Your job contains 1 sequence.
>005580
MASSLTVNTLQQQNQLFSLTLCKSSPPTLTVFNFQFLSRFLSSSPPKRTPLLVFKAHVRN
TQAKLSTTETEHETSTVTLRTRKGTASGASSLGTRDKRVDSAGEEKDGKRLTKDNNSRKN
FAFLKSREMSSGNSSLRSKDKKIGIKSSKTVNREVDNQKMEQRTNDSGQYKVRGITDEKG
SKKSKKDRSEQFQLRVELDMCSKRGDVMGAIRLYDKAQREGIKLGQYHYNVLLYLCSSAA
VGVVKPAKSGSGMRTLDTFEVSTMNSTELGDSRDMDNNGQLDYGSSPMIDKLESNSSYRF
DDLDSTFNEKENLGQFSNGHMKLNSQLLDGRSNLERGPDDQSRKKDWSIDNQDADEIRLS
EDAKKYAFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGINP
RLRSYGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLL
HKLRTSVRKVSPSTADVIAKWFNSKEAARLGKKKWNESLIKDTMENKGGGWHGLGWLGKG
KWIVSHTTVGGDALCKCCGEKLAIIDLDPIETEKFAESVASIAIKRERNSSFQKFQKWLD
YYGPFEAVVDAANVGLYSQRNFKPARVNAVVNGIRQKFPSKKWPLIVLHNRRITGHKMDQ
PVNRALIEKWKNADALYATPTGSNDDCYKV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005580
(690 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2045432 - symbol:PRORP1 "proteinaceous RNase P... 807 9.7e-99 2
TAIR|locus:2059824 - symbol:PRORP2 "proteinaceous RNase P... 586 1.2e-67 2
TAIR|locus:2141662 - symbol:PRORP3 "AT4G21900" species:37... 561 2.6e-65 2
TAIR|locus:2175178 - symbol:AT5G60430 species:3702 "Arabi... 173 4.1e-12 1
TAIR|locus:2026192 - symbol:RPF2 "rna processing factor 2... 132 4.7e-05 1
TAIR|locus:2065428 - symbol:AT2G01740 "AT2G01740" species... 126 0.00018 1
TAIR|locus:2197424 - symbol:EMB3103 "EMBRYO DEFECTIVE 310... 105 0.00052 2
TAIR|locus:2084978 - symbol:AT3G04760 species:3702 "Arabi... 117 0.00090 2
>TAIR|locus:2045432 [details] [associations]
symbol:PRORP1 "proteinaceous RNase P 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IMP;IDA] [GO:0008033 "tRNA processing" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002885
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008033 PROSITE:PS51375 EMBL:AC006223 Pfam:PF01535
Pfam:PF13812 eggNOG:NOG68490 GO:GO:0004526 EMBL:AY091059
EMBL:BT015418 IPI:IPI00540508 PIR:E84730 RefSeq:NP_850186.1
UniGene:At.38106 PDB:4G23 PDB:4G24 PDB:4G25 PDB:4G26 PDBsum:4G23
PDBsum:4G24 PDBsum:4G25 PDBsum:4G26 ProteinModelPortal:Q66GI4
PaxDb:Q66GI4 PRIDE:Q66GI4 EnsemblPlants:AT2G32230.1 GeneID:817782
KEGG:ath:AT2G32230 GeneFarm:4941 TAIR:At2g32230
HOGENOM:HOG000006117 InParanoid:Q66GI4 OMA:KLDMCSK PhylomeDB:Q66GI4
ProtClustDB:CLSN2679969 Genevestigator:Q66GI4 Uniprot:Q66GI4
Length = 572
Score = 807 (289.1 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 157/329 (47%), Positives = 216/329 (65%)
Query: 360 SEDAKKYAFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGIN 419
+E + RGF+I+++M +D+V NEA+ T R+A++ D +MAFDMVK+MK+ GI
Sbjct: 149 TESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQ 208
Query: 420 PRLRSYGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYL 479
PRLRSYGPAL FC GD DKA V+ HM+E V PEEPEL ALL+VS++ D+VY
Sbjct: 209 PRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKT 268
Query: 480 LHKLRTSVRKVSPSTADVIAKWFNSKEAARLGKKKWNESLIKDTMENXXXXXXXXXXXXX 539
L +LR VR+VS ST D+I +WF S+ A + G KKW+ I+D + +
Sbjct: 269 LQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGT 328
Query: 540 XXXIVSHTTVGGDALCKCCGEKLAIIDLDPIETEKFAESVASIAIKRERNSSFQKFQKWL 599
V T + + +CKCC EKL ID++P+ETE FA S+ +A +RE ++F +FQ+WL
Sbjct: 329 GKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWL 388
Query: 600 DYYGPFEAVVDAANVGLYSQRNFKPARVNAVVNGIRQKFPSKKWPLIVLHNRRITGHKMD 659
+ +GPF+AV+D AN+GL +QR+F ++N V +Q PSK+ PL++LH R+ G
Sbjct: 389 ERHGPFDAVIDGANMGLVNQRSFSFFQLNNTVQRCQQISPSKRLPLVILHKSRVNGGPAT 448
Query: 660 QPVNRALIEKWKNADALYATPTGSNDDCY 688
P NRAL+EKWKNA ALYATP GSNDD Y
Sbjct: 449 YPKNRALLEKWKNAGALYATPPGSNDDWY 477
Score = 193 (73.0 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 41/86 (47%), Positives = 56/86 (65%)
Query: 178 EKGSKKSKK---DRSEQFQLRVELDMCSKRGDVMGAIRLYDKAQREGIKLGQYHYNVLLY 234
E S+K+KK +S + L+ +LDMCSK+GDV+ A+RLYD+A+R G++L QYHYNVLLY
Sbjct: 81 ENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLY 140
Query: 235 LCSSAAVGVVKPAKSGSGMRTLDTFE 260
+CS A G R D F+
Sbjct: 141 VCSLAEAATESSPNPGLS-RGFDIFK 165
Score = 37 (18.1 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 359 LSEDAKKYAFQRGFEIYEKMCLD 381
LS AKK A Q+ E K LD
Sbjct: 83 LSRKAKKKAIQQSPEALLKQKLD 105
>TAIR|locus:2059824 [details] [associations]
symbol:PRORP2 "proteinaceous RNase P 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0016020 "membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001682 "tRNA 5'-leader removal" evidence=IDA]
[GO:0004526 "ribonuclease P activity" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IMP] [GO:0043144 "snoRNA processing"
evidence=IMP] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006397 EMBL:AC005825 PROSITE:PS51375 GO:GO:0043144
InterPro:IPR021869 Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526
GO:GO:0001682 HOGENOM:HOG000006117 EMBL:AK175948 IPI:IPI00545620
IPI:IPI00657270 PIR:E84542 RefSeq:NP_179256.3 UniGene:At.29161
ProteinModelPortal:Q680B9 PaxDb:Q680B9 PRIDE:Q680B9
EnsemblPlants:AT2G16650.1 GeneID:816166 KEGG:ath:AT2G16650
TAIR:At2g16650 InParanoid:Q680B9 OMA:EIQESEM PhylomeDB:Q680B9
ProtClustDB:CLSN2681692 Genevestigator:Q680B9 Uniprot:Q680B9
Length = 528
Score = 586 (211.3 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 127/337 (37%), Positives = 193/337 (57%)
Query: 367 AFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLG-IN-PRLRS 424
A RGFEI+++M + NEAS+T+V R+A + G+GD AF +VK S+G ++ PRLR+
Sbjct: 89 AIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIPRLRT 148
Query: 425 YGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLLHKLR 484
Y PAL FC + +K VEEHM G+ EE E+ ALL+VS G+ ++VY LHKLR
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGRENKVYRYLHKLR 208
Query: 485 TSVRKVSPSTADVIAKWFNSKEAARLGKKKWNES--LIKDTMENXXXXXXXXXXXXXXXX 542
V VS T +I +WF ++A +G ++++ + N
Sbjct: 209 EYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGHGWVGEGKW 268
Query: 543 IVSHTTVGGDALCKCCGEKLAIIDLDPIETEKFAESVASIAIKR-------ERNSSFQKF 595
V V C C E+LA +D + +ET+KF +S+ ++A+ R E N F +F
Sbjct: 269 TVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVFSEF 328
Query: 596 QKWLDYYGPFEAVVDAANVGLYSQR----NFKPARVNAVVNGIRQKFPSKKWPLIVLHNR 651
Q WL+ +G +EA+VD AN+GLY Q +F +++ +V+ + ++ + KWPLI+LH R
Sbjct: 329 QDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMKELYRESGNNKWPLILLHKR 388
Query: 652 RITGHKMDQPVNRALIEKWKNADALYATPTGSNDDCY 688
R+ ++ P +R L+E+W + LYATP GSNDD Y
Sbjct: 389 RVKT-LLENPTHRNLVEEWISNGVLYATPPGSNDDWY 424
Score = 119 (46.9 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 167 SGQYKVRGITDEKGS---KKSKKDRSEQFQLRVELDMCSKRGDVMGAIRLYDKAQREG-I 222
S Q++ R DE S KK K R+ + L L+ CSK D+ A+ LYD A +
Sbjct: 4 SDQHRSRR-HDESSSRPNKKKKVSRNPETNLLFNLNSCSKSKDLSAALALYDAAITSSEV 62
Query: 223 KLGQYHYNVLLYLCSSAAVGV 243
+L Q H+ LLYLCS++ +
Sbjct: 63 RLSQQHFQTLLYLCSASITDI 83
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 9/51 (17%), Positives = 29/51 (56%)
Query: 364 KKYAFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMK 414
+K ++G+E+ E M + + EA ++A+ +++ + G + + + +++
Sbjct: 158 EKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGRENKVYRYLHKLR 208
>TAIR|locus:2141662 [details] [associations]
symbol:PRORP3 "AT4G21900" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0001682
"tRNA 5'-leader removal" evidence=IDA] [GO:0004526 "ribonuclease P
activity" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0043144 "snoRNA processing" evidence=IMP] GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006397 EMBL:AL161556
PROSITE:PS51375 EMBL:AL021890 GO:GO:0043144 InterPro:IPR021869
Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526 GO:GO:0001682
HOGENOM:HOG000006117 EMBL:AK226669 EMBL:AK230440 IPI:IPI00543150
IPI:IPI00892032 PIR:T05472 RefSeq:NP_193921.2 UniGene:At.74070
ProteinModelPortal:F4JKB6 PRIDE:F4JKB6 EnsemblPlants:AT4G21900.1
GeneID:828279 KEGG:ath:AT4G21900 TAIR:At4g21900 OMA:SCEPMAD
Uniprot:F4JKB6
Length = 576
Score = 561 (202.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 127/337 (37%), Positives = 190/337 (56%)
Query: 367 AFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLG-IN-PRLRS 424
A RGF+I+++M + NE+S+TAV R+A + GDGD AF +VK + ++G ++ PRLR+
Sbjct: 148 AIDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRT 207
Query: 425 YGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLLHKLR 484
Y PAL FC+ + +K VE+HM G+ EE E+ ALL+VS G+ ++VY L KLR
Sbjct: 208 YAPALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLR 267
Query: 485 TSVRKVSPSTADVIAKWFNSKEAARLGKKKWNES--LIKDTMENXXXXXXXXXXXXXXXX 542
V VS T+ I +WF +A+ + L++ +
Sbjct: 268 ECVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKW 327
Query: 543 IVSHTTVGGDALCKCCGEKLAIIDLDPIETEKFAESVASIAIKRER--NS-----SFQKF 595
IV V C C E LA +D + +ETE F S+ ++A++R+ NS F +F
Sbjct: 328 IVKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEF 387
Query: 596 QKWLDYYGPFEAVVDAANVGLYSQR----NFKPARVNAVVNGIRQKFPSKKWPLIVLHNR 651
Q+WL+ +G +EA++D AN+GLY Q F ++ AVV + K SKK PLI+LH +
Sbjct: 388 QEWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKK 447
Query: 652 RITGHKMDQPVNRALIEKWKNADALYATPTGSNDDCY 688
R+ ++ P +R L+E+W N + LYATP GSNDD Y
Sbjct: 448 RVNA-LLENPNHRNLVEEWINNNVLYATPPGSNDDWY 483
Score = 122 (48.0 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 181 SKKSKKDRSEQFQLRVELDMCSKRGDVMGAIRLYDKA-QREGIKLGQYHYNVLLYLCSS 238
+KK K +R+ + L + L CSKR D+ A+ LYD A I+L Q H+ LLYLCS+
Sbjct: 79 NKKKKGNRNPEKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSA 137
>TAIR|locus:2175178 [details] [associations]
symbol:AT5G60430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
EMBL:CP002688 EMBL:AB011483 eggNOG:NOG68490 IPI:IPI00517211
RefSeq:NP_001032110.1 RefSeq:NP_200851.1 UniGene:At.49199
ProteinModelPortal:Q9FKK3 PaxDb:Q9FKK3 EnsemblPlants:AT5G60430.1
EnsemblPlants:AT5G60430.2 GeneID:836164 KEGG:ath:AT5G60430
TAIR:At5g60430 InParanoid:Q9FKK3 PhylomeDB:Q9FKK3
ProtClustDB:CLSN2686686 ArrayExpress:Q9FKK3 Genevestigator:Q9FKK3
Uniprot:Q9FKK3
Length = 156
Score = 173 (66.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 543 IVSHTTVGGDALCKCCGEKLAIIDLDPIETEKFAESVASIAIKRER--NSS-----FQKF 595
IV V C C E+LA +D + +ET+KF +S+ ++A++R+ NS F +F
Sbjct: 25 IVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMERKAKMNSCESDVVFSEF 84
Query: 596 QKWLDYYGPFEAVVDAANVGLYSQRNF 622
Q WL+ +G +EA+VD AN+GLY Q+NF
Sbjct: 85 QDWLEKHGDYEAIVDGANIGLY-QQNF 110
>TAIR|locus:2026192 [details] [associations]
symbol:RPF2 "rna processing factor 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0000966 "RNA 5'-end processing" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0003723 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007190 TIGRFAMs:TIGR00756 EMBL:AC005698 GO:GO:0000966
eggNOG:NOG320495 HOGENOM:HOG000015176 ProtClustDB:CLSN2682329
Pfam:PF12854 Pfam:PF13041 IPI:IPI00518837 RefSeq:NP_176454.1
UniGene:At.65045 ProteinModelPortal:Q9SXD1 SMR:Q9SXD1 STRING:Q9SXD1
PaxDb:Q9SXD1 PRIDE:Q9SXD1 EnsemblPlants:AT1G62670.1 GeneID:842564
KEGG:ath:AT1G62670 GeneFarm:4355 TAIR:At1g62670 InParanoid:Q9SXD1
OMA:ADEMMER PhylomeDB:Q9SXD1 ArrayExpress:Q9SXD1
Genevestigator:Q9SXD1 Uniprot:Q9SXD1
Length = 630
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 80/349 (22%), Positives = 154/349 (44%)
Query: 200 MCSKRGDVMGAIRLYDKAQREGIKLGQYHYNVLLY-LCS----SAAVGVVKPAKSGSGMR 254
+C KRGD A L +K ++ ++ G YN ++ LC A+ + K ++ G+R
Sbjct: 231 LC-KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET-KGIR 288
Query: 255 TLDTFEVSTMNSTELGDSRDMDNNGQLDYGSSPMIDKLESNSSYRFDDLDSTFNEKENLG 314
+ S++ S R D + L S MI++ + + F L F ++ L
Sbjct: 289 P-NVVTYSSLISCLCNYGRWSDASRLL----SDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 315 QFSNGHMKLNSQLLDGR----SNLERG---PD--DQSRKK-DWSIDNQDADEI----RLS 360
+ + ++ + +D S+L G D D++++ ++ + ++ L
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 361 EDAKKYA-FQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGIN 419
+ KY + G E++ +M + N + + + GD DMA ++ K M S G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 420 PRLRSYGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYL 479
P + +Y L C NG ++KA V E++ + P ++ +AGK + + L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 480 LHKLRTSVRKVSPSTADVIAKWFNSKEAA--RLGKKKWNESLIKDTMEN 526
L S++ V P DV+A +N+ + R G K+ ++L K+ E+
Sbjct: 524 FCNL--SLKGVKP---DVVA--YNTMISGFCRKGSKEEADALFKEMKED 565
>TAIR|locus:2065428 [details] [associations]
symbol:AT2G01740 "AT2G01740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006069 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00529210 PIR:E84428 RefSeq:NP_178283.1
UniGene:At.47033 UniGene:At.66449 ProteinModelPortal:Q9ZUA2
SMR:Q9ZUA2 EnsemblPlants:AT2G01740.1 GeneID:814704
KEGG:ath:AT2G01740 GeneFarm:5003 TAIR:At2g01740 eggNOG:NOG248754
HOGENOM:HOG000241911 InParanoid:Q9ZUA2 OMA:LDITAYG PhylomeDB:Q9ZUA2
ProtClustDB:CLSN2683545 Genevestigator:Q9ZUA2 Uniprot:Q9ZUA2
Length = 559
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 364 KKYAFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGINPRLR 423
KK QR E+Y +M D V N T + GD D A + +M + G+ +
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 424 SYGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLLHKL 483
+YG +S C NG + +A + E M + + P+ ++ ++G+ + HKL
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
>TAIR|locus:2197424 [details] [associations]
symbol:EMB3103 "EMBRYO DEFECTIVE 3103" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 PROSITE:PS51375 EMBL:U95973 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AK226637 IPI:IPI00545549 PIR:H86242
RefSeq:NP_172560.2 UniGene:At.49873 ProteinModelPortal:Q0WVV0
SMR:Q0WVV0 PRIDE:Q0WVV0 EnsemblPlants:AT1G10910.1 GeneID:837634
KEGG:ath:AT1G10910 GeneFarm:4823 TAIR:At1g10910 eggNOG:NOG273187
HOGENOM:HOG000082904 InParanoid:Q0WVV0 OMA:MLRYSKR PhylomeDB:Q0WVV0
ProtClustDB:CLSN2691508 Genevestigator:Q0WVV0 Uniprot:Q0WVV0
Length = 664
Score = 105 (42.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 365 KYAFQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGINPRLRS 424
K + + E+ ++ + + M+ V + S G + A + +++MK G +P +
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 425 YGPALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLLHKLR 484
Y L+ + GD KA + M G+ P + + LL+V ++ G DR LL +L
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 485 TS 486
++
Sbjct: 335 SA 336
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 203 KRGDVMGAIRLYDKAQREGIKLGQYHYNVLLYLCSSAAVGVVK 245
K G + I+L+D+ +R+G+K YN LL C G K
Sbjct: 178 KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
>TAIR|locus:2084978 [details] [associations]
symbol:AT3G04760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AY056218 EMBL:AY133775 EMBL:AK221573
IPI:IPI00532561 RefSeq:NP_566237.1 UniGene:At.18557
ProteinModelPortal:Q9SR00 SMR:Q9SR00 STRING:Q9SR00 PaxDb:Q9SR00
PRIDE:Q9SR00 EnsemblPlants:AT3G04760.1 GeneID:819636
KEGG:ath:AT3G04760 TAIR:At3g04760 eggNOG:NOG279361
HOGENOM:HOG000238342 InParanoid:Q9SR00 OMA:NTMFSAL PhylomeDB:Q9SR00
ProtClustDB:CLSN2688070 Genevestigator:Q9SR00 Uniprot:Q9SR00
Length = 602
Score = 117 (46.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 368 FQRGFEIYEKMCLDEVPMNEASLTAVGRMAMSMGDGDMAFDMVKRMKSLGINPRLRSYGP 427
++ G ++ KM ++ N + + + G + A +++K MK G+ P SY P
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 428 ALSVFCNNGDVDKACSVEEHMLEHGVYPEEPELEALLRVSVEAGKGDRVYYLLHKL 483
++ FC G +D A E M+ G P+ +L + GK D+ + KL
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 49 (22.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 192 FQLRVELDMCSKRGDVMGAIRLYDKAQREGIKLGQYHYNVLLY-LCSSAAV 241
+ + +E M G V A++L D+ G+K + YN ++ +C V
Sbjct: 231 YTILIEATMLE--GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 690 637 0.00092 120 3 11 23 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 614 (65 KB)
Total size of DFA: 336 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.66u 0.12s 58.78t Elapsed: 00:00:03
Total cpu time: 58.66u 0.12s 58.78t Elapsed: 00:00:03
Start: Tue May 21 11:42:04 2013 End: Tue May 21 11:42:07 2013