
UCSC:RGD:1307924 NextBio:652558 Uniprot:D4A552
Length = 679
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 376 WVQCEDCSKWRKVPANA-RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P +LP KW CS N DP+ C V +E +E DL+ P +
Sbjct: 147 WVQCDACLKWRKLPDGIDQLPEKWYCSNNP-DPQFRNCEVPEEPEDE---DLVHPTYEKT 202
Query: 435 SKKLKAAK 442
KK K
Sbjct: 203 YKKTSKEK 210
>UNIPROTKB|F1PFJ7 [details] [associations]
symbol:MORC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048147 "negative regulation of fibroblast
proliferation" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007569 "cell aging" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003594 InterPro:IPR011124
Pfam:PF07496 PROSITE:PS51050 GO:GO:0005524 GO:GO:0050821
GO:GO:0016605 GO:GO:0008270 GO:GO:0018105 GO:GO:0045111
GO:GO:0009791 GO:GO:0016235 GO:GO:0048147 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0051457 GO:GO:0007569
GeneTree:ENSGT00530000062983 CTD:23515 OMA:ENYKRQC
EMBL:AAEX03016519 RefSeq:XP_852752.1 Ensembl:ENSCAFT00000015342
GeneID:610219 KEGG:cfa:610219 Uniprot:F1PFJ7
Length = 939
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 376 WVQCEDCSKWRKVPANA-RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P +LP KW CS N DP+ C V +E +E DL+ P +
Sbjct: 410 WVQCDSCLKWRKLPDGIDQLPEKWYCSNNP-DPQFRNCDVPEEPEDE---DLVHPTYEKT 465
Query: 435 SKKLKAAK---QEPDCV 448
KK K ++P+ +
Sbjct: 466 YKKKDKEKFRIRQPEMI 482
>UNIPROTKB|Q14149 [details] [associations]
symbol:MORC3 "MORC family CW-type zinc finger protein 3"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IDA] [GO:0007569 "cell aging"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0018105
"peptidyl-serine phosphorylation" evidence=IDA] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IDA]
[GO:0050821 "protein stabilization" evidence=IDA] [GO:0051457
"maintenance of protein location in nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496 PROSITE:PS51050
GO:GO:0005524 GO:GO:0050821 GO:GO:0046872 GO:GO:0016605
GO:GO:0008270 GO:GO:0018105 GO:GO:0045111 GO:GO:0009791
GO:GO:0016235 GO:GO:0048147 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0051457 GO:GO:0007569 EMBL:AP000692 EMBL:D50926 EMBL:AK292957
EMBL:AP000693 IPI:IPI00436705 RefSeq:NP_056173.1 UniGene:Hs.421150
ProteinModelPortal:Q14149 SMR:Q14149 IntAct:Q14149 STRING:Q14149
PhosphoSite:Q14149 DMDM:108935853 PaxDb:Q14149 PRIDE:Q14149
Ensembl:ENST00000400485 GeneID:23515 KEGG:hsa:23515 UCSC:uc002yvi.3
CTD:23515 GeneCards:GC21P037692 HGNC:HGNC:23572 HPA:HPA018406
MIM:610078 neXtProt:NX_Q14149 PharmGKB:PA128394632 eggNOG:NOG252733
HOGENOM:HOG000246950 HOVERGEN:HBG055625 OMA:ENYKRQC
OrthoDB:EOG48D0V4 ChiTaRS:MORC3 GenomeRNAi:23515 NextBio:45949
ArrayExpress:Q14149 Bgee:Q14149 CleanEx:HS_MORC3
Genevestigator:Q14149 GermOnline:ENSG00000159256 Uniprot:Q14149
Length = 939
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 376 WVQCEDCSKWRKVPANA-RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P +LP KW CS N DP+ C V +E +E DL+ P +
Sbjct: 410 WVQCDACLKWRKLPDGMDQLPEKWYCSNNP-DPQFRNCEVPEEPEDE---DLVHPTYEKT 465
Query: 435 SKKLKAAK---QEPDCV 448
KK K ++P+ +
Sbjct: 466 YKKTNKEKFRIRQPEMI 482
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 137 (53.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 45/124 (36%), Positives = 66/124 (53%)
Query: 139 TP-LFEKMLSASDAGRIGRLVLPKKCAEAYFPPI--SQPE-GLPLKVQDSKGKEWIFQFR 194
TP +F K L+ASD G +P++ AE FPP+ SQP L +D G EW +FR
Sbjct: 155 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEW--RFR 212
Query: 195 FWPNNNSRMYVLE-GVTPCIQNMQLQAGDIVTFSRLEPEGKLVMGFRKAS----SASASD 249
R ++L G + + +L +GD V F R + +GKL +G R+AS +A+ S
Sbjct: 213 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGD-DGKLRLGVRRASQIEGTAALSA 271
Query: 250 QDNE 253
Q N+
Sbjct: 272 QYNQ 275
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 552 SADDDPLSCSKTGNNSPN 569
S P S T +NSPN
Sbjct: 520 SVSSSPSSVLLTNSNSPN 537
>UNIPROTKB|F1MFY1 [details] [associations]
symbol:MORC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0016235
"aggresome" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496
PROSITE:PS51050 GO:GO:0005524 GO:GO:0050821 GO:GO:0016605
GO:GO:0008270 GO:GO:0018105 GO:GO:0045111 GO:GO:0009791
GO:GO:0016235 GO:GO:0048147 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0051457 GO:GO:0007569 GeneTree:ENSGT00530000062983
OMA:ENYKRQC EMBL:DAAA02003568 IPI:IPI00725464
Ensembl:ENSBTAT00000015758 Uniprot:F1MFY1
Length = 960
Score = 131 (51.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 376 WVQCEDCSKWRKVPANA-RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P +LP KW CS N DP+ C V +E +E D++ P +
Sbjct: 423 WVQCDSCLKWRKLPDGIDQLPEKWYCSNNP-DPQFRNCDVPEEPEDE---DVVHPTYEKT 478
Query: 435 SKK 437
KK
Sbjct: 479 YKK 481
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 623 DATEKYLRQQRLSSSGVNTSSV-DNEGL-QGGVTGEKIS 659
D TE L+Q + SGV V D+E Q G TG S
Sbjct: 613 DDTEVKLQQSPMEQSGVEVEPVGDSEPCGQTGSTGTSTS 651
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 657 KISNGITLDGSHQDTDED 674
++SN + + SHQD D+D
Sbjct: 579 RLSNQV-FENSHQDDDDD 595
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 118 (46.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 58/210 (27%), Positives = 85/210 (40%)
Query: 44 STPHFGLAVSYASPSETNSQIGVS-----GSHLR--PVVQPPLVKQFHGNLPNGADSLGE 96
S P G V Y P + Q+ S +H+ P + P L+ Q H N+ AD E
Sbjct: 36 SLPPVGSRVVYF-PQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLH-NVTMHADV--E 91
Query: 97 TQVRNGRPRVDARGRSQLLPRYWPRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGR 156
T + + L P D L G + T F K L+ASD G
Sbjct: 92 TD--------EVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGG 143
Query: 157 LVLPKKCAEAYFPPIS---QPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCI 213
+P++ AE FPP+ QP L +D EW F+ F R + G + +
Sbjct: 144 FSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIF-RGQPKRHLLTTGWSVFV 202
Query: 214 QNMQLQAGDIVTFSRLEPEGKLVMGFRKAS 243
+L AGD V F + +L++G R+A+
Sbjct: 203 SAKRLVAGDSVLFI-WNDKNQLLLGIRRAN 231
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 524 RREKKQSEKDAETSRKKQQQQKLPVPEKSADDDPLSCSKTGNNSPNEKKVVSEGSDDDSS 583
++++ ++ + S+++QQQ L VPE + S +++VV + SS
Sbjct: 517 QQQQLSQQQQQQLSQQQQQQAYLGVPETHQPQSQAQSQSNNHLSQQQQQVVDNHNPSASS 576
Query: 584 R-IKSSTSPFKGQIDLNIQP 602
+ S+ S F N P
Sbjct: 577 AAVVSAMSQFGSASQPNTSP 596
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 56/220 (25%), Positives = 85/220 (38%)
Query: 120 PRFTDQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPI--SQPEGL 177
P T+ + D+ I F K+L+ASD G L++PK+ A FPP+ SQP
Sbjct: 102 PDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPIST 161
Query: 178 P-LKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQ-LQAGDIVTFSRLEPEGKL 235
L +D G+EW F+ F M+ G + L GDI R E G+L
Sbjct: 162 QNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGE-NGEL 220
Query: 236 VMGFRKASSASASDQDN--EANKAGTGIPANGHAELADPSSWSKVDKSGYIATEALGAKS 293
G R+A + AN G+ A+ ++ V Y K
Sbjct: 221 RFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVV----YKPRMQFEGKD 276
Query: 294 SISRKRKNTTLGSKSKRLKIENEDVIELKLTWEEAQGLLR 333
++ T +G ++ + LK+ W+E LR
Sbjct: 277 FSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLR 316
>ZFIN|ZDB-GENE-030131-1502 [details] [associations]
symbol:morc3a "MORC family CW-type zinc finger 3a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496 PROSITE:PS51050
ZFIN:ZDB-GENE-030131-1502 GO:GO:0005524 GO:GO:0008270
Gene3D:3.30.565.10 SUPFAM:SSF55874 GeneTree:ENSGT00530000062983
EMBL:BX571809 IPI:IPI00610163 Ensembl:ENSDART00000101085
OMA:DAIVFSK ArrayExpress:F1QGA2 Bgee:F1QGA2 Uniprot:F1QGA2
Length = 1079
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 62/289 (21%), Positives = 110/289 (38%)
Query: 376 WVQCEDCSKWRKVPANA---RLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNP 432
WVQC++C KWRK+P +LP KW C N DP+ C +E + E
Sbjct: 414 WVQCDECLKWRKLPDGIDMNKLPDKWFCRMNP-DPQFRRCEENEEAEDSADEASTCLKTY 472
Query: 433 ASSKKLKAAKQEPDCVEALEGL---DTLANLAILGEGEGLTASSQATTKHPRHRPGCSCI 489
++ +QE ++A E + N ++ + E L + + H P S
Sbjct: 473 KEYERNLKRQQEQKKIKAEETRLRQEQQKNAELIKQNESLKRMHSSLVRQLHHNPPSSPR 532
Query: 490 VCIQPPSGKGPKHKQTCTC---------NVC-LTVKRRFHTLMLRREKKQSEKDAETSRK 539
P + QT + NVC L+ +R ++R S+ +
Sbjct: 533 SPTVSWQAMSPHNSQTASSPSDNMPVISNVCSLSTPKR-----VKRPLSLSQSQTAKRAR 587
Query: 540 KQQQQKLPVP-EKSADDDPLSCSKTGNNSPNEKKVVSEGSDDDS---SRIKSSTSPFKGQ 595
+ P S L + N+ N + + S+DD + S+ P
Sbjct: 588 PHDDYSVNTPGSPSISAAALDVRTSPGNANNNVNISDDSSEDDDIVIDEVHSTPRPKPST 647
Query: 596 IDLNIQPEREEELSPGSDSGSMIRLLQDATEKYL--RQQRLSSSGVNTS 642
DL+ + + EE ++S + I L + +++ L + ++ G +TS
Sbjct: 648 FDLS-KVKTEE-----NNSDNAIELFMECSDQALVDTETEDTTKGPSTS 690
>UNIPROTKB|F1P2D9 [details] [associations]
symbol:MORC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007569 "cell aging" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0016235
"aggresome" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0048147 "negative regulation of fibroblast proliferation"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] InterPro:IPR003594 InterPro:IPR011124 Pfam:PF07496
PROSITE:PS51050 GO:GO:0005524 GO:GO:0050821 GO:GO:0016605
GO:GO:0008270 GO:GO:0018105 GO:GO:0045111 GO:GO:0016235
GO:GO:0048147 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0051457
GO:GO:0007569 GeneTree:ENSGT00530000062983 OMA:ENYKRQC
EMBL:AADN02010795 IPI:IPI01017301 Ensembl:ENSGALT00000025841
Uniprot:F1P2D9
Length = 926
Score = 126 (49.4 bits), Expect = 0.00038, P = 0.00038
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 376 WVQCEDCSKWRKVPANAR-LPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNPAS 434
WVQC+ C KWRK+P LP KW CS N DP+ C+V +E ++ DLI P +
Sbjct: 413 WVQCDACLKWRKLPDGIEHLPEKWYCSLNP-DPQFRDCNVPEEPEDD---DLIHPTYEKT 468
Query: 435 SKK 437
KK
Sbjct: 469 YKK 471
>RGD|1559905 [details] [associations]
symbol:Morc4 "MORC family CW-type zinc finger 4" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR003594
InterPro:IPR011124 Pfam:PF07496 PROSITE:PS51050 RGD:1559905
GO:GO:0005524 GO:GO:0008270 Gene3D:3.30.565.10 SUPFAM:SSF55874
GeneTree:ENSGT00530000062983 CTD:79710 IPI:IPI00370813
RefSeq:XP_001053814.3 RefSeq:XP_236536.6 UniGene:Rn.232652
Ensembl:ENSRNOT00000034925 GeneID:315914 KEGG:rno:315914
UCSC:RGD:1559905 Uniprot:E9PT63
Length = 928
Score = 126 (49.4 bits), Expect = 0.00038, P = 0.00038
Identities = 71/306 (23%), Positives = 128/306 (41%)
Query: 376 WVQCEDCSKWRKVPAN---ARLPSKWTCSGNLWDPERSVCSVAQELREEQLEDLIAPNNP 432
WVQC++C KWRK+P + LP++W C N P+ CSV +E +E++++ + +
Sbjct: 423 WVQCDECLKWRKLPGKVDPSTLPARWFCYYNP-HPKYKRCSVPEE--QERIDEDLHRSKA 479
Query: 433 ASSKKLKAAKQEPDCVEALEGLDTLANLAILGEGEGLTASSQATTKHPR-HRPGCSCIVC 491
++ KQ+P VE+ + +N + + +T + T + R + P +
Sbjct: 480 KQQVEIVEKKQKP--VES-DKYQVFSNPPKIPTPQNMTQLNDKTIGYERINSP--RLLPS 534
Query: 492 IQPPSGKGPKHKQTCTCNVCLTVKRRFHTLMLRREKKQSEKDAETSRKKQQQQKLPVPEK 551
+ S P+ K + + R++ ++ E+ AE RK Q L +
Sbjct: 535 VGEESRSPPRLKSLDSS--AFQISRKYKLIL-------GEEPAEKRRKIQTDTTLSPIDY 585
Query: 552 SADD-----DPLSCSKTGNNSPNEKKVVSEGSDDDSSRIKSSTSPFKGQIDLNIQPEREE 606
S + + G+NSP++ SE S P + + + RE
Sbjct: 586 SMSSYYRRVEAATAYPEGDNSPDKSS--SERSTPPH------LIPEYPESNKRAEQNREA 637
Query: 607 E-LSPGS---DSGSMI-RLLQDATEKYLRQQRLSSSGVNTSSVDNEGLQGGVTGEKISNG 661
L PGS D G ++ L+D K + ++ SS N N+G V G ++ G
Sbjct: 638 PALCPGSQDQDQGFLLPEELEDQMPKLVAEESNRSSE-NIDKDMNKGPFVAVVG--VAKG 694
Query: 662 ITLDGS 667
+ G+
Sbjct: 695 VADSGA 700
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 139 TPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISQP-------EGLP-LKV--QDSKGKE 188
T LF+K L+ SD G++ RLV+PKK A Y P IS EG+ ++V D ++
Sbjct: 175 TQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQ 234
Query: 189 WIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTF 226
W F++ +W ++ S ++ G ++ L+ DI+ F
Sbjct: 235 WKFRYCYWRSSQSFVFT-RGWNGFVKEKNLKEKDIIVF 271
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 111 RSQLLPRYWPRFT--DQDLQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYF 168
+ Q P + RF D D+ D+N V T F K+L+ SDA G +P+ CA++ F
Sbjct: 92 QQQFTPTNYSRFGRFDGDVD----DNNKVTT--FAKILTPSDANNGGGFSVPRFCADSVF 145
Query: 169 PPIS---QPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVT 225
P ++ P L V D G W F+ + R + G + + + +L AGD V
Sbjct: 146 PLLNFQIDPPVQKLYVTDIHGAVWDFR-HIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVV 204
Query: 226 FSRLEPEGKLVMGFRKASSASASD 249
F R + ++ +G R+ + S+SD
Sbjct: 205 FMRKSAD-EMFIGVRR-TPISSSD 226
>SGD|S000001800 [details] [associations]
symbol:SRP40 "Nucleolar serine-rich protein" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] SGD:S000001800
Pfam:PF05022 GO:GO:0005730 GO:GO:0006913 EMBL:BK006944 EMBL:X73541
GeneTree:ENSGT00700000104548 eggNOG:NOG318801 InterPro:IPR007718
RefSeq:NP_013018.3 GeneID:853967 KEGG:sce:YKR092C KO:K02927
RefSeq:NP_013020.3 GeneID:853969 KEGG:sce:YKR094C EMBL:L11275
EMBL:Z28317 PIR:S38170 ProteinModelPortal:P32583 DIP:DIP-2115N
IntAct:P32583 MINT:MINT-472548 STRING:P32583 PaxDb:P32583
EnsemblFungi:YKR092C CYGD:YKR092c OMA:DAXESAR OrthoDB:EOG4M68TB
NextBio:975404 Genevestigator:P32583 GermOnline:YKR092C
Uniprot:P32583
Length = 406
Score = 100 (40.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 526 EKKQSEKDAETSRKKQQQQKLPVPEKSADDDPLSCSKTGNNSPNEKKVVSEGSDDDSSRI 585
E K+ ++++ K+ ++ PE S+ + S +G++S +E + SE SD DSS
Sbjct: 125 ETKKRARESDNEDAKETKKAKTEPESSSSSES---SSSGSSSSSESESGSE-SDSDSSSS 180
Query: 586 KSSTSPFKGQIDLNIQPEREEELSPGSDSGSMIRLLQDATEKYLRQQRLSSSGVNTSSVD 645
SS+S + + + Q S SDS S D++ SSS ++SS D
Sbjct: 181 SSSSSDSESDSESDSQSSSS---SSSSDSSSD----SDSSSSDSSSDSDSSSSSSSSSSD 233
Query: 646 NEGLQGGVTGEKISNGITLDGSHQDTDEDHHGSLSVKASASISATG 691
++ + + S+G + S D+ D S S S S +G
Sbjct: 234 SDS-DSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSG 278
Score = 64 (27.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 242 ASSASASDQDNEANKAGTGIPANGHAELADPSSWSKVDKSGYIATEALGAKSSISRKRKN 301
+SS+ +SD + + + + ++ + +D S S+ D S ++ + + S S
Sbjct: 62 SSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESE 121
Query: 302 TTLGSKSKRLKIENEDVIELK 322
+ +K + + +NED E K
Sbjct: 122 SEDETKKRARESDNEDAKETK 142
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 139 TPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPIS-----QPEG--------LPLKVQDSK 185
T LF+K L+ SD G++ RLV+PKK A Y P IS + EG + + D
Sbjct: 154 TQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRA 213
Query: 186 GKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQLQAGDIVTFSRLE-PEG-KLVMGFRK 241
++W F++ +W ++ S ++ G ++ L+ D++ F + P K + G RK
Sbjct: 214 MRQWKFRYCYWKSSQSFVFT-RGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLEGQRK 270
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 691 680 0.00079 121 3 11 23 0.37 35
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 628 (67 KB)
Total size of DFA: 374 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 70.11u 0.11s 70.22t Elapsed: 00:00:03
Total cpu time: 70.11u 0.11s 70.22t Elapsed: 00:00:03
Start: Tue May 21 10:08:02 2013 End: Tue May 21 10:08:05 2013