Query 005582
Match_columns 690
No_of_seqs 478 out of 3160
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 18:56:49 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005582.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2088-2092//hhsearch_pdb/005582hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b99_A Mitogen-activated prote 1.0 1 1 476.7 28.8 294 135-429 53-355 (398)
2 4b9d_A Serine/threonine-protei 1.0 1 1 455.8 19.9 260 134-425 22-283 (350)
3 4fih_A Serine/threonine-protei 1.0 1 1 455.2 22.7 257 136-425 74-330 (346)
4 4fie_A Serine/threonine-protei 1.0 1 1 455.1 24.8 257 136-425 151-407 (423)
5 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 448.3 18.8 260 134-425 30-297 (311)
6 3uto_A Twitchin; kinase, muscl 1.0 1 1 441.7 25.0 266 135-432 156-424 (573)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 441.3 22.7 257 135-425 12-269 (275)
8 3ubd_A Ribosomal protein S6 ki 1.0 1 1 438.7 14.9 257 136-425 24-288 (304)
9 4f9c_A Cell division cycle 7-r 1.0 1 1 438.5 24.0 287 131-426 16-360 (361)
10 3v5w_A G-protein coupled recep 1.0 1 1 434.3 20.7 261 131-425 184-456 (689)
No 1
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=476.66 Aligned_cols=294 Identities=33% Similarity=0.527 Sum_probs=251.1
Q ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC----CCC
Q ss_conf 9980797365116964899999958993999999504799978899999999999938999710254247630----589
Q 005582 135 ADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSR----VSG 210 (690)
Q Consensus 135 ~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~----~~~ 210 (690)
.++|++++.||+|+||.||+|++..+|+.||||+++...........+.+|+.+|+.|+|||||++++++... ..+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
T ss_conf 89748988984260849999999899989999998740034688999999999998667999541765552035546688
Q ss_pred EEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf 39999942421335654089998899999999999999999999689854457776625505893476014653223468
Q 005582 211 SLYLVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCS 290 (690)
Q Consensus 211 ~lyLV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~ 290 (690)
.+|||||||+|+|...+... ..|++..++.|++||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 133 ~~~ivmE~~~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 133 SVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp CEEEEEECCSEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred EEEEEEECCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCC
T ss_conf 79999837999889999865-99999999999999999999999886767873713354278887787221434213467
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCC
Q ss_conf ---99986445456667698333399899983114430468999983899999999499999999870999956753158
Q 005582 291 ---QKQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSK 367 (690)
Q Consensus 291 ---~~~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~ 367 (690)
......+.+||++|+|||++.+...|+.++||||+||++|||++|++||.+.+..+++..|+...|.|+...|....
T Consensus 212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~ 291 (398)
T 4b99_A 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291 (398)
T ss_dssp ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred CCCCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 54566665662558676487876278889972221116899999997889989889899999999703899867763310
Q ss_pred CCCCCCCCCCC--CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 99666568988--510112211179954599999996247989889999886294789999999
Q 005582 368 LPHATIFKPQQ--PYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTKPLPC 429 (690)
Q Consensus 368 ~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~p~~~ 429 (690)
......+.... .....+...++.+++.+++||.+||.+||.+|+||.|+|+||||+..+.|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred HHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCC
T ss_conf 0234555530787688788985879999999999997749955791899996597238688974
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=455.84 Aligned_cols=260 Identities=27% Similarity=0.486 Sum_probs=227.6
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEE
Q ss_conf 89980797365116964899999958993999999504799978899999999999938999710254247630589399
Q 005582 134 KADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSLY 213 (690)
Q Consensus 134 ~~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~ly 213 (690)
..++|++++.||+|+||.||+|++..+|+.||||++.+..........+.+|+.+|+.|+|||||++++++.+ .+.+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~--~~~~y 99 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE--NGSLY 99 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CCEEE
T ss_conf 5125588479702779399999988999899999986587897999999999999987799898919999998--99999
Q ss_pred EEEECCCCC-HHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf 999424213-356540-899988999999999999999999996898544577766255058934760146532234689
Q 005582 214 LVFEYMEHD-LAGLAA-TPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQ 291 (690)
Q Consensus 214 LV~Ey~~g~-Ll~~~~-~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~ 291 (690)
||||||+|+ |...+. .....+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+...
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCC-
T ss_conf 9994889983999999738999978999999999999999999899151359789979878999897646521440688-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCC
Q ss_conf 99864454566676983333998999831144304689999838999999994999999998709999567531589966
Q 005582 292 KQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHA 371 (690)
Q Consensus 292 ~~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~ 371 (690)
....+..+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+.+|......
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~-------------- 243 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-------------- 243 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--------------
T ss_pred CCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC--------------
T ss_conf 541014578836039999879-99895999999999999999787998996999999999808999--------------
Q ss_pred CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 656898851011221117995459999999624798988999988629478999
Q 005582 372 TIFKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTK 425 (690)
Q Consensus 372 ~~~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~ 425 (690)
.....+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus 244 --------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 244 --------------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp --------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred --------------CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf --------------9975579999999999855896679089999639976167
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=455.18 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=223.4
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
Q ss_conf 98079736511696489999995899399999950479997889999999999993899971025424763058939999
Q 005582 136 DSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSLYLV 215 (690)
Q Consensus 136 ~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~lyLV 215 (690)
..|+++++||+|+||.||+|++..+|+.||||++...... ....+.+|+.+|+.++|||||+++++|.+ .+.+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CCEEEEE
T ss_conf 7538707960272829999999899989999998527656--89999999999986799899919999998--9999999
Q ss_pred EECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 94242133565408999889999999999999999999968985445777662550589347601465322346899986
Q 005582 216 FEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQKQPL 295 (690)
Q Consensus 216 ~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~~~~~ 295 (690)
||||+++.+..++... .+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+... ....
T Consensus 150 mEy~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~ 227 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRR 227 (346)
T ss_dssp ECCCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SCCB
T ss_pred EECCCCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCC-CCCC
T ss_conf 9698998089998718-9899999999999999999999888355627889978879998899027575366788-7753
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
Q ss_conf 44545666769833339989998311443046899998389999999949999999987099995675315899666568
Q 005582 296 TSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHATIFK 375 (690)
Q Consensus 296 ~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~~~~~ 375 (690)
.+.+||++|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..|..... +..
T Consensus 228 ~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~--------------- 290 (346)
T 4fih_A 228 KSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRL--------------- 290 (346)
T ss_dssp CCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCC---------------
T ss_pred CCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CCC---------------
T ss_conf 46562758279999779-9999689999999999999978799898599999999971799-988---------------
Q ss_pred CCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 98851011221117995459999999624798988999988629478999
Q 005582 376 PQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTK 425 (690)
Q Consensus 376 ~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~ 425 (690)
..+..+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus 291 ----------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 291 ----------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp ----------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ----------CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf ----------7502299999999999867995689099999609865689
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=455.08 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=224.2
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
Q ss_conf 98079736511696489999995899399999950479997889999999999993899971025424763058939999
Q 005582 136 DSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSLYLV 215 (690)
Q Consensus 136 ~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~lyLV 215 (690)
+.|+++++||+|+||.||+|++..+|+.||||++...... ....+.+|+.+|+.++|||||+++++|.+ .+.+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEE--CCEEEEE
T ss_conf 8438616962481848999999999989999998625546--89999999999985799898716899998--9999999
Q ss_pred EECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 94242133565408999889999999999999999999968985445777662550589347601465322346899986
Q 005582 216 FEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQKQPL 295 (690)
Q Consensus 216 ~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~~~~~ 295 (690)
||||+|+.+..++..+ .+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+.+... ....
T Consensus 227 mEy~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~ 304 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRR 304 (423)
T ss_dssp EECCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CCCB
T ss_pred EECCCCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCC-CCCC
T ss_conf 9698998289887616-9899999999999999999999889044657877789858999898037265477788-7643
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
Q ss_conf 44545666769833339989998311443046899998389999999949999999987099995675315899666568
Q 005582 296 TSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHATIFK 375 (690)
Q Consensus 296 ~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~~~~~ 375 (690)
...+||++|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+..|..... +..
T Consensus 305 ~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~--------------- 367 (423)
T 4fie_A 305 KSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRL--------------- 367 (423)
T ss_dssp CCCEECTTTCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCC---------------
T ss_pred CCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CCC---------------
T ss_conf 46664747279999779-9999689999999999999978799898699999999972799-887---------------
Q ss_pred CCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 98851011221117995459999999624798988999988629478999
Q 005582 376 PQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTK 425 (690)
Q Consensus 376 ~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~ 425 (690)
..+..+++.+.+||.+||..||.+|+|+.|+|+||||+..
T Consensus 368 ----------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 368 ----------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp ----------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ----------CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf ----------6501299999999999867895689099999609875689
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=448.27 Aligned_cols=260 Identities=28% Similarity=0.403 Sum_probs=224.7
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCC-CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEE
Q ss_conf 89980797365116964899999958993999999504799-97889999999999993899971025424763058939
Q 005582 134 KADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNM-DPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSL 212 (690)
Q Consensus 134 ~~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~-~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~l 212 (690)
..++|++++.||+|+||+||+|++..+++.||||++.+... .......+.+|+.+|+.|+|||||+++++|.+ .+.+
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~ 107 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD--DEKL 107 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEE
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--CCEE
T ss_conf 85236898898316484999999999998999999888887797899999999999986799898919999973--8989
Q ss_pred EEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 99994242133565408999889999999999999999999968985445777662550589347601465322346899
Q 005582 213 YLVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQK 292 (690)
Q Consensus 213 yLV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~~ 292 (690)
|||||||+|+.+..++.....|++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+|+.+.....
T Consensus 108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 99996489989999998749999999999999999999999988782687878996985898889987687502577877
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCC
Q ss_conf -9864454566676983333998999831144304689999838999999994999999998709999567531589966
Q 005582 293 -QPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHA 371 (690)
Q Consensus 293 -~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~ 371 (690)
....+.+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+.+..+.+.+|.+.-..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-------------- 252 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD-------------- 252 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------------
T ss_pred CCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC--------------
T ss_conf 654367556803079989768-99996898998999999997498998997999999999719999--------------
Q ss_pred CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHH------HHCCCCCCCC
Q ss_conf 65689885101122111799545999999962479898899998------8629478999
Q 005582 372 TIFKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASS------ALQNEFFTTK 425 (690)
Q Consensus 372 ~~~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~e------iL~Hpwf~~~ 425 (690)
....+++++++||.+||..||.+|+|++| +++||||+..
T Consensus 253 ---------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 253 ---------------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp ---------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred ---------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCC
T ss_conf ---------------996569999999999762897578096797587798779875898
No 6
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=441.73 Aligned_cols=266 Identities=24% Similarity=0.383 Sum_probs=231.5
Q ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEE
Q ss_conf 99807973651169648999999589939999995047999788999999999999389997102542476305893999
Q 005582 135 ADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSLYL 214 (690)
Q Consensus 135 ~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~lyL 214 (690)
.++|++++.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.|+|||||+++++|.+ ...+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFED--DNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC--SSEEEE
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC--HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--CCEEEE
T ss_conf 536189889961648499999998899899999991524--2059999999999986899898949999998--998899
Q ss_pred EEECCCCC-HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCEEEECCCCCCCCCCCC
Q ss_conf 99424213-356540899988999999999999999999996898544577766255058--934760146532234689
Q 005582 215 VFEYMEHD-LAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYN--GILKIGDFGLANFFKCSQ 291 (690)
Q Consensus 215 V~Ey~~g~-Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~--g~vKL~DFGlA~~~~~~~ 291 (690)
|||||+|+ |...+......|++..++.|+.||+.||.|||+++|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~-- 309 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-- 309 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--
T ss_pred EEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCC--
T ss_conf 986069995999999867999999999999999999999998892305687655121478889789940663068569--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCC
Q ss_conf 99864454566676983333998999831144304689999838999999994999999998709999567531589966
Q 005582 292 KQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHA 371 (690)
Q Consensus 292 ~~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~ 371 (690)
.......+||++|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+++..|......++...
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~-~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--------- 379 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA--------- 379 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGG---------
T ss_pred CCCEEEEEECCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC---------
T ss_conf 982323477945149999689-9989699999999999999978799798699999999984899989532---------
Q ss_pred CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 6568988510112211179954599999996247989889999886294789999999999
Q 005582 372 TIFKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTKPLPCDPS 432 (690)
Q Consensus 372 ~~~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~p~~~~p~ 432 (690)
+..+++.+++||.+||..||.+|||+.|+|+||||+....+....
T Consensus 380 ----------------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~~~~ 424 (573)
T 3uto_A 380 ----------------FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424 (573)
T ss_dssp ----------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTTTTC
T ss_pred ----------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCHH
T ss_conf ----------------468999999999988648956892999995395748798987542
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=441.31 Aligned_cols=257 Identities=27% Similarity=0.427 Sum_probs=224.8
Q ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEE
Q ss_conf 99807973651169648999999589939999995047999-78899999999999938999710254247630589399
Q 005582 135 ADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNMD-PESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSLY 213 (690)
Q Consensus 135 ~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~-~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~ly 213 (690)
.++|++++.||+|+||+||+|.+..+++.||||++.+.... ......+.+|+.+|+.++|||||++++++.+ .+.+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--~~~~~ 89 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS--KDEII 89 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEE
T ss_pred EECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--CCEEE
T ss_conf 3386899998217681999999999998999999837886787899999999999987799899929999998--99899
Q ss_pred EEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 99942421335654089998899999999999999999999689854457776625505893476014653223468999
Q 005582 214 LVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQKQ 293 (690)
Q Consensus 214 LV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~~~ 293 (690)
|||||++|+|+..+...+ .+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.... ..
T Consensus 90 ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~~ 166 (275)
T 3hyh_A 90 MVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GN 166 (275)
T ss_dssp EEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred EEEECCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC--CC
T ss_conf 999278997899998749-999999999999999999999988930666875876887999899945477726678--87
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
Q ss_conf 86445456667698333399899983114430468999983899999999499999999870999956753158996665
Q 005582 294 PLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHATI 373 (690)
Q Consensus 294 ~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~~~ 373 (690)
...+.+||+.|+|||++.+..+++.++||||+||++|+|++|++||.+.+..+.+..|......
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~---------------- 230 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT---------------- 230 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC----------------
T ss_pred CCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC----------------
T ss_conf 4677028935277455068988898365687899999999887998998999999999749999----------------
Q ss_pred CCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 6898851011221117995459999999624798988999988629478999
Q 005582 374 FKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGTASSALQNEFFTTK 425 (690)
Q Consensus 374 ~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~ 425 (690)
....+++.+.+||.+||+.||.+|||++|+|+||||+..
T Consensus 231 -------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 231 -------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp -------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred -------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf -------------987799999999999865896689199999719200658
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=438.70 Aligned_cols=257 Identities=28% Similarity=0.430 Sum_probs=220.8
Q ss_pred CCCEEEEEEECCCCEEEEEEEEC---CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEE
Q ss_conf 98079736511696489999995---899399999950479997889999999999993899971025424763058939
Q 005582 136 DSFEKLDKIGQGTYSSVYKARDL---ENNKLVALKKVRFTNMDPESVRFMAREIIILRRLDHPNIMKLEGLITSRVSGSL 212 (690)
Q Consensus 136 ~~Y~~~~~IG~G~fG~Vy~a~~~---~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~~~~~~l 212 (690)
++|++++.||+|+||.||+|++. .+++.||||+++...........+.+|+.+|+.++|||||++++++.+ .+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT--EGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE--TTEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--CCEE
T ss_conf 56589889721888399999985588789799999981577684789999999999987799799909999998--9999
Q ss_pred EEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 99994242133565408999889999999999999999999968985445777662550589347601465322346899
Q 005582 213 YLVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANFFKCSQK 292 (690)
Q Consensus 213 yLV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~~~~~~~ 292 (690)
|||||||+|+.+..++.....+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+..... .
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 180 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-E 180 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCC-C
T ss_conf 999975799888999975599999999999999999999999779958888789957868998876236634332688-7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
Q ss_conf 98644545666769833339989998311443046899998389999999949999999987099995675315899666
Q 005582 293 QPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHAT 372 (690)
Q Consensus 293 ~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~~ 372 (690)
....+.+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+.+.+|.+....
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~--------------- 244 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG--------------- 244 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC---------------
T ss_pred CCCCCCCCCCCCCCHHHHCC-CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC---------------
T ss_conf 63045441815079999656-88787776361199999998598998984999999999718999---------------
Q ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCC
Q ss_conf 5689885101122111799545999999962479898899-----9988629478999
Q 005582 373 IFKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGT-----ASSALQNEFFTTK 425 (690)
Q Consensus 373 ~~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpT-----a~eiL~Hpwf~~~ 425 (690)
.+..+++++.+||.+||+.||.+||| ++|+|+||||+..
T Consensus 245 --------------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 245 --------------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp --------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred --------------CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCC
T ss_conf --------------98768999999999986469878799986789999769040378
No 9
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=1.00 E-value=1 Score=438.45 Aligned_cols=287 Identities=28% Similarity=0.405 Sum_probs=229.8
Q ss_pred CCCCCCCCEEEEEEECCCCEEEEEEEEC---CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEE
Q ss_conf 6788998079736511696489999995---8993999999504799978899999999999938-99971025424763
Q 005582 131 VPRKADSFEKLDKIGQGTYSSVYKARDL---ENNKLVALKKVRFTNMDPESVRFMAREIIILRRL-DHPNIMKLEGLITS 206 (690)
Q Consensus 131 ~~~~~~~Y~~~~~IG~G~fG~Vy~a~~~---~~g~~VAIK~i~~~~~~~~~~~~~~rEi~iL~~L-~HpnIv~l~~~~~~ 206 (690)
+|...+.|++.++||+|+||+||+|++. .+++.||+|++.... ....+.+|+.+|+.+ +||||++++++|.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCC----CHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_conf 4875682799899822618199999971668989789999975666----799999999999971599987669999998
Q ss_pred CCCCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf 0589399999424213356540899988999999999999999999996898544577766255058-934760146532
Q 005582 207 RVSGSLYLVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYN-GILKIGDFGLAN 285 (690)
Q Consensus 207 ~~~~~lyLV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~-g~vKL~DFGlA~ 285 (690)
.+++|||||||+++.+..+.. .+++.+++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+
T Consensus 92 --~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 92 --NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp --TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred --CCEEEEEEECCCCCCHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCCCEEEECCCCCCC
T ss_conf --999999993788521999872---899999999999999999999978917575877996885899918977677774
Q ss_pred CCCCCC---------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCC
Q ss_conf 234689---------------------------99864454566676983333998999831144304689999838999
Q 005582 286 FFKCSQ---------------------------KQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPI 338 (690)
Q Consensus 286 ~~~~~~---------------------------~~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~p 338 (690)
...... ....+..+||++|+|||++.+...|+.++||||+||++|||++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 36776532122233333223344454432235654114655673326989980899989821045429999999978899
Q ss_pred C-CCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC--CCCCC-----------------------CCCHHHHHHCCCCC
Q ss_conf 9-9999499999999870999956753158996665--68988-----------------------51011221117995
Q 005582 339 M-PGRTEVEQLHKIFKLCGSPSEEYWKRSKLPHATI--FKPQQ-----------------------PYKRCVAETFKDIP 392 (690)
Q Consensus 339 F-~g~~~~e~l~kI~~~~G~p~~e~~~~~~~~~~~~--~~~~~-----------------------p~~~~~~~~~~~~~ 392 (690)
| .+.++.+++..|+..+|++....+.......... ..+.. .......+.+..++
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89999879999999984089620001222022222334576202567777640244446432211112334432344599
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4599999996247989889999886294789999
Q 005582 393 SSALSLLDILLSTEPEVRGTASSALQNEFFTTKP 426 (690)
Q Consensus 393 ~~~~dLL~~lL~~DP~kRpTa~eiL~Hpwf~~~p 426 (690)
++++|||.+||++||.+|+||+|+|+||||++.+
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 9999999987769935790899996692307898
No 10
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=434.29 Aligned_cols=261 Identities=25% Similarity=0.355 Sum_probs=215.4
Q ss_pred CCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCC----CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 67889980797365116964899999958993999999504799----97889999999999993899971025424763
Q 005582 131 VPRKADSFEKLDKIGQGTYSSVYKARDLENNKLVALKKVRFTNM----DPESVRFMAREIIILRRLDHPNIMKLEGLITS 206 (690)
Q Consensus 131 ~~~~~~~Y~~~~~IG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~----~~~~~~~~~rEi~iL~~L~HpnIv~l~~~~~~ 206 (690)
.+...++|++++.||+|+||.||+|++..+|+.||||++.+... ..........++.+++.++|||||+++++|.+
T Consensus 184 ~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~ 263 (689)
T 3v5w_A 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 263 (689)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred CCCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 99956892888898316483999999999998999999757882525568999999999999964899987179999998
Q ss_pred CCCCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 05893999994242133565408999889999999999999999999968985445777662550589347601465322
Q 005582 207 RVSGSLYLVFEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLHGLEHCHSRGILHRDIKGSNLLIDYNGILKIGDFGLANF 286 (690)
Q Consensus 207 ~~~~~lyLV~Ey~~g~Ll~~~~~~~~~l~e~~i~~i~~qIl~gL~yLHs~gIiHrDIKp~NILid~~g~vKL~DFGlA~~ 286 (690)
...+|||||||.|+.+..++.....|++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||+|+.
T Consensus 264 --~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 264 --PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp --SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred --CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEE
T ss_conf --998899994689982999998669999999999999999999999978854168866875980899889645655666
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCH---HHHHHHHHHHHCCCCHHHH
Q ss_conf 3468999864454566676983333998999831144304689999838999999994---9999999987099995675
Q 005582 287 FKCSQKQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSSGCILAELFAGKPIMPGRTE---VEQLHKIFKLCGSPSEEYW 363 (690)
Q Consensus 287 ~~~~~~~~~~~~~gT~~Y~APEvl~g~~~ys~ksDIWSlGviL~ELltG~~pF~g~~~---~e~l~kI~~~~G~p~~e~~ 363 (690)
+... ...+.+||+.|+|||++.+...|+.++|||||||++|||++|.+||.+.+. .+....+... .
T Consensus 342 ~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--~------ 410 (689)
T 3v5w_A 342 FSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--A------ 410 (689)
T ss_dssp CSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--C------
T ss_pred CCCC---CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--C------
T ss_conf 3789---8777657867318899847999995999999999999998687999999867799999850579--8------
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCC
Q ss_conf 3158996665689885101122111799545999999962479898899-----9988629478999
Q 005582 364 KRSKLPHATIFKPQQPYKRCVAETFKDIPSSALSLLDILLSTEPEVRGT-----ASSALQNEFFTTK 425 (690)
Q Consensus 364 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~dLL~~lL~~DP~kRpT-----a~eiL~Hpwf~~~ 425 (690)
...+..+++++.+||.+||+.||.+|++ ++++++||||+..
T Consensus 411 ---------------------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 411 ---------------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp ---------------------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCC
T ss_conf ---------------------8887669999999999976089868799988899999669150478
Done!