Your job contains 1 sequence.
>005579
MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQASTSSQQEKTETTSSLLSSEVVFTPYVG
QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH
PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEAD
QERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK
RENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS
YRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTD
IDLGLRDSIARELPNTKHVVCIWHILSKLSSWFSSLLGSQYEEFKAEFDMLCRLESVEDF
EHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILS
EQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIVLST
QYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKN
YFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKERFSYVH
KELTGLLDHVRNMPETNEFVVNMPAHNASD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005579
(690 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 2456 4.1e-255 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 1350 6.5e-138 1
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 671 5.8e-66 1
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 598 3.2e-58 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 503 1.0e-56 3
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 472 7.8e-53 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 467 8.9e-52 2
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 431 1.3e-46 2
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 431 1.2e-45 2
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 399 1.4e-42 2
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 352 1.0e-36 2
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 385 1.1e-33 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 253 5.1e-25 2
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 164 1.1e-09 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 142 2.2e-07 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 126 1.7e-05 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 120 4.2e-05 1
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 2456 (869.6 bits), Expect = 4.1e-255, P = 4.1e-255
Identities = 463/682 (67%), Positives = 534/682 (78%)
Query: 1 MAMKPPTNIWIRRQQCPCGDWKCYIKYEGDDQAXXXXXXXXXXXXXXXXXXXVVFTPYVG 60
MA+KP NIWIRRQQCPCGDWKCYI+ E D+ VFTPYVG
Sbjct: 1 MALKPLNNIWIRRQQCPCGDWKCYIRLEEDESTITKSEIESTPTPTSQYDT--VFTPYVG 58
Query: 61 QIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEH 120
QIF +DDEAFEYYS FARK+GFSIRKARSTESQNLG+YRRDFVCYRSGFNQPRKKANVEH
Sbjct: 59 QIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEH 118
Query: 121 PRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEAD 180
PR+RKSVRCGCD KLYLTKE+VDGV+ WYVSQFSNVHNHELLEDDQVR+LPAYRKIQ++D
Sbjct: 119 PRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSD 178
Query: 181 QERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEK 240
QERILLLSKAGFPVNRIVK+LELEKGV GQLPFIEKDVRNFVR CKK+VQENDA +TEK
Sbjct: 179 QERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEK 238
Query: 241 RENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTS 300
RE+DTLELLE CK +AERD+DFVYD T+DEN+KVENIAW++GDS+R Y+LFGDVV FDTS
Sbjct: 239 RESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTS 298
Query: 301 YRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTD 360
YRS+ YGLLLGV+FG+DN+GKA+ GCVLLQDES SF WALQTFVRFMRGRHPQTILTD
Sbjct: 299 YRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTD 358
Query: 361 IDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLCRLESVEDF 420
ID GL+D+I RE+PNT HVV + HI YEEF+A FDMLCR +V++F
Sbjct: 359 IDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEF 418
Query: 421 EHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILS 480
E QW+ V RFGLV D+H ALL+S RA WL IR +F+A+ MT EF+ S+D+F K+++
Sbjct: 419 EQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVD 478
Query: 481 EQTCLQVFFE----QVCAAA-FGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQHE 535
TC+Q+ E QV AAA Y +KTCMP+E+HAR ILTPYAF VLQ+E
Sbjct: 479 GATCMQLLLEESALQVSAAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNE 538
Query: 536 IVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRV 595
+VLS QYA EM NG ++V HYKKM+GE VIW PE+E+I CSCKEFEHSGILCRH+LRV
Sbjct: 539 MVLSVQYAVAEMANGPFIVHHYKKMEGECCVIWNPENEEIQCSCKEFEHSGILCRHTLRV 598
Query: 596 LVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTESMISKER 655
L VKN F +PE+Y LLRWR E+ V E N Q D+ AQ FHSL LLTESMISK+R
Sbjct: 599 LTVKNCFHIPEQYFLLRWRQESPHVATENQNGQGIGDDSAQTFHSLTETLLTESMISKDR 658
Query: 656 FSYVHKELTGLLDHVRNMPETN 677
Y ++EL+ L+D VRN N
Sbjct: 659 LDYANQELSLLIDRVRNTAPAN 680
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 1350 (480.3 bits), Expect = 6.5e-138, P = 6.5e-138
Identities = 276/628 (43%), Positives = 398/628 (63%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG--IYRRDFVCYRSGFNQPRK 114
PY+GQIF + D A+E+YS FA++ GFSIR+ R+ +G + RR FVC+R+G N P K
Sbjct: 48 PYLGQIFLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAG-NTPIK 106
Query: 115 KANVEHP-RDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAY 173
+ P R+R+S RCGC A L ++K G T+W V+ F+N HNHELLE +QVR LPAY
Sbjct: 107 TLSEGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAY 166
Query: 174 RKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQEN 233
R I +AD+ RIL+ SK G V +++++LELEK V+PG LPF EKDVRN +++ KK E+
Sbjct: 167 RSISDADKSRILMFSKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRNLLQSFKKLDPED 226
Query: 234 DALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGD 293
EN ++ L C+++ E+D +F +++T D N+K+ENIAWS+ SI++Y LFGD
Sbjct: 227 --------EN--IDFLRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGD 276
Query: 294 VVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRH 353
V FDT++R + LG+W G++N+G FFGCVLL+DE+ S++WALQ F FM G+
Sbjct: 277 AVVFDTTHRLSAVEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKA 336
Query: 354 PQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLCR 413
PQTILTD ++ L+++IA E+P TKH +CIW + +Y ++KAEF L
Sbjct: 337 PQTILTDHNMCLKEAIAGEMPATKHALCIWMVVGKFPSWFNAGLGERYNDWKAEFYRLYH 396
Query: 414 LESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDT 473
LESVE+FE W V FGL +++H+ L++ R+ W Y+R +FLA M S++++
Sbjct: 397 LESVEEFELGWRDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINA 456
Query: 474 FFKKILSEQTCLQVFFEQVCAAA-FGNSTRE------GVQYVHIKTCMPIEEHARSILTP 526
F ++ LS QT L F EQV F + E +Q + +KT P+E HA S+LTP
Sbjct: 457 FIQRFLSAQTRLAHFVEQVAVVVDFKDQATEQQTMQQNLQNISLKTGAPMESHAASVLTP 516
Query: 527 YAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSG 586
+AF LQ ++VL+ YA+ +M G YLVRH+ K+DG V W+P++ I CSC+ FE SG
Sbjct: 517 FAFSKLQEQLVLAAHYASFQMDEG-YLVRHHTKLDGGRKVYWVPQEGIISCSCQLFEFSG 575
Query: 587 ILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLAAALL 646
LCRH+LRVL N FQ+P++YL LRWR ++ + + E Q +L + L+
Sbjct: 576 FLCRHALRVLSTGNCFQVPDRYLPLRWRRISTSFSKTFRSNAEDHGERVQLLQNLVSTLV 635
Query: 647 TESMISKERFSYVHKELTGLLDHVRNMP 674
+ES SKER ++ + LL +R P
Sbjct: 636 SESAKSKERLDIATEQTSILLSRIREQP 663
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 185/587 (31%), Positives = 284/587 (48%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGF---NQP 112
PY G F+S++ A +Y+++AR+ GFS R + S S+ G I +R FVC + GF N+
Sbjct: 73 PYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEK 132
Query: 113 RKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPA 172
R K E R R R GC A L + + D +W VS F HNHEL+ DQV L +
Sbjct: 133 RTKDR-EIKRPRTITRVGCKASLSVKMQ--DS-GKWLVSGFVKDHNHELVPPDQVHCLRS 188
Query: 173 YRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQE 232
+R+I + I L AG RI+ L E G ++ F E D RN++R ++ E
Sbjct: 189 HRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYG-GISKVGFTEVDCRNYMRNNRQKSIE 247
Query: 233 NDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFG 292
+ L LL+ + M + +F Y E++ V N+ W+ +I +T FG
Sbjct: 248 GEIQL----------LLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFG 297
Query: 293 DVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGR 352
D VTFDT+YRS Y L + G+++HG+ I FGC + +E+ SF W T++ M
Sbjct: 298 DTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAH 357
Query: 353 HPQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLC 412
P +I TD D +R +I P +H C WHI ++ F+++F
Sbjct: 358 PPVSITTDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVFL-KHPSFESDFHKCV 416
Query: 413 RL-ESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSV 471
L ESVEDFE W + ++ L + + ++S R W+ Y+R F A M S S+
Sbjct: 417 NLTESVEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSI 476
Query: 472 DTFFKKILSEQTCLQVFF---EQVCAAAFGNSTREGVQYVH----IKTCMPIEEHARSIL 524
+++F ++ T L FF E+ + + ++ +KT P+E+ A +
Sbjct: 477 NSYFDGYINASTNLSQFFKLYEKALESRLEKEVKADYDTMNSPPVLKTPSPMEKQASELY 536
Query: 525 TPYAFRVLQHEIVLSTQYATTEMTNGSYLVRHYKKMDGE----YLVIWIPEDEQIHCSCK 580
T F Q E+V + + ++ + LV + GE + V + + + +CSC+
Sbjct: 537 TRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQ 596
Query: 581 EFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRW-RLENSLVTMEGPN 626
FE SGI+CRH L V V N LP Y+L RW R S V + N
Sbjct: 597 MFEFSGIICRHILAVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYN 643
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 174/649 (26%), Positives = 311/649 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGF--SIRKARSTESQNLGIYRRDFVCYRSGFNQPRK 114
P G F + + A+ +Y +A+ GF SI+ +R ++ I + F C R G P
Sbjct: 51 PRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAK-FACSRYGVT-PES 108
Query: 115 KANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYR 174
+++ R + C A +++ K DG +W + +F HNHELL R
Sbjct: 109 ESSGSSSRRSTVKKTDCKASMHV-KRRPDG--KWIIHEFVKDHNHELLPALAYHFR-IQR 164
Query: 175 KIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRT-CKKTVQEN 233
++ A++ I +L V+ K + +E Q G K++ + ++T V +
Sbjct: 165 NVKLAEKNNIDILHA----VSERTKKMYVEMSRQSGGY----KNIGSLLQTDVSSQVDKG 216
Query: 234 DALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGD 293
L E E D+ LLE K + + + F Y +E++++ N+ W+ S Y F D
Sbjct: 217 RYLALE--EGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFND 274
Query: 294 VVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRH 353
VV+FDT+Y L L ++ G+++H + + GC L+ DES +F W ++T++R M GR
Sbjct: 275 VVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRA 334
Query: 354 PQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDM-LC 412
P+ ILTD D L +++ LPNT+H +WH+ ++E F +F+ +
Sbjct: 335 PKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVMK-RHENFLLKFNKCIF 393
Query: 413 RLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVD 472
R + ++F+ +W V++FGL +D+ + L +R W+ +++ FLA M T + S+SV+
Sbjct: 394 RSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVN 453
Query: 473 TFFKKILSEQTCLQVFFEQVCAAAFGNSTREGV---QYVH----IKTCMPIEEHARSILT 525
+FF K + ++ L+ F Q E V H +K+ P E+ + T
Sbjct: 454 SFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYT 513
Query: 526 PYAFRVLQHEI---VLSTQYATTEMTN-GSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKE 581
F+ Q E+ V E N ++ V+ +K D ++LV W ++ C C+
Sbjct: 514 HTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEK-DDDFLVTWSKTKSELCCFCRM 572
Query: 582 FEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLE--NSLVTMEGPNPQSSSDECAQAFH 639
FE+ G LCRH+L +L + + +P +Y+L RW + + ++ EG + + +
Sbjct: 573 FEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDAKSGVLAGEGADQIQTRVQRYNDLC 632
Query: 640 SLAAALLTESMISKERFSYVHKELTGLLDHVRNMPETNEFVVNMPAHNA 688
S A L E +S+E ++ L L++ ++N + N N+ N+
Sbjct: 633 SRATELSEEGCVSEENYNIA---LRTLVETLKNCVDMNNARNNITESNS 678
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 503 (182.1 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
Identities = 133/472 (28%), Positives = 226/472 (47%)
Query: 204 EKGVQ-PGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDF 262
++GV P + ++ D + R + + T R D LLE K M + F
Sbjct: 159 QEGVNVPSGMMYVSMDANS--RGARNASMATNTKRTIGR--DAHNLLEYFKRMQAENPGF 214
Query: 263 VYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKA 322
Y DE+ ++ N+ W+ S AYT FGD VT DT YR + + + G+++HG+A
Sbjct: 215 FYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQA 274
Query: 323 IFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCI 382
I FGC L+ DES SF W +TF+ MR + P +++TD D ++ + + P +H +
Sbjct: 275 ILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFPGARHCINK 334
Query: 383 WHIXXXXXXXXXXXXXXQYEEFKAE-FDMLCRLESVEDFEHQWNHFVARFGLVSDKHVAL 441
W + Y F+ E ++ + E++E+FE W+ + ++ L + +
Sbjct: 335 WDVLREGQEKLAHVCLA-YPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNS 393
Query: 442 LFSYRAFWLFSYIRGYFLARMMTVE-FSQSVDTFFKKILSEQTCLQVFF---EQVCAAAF 497
L++ RA W+ Y R F A + + +S S FF +++QT L +FF E+ + F
Sbjct: 394 LYNARAQWVPVYFRDSFFAAVFPSQGYSGS---FFDGYVNQQTTLPMFFRLYERAMESWF 450
Query: 498 GNSTREGVQYVH----IKTCMPIEEHARSILTPYAFRVLQHEIVLSTQYATTEM----TN 549
+ V+ +KT P+E A ++ T F Q E+V + + + T
Sbjct: 451 EMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTT 510
Query: 550 GSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYL 609
++ V +++ + Y+V + + + +CSC+ FEHSGILCRH L V V N LP Y+
Sbjct: 511 STFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILTLPPHYI 570
Query: 610 LLRW-RLENSLVTMEGPNPQSSSDECAQAFHSL---AAALLTESMISKERFS 657
L RW R S+V ++ ++ D ++ L A E I+ E ++
Sbjct: 571 LRRWTRNAKSMVELDEHVSENGHDSSIHRYNHLCREAIKYAEEGAITAEAYN 622
Score = 75 (31.5 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRK 114
P VG F S+ EA +Y ++R+ GF+ + T+ + R+FVC S R+
Sbjct: 49 PCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLPRTDGS---VSVREFVCSSSSKRSKRR 103
Score = 55 (24.4 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 122 RDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQ 181
R ++ + CDA + + + G +W V++F H H L + + L R +++
Sbjct: 99 RSKRRLSESCDAMVRIE---LQGHEKWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEK 155
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 472 (171.2 bits), Expect = 7.8e-53, Sum P(2) = 7.8e-53
Identities = 129/476 (27%), Positives = 219/476 (46%)
Query: 147 QWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKG 206
+WYV F HNH+LL + Q ++R + L K P+ K L
Sbjct: 81 KWYVYSFVKEHNHDLLPE-QAHYFRSHRNTELVKSNDSRLRRKKNTPLTDC-KHLSAYH- 137
Query: 207 VQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDY 266
L FI+ +RN ++ V + D LLE M E + F +
Sbjct: 138 ----DLDFIDGYMRNQHDKGRRLVLDT---------GDAEILLEFLMRMQEENPKFFFAV 184
Query: 267 TTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFG 326
E+ + N+ W I Y F DVV+F+TSY Y + L ++ G+++H + + G
Sbjct: 185 DFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLG 244
Query: 327 CVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHIX 386
C LL D++ +++ W +Q+++ M G+ P+ +LTD + ++ +IA LP T+H C+WH+
Sbjct: 245 CGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVL 304
Query: 387 XXXXXXXXXXXXXQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYR 446
Q K F + R S E+F+ +W + +F L + L+ R
Sbjct: 305 DQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEER 364
Query: 447 AFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQ---VCAAAFGNSTRE 503
FW +++RG A + S+SV++ F + + +T L+ F E + + +
Sbjct: 365 KFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLMLEDRYEEEAKA 424
Query: 504 GVQYVH----IKTCMPIEEHARSILTPYAFRVLQHEIV-LSTQYATTEMTNGS-YLVRHY 557
H +K+ P E+ + + FR Q E++ + + T E G+ Y V+ +
Sbjct: 425 DFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAAACHLTKESEEGTTYSVKDF 484
Query: 558 KKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRW 613
+ +YLV W I+CSC+ FE+ G LCRH++ VL + F +P Y+L RW
Sbjct: 485 DD-EQKYLVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPINYVLQRW 539
Score = 124 (48.7 bits), Expect = 7.8e-53, Sum P(2) = 7.8e-53
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 63 FKSDDEAFEYYSNFARKNGFSIRKARSTESQ-NLGIYRRDFVCYRSGFNQPRKKANVEHP 121
F++ ++A+ +Y ++A+ GF K S S+ + F C R G Q A +P
Sbjct: 3 FETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAI--NP 60
Query: 122 RDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAYRKIQEADQ 181
R S + GC A +++ K DG +WYV F HNH+LL + Q ++R +
Sbjct: 61 R--ASPKIGCKASMHV-KRRPDG--KWYVYSFVKEHNHDLLPE-QAHYFRSHRNTELVKS 114
Query: 182 ERILLLSKAGFPV 194
L K P+
Sbjct: 115 NDSRLRRKKNTPL 127
Score = 46 (21.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 613 WRLENSLVTMEGPNPQSSSDECAQAFHSLAAALLTES 649
W +++ LV M G P+ + A + AA+L E+
Sbjct: 258 WLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPET 294
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 467 (169.5 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 120/471 (25%), Positives = 226/471 (47%)
Query: 214 FIE-KDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENE 272
F E K V + K + ++ L E D LL+ M + +F Y +++
Sbjct: 205 FAEYKTVISLKSDSKSSFEKGRTLSVET--GDFKILLDFLSRMQSLNSNFFYAVDLGDDQ 262
Query: 273 KVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQD 332
+V+N+ W S Y F DVV+ DT+Y Y + L ++ G++ H + + GC L+ D
Sbjct: 263 RVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISD 322
Query: 333 ESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXX 392
ES +++W ++T++R + G+ P+ ++T++D+ + + PNT+H + +WH+
Sbjct: 323 ESAATYSWLMETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSEN 382
Query: 393 XXXXXXXQYEEFKAEFDMLCRLESV--EDFEHQWNHFVARFGLVSDKHVALLFSYRAFWL 450
Q++ F +F+ C +S EDF +W +ARFGL D+ + L+ R W
Sbjct: 383 LGQVVK-QHDNFMPKFEK-CIYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWA 440
Query: 451 FSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVF---FEQV----CAAAFGNSTRE 503
+Y+ LA M T + + S++ FF K + ++T +Q F ++ V C +
Sbjct: 441 PTYMTDVLLAGMSTSQRADSINAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEM 500
Query: 504 GVQYVHIKTCMPIEEHARSILTPYAFRVLQHEIV----LSTQYATTEMTNGSYLVRHYKK 559
+ +K+ P E+ + TP F+ Q E++ S + + T ++ V+ ++
Sbjct: 501 WNKQPAMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIACSPREENRDATCSTFRVQDFEN 560
Query: 560 MDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSL 619
+ +++V W ++ C C+ FE+ G LCRH+L VL + +P +Y+L RW +
Sbjct: 561 -NQDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDAKS 619
Query: 620 VTMEGPNPQSSSDECAQAFHSL---AAALLTESMISKERFSYVHKELTGLL 667
G PQ + ++ L A L E+ +S+E ++ + G +
Sbjct: 620 RHFSG-EPQQLQTRLLR-YNDLCERALKLNEEASLSQESYNIAFLAIEGAI 668
Score = 128 (50.1 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFS--IRKARSTESQNLGIYRRDFVCYRSG------ 108
P G F+S EA+ +Y ++R GF+ I+ +R +++ I + F C R G
Sbjct: 70 PLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAK-FACSRYGTKREYD 128
Query: 109 --FNQPRKKANVEHPRD----RKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELL 162
FN+PR + + + P + R + C A +++ K DG +W + F HNHELL
Sbjct: 129 KSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHV-KRRPDG--KWVIHSFVREHNHELL 185
Query: 163 E----DDQVRMLPAYRKIQEADQERILLL 187
+Q R + A Q A+ + ++ L
Sbjct: 186 PAQAVSEQTRKIYAAMAKQFAEYKTVISL 214
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 431 (156.8 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 123/452 (27%), Positives = 211/452 (46%)
Query: 183 RILLLSKAGFPVNRIVKVL--ELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDAL--LT 238
RI G+ V+R+ K +LE G + + I DV + + ++ ND ++
Sbjct: 256 RIKRQDSGGWIVDRLNKDHNHDLEPGKKNAGMKKITDDVTGGLDSVD-LIELNDLSNHIS 314
Query: 239 EKRENDTLE-----LLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGD 293
REN + LL+ ++ D+ F Y D N +I W+ S A + FGD
Sbjct: 315 STRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGD 374
Query: 294 VVTFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRH 353
V FDTSYR Y + + G ++H + + G L+ DES +F+W QT++R M GR
Sbjct: 375 AVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMSGRR 434
Query: 354 PQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDM-LC 412
P++++ D DL ++ ++A+ P T H W I EFK E++ L
Sbjct: 435 PRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLRSFP----NEFKYEYEKCLY 490
Query: 413 RLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVD 472
+ ++ +F+ W+ V ++GL + + ++ R W+ +Y+R F + + D
Sbjct: 491 QSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRASFFGG---IHVDGTFD 547
Query: 473 TFFKKILSEQTCLQVF---FEQVCAAAFGNSTREGVQYVHIK----TCMPIEEHARSILT 525
F+ L+ T L+ F +EQ +E +++ T P+EE R + T
Sbjct: 548 PFYGTSLNSLTSLREFISRYEQGLEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYT 607
Query: 526 PYAFRVLQHEIVLSTQYATTEM-TNGS---YLVRHYKKMDGEYLVIWIPEDEQIHCSCKE 581
FR+ Q E+ S Y + G+ +LVR + ++ V + + CSC+
Sbjct: 608 LTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEKHAVTFSASNLNASCSCQM 667
Query: 582 FEHSGILCRHSLRVLVVKNYFQLPEKYLLLRW 613
FE+ G+LCRH L+V + + +LP +Y+L RW
Sbjct: 668 FEYEGLLCRHILKVFNLLDIRELPSRYILHRW 699
Score = 123 (48.4 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 42/162 (25%), Positives = 72/162 (44%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKK 115
PYVG F + +EA +YY+++A + GF +R + S+ G + R FVC + GF
Sbjct: 28 PYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF------ 81
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL---LEDDQVRMLPA 172
+ + R GC A + + + +W + Q HNH+L +E+ Q P+
Sbjct: 82 --------QLNSRTGCPAFIRVQRR---DTGKWVLDQIQKEHNHDLGGHIEEAQTTPRPS 130
Query: 173 YRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPF 214
+ Q A L +S P ++V + + G + F
Sbjct: 131 VQ--QRAPAPTKLGISVPHRPKMKVVDEADKGRSCPSGVISF 170
Score = 113 (44.8 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKK 115
PY G F S +EA ++Y +A GF +R + S+ G I R FVC + GF
Sbjct: 190 PYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF------ 243
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL 161
+HP R GC A + + ++ G W V + + HNH+L
Sbjct: 244 ---QHPS-----RMGCGAYMRIKRQDSGG---WIVDRLNKDHNHDL 278
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 431 (156.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 106/379 (27%), Positives = 183/379 (48%)
Query: 248 LLEACKNMAERDVDFVYDYTTDENE-KVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITY 306
LL+ ++ D+ F Y D N +I W+ + A + FGD V FDTSYR +Y
Sbjct: 352 LLDYFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSY 411
Query: 307 GLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLR 366
+ G ++H + + GC ++ DES +F W QT++R M GR P++I+ D DL ++
Sbjct: 412 SVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQ 471
Query: 367 DSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDM-LCRLESVEDFEHQWN 425
++ + P H W I EFK E++ + + +++ +F+ W+
Sbjct: 472 QALVQVFPGAHHRYSAWQIREKERENLIPFPS----EFKYEYEKCIYQTQTIVEFDSVWS 527
Query: 426 HFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKILSEQTCL 485
+ ++GL D + ++ R W+ +Y+R F A + + +++ FF L T L
Sbjct: 528 ALINKYGLRDDVWLREIYEQRENWVPAYLRASFFAG---IPINGTIEPFFGASLDALTPL 584
Query: 486 QVF---FEQVCAAAFGNSTREGVQYVHIK----TCMPIEEHARSILTPYAFRVLQHEIVL 538
+ F +EQ +E +++ T P+EE R + T FR+ Q+E+V
Sbjct: 585 REFISRYEQALEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQNELVQ 644
Query: 539 STQYATTEM-TNGS---YLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSLR 594
S Y + G+ +LVR ++ V + + CSC+ FEH G+LCRH L+
Sbjct: 645 SYNYLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILK 704
Query: 595 VLVVKNYFQLPEKYLLLRW 613
V + + +LP +Y+L RW
Sbjct: 705 VFNLLDIRELPSRYILHRW 723
Score = 115 (45.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKK 115
PYVG F + +EA E+Y+ +A + GF +R + S+ G + R FVC + GF
Sbjct: 43 PYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF------ 96
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL 161
+ + R GC A + + + +W + Q HNHEL
Sbjct: 97 --------QLNSRTGCTAFIRVQRR---DTGKWVLDQIQKEHNHEL 131
Score = 114 (45.2 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKK 115
PY G F S +EA ++Y +A GF +R + S+ G I R FVC R GF
Sbjct: 211 PYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF------ 264
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL 161
+HP R GC A + + ++ G W V + + HNH+L
Sbjct: 265 ---QHPS-----RMGCGAYMRIKRQDSGG---WIVDRLNKDHNHDL 299
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 399 (145.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 105/416 (25%), Positives = 193/416 (46%)
Query: 242 ENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSY 301
E D LLE M ++ F Y D +++V N+ W + Y F DVV FDT Y
Sbjct: 167 EEDLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFY 226
Query: 302 RSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDI 361
Y + + G+ +H + + GC L+ + S +++W +T+++ + G+ P ++TD
Sbjct: 227 VRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQ 286
Query: 362 DLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLCRLESVED-- 419
D L D + P+ +H+ C+W + Q + F F C S D
Sbjct: 287 DKLLSDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVS-QDDGFMESFGN-CVASSWTDEH 344
Query: 420 FEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTFFKKIL 479
FE +W++ + +F L ++ V LLF R W+ Y G LA + E S S+ + F K +
Sbjct: 345 FERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKYM 404
Query: 480 SEQTCLQVFFE---QVCAAAFGNSTREGVQYVH----IKTCMPIEEHARSILTPYAFRVL 532
+ + + FFE + ++ ++Y +++ + E+ I T AF+
Sbjct: 405 NSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKF 464
Query: 533 QHEI--VLSTQYATT--EMTNGSYLVRHYKKMDGEYLVIWIPEDEQIH--CSCKEFEHSG 586
Q E+ V+S Q + T + + +++ ++ + +E + CSC FE+ G
Sbjct: 465 QAEVPGVVSCQLQKEREDGTTAIFRIEDFEERQNFFVAL---NNELLDACCSCHLFEYQG 521
Query: 587 ILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLVTMEGPNPQSSSDECAQAFHSLA 642
LC+H++ VL + ++P +Y+L RW + +G N + +D+CA + +A
Sbjct: 522 FLCKHAILVLQSADVSRVPSQYILKRW-------SKKGNNKEDKNDKCATIDNRMA 570
Score = 124 (48.7 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 60 GQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVE 119
G F+S + A+ +Y +AR GF I S S+ G + D S F R+KA
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFI-DVKIACSRFGTKREKATAI 99
Query: 120 HPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDD 165
+PR + GC A L++ ++ + +W + F HNHE+ DD
Sbjct: 100 NPRS--CPKTGCKAGLHMKRKEDE---KWVIYNFVKEHNHEICPDD 140
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 352 (129.0 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 99/371 (26%), Positives = 168/371 (45%)
Query: 261 DFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVVTFDTSYRSITYGLLLGVWFGMDNHG 320
+F+Y ++ + N+ W + AY+ FGDV+ FDT+ S Y L L + G+++HG
Sbjct: 288 NFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNAYELPLVAFVGINHHG 347
Query: 321 KAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVV 380
I GC LL D+S ++ W + ++ M GR PQ +T+ +R +++ P H +
Sbjct: 348 DTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQCKAMRTAVSEVFPRAHHRL 407
Query: 381 CIWHIXXXXXXXXXXXXXXQYEEFKAEFDMLCRLESVEDFEHQWNHFVARFGLVSDKHVA 440
+ H+ + L+ VE+FE W + RFG+ +++ +
Sbjct: 408 SLTHVLHNICQSVVQLQDSDLFPMALNRVVYGCLK-VEEFETAWEEMIIRFGMTNNETIR 466
Query: 441 LLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTF-FKKILSEQTCLQVFFEQVCAAAFGN 499
+F R W Y++ FLA +T F F + E T L+ F E +
Sbjct: 467 DMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIFSGYVHENTSLREFLEGYESFLDKK 526
Query: 500 STREGV------QYV-HIKTCMPIEEHARSILTPYAFRVLQHEI-VLSTQYATTEM-TNG 550
TRE + + + +KT P E + T FR Q E+ +S+ + T++ +NG
Sbjct: 527 YTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNG 586
Query: 551 SYLVRHYKKMDGE----YLVIW-IPEDEQIHCSCK--EFEHSGILCRHSLRVLVVKNYFQ 603
S K+ +G+ + VI+ Q+ C C F +G CRH L +L +
Sbjct: 587 SASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQE 646
Query: 604 LPEKYLLLRWR 614
+P +Y+L RWR
Sbjct: 647 VPPQYILQRWR 657
Score = 118 (46.6 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 36/104 (34%), Positives = 49/104 (47%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYR-SGFNQPRKK 115
P G F+S D+A+ +Y+++AR+ GF+IR S +N R +C GF K
Sbjct: 95 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGF----KL 150
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNH 159
H R RK R GC A + L D +W V Q HNH
Sbjct: 151 LKDAHSR-RKETRTGCQAMIRLRLIHFD---RWKVDQVKLDHNH 190
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 385 (140.6 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 105/381 (27%), Positives = 180/381 (47%)
Query: 276 NIAWSFGDSIRAYTLFGDVVTFDTSYR-SITYGLLLGVWFGMDNHGKAIFFGCVLLQDES 334
N+ W+ YT FGD + FDT+YR Y + + G ++HG+ + FGC L+ +ES
Sbjct: 45 NVFWADPTCRLNYTYFGDTLVFDTTYRRGKRYQVPFAAFTGFNHHGQPVLFGCALILNES 104
Query: 335 THSFAWALQTFVRFMRGRHPQTILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXX 394
SFAW QT+++ M P +I + D ++ +++R T+ + +
Sbjct: 105 ESSFAWLFQTWLQAMSAPPPPSITVEPDRLIQVAVSRVFSQTR-LRFSQPLIFEETEEKL 163
Query: 395 XXXXXQYEEFKAEF-DMLCRLESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSY 453
+ F++EF + + E+ +FE W+ V R+ + + + +++ R W+ +
Sbjct: 164 AHVFQAHPTFESEFINCVTETETAAEFEASWDSIVRRYYMEDNDWLQSIYNARQQWVRVF 223
Query: 454 IRGYFLARMMTVEFSQSVDTFFKKILSEQTCLQVFFEQVCAAAFGNSTRE-GVQYVH--- 509
IR F + T E S +++FF+ + T +Q+ +Q A +E Y
Sbjct: 224 IRDTFYGELSTNEGSSILNSFFQGFVDASTTMQMLIKQYEKAIDSWREKELKADYEATNS 283
Query: 510 ---IKTCMPIEEHARSILTPYAFRVLQHEIV----LSTQYATTEMTNGSYLVRHYKKMDG 562
+KT P+E+ A S+ T AF Q E V + + T+ +Y V + ++
Sbjct: 284 TPVMKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPANIISDSGTHTTYRVAKFGEVHK 343
Query: 563 EYLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENSLV-T 621
+ V + + + +CSC+ FE+SGI+CRH L V KN LP +YLL RW E + T
Sbjct: 344 GHTVSFDSLEVKANCSCQMFEYSGIICRHILAVFSAKNVLALPSRYLLRRWTKEAKIRGT 403
Query: 622 MEGPNPQSSSDECAQ-AFHSL 641
E P + E F+SL
Sbjct: 404 EEQPEFSNGCQESLNLCFNSL 424
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 253 (94.1 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 80/359 (22%), Positives = 154/359 (42%)
Query: 236 LLTEKRENDTLELLEACKNMAERDVDFVYDYTTDENEKVENIAWSFGDSIRAYTLFGDVV 295
LL KR D+ + M + +F Y ++ ++ N+ W+ S + + FGDV+
Sbjct: 240 LLNLKR-GDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVI 298
Query: 296 TFDTSYRSITYGLLLGVWFGMDNHGKAIFFGCVLLQDESTHSFAWALQTFVRFMRGRHPQ 355
D+SY S + + L + G+++HGK C L E+ S+ W L+ ++ M+ R PQ
Sbjct: 299 FIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMK-RSPQ 357
Query: 356 TILTDIDLGLRDSIARELPNTKHVVCIWHIXXXXXXXXXXXXXXQYEEFKAEFDM-LCRL 414
TI+TD L +I++ P + + HI Y+ + F +
Sbjct: 358 TIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLH--NYDAVRKAFTKAVYET 415
Query: 415 ESVEDFEHQWNHFVARFGLVSDKHVALLFSYRAFWLFSYIRGYFLARMMTVEFSQSVDTF 474
V +FE W V FG++ ++ + L+ RA W Y++ F A + +++ F
Sbjct: 416 LKVVEFEAAWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPF 475
Query: 475 FKKILSEQTCLQVFFEQVCAAAFGNSTREGVQYVHIKTCMPIEEHARSILTPYAFRVLQH 534
F++ + +QT L+ F ++ A E + + +T E + R+
Sbjct: 476 FERYVHKQTPLKEFLDKYELALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTR 535
Query: 535 EIVLSTQYATTEMTNGSYLVRHYKKMDGEYLVIWIPEDEQIHCSCKEFEHSGILCRHSL 593
++ Q EM + + + +DG +++ + E + S +E +L S+
Sbjct: 536 DMFKKFQIEVEEMYSCFSTTQVH--VDGPFVIFLVKERVRGESSRREIRDFEVLYNRSV 592
Score = 113 (44.8 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARST-ESQNLGIYRRDFVCYRSGFNQPRKK 115
P VG F+S D+A+ YY+ +A + GF +R S + ++ Y C GF K+
Sbjct: 85 PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGF----KR 140
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL 161
N + R RK R GC A + + + VD +W V + + HNH L
Sbjct: 141 IN-DVNRVRKETRTGCPAMIRMRQ--VDS-KRWRVVEVTLDHNHLL 182
Score = 109 (43.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 43/185 (23%), Positives = 81/185 (43%)
Query: 510 IKTCMPIEEHARSILTPYAFRVLQHEIV-LSTQYATTEM-TNGSYLVRHYK-KMDGE--- 563
+KT E I T F+ Q E+ + + ++TT++ +G +++ K ++ GE
Sbjct: 519 LKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSR 578
Query: 564 -----YLVIWIPEDEQIHCSCKEFEHSGILCRHSLRVLVVKNYFQLPEKYLLLRWRLENS 618
+ V++ ++ C C F G LCRH+L VL ++P +Y+L RWR +
Sbjct: 579 REIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPLRYILPRWRKDYK 638
Query: 619 LVTM--EGPNPQSSSDECAQAFHSL---AAALLTESMISKERFSYVHKELTGLLDHVRNM 673
+ G + Q F L + ++ E +S + + + L LD V ++
Sbjct: 639 RLHFADNGLTGFVDGTDRVQWFDQLYKNSLQVVEEGAVSLDHYKVAMQVLQESLDKVHSV 698
Query: 674 PETNE 678
E +
Sbjct: 699 EEKQD 703
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGI-YRRDFVCYRSGFNQPRKK 115
PYVGQ F+S+ A +Y+ +A K GF IR ++ + S++ G R VC + G+ P K+
Sbjct: 70 PYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKR 129
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELL 162
V R R R GC A + + KE G +W +++F HNH L+
Sbjct: 130 DKVI--RQRAETRVGCKAMILIRKEN-SG--KWVITKFVKEHNHSLM 171
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG--IYRRDFVCYRSGFNQPRK 114
P++G F+S++ A +Y N+A GF +R S G ++RR VC + GF + R
Sbjct: 33 PFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRR-LVCNKEGFRRSRP 91
Query: 115 KANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELL 162
+ + E + R R GC A + + +E G W V++F HNH LL
Sbjct: 92 RRS-ESRKPRAITREGCKALIVVKRE-KSGT--WLVTKFEKEHNHPLL 135
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGF--NQPR 113
P G IF+S+D A +Y +++R+ GF +R S+ G I R F C + G +
Sbjct: 22 PREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRG 81
Query: 114 KKANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRMLPAY 173
K +V PR S R GC A +++ D +W +++F HNH L+ +
Sbjct: 82 KFGSVRKPRP--STREGCKAMIHVK---YDRSGKWVITKFVKEHNHPLVVSPREARHTLD 136
Query: 174 RKIQEADQERILLLSK----AGFP--VNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCK 227
K + + I L +K A + ++ K++E E Q I K V N V K
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVE-EHSNQ------IAKKVENVVNNLK 189
Query: 228 KTVQENDALLTEKRE 242
+ ALL K++
Sbjct: 190 EFEHLEHALLRSKQD 204
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 120 (47.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 57 PYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKK 115
PYVG F+S++EA ++Y ++++ GF +R + S G R C + GF ++
Sbjct: 10 PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQR 69
Query: 116 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNVHNHEL 161
++ R+ GC A + L K G +W V++F HNH L
Sbjct: 70 SSSSSSSSRE----GCKATI-LVKMEKSG--KWVVTRFIKEHNHSL 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 690 657 0.00096 120 3 11 22 0.48 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 626 (67 KB)
Total size of DFA: 400 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.12u 0.12s 59.24t Elapsed: 00:00:03
Total cpu time: 59.12u 0.12s 59.24t Elapsed: 00:00:03
Start: Tue May 21 11:37:18 2013 End: Tue May 21 11:37:21 2013