Query 005577
Match_columns 690
No_of_seqs 323 out of 2992
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 18:36:54 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005577.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2084-2087//hhsearch_pdb/005577hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 416.8 23.0 248 25-292 24-277 (350)
2 4fie_A Serine/threonine-protei 1.0 1 1 408.4 24.9 246 24-292 150-401 (423)
3 4fih_A Serine/threonine-protei 1.0 1 1 404.9 22.7 245 25-292 74-324 (346)
4 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 395.7 22.2 244 25-290 32-283 (311)
5 4aoj_A High affinity nerve gro 1.0 1 1 395.5 29.1 261 20-297 36-318 (329)
6 4g3f_A NF-kappa-beta-inducing 1.0 1 1 395.4 21.8 255 22-298 55-316 (336)
7 4asz_A BDNF/NT-3 growth factor 1.0 1 1 393.4 26.9 259 21-296 9-287 (299)
8 4b99_A Mitogen-activated prote 1.0 1 1 391.6 25.4 256 24-292 53-345 (398)
9 3omv_A RAF proto-oncogene seri 1.0 1 1 391.3 26.5 261 16-296 27-298 (307)
10 4ase_A Vascular endothelial gr 1.0 1 1 390.2 26.2 266 18-298 57-347 (353)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=416.78 Aligned_cols=248 Identities=29% Similarity=0.512 Sum_probs=212.9
Q ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCE
Q ss_conf 22999998500595699999983568908999995128--9888999999999999610899900888898762488760
Q 005577 25 LKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICN--DEESLESAMKEISVMKSLKGHPNVVTLYAHTILDLGRTKE 102 (690)
Q Consensus 25 ~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~--~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~~~~~~~ 102 (690)
.+|++.+.||+|+||.||+|++. ..++.||||++... +....+.+.+|+.+|+.|. |||||++|+++. +.+.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~----~~~~ 97 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFE----ENGS 97 (350)
T ss_dssp CCEEEEEEC------CEEEEEET-TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEE----ETTE
T ss_pred CCEEEEEEEECCCCEEEEEEEEC-CCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEE----ECCE
T ss_conf 25588479702779399999988-99989999998658789799999999999998779-989891999999----8999
Q ss_pred EEEEEECCC-CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf 899995379-8589999971899999999999999999999999829999003799988289679998135315887765
Q 005577 103 ALLVMECCD-KSLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTN 181 (690)
Q Consensus 103 ~~LVmEy~~-gsLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL~DFGlA~~~ 181 (690)
+|||||||+ |+|.+++..+....+++..++.|+.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+.+
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCCCHHHEEECCCCCEEECCCCCCEEE
T ss_conf 999994889983999999738999978999999999999999999899--151359789979878999897646521440
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC---CC
Q ss_conf 531013331154334455679986348641111210799931469999999999973799999930999972467---78
Q 005577 182 HKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKLQILNGNY---RI 258 (690)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~~il~~~~---~~ 258 (690)
....... ...+||+.|||||+ +.+..|+.++|||||||+||||++|+.||.+.+..+++.... ..
T Consensus 176 ~~~~~~~---------~~~~GT~~YmAPE~---l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~ 243 (350)
T 4b9d_A 176 NSTVELA---------RACIGTPYYLSPEI---CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP 243 (350)
T ss_dssp CHHHHHH---------HHHHSCCTTCCHHH---HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred CCCCCCC---------CCCCCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 6885410---------14578836039999---87999895999999999999999787998996999999999808999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 9999999899999999842099999998999999
Q 005577 259 PESPKYSSSVTDLIRDMLQASPDDRPDITQVWFR 292 (690)
Q Consensus 259 ~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~ 292 (690)
+.+..+++.+.+||.+||++||.+||++.+++.+
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 9975579999999999855896679089999639
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=408.41 Aligned_cols=246 Identities=26% Similarity=0.382 Sum_probs=208.4
Q ss_pred CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEE
Q ss_conf 82299999850059569999998356890899999512898889999999999996108999008888987624887608
Q 005577 24 NLKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICNDEESLESAMKEISVMKSLKGHPNVVTLYAHTILDLGRTKEA 103 (690)
Q Consensus 24 ~~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~~~~~~~~ 103 (690)
..+|++.+.||+|+||.||+|++. .+++.||||++........+.+.+|+.+|+.|. |||||++|+++.. .+.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~----~~~~ 223 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLV----GDEL 223 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC-CTTBCCEEEEEEE----TTEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEEC-CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEEE----CCEE
T ss_conf 684386169624818489999999-999899999986255468999999999998579-9898716899998----9999
Q ss_pred EEEEECCCC-CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCC
Q ss_conf 999953798-5899999718999999999999999999999998299990037999882896799981353158877655
Q 005577 104 LLVMECCDK-SLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNH 182 (690)
Q Consensus 104 ~LVmEy~~g-sLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL~DFGlA~~~~ 182 (690)
|||||||+| +|.+++ ..+. |++.++..|+.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+.+.
T Consensus 224 ~iVmEy~~gG~L~~~i-~~~~--l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 224 WVVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEEEECCTTEEHHHHH-HHSC--CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHH-HCCC--CCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEECCCCCEEEECCCCCEECC
T ss_conf 9999698998289887-6169--899999999999999999999889--0446578777898589998980372654777
Q ss_pred CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC-----CC
Q ss_conf 3101333115433445567998634864111121079993146999999999997379999993099997246-----77
Q 005577 183 KRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKLQILNGN-----YR 257 (690)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~~il~~~-----~~ 257 (690)
... ......+||+.|||||+ +.+..|+.++|||||||++|||++|+.||.+....+++... ..
T Consensus 299 ~~~---------~~~~~~~GTp~YmAPEv---l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~ 366 (423)
T 4fie_A 299 KEV---------PRRKSLVGTPYWMAPEL---ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 366 (423)
T ss_dssp SSC---------CCBCCCEECTTTCCHHH---HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred CCC---------CCCCCCCCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 887---------64346664747279999---779999968999999999999997879989869999999997279988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 89999999899999999842099999998999999
Q 005577 258 IPESPKYSSSVTDLIRDMLQASPDDRPDITQVWFR 292 (690)
Q Consensus 258 ~~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~ 292 (690)
......+++.+.+||.+||.+||.+||++.+++.+
T Consensus 367 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 76501299999999999867895689099999609
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=404.93 Aligned_cols=245 Identities=26% Similarity=0.383 Sum_probs=206.7
Q ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEE
Q ss_conf 22999998500595699999983568908999995128988899999999999961089990088889876248876089
Q 005577 25 LKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICNDEESLESAMKEISVMKSLKGHPNVVTLYAHTILDLGRTKEAL 104 (690)
Q Consensus 25 ~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~~~~~~~~~ 104 (690)
.+|++.++||+|+||.||+|++. .+++.||||++........+.+.+|+.+|+.|. |||||++|+++.. .+.+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~----~~~~~ 147 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLV----GDELW 147 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC-CTTBCCEEEEEEE----TTEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEEC-CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEEE----CCEEE
T ss_conf 75387079602728299999998-999899999985276568999999999998679-9899919999998----99999
Q ss_pred EEEECCCC-CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCC
Q ss_conf 99953798-58999997189999999999999999999999982999900379998828967999813531588776553
Q 005577 105 LVMECCDK-SLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHK 183 (690)
Q Consensus 105 LVmEy~~g-sLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL~DFGlA~~~~~ 183 (690)
||||||+| +|.+++ .++. |++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++.+..
T Consensus 148 ivmEy~~gg~L~~~l-~~~~--l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 148 VVMEFLEGGALTDIV-THTR--MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp EEECCCTTEEHHHHH-HHSC--CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHH-HCCC--CCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCCCCEEEECCCCCEECCC
T ss_conf 999698998089998-7189--899999999999999999999888--35562788997887999889902757536678
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC-----CCC
Q ss_conf 101333115433445567998634864111121079993146999999999997379999993099997246-----778
Q 005577 184 RFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKLQILNGN-----YRI 258 (690)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~~il~~~-----~~~ 258 (690)
.. ....+.+||+.|||||+ +.+..|+.++|||||||++|||++|+.||.+.+..+++... ...
T Consensus 223 ~~---------~~~~~~~GTp~YmAPEv---l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~ 290 (346)
T 4fih_A 223 EV---------PRRKSLVGTPYWMAPEL---ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL 290 (346)
T ss_dssp SS---------CCBCCCCSCGGGCCHHH---HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC
T ss_pred CC---------CCCCCCCCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 87---------75346562758279999---7799999689999999999999978799898599999999971799988
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 9999999899999999842099999998999999
Q 005577 259 PESPKYSSSVTDLIRDMLQASPDDRPDITQVWFR 292 (690)
Q Consensus 259 ~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~ 292 (690)
+....+++.+.+||.+||.+||.+||++.+++.+
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 7502299999999999867995689099999609
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=395.70 Aligned_cols=244 Identities=24% Similarity=0.395 Sum_probs=207.9
Q ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECC---CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC
Q ss_conf 22999998500595699999983568908999995128---988899999999999961089990088889876248876
Q 005577 25 LKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICN---DEESLESAMKEISVMKSLKGHPNVVTLYAHTILDLGRTK 101 (690)
Q Consensus 25 ~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~---~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~~~~~~ 101 (690)
.+|++.++||+|+||.||+|++. .+++.||+|++... +....+.+.+|+.+|+.|. |||||++|+++. +.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~-~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~----~~~ 105 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQ----DDE 105 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEE----CSS
T ss_pred CCCEEEEEEECCCCEEEEEEEEC-CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCC-CCCCCEEEEEEE----ECC
T ss_conf 23689889831648499999999-999899999988888779789999999999998679-989891999997----389
Q ss_pred EEEEEEECCC-CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 0899995379-858999997189999999999999999999999982999900379998828967999813531588776
Q 005577 102 EALLVMECCD-KSLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTST 180 (690)
Q Consensus 102 ~~~LVmEy~~-gsLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL~DFGlA~~ 180 (690)
.+|||||||. |+|.+++...+. |++..+..|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+|+.
T Consensus 106 ~~yivmEy~~gG~L~~~i~~~~~--l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~ 181 (311)
T 4aw0_A 106 KLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKV 181 (311)
T ss_dssp EEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEECCCCCCHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf 89999964899899999987499--999999999999999999999887--82687878996985898889987687502
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH----HCCC
Q ss_conf 553101333115433445567998634864111121079993146999999999997379999993099997----2467
Q 005577 181 NHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKLQIL----NGNY 256 (690)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~~il----~~~~ 256 (690)
+.... ......+.+||+.|||||+ +.+..|+.++|||||||++|+|++|+.||.+.+..+++ ...+
T Consensus 182 ~~~~~-------~~~~~~~~~GTp~YmAPEv---l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~ 251 (311)
T 4aw0_A 182 LSPES-------KQARANSFVGTAQYVSPEL---LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY 251 (311)
T ss_dssp CCTTT-------TCCCBCCCCSCGGGCCHHH---HHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred CCCCC-------CCCCCCCCCCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 57787-------7654367556803079989---7689999689899899999999749899899799999999971999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 7899999998999999998420999999989999
Q 005577 257 RIPESPKYSSSVTDLIRDMLQASPDDRPDITQVW 290 (690)
Q Consensus 257 ~~~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil 290 (690)
.+ +..+++.+.+||.+||.+||.+||++.|++
T Consensus 252 ~~--p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 DF--PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CC--CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CC--CCCCCHHHHHHHHHHCCCCHHHCCCHHHHC
T ss_conf 99--965699999999997628975780967975
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=395.54 Aligned_cols=261 Identities=20% Similarity=0.282 Sum_probs=219.2
Q ss_pred EEECCCEEEEEEEEEECCCEEEEEEEECC----CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
Q ss_conf 75328229999985005956999999835----68908999995128988899999999999961089990088889876
Q 005577 20 IDVGNLKIHVRNVIAEGGFSCVYSARDAI----HMSKQYAMKHMICNDEESLESAMKEISVMKSLKGHPNVVTLYAHTIL 95 (690)
Q Consensus 20 i~i~~~ry~i~~~LG~GgfG~Vyla~d~~----~~~k~vAIK~i~~~~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~ 95 (690)
..+...+|.+.++||+|+||.||+|++.. ..+..||||++...+....+.|.+|+.+|++|+ |||||++|++|.
T Consensus 36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~- 113 (329)
T 4aoj_A 36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCT- 113 (329)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-
T ss_pred CCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEE-
T ss_conf 306789928877971477848998998786657789699999977579799999999999998589-989996989999-
Q ss_pred ECCCCCEEEEEEECCC-CCHHHHHHHHC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 2488760899995379-85899999718-------------999999999999999999999998299990037999882
Q 005577 96 DLGRTKEALLVMECCD-KSLVNVLENRG-------------AGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAEN 161 (690)
Q Consensus 96 ~~~~~~~~~LVmEy~~-gsLl~~L~~~~-------------~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~N 161 (690)
+...+|||||||+ |+|.+++.... .+.|++.+++.|+.||+.||.|||.++ ||||||||+|
T Consensus 114 ---~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~N 188 (329)
T 4aoj_A 114 ---EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRN 188 (329)
T ss_dssp ---SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGG
T ss_pred ---ECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC--EECCCCCHHH
T ss_conf ---89989999982799939999986075410012211245788999999999999999999984088--4226666764
Q ss_pred EEECCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH-CC
Q ss_conf 89679998135315887765531013331154334455679986348641111210799931469999999999973-79
Q 005577 162 LLLGSDGLWKLCDFGSTSTNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICY-FK 240 (690)
Q Consensus 162 ILLd~~g~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLlt-Gk 240 (690)
|||+.++.+||+|||+++....... .......+||+.|||||+ +.+..|+.++|||||||+||||+| |+
T Consensus 189 ILl~~~~~~Ki~DFGla~~~~~~~~-------~~~~~~~~gt~~ymAPE~---~~~~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 189 CLVGQGLVVKIGDFGMSRDIYSTDY-------YRVGGRTMLPIRWMPPES---ILYRKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp EEEETTTEEEECCCC-----------------------CCCCGGGCCHHH---HTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EEECCCCCEEECCCCCCEECCCCCC-------CEECCCCCCCCCCCCHHH---HCCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 8988999689766603336567875-------300476455656658265---447999966300105789999982899
Q ss_pred CCCCCCHHHHHH---HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf 999993099997---246778999999989999999984209999999899999995316
Q 005577 241 NAFDGESKLQIL---NGNYRIPESPKYSSSVTDLIRDMLQASPDDRPDITQVWFRVNEQL 297 (690)
Q Consensus 241 ~Pf~~~~~~~il---~~~~~~~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~l~~~l 297 (690)
.||.+.+..+++ ....+.+.+..+++.+.+||.+||+.||++||++.+++.++..+.
T Consensus 259 ~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 259 QPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp CTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 999998999999999808989986446399999999974759657929999999999874
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=395.43 Aligned_cols=255 Identities=22% Similarity=0.286 Sum_probs=208.9
Q ss_pred ECCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC
Q ss_conf 32822999998500595699999983568908999995128988899999999999961089990088889876248876
Q 005577 22 VGNLKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICNDEESLESAMKEISVMKSLKGHPNVVTLYAHTILDLGRTK 101 (690)
Q Consensus 22 i~~~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~~~~~~ 101 (690)
.....|++.++||+|+||.||+|++. .+++.||||++.... ...+|+.+|+.|+ |||||++|+++. +.+
T Consensus 55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~-~~g~~vAiK~i~~~~-----~~~~E~~il~~l~-HpnIV~l~~~~~----~~~ 123 (336)
T 4g3f_A 55 EEVHWMTHQPRVGRGSFGEVHRMKDK-QTGFQCAVKKVRLEV-----FRVEELVACAGLS-SPRIVPLYGAVR----EGP 123 (336)
T ss_dssp BTTTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTT-----CCTHHHHTTTTCC-CTTBCCEEEEEE----ETT
T ss_pred CCHHHEEECCEECCCCCEEEEEEEEC-CCCCEEEEEEECHHH-----HHHHHHHHHHHCC-CCCCCCEEEEEE----ECC
T ss_conf 25335176868513878099999988-999899999978888-----6999999998579-989993999999----899
Q ss_pred EEEEEEECCC-CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC-CEEEECCCCCC
Q ss_conf 0899995379-858999997189999999999999999999999982999900379998828967999-81353158877
Q 005577 102 EALLVMECCD-KSLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDG-LWKLCDFGSTS 179 (690)
Q Consensus 102 ~~~LVmEy~~-gsLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g-~vKL~DFGlA~ 179 (690)
.+|||||||+ |+|.+++...+. |++..++.|+.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+|+
T Consensus 124 ~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 124 WVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred EEEEEEECCCCCCHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCHHHEEEECCCCEEEEEECCCCE
T ss_conf 99999966599869999987699--999999999999999999999889--04261677887995899979996278776
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH----HHHHHCC
Q ss_conf 655310133311543344556799863486411112107999314699999999999737999999309----9997246
Q 005577 180 TNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESK----LQILNGN 255 (690)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~----~~il~~~ 255 (690)
.+........ .......+||+.|||||+ +.+..|+.++|||||||++|||++|+.||.+... ..+....
T Consensus 200 ~~~~~~~~~~----~~~~~~~~GT~~YmAPE~---~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~ 272 (336)
T 4g3f_A 200 CLQPDGLGKS----LLTGDYIPGTETHMAPEV---VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP 272 (336)
T ss_dssp EC----------------CCCCCCGGGCCHHH---HTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC
T ss_pred ECCCCCCCCC----EECCCCCCCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
T ss_conf 8567876540----221785455802008999---889998908999999999999997869989989999999998089
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
Q ss_conf 778-9999999899999999842099999998999999953167
Q 005577 256 YRI-PESPKYSSSVTDLIRDMLQASPDDRPDITQVWFRVNEQLP 298 (690)
Q Consensus 256 ~~~-~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~l~~~l~ 298 (690)
... ..++.+++.+.+||.+||++||.+||++.|++.++...+.
T Consensus 273 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 273 PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 98002586679999999999762897689599999999999975
No 7
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=393.41 Aligned_cols=259 Identities=20% Similarity=0.294 Sum_probs=216.6
Q ss_pred EECCCEEEEEEEEEECCCEEEEEEEECC----CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf 5328229999985005956999999835----689089999951289888999999999999610899900888898762
Q 005577 21 DVGNLKIHVRNVIAEGGFSCVYSARDAI----HMSKQYAMKHMICNDEESLESAMKEISVMKSLKGHPNVVTLYAHTILD 96 (690)
Q Consensus 21 ~i~~~ry~i~~~LG~GgfG~Vyla~d~~----~~~k~vAIK~i~~~~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~ 96 (690)
.|...+|.+.+.||+|+||.||+|++.. ..+..||||++........+.|.+|+.+|++|+ |||||++|++|.
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~-- 85 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVKFYGVCV-- 85 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC--
T ss_pred CCCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEE--
T ss_conf 14888929824982078829999998776667788799999967778589999999999998589-988862879995--
Q ss_pred CCCCCEEEEEEECCC-CCHHHHHHHHC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
Q ss_conf 488760899995379-85899999718-----------999999999999999999999998299990037999882896
Q 005577 97 LGRTKEALLVMECCD-KSLVNVLENRG-----------AGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLL 164 (690)
Q Consensus 97 ~~~~~~~~LVmEy~~-gsLl~~L~~~~-----------~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILL 164 (690)
+.+.+|||||||+ |+|.+++...+ ...|++.+++.|+.||+.||.|||+++ ||||||||+||||
T Consensus 86 --~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl 161 (299)
T 4asz_A 86 --EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLV 161 (299)
T ss_dssp --SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred --ECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEE
T ss_conf --699899999858999689999860864211123577788999999999999999999997599--0467657763898
Q ss_pred CCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH-CCCCC
Q ss_conf 79998135315887765531013331154334455679986348641111210799931469999999999973-79999
Q 005577 165 GSDGLWKLCDFGSTSTNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICY-FKNAF 243 (690)
Q Consensus 165 d~~g~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLlt-Gk~Pf 243 (690)
+.++.+||+|||+++...... .........||+.|||||+ +.+..|+.++|||||||+||||+| |+.||
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~-------~~~~~~~~~gt~~ymAPE~---~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf 231 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTD-------YYRVGGHTMLPIRWMPPES---IMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGG-------CEEETTTEEECGGGCCHHH---HHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCCEEECCCCCCEECCCCC-------CEEECCCEECCHHHCCHHH---HCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 799868988730010067887-------4166475134701038898---707999703667788999999980899999
Q ss_pred CCCHHHHHHH---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 9930999972---4677899999998999999998420999999989999999531
Q 005577 244 DGESKLQILN---GNYRIPESPKYSSSVTDLIRDMLQASPDDRPDITQVWFRVNEQ 296 (690)
Q Consensus 244 ~~~~~~~il~---~~~~~~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~l~~~ 296 (690)
.+.+..+++. .....+.+..+++.+.+||.+||+.||++||++.++...+...
T Consensus 232 ~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 232 YQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp TTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
T ss_conf 99899999999980898899741439999999997687966892999999999877
No 8
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=391.58 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=209.6
Q ss_pred CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE--CCC
Q ss_conf 822999998500595699999983568908999995128--9888999999999999610899900888898762--488
Q 005577 24 NLKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICN--DEESLESAMKEISVMKSLKGHPNVVTLYAHTILD--LGR 99 (690)
Q Consensus 24 ~~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~--~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~~~~--~~~ 99 (690)
+.+|++.+.||+|+||.||+|++. .+++.||||++... .....+++++|+.+|+.|. |||||++++++... +.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~-~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~ 130 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGE 130 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC-CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCCCC
T ss_conf 897489889842608499999998-99989999998740034688999999999998667-9995417655520355466
Q ss_pred CCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 76089999537985899999718999999999999999999999998299990037999882896799981353158877
Q 005577 100 TKEALLVMECCDKSLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTS 179 (690)
Q Consensus 100 ~~~~~LVmEy~~gsLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL~DFGlA~ 179 (690)
.+.+|||||||+|+|.+.+...+ .|++..+..|+.||+.||.|||++| ||||||||+|||++.++.+||+|||+|+
T Consensus 131 ~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 131 FKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CCEEEEEEECCCCCHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCEEEEECCEEE
T ss_conf 88799998379998899998659--9999999999999999999999886--7678737133542788877872214342
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC---
Q ss_conf 65531013331154334455679986348641111210799931469999999999973799999930999972467---
Q 005577 180 TNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKLQILNGNY--- 256 (690)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~~il~~~~--- 256 (690)
.+...... ......+.+||+.|||||++ .....++.++||||+||++|||++|+.||.+.+..+.+....
T Consensus 207 ~~~~~~~~-----~~~~~~~~~GT~~Y~APEv~--~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 207 GLCTSPAE-----HQYFMTEYVATRWYRAPELM--LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279 (398)
T ss_dssp CC------------CCCCCSSCCCCTTCCHHHH--TTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH
T ss_pred ECCCCCCC-----CCCCCCCCEECHHHCCHHHH--CCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 13467545-----66665662558676487876--278889972221116899999997889989889899999999703
Q ss_pred -C--------------------CCC---------CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf -7--------------------899---------99999899999999842099999998999999
Q 005577 257 -R--------------------IPE---------SPKYSSSVTDLIRDMLQASPDDRPDITQVWFR 292 (690)
Q Consensus 257 -~--------------------~~~---------~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~ 292 (690)
. .+. .+.+++.+.+||.+||..||.+||++.+++.+
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 899867763310023455553078768878898587999999999999774995579189999659
No 9
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=391.34 Aligned_cols=261 Identities=18% Similarity=0.304 Sum_probs=210.8
Q ss_pred CCCEEEECCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 99637532822999998500595699999983568908999995128--9888999999999999610899900888898
Q 005577 16 EGRSIDVGNLKIHVRNVIAEGGFSCVYSARDAIHMSKQYAMKHMICN--DEESLESAMKEISVMKSLKGHPNVVTLYAHT 93 (690)
Q Consensus 16 ~g~~i~i~~~ry~i~~~LG~GgfG~Vyla~d~~~~~k~vAIK~i~~~--~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~~ 93 (690)
....|+|...+|++.++||+|+||+||+|++. ..||||++... +.+..+.|.+|+.+|++|+ |||||++++++
T Consensus 27 ~~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~ 101 (307)
T 3omv_A 27 SSYYWEIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR-HVNILLFMGYM 101 (307)
T ss_dssp --CCCBCCTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred CCCCCEECHHHEEEEEEEEECCCCEEEEEEEC----CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEE
T ss_conf 88670874799498449820888689999989----96899999726899999999999999998589-98874699999
Q ss_pred EEECCCCCEEEEEEECCC-CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEE
Q ss_conf 762488760899995379-8589999971899999999999999999999999829999003799988289679998135
Q 005577 94 ILDLGRTKEALLVMECCD-KSLVNVLENRGAGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDLKAENLLLGSDGLWKL 172 (690)
Q Consensus 94 ~~~~~~~~~~~LVmEy~~-gsLl~~L~~~~~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDLKP~NILLd~~g~vKL 172 (690)
. .+.+|||||||+ |+|.+++.... ..+++.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||
T Consensus 102 ~-----~~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 102 T-----KDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp C-----SSSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEE
T ss_pred E-----CCEEEEEEECCCCCCHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEECCCCCEEE
T ss_conf 7-----895899997489987889875248-99999999999999999999997799--527855789978889990899
Q ss_pred ECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH---
Q ss_conf 31588776553101333115433445567998634864111121079993146999999999997379999993099---
Q 005577 173 CDFGSTSTNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYFKNAFDGESKL--- 249 (690)
Q Consensus 173 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLltGk~Pf~~~~~~--- 249 (690)
+|||+|+....... .......+||+.|||||++.....+.|+.++|||||||+||||+||+.||.+....
T Consensus 174 ~DFGla~~~~~~~~-------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~ 246 (307)
T 3omv_A 174 GDFGLATVKSRWSG-------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246 (307)
T ss_dssp CCCSSCBC-------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred EECCCCEECCCCCC-------CEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 44157542466776-------40315644687724987861468998786877572899999999788998999969999
Q ss_pred -HHHHCCCCCC----CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf -9972467789----9999998999999998420999999989999999531
Q 005577 250 -QILNGNYRIP----ESPKYSSSVTDLIRDMLQASPDDRPDITQVWFRVNEQ 296 (690)
Q Consensus 250 -~il~~~~~~~----~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~l~~~ 296 (690)
.++...+..+ .+..++..+.+||.+||+.||++||++.+++..+..+
T Consensus 247 ~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp HHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
T ss_conf 9999658888872003544569999999997577976890989999999997
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=1.00 E-value=1 Score=390.19 Aligned_cols=266 Identities=19% Similarity=0.300 Sum_probs=219.2
Q ss_pred CEEEECCCEEEEEEEEEECCCEEEEEEEECC----CCCEEEEEEEEECC-CHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 6375328229999985005956999999835----68908999995128-988899999999999961089990088889
Q 005577 18 RSIDVGNLKIHVRNVIAEGGFSCVYSARDAI----HMSKQYAMKHMICN-DEESLESAMKEISVMKSLKGHPNVVTLYAH 92 (690)
Q Consensus 18 ~~i~i~~~ry~i~~~LG~GgfG~Vyla~d~~----~~~k~vAIK~i~~~-~~e~~e~~~~Ei~iL~~L~~HPNIVkl~~~ 92 (690)
..|+|...+|++.+.||+|+||.||+|.+.. ...+.||+|.+... .....+.+.+|+.+|.++..|||||+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCEECHHHEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 55170579959820982178959999998688854477599999976235868999999999999975799848778899
Q ss_pred EEEECCCCCEEEEEEECCC-CCHHHHHHHHC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8762488760899995379-85899999718--------------99999999999999999999999829999003799
Q 005577 93 TILDLGRTKEALLVMECCD-KSLVNVLENRG--------------AGYFEEKQVLAIFRDVCNAVFAMHSQSPPIAHRDL 157 (690)
Q Consensus 93 ~~~~~~~~~~~~LVmEy~~-gsLl~~L~~~~--------------~~~Lse~~v~~i~~qIl~aL~yLHs~g~~IVHRDL 157 (690)
|.. ....+|||||||+ |+|.++|.... ...+++..++.|+.||+.||.|||+++ ||||||
T Consensus 137 ~~~---~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDL 211 (353)
T 4ase_A 137 CTK---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDL 211 (353)
T ss_dssp ECC---TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCC
T ss_pred EEE---CCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCC
T ss_conf 994---697799999838989799999743566654333410110356899999999999999987676278--435746
Q ss_pred CCCCEEECCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98828967999813531588776553101333115433445567998634864111121079993146999999999997
Q 005577 158 KAENLLLGSDGLWKLCDFGSTSTNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRIC 237 (690)
Q Consensus 158 KP~NILLd~~g~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~s~ksDVwSLGviLyeLl 237 (690)
||+||||+.++.+||+|||+|+.+...... .......||+.|||||+ +.+..|+.++|||||||+||||+
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~-------~~~~~~~gt~~ymAPE~---l~~~~y~~ksDVwS~Gv~l~El~ 281 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDY-------VRKGDARLPLKWMAPET---IFDRVYTIQSDVWSFGVLLWEIF 281 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTS-------EEETTEEECGGGCCHHH---HHHCCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEECCCCCEEECCCHHHHHCCCCCCC-------EEECCCCCCCCCCCHHH---HHCCCCCCCCCEEEHHHHHHHHH
T ss_conf 721130579997897965432224568872-------03254014666569899---94699997553740689999998
Q ss_pred H-CCCCCCCCH----HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
Q ss_conf 3-799999930----999972467789999999899999999842099999998999999953167
Q 005577 238 Y-FKNAFDGES----KLQILNGNYRIPESPKYSSSVTDLIRDMLQASPDDRPDITQVWFRVNEQLP 298 (690)
Q Consensus 238 t-Gk~Pf~~~~----~~~il~~~~~~~~~~~~s~~l~~LI~~lL~~dP~~RPt~~eil~~l~~~l~ 298 (690)
| |+.||.+.. ....+....+.+.+..+++.+.++|.+||+.||.+||++.+++.++..++.
T Consensus 282 t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 282 SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp TTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 189999999898999999997389888886578999999999768696679399999999999998
Done!