BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005566
(691 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1
Length = 669
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 333/635 (52%), Gaps = 50/635 (7%)
Query: 38 FWQKLLELPLS-------LHWPSHRVHQACEAFAQNNCYTRHLAKIL-IHLTWCLQECIS 89
FW +LL + L C++ + N T +L ++ + L+ + IS
Sbjct: 32 FWNQLLSFSFTTPTNSADLKLLEEATVSVCKSLVEKNPRTGNLGSLIKVFLSRTKELKIS 91
Query: 90 SSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEPLPKEFVLDQNIEN 149
+ + I +A NA++I LK I E + LH + ++ P + IE
Sbjct: 92 AECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQ-LHFTYEDKTPGSYGTECEDLIEE 150
Query: 150 LV--MHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMT 207
L+ + ++ I L+D+ TY++ E + ++V +S QL L +H ++
Sbjct: 151 LLCCLIQLIVEIPLLDI---TYSISLEAVTTLIVFLSCQLFHKEILRESLIHKYLMRGRC 207
Query: 208 EESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATIVLLPFNYL 267
+V+ LL N+I + R S S+ + + G+L + S AT + F
Sbjct: 208 --LPYTSRLVKTLLYNFIRQER-SPPPGSHVFQQQTDGGGLLYGIASGVATGLWTVFT-- 262
Query: 268 VSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNP 327
+ G ++ L CS L ++S+ + +D+ T NP
Sbjct: 263 LGGVGSKATPQLDQCSPLA-------------NQSLLLLLVLANLTDAPD------TPNP 303
Query: 328 YCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASLFDTLGMYLADETAVLLLYSLVQGN 386
Y A+ + ++ + D + S P V ++ F SL+ L + A LLLY L+ N
Sbjct: 304 YRQAIMSFKNTQ----DSSAFSSSHPHVFQINFNSLYTALCEQQKSDQATLLLYMLLHQN 359
Query: 387 SGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMIL 446
YVL RTD++ L++PILE LY+ ++ + +YM LIILLIL++D FN SIH++IL
Sbjct: 360 GNVRTYVLARTDIENLVLPILEILYHVEERNSHHVYMALIILLILTEDDGFNRSIHEVIL 419
Query: 447 PSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSA 506
++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA LANM+ L
Sbjct: 420 KNITWYAERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLAALANMSAQFRSLHQ 479
Query: 507 YASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAELHIYTDFLRIVLEIL 565
YA+QR++SLF +LS+K+NK+ ++ +G+L DS D + +L++ + +R++LEI+
Sbjct: 480 YAAQRIISLFSLLSKKHNKVLEQATQSLRGSLDSNDSPLPDYAQDLNVIEEVIRMMLEII 539
Query: 566 NAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLDAQRVDGE 625
N+ LT +L NP +VYA+L++ ++F+ F++HP F ++++NI V+ FF+SRL+ E
Sbjct: 540 NSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQNIDLVISFFSSRLE--HAGAE 597
Query: 626 WSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLFK 660
SVE+VL+ I + D L+ +F L FK
Sbjct: 598 LSVERVLEIIKQGAVALPKDRLR----KFPELKFK 628
>sp|B4F766|DYM_RAT Dymeclin OS=Rattus norvegicus GN=Dym PE=2 SV=1
Length = 674
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 339/663 (51%), Gaps = 66/663 (9%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRH 72
EYL G ++ FW +L S S + C++ +NN T +
Sbjct: 15 EYL-KRLSGPEAISENDPFWNQLFSFSFSAPTSSTELKLLEEATISVCKSLVENNPRTGN 73
Query: 73 LA---KILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLK-YLIENAESENFEELH 128
LA K+ + T L+ +S+ + I + NA++I LK ++ E +E EEL
Sbjct: 74 LAALTKVFLARTRELR--LSAECQNHIFIWQTHNALFIICCLLKVFICEMSE----EELQ 127
Query: 129 LSLDESEPLPKEF----VLDQNIENLVMHSVLSFIALVDVSPH---TYNLHQELLNFMLV 181
L E LP + +L + E+L+ + S I L+ +P TY + E ++ M+V
Sbjct: 128 LHFTYEEKLPGTYTLCVLLGSDSEDLLEELLCSLIQLITDTPLLDITYEISVEAISAMIV 187
Query: 182 AMSTQLLSVPSLGPKDVHPFI--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSI 239
+S QL L H ++ + S LV + LL N+I R ++
Sbjct: 188 FLSCQLFHKEVLRQSISHKYLMQGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGTHVF 242
Query: 240 FSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVEN 299
+ + G+L + S AT + F + G +++P E
Sbjct: 243 PQQSDGGGLLYGLASGVATGLWTVFT--LGGVGSKAASP-------------------EL 281
Query: 300 DESITDRSDDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-VVRLP 358
+ ++S + NPY A+ + ++ + D S P ++
Sbjct: 282 TSPLANQSLLLLLVLVNLTDAPDIP-NPYRQAVTSFKNTQ----DSSPFPSSVPHTFQIN 336
Query: 359 FASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTP 418
F SL+ TL + A LLLY+L+ N+ Y+L RTD++ L++PILE LY+ ++
Sbjct: 337 FNSLYTTLCEQQTSDQATLLLYTLLHQNANVRTYMLARTDMENLVLPILEILYHVEERNS 396
Query: 419 NQIYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNL 478
+ +YM LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+
Sbjct: 397 HHVYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNM 456
Query: 479 SKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNL 537
++ RD YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L
Sbjct: 457 TRTRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSL 516
Query: 538 TEQDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHP 597
+ D D + +L + + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP
Sbjct: 517 SSSDVPLPDYAQDLSVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHP 576
Query: 598 RFNELLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWML 657
F ++++NI V+ FF+SRL + E SVE+VL+ I + D LK +F L
Sbjct: 577 SFQDIMQNIDLVISFFSSRL--LQSGAELSVERVLEIIKQGVVALPKDRLK----KFPEL 630
Query: 658 LFK 660
FK
Sbjct: 631 KFK 633
>sp|Q8CHY3|DYM_MOUSE Dymeclin OS=Mus musculus GN=Dym PE=2 SV=1
Length = 669
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 328/656 (50%), Gaps = 57/656 (8%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRH 72
EYL G +S FW +L S + C++ +NN T +
Sbjct: 15 EYL-KKLSGPESISENDPFWNQLFSFSFPAPTSSSELKLLEEATISVCKSLVENNPRTGN 73
Query: 73 LAKIL-IHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSL 131
LA + + L+ + +S+ + I + NA++I LK I E + LH +
Sbjct: 74 LAALTKVFLSRTRELRLSAECQNHIFIWQTHNALFIICCLLKVFIRELSEEELQ-LHFTY 132
Query: 132 DESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPH---TYNLHQELLNFMLVAMSTQLL 188
+E P + E+L+ + S + L+ +P TY + E ++ M+V +S QL
Sbjct: 133 EEKSP----GSYSSDSEDLLEELLCSLVQLITDTPLLDITYEIAVEAISAMVVFLSCQLF 188
Query: 189 SVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGV 248
L H ++ +V+ LL N+I R ++ + + G+
Sbjct: 189 HKEVLRQSISHKYLMQGPC--LPYTSKLVKTLLYNFI-RQEKPPPPGTHVFPQQSDGGGL 245
Query: 249 LQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSD 308
L + S AT + F G GS K + E + ++
Sbjct: 246 LYGLASGVATGLWTVFTL----GGAGS-------------------KAAASPELTSPLAN 282
Query: 309 DSATSDSLAKSSTHF--TVNPYCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASLFDT 365
S + + T NPY A+ + ++ + D S P ++ F SL+
Sbjct: 283 QSLLLLLVLVNLTDAPDIPNPYRQAVSSFKNTQ----DSSPFPSSIPHTFQINFNSLYTA 338
Query: 366 LGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLL 425
L + A LLLY+L+ NS YVL RTD++ L++PILE LY+ ++ + +YM L
Sbjct: 339 LCEQQTSDQATLLLYTLLHQNSNVRTYVLARTDMENLVLPILEILYHVEERNSHHVYMAL 398
Query: 426 IILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVY 485
IILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ RD Y
Sbjct: 399 IILLILTEDDGFNRSIHEVILRNITWYSERVLTEISLGSLLILVVIRTIQYNMTRTRDKY 458
Query: 486 LHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFA 544
LHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G L+ D
Sbjct: 459 LHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGPLSSSDVPL 518
Query: 545 EDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLE 604
D + +L + + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F ++++
Sbjct: 519 PDYAQDLSVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQ 578
Query: 605 NIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLFK 660
NI V+ FF+SRL + E SVE+VL+ I + D LK +F L FK
Sbjct: 579 NIDLVISFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLK----KFPELKFK 628
>sp|Q7RTS9|DYM_HUMAN Dymeclin OS=Homo sapiens GN=DYM PE=1 SV=1
Length = 669
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 210/659 (31%), Positives = 339/659 (51%), Gaps = 63/659 (9%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRH 72
EYL G +S FW +LL S + C + +NN T +
Sbjct: 15 EYL-KKLSGTESISENDPFWNQLLSFSFPAPTSSSELKLLEEATISVCRSLVENNPRTGN 73
Query: 73 L-AKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSL 131
L A I + L+ + +S+ + I + NA++I LK I E + LH +
Sbjct: 74 LGALIKVFLSRTKELKLSAECQNHIFIWQTHNALFIICCLLKVFICQMSEEELQ-LHFTY 132
Query: 132 DESEP--LPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLS 189
+E P + + +++ I L+D+ TY + E ++ M+V +S QL
Sbjct: 133 EEKSPGNYSSDSEDLLEELLCCLMQLITDIPLLDI---TYEISVEAISTMVVFLSCQLFH 189
Query: 190 VPSLGPKDVHPFI--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPG 247
L H ++ + S LV + LL N+I R ++ + + G
Sbjct: 190 KEVLRQSISHKYLMRGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGAHVFPQQSDGGG 244
Query: 248 VLQRVGSAAATIVLLPFNYL-VSSNGEGS---SNPLTDCSLLVLLVLIHYHKCVENDESI 303
+L + S AT + F V S S S+PL + SLL+LLVL ++
Sbjct: 245 LLYGLASGVATGLWTVFTLGGVGSKAAASPELSSPLANQSLLLLLVLA----------NL 294
Query: 304 TDRSDDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASL 362
TD SD NPY A+ + ++ + D S P ++ F SL
Sbjct: 295 TDASD---------------APNPYRQAIMSFKNTQ----DSSPFPSSIPHAFQINFNSL 335
Query: 363 FDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIY 422
+ L + A LLLY+L+ NS Y+L RTD++ L++PILE LY+ ++ + +Y
Sbjct: 336 YTALCEQQTSDQATLLLYTLLHQNSNIRTYMLARTDMENLVLPILEILYHVEERNSHHVY 395
Query: 423 MLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLR 482
M LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ R
Sbjct: 396 MALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTRTR 455
Query: 483 DVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQD 541
D YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L+ D
Sbjct: 456 DKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSSND 515
Query: 542 SFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNE 601
D + +L++ + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F +
Sbjct: 516 VPLPDYAQDLNVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQD 575
Query: 602 LLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLFK 660
+++NI V+ FF+SRL + E SVE+VL+ I + D LK +F L FK
Sbjct: 576 IMQNIDLVISFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLK----KFPELKFK 628
>sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1
Length = 669
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 331/652 (50%), Gaps = 49/652 (7%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVHQA---------CEAFAQNNCYT 70
EYL G S FW +LL LS P++ C++ +NN T
Sbjct: 15 EYL-KKLSGMDSISENEPFWNQLLSFTLST--PTNSADSKLLEEGTLSICKSLIENNPRT 71
Query: 71 RHL-AKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHL 129
+L A I + L+ + IS+ + I +A NA++I +K E LH
Sbjct: 72 GNLGALIRVFLSRTKELKISAECQNQLFIWQAHNALFIICCLIKVFTSQVSEEELL-LHF 130
Query: 130 SLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLS 189
+ ++P E + E L+ ++ I + + TY++ E + ++V +S QL
Sbjct: 131 TYRATDPGNYEADTEDLFEELLF-CLIQLIVEIPLLDLTYSILLEAVTALIVLLSYQLFH 189
Query: 190 VPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVL 249
L +H + +V+ LL N+I R S S+ +++ G+L
Sbjct: 190 KDILHESPIHKHLMNGRC--LPYTSRLVKTLLYNFI-RQEKSPPPGSHIFPQQQDGGGLL 246
Query: 250 QRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDD 309
+ S A+ + + V + G S P E + ++S
Sbjct: 247 YGLASGVASGI-----WTVLTLGGVGSKPTPQ---------------QEQSSPLANQSLL 286
Query: 310 SATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMY 369
S S NP+ ++ ++ + + N HS ++ F SL+ +L
Sbjct: 287 LLLVLSNLTDSPD-CPNPFRQSVTFFKNTQDSSVSPTPNPHS---FQINFNSLYTSLCEQ 342
Query: 370 LADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILL 429
+ A LLLY+L+ NS YVL R+D++ L++PILE LY+ ++ + +YM LIILL
Sbjct: 343 QKSDQATLLLYTLLHQNSNVRTYVLARSDMENLVLPILEILYHVEERNSHHVYMALIILL 402
Query: 430 ILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTT 489
IL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT+++N+++ RD YLHT
Sbjct: 403 ILTEDDGFNRSIHEVILKNITWYTERVLTEISLGSLLILVVIRTIQFNMTRTRDKYLHTN 462
Query: 490 CLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMS 548
CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L +S D +
Sbjct: 463 CLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLGSDESPLPDYA 522
Query: 549 AELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYT 608
+L++ + +R++LEI+N+ LT +L NP +VYA+L++ E+F+ F+SHP F ++++NI
Sbjct: 523 QDLNVIEEVIRMMLEIINSCLTNSLHHNPNMVYALLYKRELFEQFRSHPSFQDIMQNIDM 582
Query: 609 VLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLFK 660
V+ FF+ RL+ D SVE+VL+ I + D L+ +F L FK
Sbjct: 583 VISFFSLRLEQAGAD--LSVERVLEVIKQGAVALPKDRLR----KFPELKFK 628
>sp|Q5RAW5|DYM_PONAB Dymeclin OS=Pongo abelii GN=DYM PE=2 SV=1
Length = 669
Score = 258 bits (660), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 207/661 (31%), Positives = 333/661 (50%), Gaps = 82/661 (12%)
Query: 28 GEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRHL-AKILIH 79
G +S FW +LL S + C + +NN T +L A I +
Sbjct: 22 GTESISENDPFWNQLLSFSFPAPTSSTELKLLEEATISVCRSLVENNPRTGNLGALIKVF 81
Query: 80 LTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEP--L 137
L+ + +S+ + I + NA++I LK I E + LH + +E P
Sbjct: 82 LSRTKELKLSAECQNHIFIWQTHNALFIICCLLKVFICQMSEEELQ-LHFTYEEKSPGNY 140
Query: 138 PKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKD 197
+ + +++ I L+D+ TY + E ++ M+V +S QL L
Sbjct: 141 SSDSEDLLEELLCCLMQLITDIPLLDI---TYEISVEAISTMVVFLSCQLFHKEVLRQSI 197
Query: 198 VHPFI--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSA 255
H ++ + S LV + LL N+I R ++ + + G+L + S
Sbjct: 198 SHKYLMRGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGAHVFPQQSDGGGLLYGLASG 252
Query: 256 AATIVLLPFNYLVSSNGEGS--------SNPLTDCSLLVLLVLIHYHKCVENDESITDRS 307
AT + F G GS S+PL + SLL+LLVL ++TD S
Sbjct: 253 VATGLWTVFTL----GGVGSKVAASPELSSPLANQSLLLLLVLA----------NLTDAS 298
Query: 308 DDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-------VVRLPFA 360
D NPY A+ M + S P ++ F
Sbjct: 299 D---------------APNPYRQAI----------MSFKNTQDSSPFPPLIPHAFQINFN 333
Query: 361 SLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQ 420
SL+ L + A LLLY+L+ NS Y+L RTD++ L++PILE LY+ ++ +
Sbjct: 334 SLYTALCEQQTSDQATLLLYTLLHQNSNIRTYMLARTDMENLVLPILEILYHVEERNSHH 393
Query: 421 IYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSK 480
+YM LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++
Sbjct: 394 VYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTR 453
Query: 481 LRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTE 539
RD YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L+
Sbjct: 454 TRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSS 513
Query: 540 QDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRF 599
D D + +L++ + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F
Sbjct: 514 NDVPLPDYAQDLNVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSF 573
Query: 600 NELLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLF 659
++++NI V+ FF+SRL + E SVE+VL+ I + D LK +F L F
Sbjct: 574 QDIMQNIDLVITFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLK----KFPELKF 627
Query: 660 K 660
K
Sbjct: 628 K 628
>sp|Q28BM0|DYM_XENTR Dymeclin OS=Xenopus tropicalis GN=dym PE=2 SV=1
Length = 669
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 327/649 (50%), Gaps = 58/649 (8%)
Query: 28 GEKSFPLASDFWQKLLELPLSLHWPSHRVHQA---------CEAFAQNNCYTRHL-AKIL 77
G S FW +LL S P++ C++ +NN T +L A I
Sbjct: 22 GTDSISENEPFWNQLLSFSFST--PTNSADSKLLEEGTLSICKSLIENNPRTGNLGALIR 79
Query: 78 IHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEPL 137
+ L+ + IS+ + I +A NA++I +K E LH + ++P
Sbjct: 80 VFLSRTKELKISAECQNQLFIWQAHNALFIICRLIKVFTSQISEEELL-LHFTYRPADPG 138
Query: 138 PKEFVLDQNIENLVMHSVLSFIALVDVSPH---TYNLHQELLNFMLVAMSTQLLSVPSLG 194
E + ENL + I L+ P TY++ E + ++V +S QL L
Sbjct: 139 NYE----SDTENLFEELLFCLIQLIVEIPLLDLTYSILLEAVTALIVLLSYQLFRKDILH 194
Query: 195 PKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGS 254
+H + +V+ LL N+I R S S+ +++ G+L + S
Sbjct: 195 ESPIHRHLMKGPC--LPYTSRLVKTLLYNFI-RQEKSPPPGSHIFPQQQDGGGLLYGLAS 251
Query: 255 AAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSD 314
A+ + +++ G GS K E + ++ S
Sbjct: 252 GVASGIWT----VLTLGGVGS-------------------KPTPQQEQSSPLANQSLLLL 288
Query: 315 SLAKSSTHF--TVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLAD 372
+ + T NP+ ++ R+ + + N HS ++ F SL+ L
Sbjct: 289 LVLSNLTDAPDCPNPFRQSVTFFRNTQDSSVSPTPNPHS---FQINFNSLYTALCEQQKS 345
Query: 373 ETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILS 432
+ A LLLY+L+ NS YVL R+D++ L++PILE LY+ + + +YM LIILLIL+
Sbjct: 346 DQATLLLYTLLHQNSNVRTYVLARSDMENLVLPILEILYHVEDRNSHHVYMALIILLILT 405
Query: 433 QDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLA 492
+D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA
Sbjct: 406 EDDGFNRSIHEVILKNITWYTERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLA 465
Query: 493 TLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAEL 551
LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L +S D + +L
Sbjct: 466 ALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLGSDESPLPDYAQDL 525
Query: 552 HIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLD 611
++ + +R++LEI+N+ LT +L NP +VYA+L++ E+F+ F+SHP F ++++NI V+
Sbjct: 526 NVIEEVIRMMLEIINSCLTNSLHHNPNMVYALLYKRELFEQFRSHPSFQDIMQNIDMVIS 585
Query: 612 FFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKVKADRFWMLLFK 660
FF+ RL+ D SVE+VL+ I + D L+ +F L FK
Sbjct: 586 FFSLRLEQAGAD--LSVERVLEVIKQGAVALPKDRLR----KFPELKFK 628
>sp|Q293C2|DYM_DROPS Dymeclin OS=Drosophila pseudoobscura pseudoobscura GN=GA20914 PE=3
SV=1
Length = 700
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 318/667 (47%), Gaps = 104/667 (15%)
Query: 38 FWQKLLELPLSLHWPSH-------RVHQACEAFAQNNCYTRHLAKILIHLTWCLQECIS- 89
FW LL + L S R+ C++F NN T + ++ E +S
Sbjct: 33 FWNGLLNYNIVLPENSQDQLNLDSRLETLCQSFIGNNLKTGNFGSLVTVFLEKTSELLSL 92
Query: 90 SSGTASVAIMKAINAVYISSVFLKYLIENAES----ENFEEL------HLSLDESEPLPK 139
S +++ + + NA++I +KY+ E ++FE L +++ + P
Sbjct: 93 SDQESNMHVWQTFNALFIIRTLVKYINETGSEFQLLQHFEALPSAELVQAAVELQQQTPA 152
Query: 140 E---------------------FVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNF 178
E FV E + ++++ I ++ V TY+LH E +N
Sbjct: 153 ESATIAIEATEQAAAAAASAPVFVDGAKFETFI-DALVNLIVVIPVKEFTYHLHLEAVNM 211
Query: 179 MLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSS-- 236
++ +S L + V F + ++++ S + + + P SSS
Sbjct: 212 LITLLSVHLFAQQPTEKSIV--FRTVFKCQHANVLMSALLHFVARMVEVPHTMFGSSSAG 269
Query: 237 ----------YSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLV 286
SIF+ Q VL + +A + L F + PL + SLL+
Sbjct: 270 SIVFGIAESLLSIFTFRKQQDVL-KASNAVGGELSLQFR---------THYPLANQSLLL 319
Query: 287 LLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYCNALENA-RDIEFGHMDL 345
+L+L ++ C A ENA R FG D
Sbjct: 320 ILILTNH-----------------------------------CTAQENAYRASLFGCADS 344
Query: 346 EGNAHSGPV-VRLPFASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLM 404
+ + G V ++ F+++++TL + + A LLLY L+ N F +V+ + DL+ L++
Sbjct: 345 KDSPKQGTVSFQIDFSAVYETLCRIVTIDQATLLLYLLLHRNERFYRFVMQQQDLEQLVI 404
Query: 405 PILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGS 464
PIL+TLYNA + IYM LI+LLILS+D FN ++H ++L ++ WY E + + SLG
Sbjct: 405 PILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLKNITWYTERSISEISLGG 464
Query: 465 LLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYN 524
+L++I+IRT++YN+ K+RD YLHT CLA LANM+ H L Y +QRLVSLF L+RK+
Sbjct: 465 ILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHFRALHPYVAQRLVSLFETLARKHT 524
Query: 525 KIADRRDDKKGN--LTEQDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYA 582
++ + + + + AEDM +L + + LR+VLEILN+ LT L P +VY
Sbjct: 525 RLDAQLKEPADSAVFVNVVTTAEDMLQDLSVLEEVLRMVLEILNSCLTNQLVYCPNLVYT 584
Query: 583 ILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLD-AQRVDGEWSVEKVLQSIIINCRS 641
+L++ VF+ F+SH F ++++NI V+ FF+SRL Q GE V +VL+ I
Sbjct: 585 LLYKRSVFEGFRSHHAFQDVVQNIDMVVGFFSSRLQRVQEQRGELGVNEVLEVISKGASQ 644
Query: 642 WRGDGLK 648
W D L+
Sbjct: 645 WSSDRLR 651
>sp|Q7KNA0|DYM_DROME Dymeclin OS=Drosophila melanogaster GN=CG8230 PE=1 SV=1
Length = 699
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 196/684 (28%), Positives = 323/684 (47%), Gaps = 114/684 (16%)
Query: 26 FVGEKSFPLASD---FWQKLLELPLSLHWPSH-------RVHQACEAFAQNNCYTRHLAK 75
FVG + +A D FW LL + L S R+ C++F NN T +
Sbjct: 20 FVGRQH--IAHDDEAFWNGLLNYNIVLPENSQDQLNLDSRLEALCQSFIGNNLKTGNFGS 77
Query: 76 ILIHLTWCLQECIS-SSGTASVAIMKAINAVYISSVFLKYLIENAES----ENFEEL--- 127
++ E +S S +++ + + NA++I +KY+ E ++FE +
Sbjct: 78 LVTVFLEKTSELLSLSDQESNMHVWQTFNALFIIRSLVKYINETGSEFQLLQHFEAMPNA 137
Query: 128 ---------------------HLSLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSP 166
+ ++S ++D + + ++++ I ++ V
Sbjct: 138 ELLQAALEQQQQTPAESATIAMEATEQSAAAAVPVIVDGSKFETFIDALVNLIVVIPVKE 197
Query: 167 HTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYIT 226
TY+LH E +N ++ +S L + V F + ++++ S + + +
Sbjct: 198 FTYHLHLEAVNMLITLLSVHLFAQQPTDKSIV--FRTVFKCQHANVLMSALLHFVARIVE 255
Query: 227 RPRISVNSSS------------YSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEG 274
P SSS SIF+ QP +L + G AA GE
Sbjct: 256 VPHTMFGSSSAGSFVFGIAESLLSIFTFRKQPDIL-KAGQAAG-------------GGEL 301
Query: 275 SSN-----PLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYC 329
S PL + SLL++L+L ++ C
Sbjct: 302 SQRFRTHYPLANQSLLLILILTNH-----------------------------------C 326
Query: 330 NALENA-RDIEFGHMDLEGNAHSGPV-VRLPFASLFDTLGMYLADETAVLLLYSLVQGNS 387
A +NA R F D + + G V ++ F+++++TL + + A LLLY L+ N
Sbjct: 327 TAQDNAYRTSLFSCADSKDSPKQGAVSFQIDFSAVYETLCTIVTIDQATLLLYLLLHRNE 386
Query: 388 GFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMILP 447
F +V+ + DL+ L++PIL+TLYNA + IYM LI+LLILS+D FN ++H ++L
Sbjct: 387 RFYRFVMQQQDLEQLVIPILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLK 446
Query: 448 SVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAY 507
++ WY E + + SLG +L++I+IRT++YN+ K+RD YLHT CLA LANM+ H L Y
Sbjct: 447 NITWYTERTISEISLGGILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHFRALHPY 506
Query: 508 ASQRLVSLFYMLSRKYNKIADRRDDKKGN--LTEQDSFAEDMSAELHIYTDFLRIVLEIL 565
+QRLVSLF L+RK+ ++ + + + + EDM +L + + LR+VLEIL
Sbjct: 507 VAQRLVSLFETLARKHTRLDAQLKEPADSAVFVNVSTTPEDMLQDLSVLEEVLRMVLEIL 566
Query: 566 NAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLD-AQRVDG 624
N+ LT L P +VY +L++ VF+ F+SH F ++++NI V+ FF+SRL Q G
Sbjct: 567 NSCLTNQLVYCPNLVYTLLYKRSVFEGFRSHHAFQDVIQNIDMVVGFFSSRLQRVQEQRG 626
Query: 625 EWSVEKVLQSIIINCRSWRGDGLK 648
E V +VL+ I W D L+
Sbjct: 627 ELGVNEVLEVISKGASQWSSDRLR 650
>sp|B0G194|DYM_DICDI Dymeclin OS=Dictyostelium discoideum GN=dym PE=3 SV=1
Length = 931
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 263/516 (50%), Gaps = 86/516 (16%)
Query: 56 VHQACEAFAQNNCYTRHLAKILIHLTWCL----QECISSS-------GTASVAIMKA--- 101
+++ + NN T++ +IL+H L Q+ I+ S G+ I+
Sbjct: 118 LNELSKQLVSNNLKTKNFNRILMHFINKLNLFNQQLITISESMKKNKGSKQQLILDQSVE 177
Query: 102 ----------INAVYISSVFLKYLIENAESENFEELHLSLDES--EPLPKEFVLDQNIEN 149
+N + F KY+IEN + N + E+ + +P + +L
Sbjct: 178 IQLYTHQQFLVNYTILIQTFSKYIIENMDHVNIIQQFTGDSENSFKTIPFDLIL------ 231
Query: 150 LVMHSVLSFIA--LVDVSPHTYNLHQELLNFMLVAMSTQL-LSVPSLGPKDVHPF--IDA 204
S+L F++ L D S Y+LH LL F+L+ ST++ L +P++ + +D
Sbjct: 232 ----SILGFLSNELRDCS---YDLHDVLLRFILILFSTEMYLPLPTIQENYLTDTFTVDF 284
Query: 205 AMTEESSLVCSVVRRLLLNYITRPRIS--VNSSSYSIFSE--ENQP------GVLQRVGS 254
+ E + ++ +L++ + S V S +++F+ EN+P +L +GS
Sbjct: 285 SFYELLAPKTNIFLNILMDTVYNNPNSPIVYSFIFNLFNNIIENKPPPSTSNSLLDSIGS 344
Query: 255 AAATIVLLPFN---YLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSA 311
AA+ ++LLP N Y N + N +T+ S LLVL+ Y+
Sbjct: 345 AASYLLLLPLNAYKYFFPQNN-ATGNSMTELSTFNLLVLVQYN----------------- 386
Query: 312 TSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLA 371
+ NP+ L N +D +F +DL + + +R+ L++++ +
Sbjct: 387 ----------YPKGNPFRKILSNIQDKDFS-IDLLNSNPNNHQIRISMQQLYESIIKSPS 435
Query: 372 DETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLIL 431
+ +LLLY L+Q NS F YV RTDLD LL+P+++ LYN+ ++ P Q+ M+LII+LIL
Sbjct: 436 SDKNILLLYYLLQENSFFFRYVQSRTDLDNLLLPMIQILYNSFEEKPQQVNMILIIILIL 495
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
SQDS FN ++H +I+ + WYKE LL SLG +L+++LI+++ NLSKLRD +LHT CL
Sbjct: 496 SQDSLFNENVHSLIVHQILWYKERLLIDVSLGGILMVVLIKSIILNLSKLRDAHLHTNCL 555
Query: 492 ATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIA 527
A LAN++ ++ + Y + RLV L +LS++Y K+
Sbjct: 556 AILANLSSNISHIHPYVANRLVKLLEILSKRYIKLK 591
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 542 SFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNE 601
+ E S EL +++FL IVL+I+N LTY NP ++Y++LH++E F F + +
Sbjct: 672 NLKELQSEELTTHSEFLYIVLQIINNTLTYRAYSNPHLIYSLLHQQEYFPVFLNEENLSS 731
Query: 602 LLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSII 636
L NI +L +F+S L ++G E ++I+
Sbjct: 732 LSNNILNILSYFSSEL-KHAINGLSQQETTAETIM 765
>sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1
Length = 788
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 262 LPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSST 321
+P+N+L+ S+ PL + + VL+V + + ++ + +A D+
Sbjct: 266 IPYNHLLFSD---YREPLVEEAAQVLIVTLDHDSATSTSPTVDGTTTGTAMDDADPPGPE 322
Query: 322 HFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLADETA------ 375
+ VN Y + + D +F L+G + RL L T YL + T
Sbjct: 323 NLFVN-YLSRIHREEDFQF---ILKG------IARLLSNPLLQT---YLPNSTKKIQFHQ 369
Query: 376 --VLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLIL 431
++L + L N FL +VL +D+ +L+PIL L +A + +++ + ILL+L
Sbjct: 370 ELLVLFWKLCDFNKKFLFFVLKSSDVLDILVPILYFLNDARADQSRVGLMHIGVFILLLL 429
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
S + +F ++K VP + + + LL+++ + + +L+ ++ CL
Sbjct: 430 SGERNFGVRLNKPYSVRVP--MDIPVFTGTHADLLIVVFHKIITSGHQRLQPLF---DCL 484
Query: 492 ATLA-NMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAE 550
T+ N++P++ LS + +L+ L S + F S
Sbjct: 485 LTIVVNVSPYLKSLSMVTANKLLHLLEAFSTTW-------------------FLFSASQN 525
Query: 551 LHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHP 597
H+ + +LE+ N I+ Y N +VYAI+ + VF + P
Sbjct: 526 HHL----VFFLLEVFNNIIQYQFDGNSNLVYAIIRKRAVFHQLANLP 568
>sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1
Length = 788
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 149/347 (42%), Gaps = 55/347 (15%)
Query: 262 LPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSST 321
+P+N+L+ S+ PL + + VL+V + + ++ + +A D+
Sbjct: 266 IPYNHLLFSD---YREPLVEEAAQVLIVTLDHDSASSASPTVDGTTTGTAMDDADPPGPE 322
Query: 322 HFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLADETA------ 375
+ VN Y + + D +F L+G + RL L T YL + T
Sbjct: 323 NLFVN-YLSRIHREEDFQF---ILKG------IARLLSNPLLQT---YLPNSTKKIQFHQ 369
Query: 376 --VLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLIL 431
++L + L N FL +VL +D+ +L+PIL L +A + +++ + ILL+L
Sbjct: 370 ELLVLFWKLCDFNKKFLFFVLKSSDVLDILVPILFFLNDARADQSRVGLMHIGVFILLLL 429
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
S + +F ++K VP + + + LL+++ + + +L+ ++ CL
Sbjct: 430 SGERNFGVRLNKPYSIRVP--MDIPVFTGTHADLLIVVFHKIITSGHQRLQPLF---DCL 484
Query: 492 ATLA-NMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAE 550
T+ N++P++ LS + +L+ L S + + +A+
Sbjct: 485 LTIVVNVSPYLKSLSMVTANKLLHLLEAFSTTWFLFS--------------------AAQ 524
Query: 551 LHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHP 597
H FL LE+ N I+ Y N +VYAI+ + +F + P
Sbjct: 525 NHHLVFFL---LEVFNNIIQYQFDGNSNLVYAIIRKRSIFHQLANLP 568
>sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1
Length = 905
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 386 NSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLILSQDSSFNASIHK 443
N FL ++ + L+P+L+ + S+ T + + ILL+LS + F+ S++K
Sbjct: 472 NHDFLRSIVNYENSPEFLIPLLQYMDEGRKSQTTHGIVQIGTFILLLLSGERDFSISLNK 531
Query: 444 MILPSVPWYKEHL-LHQTSLGSLLVI-ILIRTVKYNLSKLRDVYLHTTCLATLANMAPHV 501
+ + H+ + Q + S VI ++ R + +L +Y L L+N++P++
Sbjct: 532 PFVGRI-----HIDIQQPQVYSDFVITVMYRLLVDTPDRLESIY--ECVLTILSNLSPYM 584
Query: 502 HRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELHIYTDFLRIV 561
LS +L+ LF LS T + FA + H Y ++ +
Sbjct: 585 KNLSMVTCVKLMKLFEYLS-----------------TPRFLFATN-----HNYR-YVGFL 621
Query: 562 LEILNAILTYALPRNPEVVYAILHREEVF 590
LE LN +L + N ++YAIL + F
Sbjct: 622 LESLNNLLQHQYESNTRLIYAILRCQNQF 650
>sp|Q17X31|LGT_HELAH Prolipoprotein diacylglyceryl transferase OS=Helicobacter
acinonychis (strain Sheeba) GN=lgt PE=3 SV=1
Length = 283
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 493 TLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELH 552
+L ++ H + L AYA +++ FYM R K D K+ + +D + + AEL
Sbjct: 17 SLGSIEVHWYGL-AYACAIVIA-FYMALRMIQK-----DPKRFPVARKDFESYFLWAELG 69
Query: 553 IYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRF 599
I +L A + Y L P Y + H ++F PF SH F
Sbjct: 70 I----------VLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNF 106
>sp|Q1CSR6|LGT_HELPH Prolipoprotein diacylglyceryl transferase OS=Helicobacter pylori
(strain HPAG1) GN=lgt PE=3 SV=1
Length = 279
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 493 TLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELH 552
+L ++ H + L AYA +V+ FYM R K D K+ + ++ + + AEL
Sbjct: 17 SLGSIEVHWYGL-AYACA-IVTAFYMALRMIQK-----DPKRFPIERKEFESYFLWAELG 69
Query: 553 IYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRF 599
I +L A + Y L P Y + H ++F PF SH F
Sbjct: 70 I----------VLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNF 106
>sp|A2AKX3|SETX_MOUSE Probable helicase senataxin OS=Mus musculus GN=Setx PE=2 SV=1
Length = 2646
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 82 WCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSL--DESEPLPK 139
+CL+ C S +S MKA V +K + E ENF++ ++ L +E EPLP
Sbjct: 634 YCLENC---SPVSSKEPMKA----DTHRVLMK--VNTTEEENFKQHYIDLNEEEQEPLPA 684
Query: 140 EFVLDQNIENLVMHSVLSFIAL 161
E L Q E L S + +
Sbjct: 685 ELCLKQKSEALFSESAQEQVKI 706
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 240,061,802
Number of Sequences: 539616
Number of extensions: 9674581
Number of successful extensions: 21480
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 21439
Number of HSP's gapped (non-prelim): 23
length of query: 691
length of database: 191,569,459
effective HSP length: 124
effective length of query: 567
effective length of database: 124,657,075
effective search space: 70680561525
effective search space used: 70680561525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)