BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>005565
MLKDFRRKLVDLELFTQSLEDWVLQKSLADPASGKQSFRSPFLMDELCRLDLALEGVLFQ
QLCRMPCSSYASYDLKEDEFLAVEDFLHAIVNGLWRTFWRKSGPLPFFLSCPRHPGSKFY
SVEKAISRGRIDELCGLSLISTTGNDLHVHWDQVMEFALFRSEILSGNDLKLSPSSICEA
LFYGIHVLISRSLSKYCTIGNDSIFVLVFDSKFGGVVKLGGDLGKLEFNSANPYQSVVEW
LKCHAEINVSSVDQIWNKLGNASWGDLGTLQVILATFYSIVQWNGPPRKSIASLASDHSL
RLQKRRLEYRLIDNGNAPVPFQQASHEQGEIVEVEQSDNPYSRKQASRLKLKQGEILVLE
DQRQGQKSFQIQESLALGNHFIYIAVSVDNPTELLTVYVGAHPSRLEPSWEDMSLWYQVQ
RQTKVLNTLRQEGVSSKYLPEIIASGRILHSGSCKKQTPGGCCDHPLCGTPILVTSPVGE
PLSLVLAHDGPLSSEEATRCCRDCLLALRTAALMNVQHGDICPENIICIVNMQGARSKLS
YMPISWGRAVLEDRDSPSINLQFSSSHALQHGKLCPSSDAESLVYLLYFVCGGTMEQVDS
IESALQWRERNWAKRSIQQQLGEVSALLKAFADYVDSLCGTPYPVDYEIWLKRLNRAVDG
STDRGKMIEEVAITLRLEDVAESSGTSGGGT

High Scoring Gene Products

Symbol, full name Information P value
AT2G40980 protein from Arabidopsis thaliana 4.6e-150

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005565
        (691 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063187 - symbol:AT2G40980 species:3702 "Arabi...  1276  4.6e-150  2


>TAIR|locus:2063187 [details] [associations]
            symbol:AT2G40980 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016772 "transferase
            activity, transferring phosphorus-containing groups" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR011009
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR
            SUPFAM:SSF56112 GO:GO:0016301 EMBL:AC004261 IPI:IPI00543351
            PIR:T02097 PIR:T02121 RefSeq:NP_181631.1 UniGene:At.42886
            ProteinModelPortal:Q9SLM4 PRIDE:Q9SLM4 EnsemblPlants:AT2G40980.1
            GeneID:818698 KEGG:ath:AT2G40980 TAIR:At2g40980
            HOGENOM:HOG000239088 InParanoid:Q9SLM4 OMA:PAWEDMN PhylomeDB:Q9SLM4
            ProtClustDB:CLSN2683651 Genevestigator:Q9SLM4 Uniprot:Q9SLM4
        Length = 617

 Score = 1276 (454.2 bits), Expect = 4.6e-150, Sum P(2) = 4.6e-150
 Identities = 250/495 (50%), Positives = 347/495 (70%)

Query:   179 EALFYGIHVLISRSLSKY-CTIGNDSIFVLVFDSKFXXXXXXXXXXXXXEFNSANPYQSV 237
             EALFY + +LI+RS+S+   +  ++ +F+L+ DS++             +F+  N Y+  
Sbjct:   131 EALFYAVRILIARSVSRLDFSQSSNCVFILLVDSQYGGVVKVEGDVNKLDFDLNNVYECA 190

Query:   238 VEWLKCHAEINVSSVDQIWNKLGNASWGDLGTLQVILATFYSIVQWNGPPRKSIASLASD 297
              +W+K H++I VS VD+IWNKLGNA+WGD+G LQV+ AT++SI+Q+ G PR SI  LA+D
Sbjct:   191 ADWIKKHSKIAVSPVDRIWNKLGNANWGDIGALQVVFATYHSIMQYFGAPRHSIEDLAAD 250

Query:   298 HSLRLQKRRLEYRLIDNG---NAPVPFQQASHEQGEIVEVEQSDNPYSRKQASRLKLKQG 354
             HS RL  RR E +L D     N    FQQ++    EIVEV++       + +  +KL+ G
Sbjct:   251 HSSRLHSRRQERQLGDTSLSENGMFRFQQSTMSP-EIVEVQEESTKIEPEPS--MKLEVG 307

Query:   355 EILVLEDQRQGQKSFQIQESLALGNHFIYIAVSVDNPTELLTVYVGAHPSRLEPSWEDMS 414
              +L LE+    QK +QI E L  G    +IA  VD+  + + +YVG+ PS+LEP+WEDM+
Sbjct:   308 SVLWLEESNY-QKGYQINEILTNGTLPYHIASPVDDAGKSVFLYVGSPPSQLEPAWEDMN 366

Query:   415 LWYQVQRQTKVLNTLRQEGVSSKYLPEIIASGRILHSGSCKKQTPGGCCDHPLCGTPILV 474
             LWYQVQRQTK+L+ ++Q G+SSKYLP++  SGRI+H G C+K + GG CDHP CGTPILV
Sbjct:   367 LWYQVQRQTKILSIMKQRGLSSKYLPQLHGSGRIIHPGQCQKPSSGGRCDHPWCGTPILV 426

Query:   475 TSPVGEPLSLVLAHDGPLSSEEATRCCRDCLLALRTAALMNVQHGDICPENIICIVNMQG 534
             T+PVGE ++  L ++G    EEA RCC DCL AL +++   ++HGDI PEN++ + +  G
Sbjct:   427 TTPVGETVA-DLVNEGRFGPEEAIRCCHDCLSALSSSSSAGIRHGDIRPENVVYVTS--G 483

Query:   535 ARSKLSYMPISWGRAVLEDRDSPSINLQFSSSHALQHGKLCPSSDAESLVYLLYFVCGGT 594
              R    ++ I WG AVLEDRD P++NL FSS++ALQ GKLC +SDAESL+Y+LYF C G 
Sbjct:   484 VRHPY-FVLIGWGHAVLEDRDRPAMNLHFSSTYALQEGKLCAASDAESLIYMLYF-CSGD 541

Query:   595 MEQVDSIESALQWRERNWAKRSIQQQLGEVSALLKAFADYVDSLCGTPYPVDYEIWLKRL 654
               ++DS+E ALQWRE +W+KR IQQ+LG++S +LKAF+DYVDSLCGTPYP+DY+IWL+RL
Sbjct:   542 FPELDSVEGALQWRETSWSKRLIQQKLGDISTVLKAFSDYVDSLCGTPYPLDYDIWLRRL 601

Query:   655 NRAVDGSTDRGKMIE 669
              R +  S D GK IE
Sbjct:   602 KRNL--SEDHGKEIE 614

 Score = 210 (79.0 bits), Expect = 4.6e-150, Sum P(2) = 4.6e-150
 Identities = 46/102 (45%), Positives = 59/102 (57%)

Query:     3 KDFRRKLVDLELFTQSLEDWVLQKSLADPASGKQSFRSPFLMDELCRLDLALEGVLFQQL 62
             +DF  +  D   FT+ LEDW    +L + AS    F  PF + EL + D ALEG+ FQQL
Sbjct:    32 RDFLSRFTDSAHFTEKLEDW-FASTLENSASEGPVFDVPFELVELQKFDYALEGISFQQL 90

Query:    63 CRMPCSSYASYD--LKEDEFLAVEDFLHAIVNGLWRTFWRKS 102
              RMP   YAS    L+   +LA+EDFLHA V  LW  FW ++
Sbjct:    91 TRMPSPVYASSSNALEAKAYLAIEDFLHATVKSLWEAFWSEA 132


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      691       678   0.00079  121 3  11 22  0.39    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  635 (67 KB)
  Total size of DFA:  394 KB (2190 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  56.94u 0.08s 57.02t   Elapsed:  00:00:02
  Total cpu time:  56.94u 0.08s 57.02t   Elapsed:  00:00:02
  Start:  Tue May 21 10:15:36 2013   End:  Tue May 21 10:15:38 2013

Back to top