Query 005586
Match_columns 689
No_of_seqs 676 out of 4750
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 01:47:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.7E-63 3.7E-68 600.2 45.0 534 70-682 406-954 (968)
2 KOG1187 Serine/threonine prote 100.0 1.9E-58 4.2E-63 486.2 28.1 278 397-681 63-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.9E-49 4E-54 414.7 24.3 254 414-679 46-303 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 7E-49 1.5E-53 408.0 21.4 262 396-680 200-462 (468)
5 KOG0581 Mitogen-activated prot 100.0 2.7E-48 5.9E-53 385.8 19.2 261 398-679 75-339 (364)
6 KOG1026 Nerve growth factor re 100.0 7.8E-48 1.7E-52 418.8 18.7 261 412-684 489-767 (774)
7 KOG0196 Tyrosine kinase, EPH ( 100.0 3.2E-46 7E-51 397.4 11.7 257 411-682 631-894 (996)
8 KOG0595 Serine/threonine-prote 100.0 2E-44 4.4E-49 360.8 19.6 248 409-672 10-265 (429)
9 KOG1094 Discoidin domain recep 100.0 1.5E-43 3.2E-48 366.0 23.8 264 407-680 536-805 (807)
10 KOG0591 NIMA (never in mitosis 100.0 3.2E-45 6.9E-50 348.3 9.7 262 410-678 20-284 (375)
11 KOG1095 Protein tyrosine kinas 100.0 2.8E-44 6E-49 404.9 19.0 265 412-688 695-970 (1025)
12 KOG0575 Polo-like serine/threo 100.0 2.7E-43 5.9E-48 369.5 21.1 254 409-680 18-274 (592)
13 KOG0615 Serine/threonine prote 100.0 5.6E-44 1.2E-48 356.9 14.2 255 409-679 172-441 (475)
14 KOG4721 Serine/threonine prote 100.0 4E-44 8.6E-49 368.6 12.6 254 396-682 118-371 (904)
15 KOG0193 Serine/threonine prote 100.0 1.2E-43 2.6E-48 370.1 13.9 259 407-682 390-656 (678)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.2E-42 4.8E-47 367.4 21.9 264 408-681 6-336 (338)
17 KOG0194 Protein tyrosine kinas 100.0 1.2E-42 2.5E-47 367.6 16.9 254 414-682 162-423 (474)
18 KOG0198 MEKK and related serin 100.0 2.2E-42 4.7E-47 350.5 17.6 258 411-680 19-281 (313)
19 KOG0598 Ribosomal protein S6 k 100.0 2.7E-42 5.8E-47 343.0 16.7 242 409-667 25-269 (357)
20 KOG0600 Cdc2-related protein k 100.0 3.1E-42 6.7E-47 352.6 17.1 261 409-678 117-403 (560)
21 PHA02988 hypothetical protein; 100.0 3.9E-41 8.5E-46 348.3 23.4 249 414-680 25-280 (283)
22 KOG0593 Predicted protein kina 100.0 2.5E-42 5.4E-47 331.8 13.1 254 410-676 3-285 (396)
23 KOG4278 Protein tyrosine kinas 100.0 4.9E-42 1.1E-46 355.7 14.3 260 404-679 262-523 (1157)
24 KOG0582 Ste20-like serine/thre 100.0 1.2E-40 2.5E-45 336.2 21.8 261 409-678 26-296 (516)
25 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-40 2.6E-45 341.8 22.2 255 409-678 5-264 (266)
26 cd05096 PTKc_DDR1 Catalytic do 100.0 2E-40 4.3E-45 347.0 23.9 262 409-678 5-304 (304)
27 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-40 2.6E-45 358.4 22.1 260 408-678 34-373 (375)
28 KOG0659 Cdk activating kinase 100.0 1E-40 2.2E-45 315.8 17.9 261 409-681 2-287 (318)
29 cd05106 PTKc_CSF-1R Catalytic 100.0 2.2E-40 4.7E-45 356.2 22.1 261 408-679 37-372 (374)
30 cd05108 PTKc_EGFR Catalytic do 100.0 2.7E-40 5.9E-45 347.9 22.2 260 409-684 7-273 (316)
31 cd05111 PTK_HER3 Pseudokinase 100.0 4.1E-40 9E-45 340.2 23.0 262 410-687 8-276 (279)
32 PF07714 Pkinase_Tyr: Protein 100.0 5.7E-41 1.2E-45 342.6 15.9 249 414-676 4-259 (259)
33 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.1E-40 1.1E-44 335.0 22.8 251 409-676 4-255 (256)
34 KOG0578 p21-activated serine/t 100.0 6.9E-41 1.5E-45 348.7 16.0 251 408-676 272-524 (550)
35 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-39 2.7E-44 334.0 24.1 256 409-679 4-265 (266)
36 cd05631 STKc_GRK4 Catalytic do 100.0 5.7E-40 1.2E-44 340.2 21.4 254 411-677 2-263 (285)
37 KOG3653 Transforming growth fa 100.0 2.7E-39 6E-44 328.4 25.3 258 414-681 215-505 (534)
38 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-39 2.4E-44 337.5 23.1 258 409-678 5-282 (283)
39 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-39 2.5E-44 333.3 22.6 254 409-678 6-260 (261)
40 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-39 2.9E-44 344.8 23.8 261 409-682 5-308 (331)
41 KOG0661 MAPK related serine/th 100.0 4.2E-41 9.1E-46 341.9 10.9 257 408-676 9-292 (538)
42 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-39 2.7E-44 351.7 23.2 263 408-681 36-399 (400)
43 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-39 3.9E-44 332.3 23.1 254 410-679 7-262 (263)
44 cd05068 PTKc_Frk_like Catalyti 100.0 1.7E-39 3.8E-44 332.0 22.6 255 408-678 5-260 (261)
45 KOG0663 Protein kinase PITSLRE 100.0 3E-40 6.5E-45 321.6 15.4 260 410-679 77-365 (419)
46 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-39 2.9E-44 345.3 21.7 263 409-681 7-335 (337)
47 KOG0592 3-phosphoinositide-dep 100.0 3.8E-40 8.3E-45 340.0 16.4 253 407-676 71-339 (604)
48 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.8E-39 6.1E-44 329.6 22.0 251 410-677 5-256 (256)
49 cd05062 PTKc_IGF-1R Catalytic 100.0 2.8E-39 6E-44 333.6 22.2 260 407-678 4-277 (277)
50 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.2E-39 9.1E-44 333.3 23.2 259 412-680 7-282 (283)
51 KOG0597 Serine-threonine prote 100.0 5.3E-40 1.1E-44 338.6 16.0 249 409-676 2-252 (808)
52 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-39 1E-43 334.5 23.3 265 410-687 6-290 (291)
53 KOG0616 cAMP-dependent protein 100.0 1E-39 2.2E-44 313.5 16.6 237 409-666 44-283 (355)
54 cd05059 PTKc_Tec_like Catalyti 100.0 3.7E-39 8.1E-44 328.6 21.9 250 410-676 5-255 (256)
55 cd05109 PTKc_HER2 Catalytic do 100.0 5.7E-39 1.2E-43 331.6 23.1 262 409-686 7-275 (279)
56 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.7E-39 1.5E-43 332.0 23.2 262 409-679 4-283 (284)
57 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.2E-39 4.8E-44 331.1 19.3 256 407-678 4-260 (261)
58 cd05085 PTKc_Fer Catalytic dom 100.0 7.4E-39 1.6E-43 325.0 22.9 248 415-677 1-249 (250)
59 cd05084 PTKc_Fes Catalytic dom 100.0 7E-39 1.5E-43 325.7 22.6 249 415-678 1-252 (252)
60 cd05053 PTKc_FGFR Catalytic do 100.0 5.6E-39 1.2E-43 334.1 22.3 261 407-679 10-291 (293)
61 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-39 2.7E-44 338.7 17.3 248 410-678 2-257 (291)
62 cd05043 PTK_Ryk Pseudokinase d 100.0 7.9E-39 1.7E-43 330.7 23.2 262 408-680 5-277 (280)
63 KOG4257 Focal adhesion tyrosin 100.0 6.6E-40 1.4E-44 340.7 14.7 254 410-679 390-649 (974)
64 cd05571 STKc_PKB Catalytic dom 100.0 2.6E-39 5.7E-44 341.4 19.1 245 415-677 1-253 (323)
65 cd05049 PTKc_Trk Catalytic dom 100.0 7.7E-39 1.7E-43 330.7 21.9 257 409-677 5-279 (280)
66 PLN00034 mitogen-activated pro 100.0 3.2E-39 7E-44 345.1 19.5 252 411-680 76-333 (353)
67 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-39 8.2E-44 334.4 19.5 256 409-676 1-285 (287)
68 cd05093 PTKc_TrkB Catalytic do 100.0 1E-38 2.3E-43 331.3 22.8 266 409-687 5-287 (288)
69 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.6E-39 2.1E-43 329.6 22.4 258 408-677 5-276 (277)
70 PTZ00263 protein kinase A cata 100.0 2.3E-39 4.9E-44 342.7 18.1 248 409-677 18-273 (329)
71 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-38 2.3E-43 330.3 22.6 257 410-678 6-282 (283)
72 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.2E-39 9.1E-44 341.4 19.5 254 410-678 2-260 (333)
73 KOG0583 Serine/threonine prote 100.0 8.1E-39 1.7E-43 337.9 21.5 254 408-680 16-280 (370)
74 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-38 2.8E-43 325.4 22.4 253 409-678 6-259 (260)
75 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-38 2.8E-43 330.9 22.8 259 411-681 2-288 (290)
76 cd05115 PTKc_Zap-70 Catalytic 100.0 2.1E-38 4.6E-43 323.3 23.5 248 416-679 2-255 (257)
77 KOG0201 Serine/threonine prote 100.0 1.9E-40 4.1E-45 334.8 8.2 249 410-675 14-263 (467)
78 cd05608 STKc_GRK1 Catalytic do 100.0 8.3E-39 1.8E-43 330.6 20.6 250 417-676 1-258 (280)
79 KOG0585 Ca2+/calmodulin-depend 100.0 3.5E-39 7.5E-44 327.4 17.1 263 407-682 95-379 (576)
80 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-38 2.4E-43 333.6 21.5 260 409-680 5-293 (303)
81 cd05067 PTKc_Lck_Blk Catalytic 100.0 2E-38 4.4E-43 324.0 22.8 253 409-678 6-259 (260)
82 KOG0605 NDR and related serine 100.0 5.4E-39 1.2E-43 332.0 18.5 256 407-676 139-446 (550)
83 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-38 4E-43 336.2 23.2 259 409-680 5-304 (333)
84 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-38 2.2E-43 344.5 21.5 260 409-679 37-399 (401)
85 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.5E-38 5.4E-43 324.7 23.4 256 409-679 5-267 (268)
86 cd05071 PTKc_Src Catalytic dom 100.0 2.2E-38 4.7E-43 324.2 22.9 254 409-679 6-260 (262)
87 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-38 3.4E-43 329.0 21.6 255 411-677 7-281 (283)
88 cd08228 STKc_Nek6 Catalytic do 100.0 2.4E-38 5.2E-43 324.6 22.7 261 409-680 2-266 (267)
89 cd05585 STKc_YPK1_like Catalyt 100.0 8.8E-39 1.9E-43 335.7 19.9 242 417-676 1-248 (312)
90 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-38 3.4E-43 332.5 21.6 264 409-686 7-287 (303)
91 cd05089 PTKc_Tie1 Catalytic do 100.0 2E-38 4.4E-43 330.6 22.3 259 409-681 2-277 (297)
92 cd05069 PTKc_Yes Catalytic dom 100.0 2.9E-38 6.4E-43 322.8 22.9 253 409-678 6-259 (260)
93 KOG1025 Epidermal growth facto 100.0 1.7E-39 3.6E-44 347.2 14.1 259 413-687 700-965 (1177)
94 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.9E-38 6.3E-43 327.3 22.8 262 410-679 5-283 (284)
95 cd05595 STKc_PKB_beta Catalyti 100.0 8.1E-39 1.7E-43 337.6 18.9 244 415-676 1-252 (323)
96 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.2E-38 9.1E-43 323.3 23.7 254 416-677 2-268 (269)
97 cd07862 STKc_CDK6 Catalytic do 100.0 2.1E-38 4.6E-43 329.3 21.5 257 410-676 2-288 (290)
98 cd05116 PTKc_Syk Catalytic dom 100.0 4.2E-38 9.2E-43 321.0 23.3 246 416-678 2-254 (257)
99 cd05098 PTKc_FGFR1 Catalytic d 100.0 2E-38 4.2E-43 332.4 21.3 262 409-682 18-302 (307)
100 PTZ00426 cAMP-dependent protei 100.0 5.9E-39 1.3E-43 340.4 17.5 249 409-678 30-287 (340)
101 PTZ00283 serine/threonine prot 100.0 1.2E-38 2.6E-43 353.4 20.7 263 403-675 26-297 (496)
102 PTZ00267 NIMA-related protein 100.0 1.5E-38 3.2E-43 352.5 21.3 252 411-675 69-323 (478)
103 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-38 4.3E-43 329.2 20.9 256 409-676 5-286 (288)
104 cd05593 STKc_PKB_gamma Catalyt 100.0 1.2E-38 2.6E-43 336.9 19.5 245 415-677 1-253 (328)
105 cd05035 PTKc_Axl_like Catalyti 100.0 6E-38 1.3E-42 322.5 24.2 259 411-679 1-272 (273)
106 cd05075 PTKc_Axl Catalytic dom 100.0 5.3E-38 1.2E-42 322.9 23.7 258 412-679 2-271 (272)
107 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-38 6E-43 328.1 21.8 261 407-679 4-278 (288)
108 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.4E-38 5.3E-43 336.8 21.8 262 409-680 7-340 (343)
109 cd05032 PTKc_InsR_like Catalyt 100.0 2.7E-38 5.8E-43 326.1 21.5 257 409-677 6-276 (277)
110 KOG0658 Glycogen synthase kina 100.0 1.9E-39 4.2E-44 321.9 12.1 253 411-676 26-307 (364)
111 KOG0580 Serine/threonine prote 100.0 5.5E-39 1.2E-43 299.9 14.2 254 409-680 22-278 (281)
112 cd05066 PTKc_EphR_A Catalytic 100.0 5.6E-38 1.2E-42 322.1 23.2 256 409-679 4-266 (267)
113 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.9E-38 8.5E-43 329.6 22.4 262 409-682 15-299 (304)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.6E-38 2.1E-42 319.9 24.6 261 409-680 2-266 (267)
115 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.4E-38 9.5E-43 325.5 22.2 262 410-679 5-283 (284)
116 cd05055 PTKc_PDGFR Catalytic d 100.0 5.5E-38 1.2E-42 328.1 22.7 258 409-679 35-301 (302)
117 cd05097 PTKc_DDR_like Catalyti 100.0 6E-38 1.3E-42 326.8 22.9 262 409-678 5-295 (295)
118 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-38 3.8E-43 336.6 19.1 255 410-677 1-269 (332)
119 cd05051 PTKc_DDR Catalytic dom 100.0 6.3E-38 1.4E-42 326.6 22.9 262 408-677 4-295 (296)
120 cd05605 STKc_GRK4_like Catalyt 100.0 3.4E-38 7.4E-43 326.9 20.8 257 410-679 1-265 (285)
121 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-38 2.8E-43 342.0 18.1 255 407-677 41-306 (370)
122 cd05058 PTKc_Met_Ron Catalytic 100.0 9E-38 2E-42 319.4 23.4 251 415-679 1-259 (262)
123 cd05047 PTKc_Tie Catalytic dom 100.0 8.8E-38 1.9E-42 321.2 23.3 251 415-679 1-268 (270)
124 cd05607 STKc_GRK7 Catalytic do 100.0 5.9E-38 1.3E-42 323.7 21.9 248 417-676 1-251 (277)
125 cd05095 PTKc_DDR2 Catalytic do 100.0 8.9E-38 1.9E-42 325.6 23.4 262 409-678 5-296 (296)
126 KOG1024 Receptor-like protein 100.0 2E-38 4.3E-43 314.0 17.4 270 399-679 274-555 (563)
127 cd05065 PTKc_EphR_B Catalytic 100.0 7.5E-38 1.6E-42 321.4 22.3 255 410-679 5-268 (269)
128 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-38 5.3E-43 339.5 19.5 260 403-678 37-307 (370)
129 cd05112 PTKc_Itk Catalytic dom 100.0 6.2E-38 1.3E-42 319.5 21.4 251 410-677 5-256 (256)
130 cd08529 STKc_FA2-like Catalyti 100.0 9.9E-38 2.2E-42 317.7 22.8 251 410-675 1-253 (256)
131 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-37 2.6E-42 317.6 23.3 249 415-680 1-256 (257)
132 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.8E-38 1E-42 334.1 21.1 259 410-678 1-293 (338)
133 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.5E-38 3.2E-43 339.8 17.2 253 409-677 1-287 (350)
134 KOG0588 Serine/threonine prote 100.0 1.6E-38 3.4E-43 334.4 16.9 246 413-679 16-267 (786)
135 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.2E-37 2.7E-42 327.4 23.8 260 409-680 12-294 (314)
136 cd05584 STKc_p70S6K Catalytic 100.0 4E-38 8.7E-43 332.3 20.2 245 415-677 2-258 (323)
137 cd05050 PTKc_Musk Catalytic do 100.0 8.4E-38 1.8E-42 324.5 22.2 258 408-677 4-287 (288)
138 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-38 2.9E-43 337.2 16.5 254 409-677 1-265 (330)
139 cd05034 PTKc_Src_like Catalyti 100.0 8.7E-38 1.9E-42 319.3 21.9 255 408-678 5-260 (261)
140 cd05082 PTKc_Csk Catalytic dom 100.0 1.2E-37 2.6E-42 317.4 22.7 249 409-678 6-255 (256)
141 cd05042 PTKc_Aatyk Catalytic d 100.0 1.2E-37 2.6E-42 319.9 22.7 254 416-677 2-268 (269)
142 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-37 3.6E-42 320.7 23.8 263 409-687 7-276 (279)
143 cd08229 STKc_Nek7 Catalytic do 100.0 9.3E-38 2E-42 320.2 21.7 260 410-679 3-265 (267)
144 KOG0589 Serine/threonine prote 100.0 1.2E-38 2.6E-43 330.8 14.8 253 409-675 4-258 (426)
145 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-37 3.4E-42 319.2 22.6 256 409-680 6-266 (270)
146 cd05073 PTKc_Hck Catalytic dom 100.0 1.7E-37 3.8E-42 317.1 22.8 253 409-678 6-259 (260)
147 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.3E-37 4.9E-42 317.8 23.7 254 416-677 2-267 (268)
148 cd05594 STKc_PKB_alpha Catalyt 100.0 2.8E-38 6.1E-43 333.9 17.4 245 415-677 1-254 (325)
149 cd05110 PTKc_HER4 Catalytic do 100.0 9.2E-38 2E-42 326.7 21.2 258 409-682 7-271 (303)
150 cd06625 STKc_MEKK3_like Cataly 100.0 1.7E-37 3.7E-42 317.4 22.7 254 409-677 2-262 (263)
151 cd05626 STKc_LATS2 Catalytic d 100.0 7.4E-38 1.6E-42 337.9 21.0 253 410-677 2-307 (381)
152 cd05039 PTKc_Csk_like Catalyti 100.0 2E-37 4.3E-42 315.8 23.0 249 409-678 6-255 (256)
153 cd05628 STKc_NDR1 Catalytic do 100.0 8.3E-38 1.8E-42 335.4 20.7 253 409-676 1-294 (363)
154 cd06637 STKc_TNIK Catalytic do 100.0 8.5E-38 1.8E-42 321.4 20.0 257 406-676 3-270 (272)
155 PTZ00036 glycogen synthase kin 100.0 3.7E-38 8E-43 345.4 18.2 259 407-678 64-354 (440)
156 PHA03212 serine/threonine kina 100.0 1.5E-37 3.2E-42 335.3 22.6 253 408-679 91-380 (391)
157 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-37 3.9E-42 320.7 22.2 256 409-677 5-279 (280)
158 cd05589 STKc_PKN Catalytic dom 100.0 7.8E-38 1.7E-42 330.3 19.8 247 411-676 1-258 (324)
159 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-37 3.6E-42 320.7 21.8 252 410-679 2-257 (279)
160 cd05592 STKc_nPKC_theta_delta 100.0 9.3E-38 2E-42 328.4 20.1 243 415-675 1-248 (316)
161 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.7E-37 3.7E-42 329.3 22.2 260 409-680 12-294 (334)
162 cd05618 STKc_aPKC_iota Catalyt 100.0 5.6E-38 1.2E-42 331.9 18.3 248 415-676 1-263 (329)
163 cd06615 PKc_MEK Catalytic doma 100.0 2.8E-37 6.1E-42 323.7 23.5 259 409-681 1-293 (308)
164 cd05599 STKc_NDR_like Catalyti 100.0 5.1E-38 1.1E-42 337.4 18.2 253 409-677 1-298 (364)
165 cd07853 STKc_NLK Catalytic dom 100.0 6.5E-38 1.4E-42 337.4 19.0 260 410-679 1-292 (372)
166 cd05044 PTKc_c-ros Catalytic d 100.0 1.8E-37 3.9E-42 318.5 21.3 252 415-678 1-269 (269)
167 cd05040 PTKc_Ack_like Catalyti 100.0 2.9E-37 6.2E-42 314.7 22.6 249 415-677 1-256 (257)
168 cd05590 STKc_nPKC_eta Catalyti 100.0 7.2E-38 1.6E-42 329.9 18.7 244 415-676 1-254 (320)
169 cd05041 PTKc_Fes_like Catalyti 100.0 3.9E-37 8.5E-42 312.6 23.4 248 415-677 1-250 (251)
170 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-37 2.6E-42 321.4 19.8 251 410-678 5-256 (277)
171 cd05591 STKc_nPKC_epsilon Cata 100.0 9.7E-38 2.1E-42 329.2 19.4 245 415-677 1-256 (321)
172 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3E-37 6.4E-42 320.2 22.6 262 409-678 1-269 (287)
173 cd06646 STKc_MAP4K5 Catalytic 100.0 1.6E-37 3.5E-42 318.5 20.1 251 409-676 9-266 (267)
174 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-37 2.9E-42 328.6 19.8 248 410-675 1-257 (324)
175 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.6E-37 5.6E-42 320.1 21.7 257 409-679 5-270 (284)
176 cd05588 STKc_aPKC Catalytic do 100.0 9.3E-38 2E-42 330.3 18.6 250 415-678 1-265 (329)
177 cd06654 STKc_PAK1 Catalytic do 100.0 3.3E-37 7.2E-42 321.3 22.5 254 409-679 20-274 (296)
178 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-37 3.5E-42 321.9 19.9 268 399-677 8-285 (286)
179 cd05616 STKc_cPKC_beta Catalyt 100.0 1.8E-37 3.8E-42 327.5 20.5 248 410-675 1-257 (323)
180 cd08217 STKc_Nek2 Catalytic do 100.0 3.9E-37 8.5E-42 314.7 22.5 260 410-675 1-262 (265)
181 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-37 3.3E-42 326.7 19.9 243 415-675 1-248 (316)
182 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-37 2.4E-42 334.7 19.2 261 402-678 36-307 (371)
183 cd00192 PTKc Catalytic domain 100.0 5.2E-37 1.1E-41 313.0 23.2 251 415-677 1-262 (262)
184 KOG2052 Activin A type IB rece 100.0 1.2E-37 2.5E-42 314.3 17.8 263 409-681 211-505 (513)
185 cd06624 STKc_ASK Catalytic dom 100.0 3.2E-37 7E-42 316.5 21.5 260 404-676 3-266 (268)
186 cd06651 STKc_MEKK3 Catalytic d 100.0 6.7E-37 1.5E-41 313.9 23.8 253 410-676 3-262 (266)
187 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-37 2.3E-42 336.3 18.9 254 409-678 1-308 (377)
188 KOG2345 Serine/threonine prote 100.0 3.8E-38 8.1E-43 295.5 13.2 265 408-679 20-300 (302)
189 cd05046 PTK_CCK4 Pseudokinase 100.0 3.7E-37 8E-42 317.3 21.7 258 409-677 5-274 (275)
190 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-37 3.6E-42 326.5 19.4 244 415-676 1-249 (316)
191 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-37 3.4E-42 327.1 19.2 244 415-676 1-253 (318)
192 KOG0694 Serine/threonine prote 100.0 8.2E-38 1.8E-42 331.9 16.9 242 408-669 367-613 (694)
193 cd05582 STKc_RSK_N N-terminal 100.0 5.1E-38 1.1E-42 330.9 15.4 243 415-675 2-254 (318)
194 PRK13184 pknD serine/threonine 100.0 2.3E-37 5E-42 351.9 21.8 263 409-681 2-292 (932)
195 KOG1989 ARK protein kinase fam 100.0 8.5E-38 1.9E-42 342.3 17.6 260 409-682 37-314 (738)
196 cd07876 STKc_JNK2 Catalytic do 100.0 3.3E-37 7E-42 330.4 21.8 257 408-678 20-318 (359)
197 KOG0199 ACK and related non-re 100.0 5.3E-38 1.1E-42 330.5 15.2 256 414-684 115-379 (1039)
198 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-37 3.8E-42 308.8 18.1 259 410-675 12-302 (323)
199 cd08219 STKc_Nek3 Catalytic do 100.0 4.3E-37 9.3E-42 313.1 21.4 251 410-675 1-252 (255)
200 cd05632 STKc_GRK5 Catalytic do 100.0 4.9E-37 1.1E-41 318.3 22.0 252 411-675 2-261 (285)
201 cd06639 STKc_myosinIIIB Cataly 100.0 3.9E-37 8.5E-42 319.9 21.3 267 398-676 11-288 (291)
202 cd06609 STKc_MST3_like Catalyt 100.0 5.2E-37 1.1E-41 316.1 21.5 253 410-680 2-256 (274)
203 cd08528 STKc_Nek10 Catalytic d 100.0 9.1E-37 2E-41 313.3 23.1 255 410-677 1-268 (269)
204 cd05630 STKc_GRK6 Catalytic do 100.0 4.1E-37 8.9E-42 318.8 20.4 256 411-679 2-265 (285)
205 PTZ00266 NIMA-related protein 100.0 4.5E-37 9.7E-42 350.8 22.5 263 408-677 12-297 (1021)
206 cd05625 STKc_LATS1 Catalytic d 100.0 2.4E-37 5.3E-42 334.2 19.3 251 410-676 2-306 (382)
207 cd07874 STKc_JNK3 Catalytic do 100.0 3.7E-37 8E-42 329.6 20.4 258 407-678 15-314 (355)
208 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-36 2.4E-41 314.2 23.2 252 410-679 5-257 (277)
209 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-37 9.5E-42 325.5 20.5 255 409-677 1-268 (331)
210 cd05575 STKc_SGK Catalytic dom 100.0 2.5E-37 5.4E-42 326.3 18.5 243 415-675 1-251 (323)
211 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.9E-37 1.3E-41 315.7 20.8 239 416-677 2-274 (274)
212 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.6E-37 7.7E-42 323.2 19.3 260 409-680 6-291 (309)
213 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.6E-36 3.4E-41 310.4 23.3 239 415-676 1-261 (262)
214 KOG0584 Serine/threonine prote 100.0 6.7E-38 1.5E-42 329.4 13.4 247 415-676 46-297 (632)
215 cd05615 STKc_cPKC_alpha Cataly 100.0 5.1E-37 1.1E-41 323.9 20.2 242 410-669 1-246 (323)
216 KOG0611 Predicted serine/threo 100.0 9E-38 2E-42 310.1 13.4 248 409-677 53-305 (668)
217 cd06612 STKc_MST1_2 Catalytic 100.0 8.9E-37 1.9E-41 310.7 21.2 250 409-675 3-253 (256)
218 cd05083 PTKc_Chk Catalytic dom 100.0 9E-37 2E-41 310.6 21.1 247 409-678 6-253 (254)
219 cd05603 STKc_SGK2 Catalytic do 100.0 2.4E-37 5.3E-42 326.2 17.4 243 415-675 1-251 (321)
220 KOG0660 Mitogen-activated prot 100.0 1.1E-37 2.3E-42 308.9 13.7 260 409-678 22-313 (359)
221 cd05624 STKc_MRCK_beta Catalyt 100.0 4.5E-37 9.7E-42 325.4 19.4 255 409-677 1-268 (331)
222 cd05598 STKc_LATS Catalytic do 100.0 2E-37 4.4E-42 334.2 16.7 252 410-677 2-303 (376)
223 smart00219 TyrKc Tyrosine kina 100.0 2E-36 4.4E-41 308.2 23.0 251 412-676 2-258 (258)
224 cd05623 STKc_MRCK_alpha Cataly 100.0 7.2E-37 1.6E-41 324.1 20.3 254 409-676 1-267 (332)
225 KOG0200 Fibroblast/platelet-de 100.0 5.4E-37 1.2E-41 346.4 20.4 257 412-679 299-579 (609)
226 cd06605 PKc_MAPKK Catalytic do 100.0 7.2E-37 1.6E-41 313.2 19.6 255 410-678 2-260 (265)
227 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-36 3.2E-41 314.1 22.1 252 411-678 7-265 (282)
228 cd05602 STKc_SGK1 Catalytic do 100.0 4.3E-37 9.4E-42 324.8 18.4 242 415-674 1-246 (325)
229 cd06652 STKc_MEKK2 Catalytic d 100.0 2.7E-36 5.9E-41 309.1 23.6 254 409-676 2-262 (265)
230 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.6E-37 1.4E-41 323.6 19.4 248 415-676 1-261 (327)
231 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-36 3.1E-41 314.3 21.4 257 409-679 1-265 (283)
232 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-36 2.4E-41 327.0 21.3 257 408-678 23-321 (364)
233 cd08223 STKc_Nek4 Catalytic do 100.0 2.3E-36 4.9E-41 308.0 22.5 252 410-675 1-254 (257)
234 cd08221 STKc_Nek9 Catalytic do 100.0 2.8E-36 6.1E-41 307.2 23.0 252 410-676 1-254 (256)
235 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.6E-36 3.5E-41 312.0 21.3 255 411-676 3-270 (272)
236 cd05604 STKc_SGK3 Catalytic do 100.0 4E-37 8.6E-42 325.1 17.1 239 415-671 1-243 (325)
237 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.2E-36 7E-41 309.8 23.5 259 411-679 1-272 (273)
238 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-36 3.3E-41 316.3 21.2 252 409-678 19-272 (296)
239 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-36 2.8E-41 315.5 20.6 257 410-676 1-286 (288)
240 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.7E-37 1.2E-41 312.9 17.6 239 415-676 1-257 (258)
241 cd05627 STKc_NDR2 Catalytic do 100.0 5E-37 1.1E-41 329.0 17.8 253 409-677 1-295 (360)
242 KOG0033 Ca2+/calmodulin-depend 100.0 1.6E-38 3.5E-43 296.8 5.1 255 409-680 11-272 (355)
243 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-36 5.8E-41 307.4 21.9 251 410-675 1-253 (256)
244 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.8E-36 6E-41 309.3 22.0 249 411-675 2-264 (267)
245 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-36 6.3E-41 308.8 22.0 255 409-675 1-264 (267)
246 cd06631 STKc_YSK4 Catalytic do 100.0 2.4E-36 5.3E-41 309.4 21.3 251 410-675 1-262 (265)
247 cd06632 STKc_MEKK1_plant Catal 100.0 2.7E-36 5.8E-41 307.5 21.4 249 410-675 1-255 (258)
248 PF00069 Pkinase: Protein kina 100.0 7.4E-37 1.6E-41 311.9 16.8 254 411-677 1-259 (260)
249 cd06613 STKc_MAP4K3_like Catal 100.0 4.5E-36 9.8E-41 306.6 22.5 254 409-675 3-260 (262)
250 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-36 5.1E-41 319.6 21.0 256 414-678 3-310 (327)
251 cd06656 STKc_PAK3 Catalytic do 100.0 2E-36 4.3E-41 315.6 20.2 254 409-679 19-273 (297)
252 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.1E-36 6.8E-41 312.3 21.5 256 410-678 2-265 (286)
253 cd07868 STKc_CDK8 Catalytic do 100.0 3.5E-36 7.6E-41 316.8 22.2 254 414-676 6-315 (317)
254 cd06641 STKc_MST3 Catalytic do 100.0 4.4E-36 9.5E-41 309.8 22.4 251 410-678 5-256 (277)
255 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-36 7E-41 307.1 21.0 238 415-677 1-259 (259)
256 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-36 4.6E-41 310.2 19.7 252 409-675 9-265 (267)
257 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.6E-36 5.6E-41 312.3 20.5 263 399-675 6-279 (282)
258 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-36 3.1E-41 317.3 18.6 259 409-679 6-290 (301)
259 cd06608 STKc_myosinIII_like Ca 100.0 3.3E-36 7E-41 309.8 20.7 258 407-676 4-273 (275)
260 PHA03211 serine/threonine kina 100.0 1.2E-36 2.5E-41 332.4 18.3 252 408-677 168-457 (461)
261 KOG4279 Serine/threonine prote 100.0 2.8E-37 6.1E-42 324.1 12.1 245 416-675 582-832 (1226)
262 cd06611 STKc_SLK_like Catalyti 100.0 4E-36 8.8E-41 310.5 20.7 256 409-680 5-267 (280)
263 cd06644 STKc_STK10_LOK Catalyt 100.0 7.9E-36 1.7E-40 310.3 23.0 254 409-678 12-272 (292)
264 cd07867 STKc_CDC2L6 Catalytic 100.0 2.8E-36 6E-41 317.5 19.7 254 414-676 6-315 (317)
265 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-36 5.2E-41 314.1 18.8 252 413-681 26-278 (292)
266 cd07844 STKc_PCTAIRE_like Cata 100.0 5.2E-36 1.1E-40 311.5 21.3 256 409-676 5-289 (291)
267 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-36 4.2E-41 313.8 17.9 255 409-675 1-283 (286)
268 cd07861 STKc_CDK1_euk Catalyti 100.0 3.7E-36 8.1E-41 311.4 20.1 256 410-675 1-282 (285)
269 cd06626 STKc_MEKK4 Catalytic d 100.0 8.4E-36 1.8E-40 305.0 22.4 251 410-675 1-261 (264)
270 cd06623 PKc_MAPKK_plant_like C 100.0 8E-36 1.7E-40 305.0 21.9 254 410-677 2-258 (264)
271 PTZ00284 protein kinase; Provi 100.0 3.8E-36 8.2E-41 333.1 21.0 261 402-679 122-442 (467)
272 cd06917 STKc_NAK1_like Catalyt 100.0 7.6E-36 1.6E-40 307.9 21.9 253 410-680 2-260 (277)
273 cd08220 STKc_Nek8 Catalytic do 100.0 8.7E-36 1.9E-40 303.4 21.9 250 410-675 1-253 (256)
274 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.1E-36 1.8E-40 310.0 21.7 257 407-675 3-288 (291)
275 KOG0032 Ca2+/calmodulin-depend 100.0 7E-36 1.5E-40 315.2 21.3 256 408-681 34-299 (382)
276 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-35 3.6E-40 310.2 23.9 252 409-680 15-272 (307)
277 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-36 7.3E-41 320.6 18.7 258 406-679 12-302 (343)
278 cd06616 PKc_MKK4 Catalytic dom 100.0 4.7E-36 1E-40 311.3 19.4 256 410-678 5-270 (288)
279 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-35 2.5E-40 307.8 22.2 256 409-676 1-284 (286)
280 cd07832 STKc_CCRK Catalytic do 100.0 6.4E-36 1.4E-40 309.7 20.1 256 410-676 1-283 (286)
281 cd06659 STKc_PAK6 Catalytic do 100.0 4.9E-36 1.1E-40 312.6 19.3 253 414-683 26-279 (297)
282 cd06648 STKc_PAK_II Catalytic 100.0 8.8E-36 1.9E-40 308.8 20.7 254 410-680 20-274 (285)
283 KOG0599 Phosphorylase kinase g 100.0 1.4E-36 3.1E-41 287.8 13.3 255 409-678 17-286 (411)
284 cd05609 STKc_MAST Catalytic do 100.0 9.6E-36 2.1E-40 311.7 21.0 253 409-676 1-274 (305)
285 PHA03209 serine/threonine kina 100.0 1E-35 2.2E-40 318.2 21.5 252 407-678 64-354 (357)
286 cd05574 STKc_phototropin_like 100.0 1.1E-35 2.3E-40 313.0 21.3 255 410-677 2-291 (316)
287 KOG0577 Serine/threonine prote 100.0 1E-36 2.3E-41 315.2 12.7 257 410-686 27-289 (948)
288 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-36 5.7E-41 319.6 16.1 243 417-677 1-255 (330)
289 cd07839 STKc_CDK5 Catalytic do 100.0 3.4E-36 7.4E-41 311.6 16.3 255 410-676 1-282 (284)
290 cd07833 STKc_CDKL Catalytic do 100.0 6.5E-36 1.4E-40 310.1 17.9 255 410-675 2-285 (288)
291 cd06630 STKc_MEKK1 Catalytic d 100.0 2.1E-35 4.5E-40 302.9 21.5 255 410-676 1-265 (268)
292 PHA03207 serine/threonine kina 100.0 1E-35 2.2E-40 322.2 20.2 254 408-680 91-380 (392)
293 cd06635 STKc_TAO1 Catalytic do 100.0 4.8E-35 1E-39 308.1 24.5 254 411-684 27-286 (317)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 1.3E-35 2.9E-40 308.7 19.8 257 409-675 5-290 (293)
295 KOG0574 STE20-like serine/thre 100.0 9.1E-38 2E-42 299.3 3.1 249 411-676 35-284 (502)
296 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-35 4.2E-40 307.1 20.8 247 409-676 1-255 (290)
297 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-35 2.3E-40 307.9 18.7 255 410-675 1-281 (284)
298 cd06647 STKc_PAK_I Catalytic d 100.0 1.8E-35 3.9E-40 307.7 20.2 252 409-677 19-271 (293)
299 cd07841 STKc_CDK7 Catalytic do 100.0 1.6E-35 3.6E-40 308.8 19.9 258 410-679 1-286 (298)
300 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-35 4.5E-40 300.5 20.0 251 410-675 1-253 (256)
301 cd08225 STKc_Nek5 Catalytic do 100.0 1.8E-35 3.9E-40 301.3 19.5 252 410-676 1-255 (257)
302 cd05572 STKc_cGK_PKG Catalytic 100.0 3E-35 6.5E-40 300.8 21.0 247 417-678 1-255 (262)
303 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.5E-35 1.2E-39 299.3 22.9 253 409-675 2-261 (264)
304 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-35 7.5E-40 303.6 20.9 254 411-676 1-280 (282)
305 KOG0610 Putative serine/threon 100.0 1.9E-35 4.1E-40 296.4 18.0 252 411-675 79-392 (459)
306 cd07840 STKc_CDK9_like Catalyt 100.0 3.5E-35 7.6E-40 304.2 20.8 257 411-676 1-285 (287)
307 cd06614 STKc_PAK Catalytic dom 100.0 6.2E-35 1.3E-39 302.6 22.7 257 407-680 17-275 (286)
308 cd05578 STKc_Yank1 Catalytic d 100.0 1.3E-35 2.9E-40 302.6 17.4 249 410-674 1-254 (258)
309 cd07836 STKc_Pho85 Catalytic d 100.0 2.8E-35 6.1E-40 304.7 19.5 256 410-675 1-281 (284)
310 cd07852 STKc_MAPK15 Catalytic 100.0 3E-35 6.5E-40 312.5 20.1 258 408-676 6-296 (337)
311 cd06606 STKc_MAPKKK Catalytic 100.0 8.5E-35 1.8E-39 296.0 22.2 255 410-676 1-258 (260)
312 cd07845 STKc_CDK10 Catalytic d 100.0 5E-35 1.1E-39 306.9 20.7 261 409-679 7-294 (309)
313 cd07837 STKc_CdkB_plant Cataly 100.0 4.4E-35 9.6E-40 305.0 20.1 260 409-675 1-291 (295)
314 cd07835 STKc_CDK1_like Catalyt 100.0 3.5E-35 7.5E-40 303.9 18.7 254 411-675 1-280 (283)
315 cd07849 STKc_ERK1_2_like Catal 100.0 2.1E-35 4.6E-40 313.5 17.5 259 408-677 4-294 (336)
316 cd06618 PKc_MKK7 Catalytic dom 100.0 6.4E-35 1.4E-39 304.1 20.7 254 409-678 15-276 (296)
317 cd05122 PKc_STE Catalytic doma 100.0 1.4E-34 3.1E-39 293.1 22.7 248 410-675 1-251 (253)
318 cd07842 STKc_CDK8_like Catalyt 100.0 5.5E-35 1.2E-39 307.4 19.9 260 410-675 1-313 (316)
319 KOG0986 G protein-coupled rece 100.0 7.5E-36 1.6E-40 301.1 12.1 252 406-670 182-436 (591)
320 cd05633 STKc_GRK3 Catalytic do 100.0 1E-34 2.2E-39 299.9 20.9 247 416-679 1-259 (279)
321 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-34 2.3E-39 310.2 21.8 258 407-678 14-314 (353)
322 cd05577 STKc_GRK Catalytic dom 100.0 7.8E-35 1.7E-39 300.4 19.9 247 417-676 1-255 (277)
323 cd07864 STKc_CDK12 Catalytic d 100.0 8.3E-35 1.8E-39 304.0 20.0 259 407-675 5-299 (302)
324 cd08215 STKc_Nek Catalytic dom 100.0 2E-34 4.4E-39 293.2 21.9 253 410-675 1-255 (258)
325 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-34 4.1E-39 305.1 22.3 255 415-678 4-311 (328)
326 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-34 2.9E-39 300.8 20.3 253 410-675 1-268 (290)
327 cd06634 STKc_TAO2 Catalytic do 100.0 2.1E-34 4.5E-39 302.0 21.6 254 410-683 16-275 (308)
328 PHA02882 putative serine/threo 100.0 1.6E-34 3.6E-39 300.7 20.6 258 409-676 12-293 (294)
329 PLN00009 cyclin-dependent kina 100.0 1.6E-34 3.5E-39 300.8 20.3 260 409-679 2-288 (294)
330 PHA03390 pk1 serine/threonine- 100.0 3.2E-34 7E-39 294.1 22.0 250 403-676 8-263 (267)
331 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-34 3.6E-39 299.7 19.1 254 411-677 2-265 (288)
332 cd06657 STKc_PAK4 Catalytic do 100.0 3.3E-34 7.1E-39 298.0 20.6 247 415-678 26-273 (292)
333 cd06627 STKc_Cdc7_like Catalyt 100.0 5.8E-34 1.3E-38 289.4 21.9 249 410-675 1-251 (254)
334 KOG0667 Dual-specificity tyros 100.0 1.5E-34 3.2E-39 307.3 18.1 254 410-679 187-506 (586)
335 cd05118 STKc_CMGC Catalytic do 100.0 3E-34 6.4E-39 296.7 19.8 254 411-676 1-281 (283)
336 cd07830 STKc_MAK_like Catalyti 100.0 2.2E-34 4.8E-39 297.9 18.7 253 411-675 1-280 (283)
337 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-34 4.6E-39 294.4 18.1 242 417-675 1-257 (265)
338 cd07838 STKc_CDK4_6_like Catal 100.0 6.7E-34 1.5E-38 294.7 22.1 255 411-675 1-284 (287)
339 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-34 3.6E-39 307.3 17.9 252 408-675 14-297 (342)
340 cd05611 STKc_Rim15_like Cataly 100.0 4.4E-34 9.5E-39 291.8 20.1 244 415-678 2-254 (260)
341 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-34 6.9E-39 292.8 19.0 252 410-675 1-257 (260)
342 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-34 3.3E-39 306.7 17.2 261 409-679 5-298 (334)
343 KOG1035 eIF-2alpha kinase GCN2 100.0 6.8E-35 1.5E-39 325.3 14.8 256 406-675 476-871 (1351)
344 KOG0596 Dual specificity; seri 100.0 1.4E-34 3.1E-39 298.7 16.0 252 410-676 362-628 (677)
345 KOG0983 Mitogen-activated prot 100.0 5.2E-35 1.1E-39 277.4 11.8 245 414-676 97-350 (391)
346 cd08216 PK_STRAD Pseudokinase 100.0 6E-34 1.3E-38 299.4 21.2 255 415-679 8-299 (314)
347 KOG4717 Serine/threonine prote 100.0 2.1E-34 4.5E-39 293.8 16.8 251 411-679 20-274 (864)
348 cd05606 STKc_beta_ARK Catalyti 100.0 6.4E-34 1.4E-38 293.8 20.8 247 416-679 1-259 (278)
349 cd07865 STKc_CDK9 Catalytic do 100.0 7.7E-34 1.7E-38 297.8 21.7 258 409-676 12-308 (310)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.7E-34 6E-39 305.0 18.3 259 409-678 5-294 (337)
351 PHA03210 serine/threonine kina 100.0 1.1E-34 2.5E-39 322.6 16.0 266 407-680 146-459 (501)
352 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-33 2.8E-38 296.7 22.7 248 411-678 23-276 (313)
353 cd05581 STKc_PDK1 Catalytic do 100.0 3.3E-34 7.2E-39 295.7 17.8 250 409-675 1-277 (280)
354 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.3E-34 1.8E-38 302.2 20.3 265 400-679 8-304 (345)
355 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.6E-34 2.1E-38 299.5 20.6 259 404-678 5-291 (328)
356 cd07834 STKc_MAPK Catalytic do 100.0 4.6E-34 1E-38 302.5 17.7 260 410-679 1-293 (330)
357 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-33 2.5E-38 296.6 20.1 260 408-676 7-309 (311)
358 cd07829 STKc_CDK_like Catalyti 100.0 9.2E-34 2E-38 292.9 18.3 254 411-676 1-280 (282)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-33 3.1E-38 300.1 19.1 257 406-677 12-300 (343)
360 PTZ00024 cyclin-dependent prot 100.0 2.7E-33 5.9E-38 297.2 20.8 253 414-678 14-316 (335)
361 KOG1006 Mitogen-activated prot 100.0 1.3E-35 2.7E-40 280.7 2.2 248 414-675 69-327 (361)
362 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-33 4.1E-38 299.2 18.3 258 409-678 5-303 (342)
363 KOG4250 TANK binding protein k 100.0 7.8E-34 1.7E-38 302.4 14.3 199 414-620 18-226 (732)
364 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-33 9E-38 282.6 18.8 241 417-675 1-247 (250)
365 KOG0579 Ste20-like serine/thre 100.0 1.9E-34 4.2E-39 299.9 9.2 251 414-679 37-293 (1187)
366 cd07857 STKc_MPK1 Catalytic do 100.0 5E-33 1.1E-37 294.8 19.7 259 410-678 1-295 (332)
367 KOG0586 Serine/threonine prote 100.0 1.5E-33 3.3E-38 296.4 15.3 249 409-678 56-309 (596)
368 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-33 2.5E-38 300.9 13.9 256 407-677 13-300 (343)
369 KOG0666 Cyclin C-dependent kin 100.0 4.4E-34 9.5E-39 275.7 9.4 260 410-677 25-339 (438)
370 PLN03224 probable serine/threo 100.0 1.2E-32 2.7E-37 300.2 20.0 266 407-678 143-503 (507)
371 KOG0612 Rho-associated, coiled 100.0 1.5E-33 3.3E-38 312.1 12.5 259 402-676 68-339 (1317)
372 KOG4645 MAPKKK (MAP kinase kin 100.0 2.1E-34 4.6E-39 322.8 5.6 255 406-675 1232-1494(1509)
373 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-32 2.8E-37 315.6 20.4 146 409-565 4-152 (669)
374 cd05576 STKc_RPK118_like Catal 100.0 9.6E-33 2.1E-37 278.0 17.0 219 420-669 4-223 (237)
375 KOG1151 Tousled-like protein k 100.0 4.2E-33 9.1E-38 279.7 11.0 257 409-675 463-741 (775)
376 KOG0690 Serine/threonine prote 100.0 4E-33 8.7E-38 270.2 10.2 250 408-675 167-424 (516)
377 KOG0603 Ribosomal protein S6 k 100.0 8.5E-33 1.8E-37 292.4 13.2 248 407-682 320-571 (612)
378 KOG0604 MAP kinase-activated p 100.0 2E-32 4.3E-37 263.2 11.7 255 408-679 60-326 (400)
379 KOG0587 Traf2- and Nck-interac 100.0 6.4E-32 1.4E-36 292.9 17.0 264 400-676 10-283 (953)
380 smart00220 S_TKc Serine/Threon 100.0 2.6E-31 5.7E-36 267.2 19.2 239 421-675 1-241 (244)
381 PLN03225 Serine/threonine-prot 100.0 7.3E-32 1.6E-36 301.8 16.5 263 407-679 130-454 (566)
382 KOG0662 Cyclin-dependent kinas 100.0 3.2E-31 6.9E-36 236.7 13.2 255 410-676 3-284 (292)
383 KOG0607 MAP kinase-interacting 100.0 1.7E-31 3.7E-36 258.6 12.1 258 401-677 75-363 (463)
384 KOG4236 Serine/threonine prote 100.0 1.2E-31 2.5E-36 274.4 10.6 246 414-677 569-821 (888)
385 KOG0669 Cyclin T-dependent kin 100.0 1.9E-32 4.2E-37 257.0 3.1 263 411-682 19-322 (376)
386 KOG0696 Serine/threonine prote 100.0 2.2E-31 4.9E-36 265.3 10.5 240 410-667 350-593 (683)
387 KOG0671 LAMMER dual specificit 100.0 3.9E-31 8.4E-36 263.1 11.7 259 408-682 88-413 (415)
388 KOG0984 Mitogen-activated prot 100.0 2.7E-31 5.8E-36 242.7 9.6 200 414-622 51-256 (282)
389 KOG1027 Serine/threonine prote 100.0 9.5E-31 2.1E-35 282.6 10.2 247 411-675 511-767 (903)
390 KOG0608 Warts/lats-like serine 100.0 6.6E-30 1.4E-34 266.7 12.9 235 409-654 629-909 (1034)
391 KOG0614 cGMP-dependent protein 100.0 1.7E-30 3.6E-35 265.4 6.1 250 412-678 423-680 (732)
392 cd00180 PKc Catalytic domain o 100.0 6.3E-28 1.4E-32 236.5 21.4 212 417-676 1-215 (215)
393 PLN00113 leucine-rich repeat r 100.0 2.7E-28 5.7E-33 294.6 19.3 211 24-236 27-260 (968)
394 KOG0695 Serine/threonine prote 100.0 1.2E-28 2.6E-33 239.8 10.9 245 409-667 250-502 (593)
395 KOG0668 Casein kinase II, alph 100.0 1.7E-28 3.7E-33 227.5 11.1 252 409-678 38-325 (338)
396 KOG0664 Nemo-like MAPK-related 100.0 7.4E-30 1.6E-34 242.1 1.4 255 414-678 58-346 (449)
397 KOG0665 Jun-N-terminal kinase 99.9 3.5E-28 7.6E-33 236.6 10.1 254 409-677 17-312 (369)
398 smart00221 STYKc Protein kinas 99.9 7.1E-27 1.5E-31 232.4 18.4 200 411-620 1-202 (225)
399 KOG1152 Signal transduction se 99.9 2.1E-27 4.6E-32 246.4 8.7 197 409-619 561-770 (772)
400 KOG1290 Serine/threonine prote 99.9 5.8E-26 1.3E-30 232.0 17.5 133 409-550 78-221 (590)
401 KOG1345 Serine/threonine kinas 99.9 1.1E-26 2.3E-31 220.9 9.2 247 409-673 24-282 (378)
402 KOG0195 Integrin-linked kinase 99.9 6.8E-27 1.5E-31 222.0 7.6 247 415-679 196-446 (448)
403 smart00750 KIND kinase non-cat 99.9 8.2E-26 1.8E-30 216.4 14.6 167 493-681 1-171 (176)
404 PLN00181 protein SPA1-RELATED; 99.9 1.3E-26 2.7E-31 272.6 10.1 202 462-679 28-269 (793)
405 KOG0576 Mitogen-activated prot 99.9 5.4E-27 1.2E-31 247.4 5.2 252 409-675 15-271 (829)
406 KOG0670 U4/U6-associated splic 99.9 2.6E-26 5.7E-31 235.4 9.3 263 398-676 423-747 (752)
407 KOG1167 Serine/threonine prote 99.9 1.7E-24 3.6E-29 219.0 12.4 256 404-676 31-382 (418)
408 PRK09188 serine/threonine prot 99.9 2.1E-23 4.6E-28 218.5 14.5 166 407-593 16-195 (365)
409 COG0515 SPS1 Serine/threonine 99.9 4.8E-21 1E-25 201.1 21.2 255 411-675 2-275 (384)
410 KOG1164 Casein kinase (serine/ 99.9 5.2E-21 1.1E-25 201.2 19.9 261 410-681 19-299 (322)
411 KOG0590 Checkpoint kinase and 99.8 2E-21 4.3E-26 217.0 4.3 254 414-679 323-589 (601)
412 cd05147 RIO1_euk RIO kinase fa 99.8 2.9E-20 6.3E-25 179.3 11.3 140 415-568 3-168 (190)
413 KOG1240 Protein kinase contain 99.8 3.4E-21 7.3E-26 214.0 5.4 248 410-678 24-294 (1431)
414 KOG1163 Casein kinase (serine/ 99.8 6.9E-20 1.5E-24 171.9 12.4 255 409-678 15-283 (341)
415 PRK10359 lipopolysaccharide co 99.8 2.3E-20 5E-25 182.0 9.4 174 407-612 29-216 (232)
416 KOG1023 Natriuretic peptide re 99.8 4.3E-20 9.4E-25 196.8 12.2 214 460-682 1-227 (484)
417 PLN03150 hypothetical protein; 99.8 1.7E-19 3.6E-24 204.6 15.5 142 22-186 368-512 (623)
418 cd05145 RIO1_like RIO kinase f 99.8 2.6E-19 5.5E-24 173.4 13.9 141 414-569 2-169 (190)
419 KOG0617 Ras suppressor protein 99.8 1.1E-21 2.3E-26 174.8 -4.4 174 67-246 32-211 (264)
420 KOG1165 Casein kinase (serine/ 99.8 1.8E-18 3.9E-23 169.6 16.3 254 410-678 29-298 (449)
421 KOG4158 BRPK/PTEN-induced prot 99.8 4.4E-19 9.5E-24 177.5 12.0 195 464-673 274-508 (598)
422 PRK12274 serine/threonine prot 99.8 7E-19 1.5E-23 167.7 12.2 185 413-620 6-209 (218)
423 KOG0603 Ribosomal protein S6 k 99.8 7.5E-20 1.6E-24 194.5 4.3 226 416-669 1-232 (612)
424 PRK10345 hypothetical protein; 99.8 7.8E-18 1.7E-22 163.9 14.1 137 412-564 5-156 (210)
425 KOG4194 Membrane glycoprotein 99.8 5.1E-20 1.1E-24 192.0 -1.5 192 69-260 270-465 (873)
426 PF14531 Kinase-like: Kinase-l 99.7 1.6E-17 3.5E-22 166.9 13.0 234 413-666 16-288 (288)
427 cd05144 RIO2_C RIO kinase fami 99.7 6.8E-17 1.5E-21 157.7 12.4 147 402-569 8-177 (198)
428 PRK14879 serine/threonine prot 99.7 1.2E-16 2.6E-21 157.8 13.4 135 415-566 2-143 (211)
429 PRK09605 bifunctional UGMP fam 99.7 1E-16 2.2E-21 180.1 13.0 140 408-567 332-477 (535)
430 smart00090 RIO RIO-like kinase 99.7 1.4E-16 3E-21 159.1 12.4 144 410-568 29-199 (237)
431 KOG4237 Extracellular matrix p 99.7 2.5E-18 5.4E-23 172.2 -0.6 199 60-258 49-370 (498)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 2E-17 4.4E-22 172.9 5.6 171 482-673 330-510 (516)
433 TIGR03724 arch_bud32 Kae1-asso 99.7 2.3E-16 5E-21 154.1 12.2 131 416-566 1-138 (199)
434 KOG1166 Mitotic checkpoint ser 99.7 2.1E-16 4.5E-21 180.0 10.9 194 406-616 695-901 (974)
435 KOG0444 Cytoskeletal regulator 99.6 1.4E-17 3E-22 174.8 -0.6 162 69-235 104-315 (1255)
436 KOG4194 Membrane glycoprotein 99.6 1.2E-16 2.6E-21 167.1 4.3 165 69-233 174-338 (873)
437 KOG0617 Ras suppressor protein 99.6 2.3E-17 4.9E-22 147.3 -1.9 153 88-245 29-184 (264)
438 KOG0606 Microtubule-associated 99.6 1E-15 2.3E-20 170.8 6.8 206 409-667 83-304 (1205)
439 KOG0444 Cytoskeletal regulator 99.6 1.4E-16 3.1E-21 167.4 -0.4 153 68-225 32-186 (1255)
440 cd05119 RIO RIO kinase family, 99.6 8E-15 1.7E-19 141.7 11.3 138 414-569 2-166 (187)
441 cd05120 APH_ChoK_like Aminogly 99.6 2E-14 4.4E-19 133.1 13.0 135 414-567 3-139 (155)
442 PRK01723 3-deoxy-D-manno-octul 99.6 3.2E-14 6.9E-19 142.4 14.1 138 414-566 36-191 (239)
443 KOG1266 Protein kinase [Signal 99.5 1.2E-14 2.7E-19 142.8 5.7 207 459-676 120-332 (458)
444 KOG0472 Leucine-rich repeat pr 99.5 2E-16 4.4E-21 158.8 -6.9 169 69-245 138-308 (565)
445 KOG0472 Leucine-rich repeat pr 99.5 1.4E-15 3E-20 152.9 -2.2 152 69-225 389-541 (565)
446 KOG0532 Leucine-rich repeat (L 99.5 1.3E-15 2.8E-20 159.5 -5.3 167 70-245 77-245 (722)
447 TIGR01982 UbiB 2-polyprenylphe 99.4 3.8E-13 8.3E-18 146.2 12.1 147 410-569 119-309 (437)
448 KOG0590 Checkpoint kinase and 99.4 1.5E-14 3.2E-19 162.0 1.1 253 411-676 22-287 (601)
449 PRK15387 E3 ubiquitin-protein 99.4 2.8E-13 6E-18 153.9 11.1 72 165-245 383-456 (788)
450 PRK15370 E3 ubiquitin-protein 99.4 8.1E-13 1.8E-17 151.0 9.0 143 68-226 220-381 (754)
451 KOG0532 Leucine-rich repeat (L 99.4 2.7E-14 5.9E-19 149.6 -3.4 154 70-232 100-253 (722)
452 PRK15370 E3 ubiquitin-protein 99.4 1.1E-12 2.5E-17 149.8 9.1 141 69-227 179-319 (754)
453 KOG0618 Serine/threonine phosp 99.4 3.3E-14 7.1E-19 156.8 -3.8 161 83-247 301-489 (1081)
454 PRK15387 E3 ubiquitin-protein 99.3 3.4E-12 7.4E-17 145.1 11.6 52 188-245 382-433 (788)
455 cd00116 LRR_RI Leucine-rich re 99.3 3.5E-13 7.5E-18 141.9 1.2 159 67-225 80-263 (319)
456 KOG0618 Serine/threonine phosp 99.3 2E-13 4.2E-18 150.8 -1.4 151 69-224 311-488 (1081)
457 PLN03150 hypothetical protein; 99.3 3.1E-12 6.6E-17 145.6 8.2 94 117-210 419-512 (623)
458 cd05151 ChoK Choline Kinase (C 99.3 1.7E-11 3.7E-16 116.3 10.1 132 414-565 3-135 (170)
459 PRK04750 ubiB putative ubiquin 99.3 1.8E-11 3.9E-16 134.6 11.5 148 408-569 119-316 (537)
460 PLN03210 Resistant to P. syrin 99.3 1.8E-11 3.9E-16 149.2 12.7 159 69-231 612-821 (1153)
461 cd00116 LRR_RI Leucine-rich re 99.3 8.2E-13 1.8E-17 139.1 0.8 159 69-227 52-236 (319)
462 KOG0601 Cyclin-dependent kinas 99.3 6.1E-12 1.3E-16 134.8 7.0 248 410-674 115-378 (524)
463 PLN03210 Resistant to P. syrin 99.3 3E-11 6.5E-16 147.3 13.7 127 68-199 589-715 (1153)
464 KOG0601 Cyclin-dependent kinas 99.2 1.6E-11 3.5E-16 131.6 6.3 248 407-678 263-517 (524)
465 KOG1259 Nischarin, modulator o 99.2 2.7E-12 5.8E-17 124.8 -1.8 136 88-229 280-416 (490)
466 PF14580 LRR_9: Leucine-rich r 99.2 2.8E-11 6E-16 113.5 4.9 126 88-218 15-146 (175)
467 COG4886 Leucine-rich repeat (L 99.1 2.1E-11 4.5E-16 132.4 3.8 156 68-229 116-272 (394)
468 cd05154 ACAD10_11_like Acyl-Co 99.1 4.3E-10 9.2E-15 111.6 12.3 148 414-566 3-206 (223)
469 KOG1243 Protein kinase [Genera 99.1 8.8E-10 1.9E-14 119.3 15.1 167 431-616 35-201 (690)
470 COG4886 Leucine-rich repeat (L 99.1 5.1E-11 1.1E-15 129.4 4.5 149 72-226 97-246 (394)
471 cd05146 RIO3_euk RIO kinase fa 99.1 2.2E-09 4.8E-14 102.7 13.8 137 415-568 3-175 (197)
472 KOG4237 Extracellular matrix p 99.0 3.2E-11 6.9E-16 121.7 -1.9 169 60-256 39-210 (498)
473 KOG1259 Nischarin, modulator o 99.0 5.2E-11 1.1E-15 116.0 -1.2 130 69-204 285-415 (490)
474 PF14580 LRR_9: Leucine-rich r 99.0 3.9E-10 8.4E-15 105.8 4.3 111 112-227 15-128 (175)
475 COG3642 Mn2+-dependent serine/ 98.9 9.2E-09 2E-13 95.0 12.3 132 415-566 2-140 (204)
476 KOG3087 Serine/threonine prote 98.9 1.2E-08 2.5E-13 93.7 12.3 143 413-565 11-164 (229)
477 KOG3741 Poly(A) ribonuclease s 98.9 2.3E-08 5E-13 105.1 14.4 170 423-616 290-474 (655)
478 PF13855 LRR_8: Leucine rich r 98.9 1.2E-09 2.6E-14 84.3 3.6 60 93-152 2-61 (61)
479 PF13855 LRR_8: Leucine rich r 98.8 2.3E-09 5E-14 82.7 3.2 61 116-176 1-61 (61)
480 KOG0606 Microtubule-associated 98.8 1.2E-09 2.7E-14 123.1 2.2 247 409-670 804-1084(1205)
481 PRK15123 lipopolysaccharide co 98.8 8.1E-08 1.7E-12 97.3 15.1 144 415-566 28-194 (268)
482 PF01163 RIO1: RIO1 family; I 98.8 5.7E-08 1.2E-12 92.8 10.8 126 424-567 1-156 (188)
483 KOG4579 Leucine-rich repeat (L 98.7 1.1E-09 2.3E-14 95.1 -3.7 82 117-201 54-136 (177)
484 KOG3207 Beta-tubulin folding c 98.6 3.8E-09 8.3E-14 108.4 -1.2 156 69-225 122-284 (505)
485 PF08263 LRRNT_2: Leucine rich 98.6 4.3E-08 9.3E-13 69.3 4.2 39 25-65 2-43 (43)
486 KOG2137 Protein kinase [Signal 98.6 1.1E-08 2.4E-13 111.5 1.1 154 519-677 106-267 (700)
487 KOG4579 Leucine-rich repeat (L 98.5 1.6E-09 3.5E-14 94.0 -5.7 137 64-205 23-163 (177)
488 KOG1859 Leucine-rich repeat pr 98.5 1E-08 2.2E-13 111.1 -3.2 126 117-249 165-294 (1096)
489 PF06293 Kdo: Lipopolysacchari 98.5 1.2E-06 2.5E-11 85.9 11.5 107 451-566 56-170 (206)
490 KOG3207 Beta-tubulin folding c 98.5 4E-08 8.6E-13 101.1 0.9 157 68-225 146-314 (505)
491 PRK09902 hypothetical protein; 98.4 4.5E-06 9.8E-11 80.2 13.9 140 417-565 26-178 (216)
492 KOG1859 Leucine-rich repeat pr 98.4 6.2E-09 1.3E-13 112.7 -7.7 126 93-225 165-292 (1096)
493 KOG0531 Protein phosphatase 1, 98.4 1.2E-07 2.6E-12 103.4 1.9 104 68-177 95-199 (414)
494 COG0478 RIO-like serine/threon 98.3 3E-06 6.6E-11 83.2 10.5 134 413-566 95-251 (304)
495 KOG0531 Protein phosphatase 1, 98.3 1.3E-07 2.9E-12 103.0 0.8 130 90-226 70-200 (414)
496 COG4248 Uncharacterized protei 98.2 1E-05 2.2E-10 83.4 11.9 254 414-680 16-301 (637)
497 COG0661 AarF Predicted unusual 98.2 7.3E-06 1.6E-10 90.1 11.6 147 410-569 127-317 (517)
498 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 2.1E-05 4.4E-10 78.1 13.5 139 415-565 7-181 (226)
499 KOG4658 Apoptotic ATPase [Sign 98.2 1.2E-06 2.6E-11 102.5 5.0 148 69-219 524-675 (889)
500 KOG1909 Ran GTPase-activating 98.2 5.1E-07 1.1E-11 90.7 0.9 158 68-226 30-227 (382)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-63 Score=600.16 Aligned_cols=534 Identities=28% Similarity=0.434 Sum_probs=320.1
Q ss_pred EEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeec
Q 005586 70 VANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCC 149 (689)
Q Consensus 70 v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 149 (689)
++.|+|++|.++|.+|..|.++++|+.|+|++|.++|.+|..+..+++|+.|+|++|++.|.+|..+ .+++|+.|+|++
T Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~ 484 (968)
T PLN00113 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSR 484 (968)
T ss_pred CCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcC
Confidence 3344444444444444444444444444444444444444444444444444444444444444333 234555666666
Q ss_pred ccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccc
Q 005586 150 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVP 229 (689)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p 229 (689)
|++++.+|..+.++++|+.|+|++|++++.+|..++++++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 66666666666666677777777777776777777777777777777777777777777777777777777777777777
Q ss_pred hhHHhccC--ccccccCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCc
Q 005586 230 SALKRLNG--GFQFQNNPGLCGDGIASLRACTVYDNTQINPVKPFGSHSNDTTPIDISEPSGFKEHCNQSQCSNSSKFPQ 307 (689)
Q Consensus 230 ~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~ 307 (689)
..+..+.. .+.+.+|+..+..+. ......... ..+ ..+.......+ ......|... . .....
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~~~p~--~~~~~~~~~------~~~--~~n~~lc~~~~--~~~~~~c~~~---~-~~~~~ 628 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPS--TGAFLAINA------SAV--AGNIDLCGGDT--TSGLPPCKRV---R-KTPSW 628 (968)
T ss_pred hhHhcCcccCEEeccCCcceeeCCC--cchhcccCh------hhh--cCCccccCCcc--ccCCCCCccc---c-cccee
Confidence 66655432 344555553332110 000000000 000 00000000000 0000011110 0 11111
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccchhhhhccccCCCCCCcccccccCCCCCCCCCCCCC
Q 005586 308 IAVLAAVTSVTVILAGTGILIFFRYRRHKQKIGNTSESSDWQLSTDLTLAKDFNRNGASPLVSLEYCHGWDPLGDYLNGT 387 (689)
Q Consensus 308 ~~ii~~v~~~~~ll~~~~~~~~~~~rr~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (689)
..++++++++++++++++++++++++|++.+.+ ..+... ..|+..
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------------~~~~~~------- 673 (968)
T PLN00113 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELK-RVENED---------------------------GTWELQ------- 673 (968)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhhhccccc-cccccc---------------------------cccccc-------
Confidence 222222222222222222222222222211110 000000 001000
Q ss_pred CCccccccccccCHHHHHHHhccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCC
Q 005586 388 GFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 466 (689)
Q Consensus 388 ~~~~~~~~~~~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~ 466 (689)
.+... ....++++++. ..|...+.||+|+||.||+|+. .+|..||||++..... ...+|++.+++++||
T Consensus 674 ~~~~~--~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~Hp 743 (968)
T PLN00113 674 FFDSK--VSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHP 743 (968)
T ss_pred ccccc--cchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCC
Confidence 00000 00123444443 4577888999999999999997 4799999999875432 122458889999999
Q ss_pred cceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCC
Q 005586 467 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 546 (689)
Q Consensus 467 niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~ 546 (689)
|||+++|+|.. .+..++||||+++|+|.++++. ++|.++.+|+.|+|+||+|||+.+ .++|+||||||+
T Consensus 744 nIv~~~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiH~dlkp~ 812 (968)
T PLN00113 744 NIVKLIGLCRS--EKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRC--SPAVVVGNLSPE 812 (968)
T ss_pred CcceEEEEEEc--CCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCC--CCCeecCCCCHH
Confidence 99999999954 4678999999999999999962 899999999999999999999653 466999999999
Q ss_pred ceeecCCCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHH---
Q 005586 547 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR--- 623 (689)
Q Consensus 547 NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~--- 623 (689)
||+++.++.+++. ||.......+ ....++.+|||||++.+..++.|+|||||||++|||+||+.|+.....
T Consensus 813 Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~ 886 (968)
T PLN00113 813 KIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG 886 (968)
T ss_pred hEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC
Confidence 9999999998876 6665433221 123467889999999999999999999999999999999999853211
Q ss_pred -HHHh------hhhhhHhhccccCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 624 -LAAE------SATFENFIDRNLKG--KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 624 -~~~~------~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
...+ ......++|+.+.. ....++..++.+++.+||+.||++||+|+||+++|+.+...
T Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 887 SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 0001 11223344554433 23456778899999999999999999999999999988654
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-58 Score=486.17 Aligned_cols=278 Identities=39% Similarity=0.761 Sum_probs=240.4
Q ss_pred cccCHHHHHHHhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEE
Q 005586 397 FRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 476 (689)
Q Consensus 397 ~~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~ 476 (689)
..|+++++..||++|+..+.||+|+||.||+|.+++|+.||||++....... .++|.+|++++++++|||+|+|+|||.
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 4699999999999999999999999999999999999999999888765433 567999999999999999999999997
Q ss_pred cCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCe
Q 005586 477 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 556 (689)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~ 556 (689)
+.+. +.+||||||+||+|.++|+..... +++|.+|++||.++|+||+|||+.. .|+||||||||+|||||+++++
T Consensus 142 e~~~-~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~--~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 142 EGGE-HRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGC--PPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred cCCc-eEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCC--CCCEecCCCCHHHeeECCCCCE
Confidence 6432 699999999999999999986543 6999999999999999999999864 7899999999999999999999
Q ss_pred EEecccccccccC-CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhH--------H---H
Q 005586 557 LIADCGLHKLLAD-DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSM--------R---L 624 (689)
Q Consensus 557 kl~DfGla~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~--------~---~ 624 (689)
||+|||+|+.... ........ .||.+|+||||+..+..++|+|||||||||+||+||+.+.+... . .
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred EccCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 9999999987765 32211111 78999999999999999999999999999999999998876321 1 1
Q ss_pred HHhhhhhhHhhccccC-CCCCH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 625 AAESATFENFIDRNLK-GKFSE-SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 625 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
......+.+++|+.+. +.++. .++.++.+++.+|++.+|++||+|.||+++|+....
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 1222367889999987 66665 689999999999999999999999999999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=414.69 Aligned_cols=254 Identities=28% Similarity=0.528 Sum_probs=213.1
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.+.||+|+||+||+|.++....||||++...... ...++|.+|+.+|.+++|||||+++|+|.+. ....++|||||++
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~-~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP-PGSLCIVTEYMPG 124 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-CCceEEEEEeCCC
Confidence 3569999999999999985445999999865432 2257999999999999999999999999543 1268999999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeEEecccccccccCCc
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGLHKLLADDI 571 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl~DfGla~~~~~~~ 571 (689)
|+|.++|+.. ....++|..+++||.|||+||.|||+.+ | ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~---~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEG---P-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCC---C-eeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999885 2245999999999999999999999865 3 99999999999999997 99999999998776532
Q ss_pred eeeeecCCCCCCCCCccccc--cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVT--TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~--~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
.......||..|||||++. ...|+.|+|||||||+||||+||+.||....... ....+.....+..++..+..
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~----~~~~v~~~~~Rp~~p~~~~~ 273 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ----VASAVVVGGLRPPIPKECPP 273 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcCCCCCCCccCCH
Confidence 1233367899999999999 5689999999999999999999999997653311 22333344556666777888
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 650 KLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+..++.+||+.||++||++.|++..|+.+
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999999999999999999855
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-49 Score=407.99 Aligned_cols=262 Identities=28% Similarity=0.549 Sum_probs=225.7
Q ss_pred ccccCHHHHHHHhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEE
Q 005586 396 SFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 475 (689)
Q Consensus 396 ~~~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~ 475 (689)
.+.++.+++.. .+.||+|-||.||.|.++....||+|.++... ....+|.+|+++|.+++|+|||+++|+|
T Consensus 200 ~wei~r~~l~l-------~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~ 270 (468)
T KOG0197|consen 200 PWEIPREELKL-------IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVC 270 (468)
T ss_pred CeeecHHHHHH-------HHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEE
Confidence 34566666654 46899999999999999988899999998763 3446899999999999999999999999
Q ss_pred EcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC
Q 005586 476 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 555 (689)
Q Consensus 476 ~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~ 555 (689)
.. .+..+||||||++|+|.+||+...+ ..+...+.+.+|.|||+||+||++++ +|||||.++||||+++..
T Consensus 271 ~~--~~piyIVtE~m~~GsLl~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLes~~-----~IHRDLAARNiLV~~~~~ 341 (468)
T KOG0197|consen 271 TK--QEPIYIVTEYMPKGSLLDYLRTREG--GLLNLPQLLDFAAQIAEGMAYLESKN-----YIHRDLAARNILVDEDLV 341 (468)
T ss_pred ec--CCceEEEEEecccCcHHHHhhhcCC--CccchHHHHHHHHHHHHHHHHHHhCC-----ccchhhhhhheeeccCce
Confidence 54 3579999999999999999997433 34888999999999999999999988 999999999999999999
Q ss_pred eEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHh
Q 005586 556 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENF 634 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 634 (689)
+||+||||||...++.+.......-++.|.|||.+..++++.|||||||||+||||+| |+.|+..... ..+.+.
T Consensus 342 vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-----~ev~~~ 416 (468)
T KOG0197|consen 342 VKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-----EEVLEL 416 (468)
T ss_pred EEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-----HHHHHH
Confidence 9999999999777776655555566788999999999999999999999999999999 7778755422 234455
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 635 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 635 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
+++..+-..|+.++..+.+||..||+.+|++|||++.+...|+...
T Consensus 417 le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 417 LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 6777777788899999999999999999999999999988887653
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-48 Score=385.80 Aligned_cols=261 Identities=20% Similarity=0.387 Sum_probs=218.1
Q ss_pred ccCHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEE
Q 005586 398 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 476 (689)
Q Consensus 398 ~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~ 476 (689)
.+++.|++. .+.||+|..|+|||+.++ +++.+|+|.+........++++.+|++++.+.+||+||.++|.|+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 356666654 578999999999999987 799999999977666667789999999999999999999999997
Q ss_pred cCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCCCC
Q 005586 477 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFN 555 (689)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~~~ 555 (689)
.... +..++||||++|||++++...+ .+++...-+||.+|++||.|||+ .+ ||||||||+|||++..|+
T Consensus 148 ~~~~-~isI~mEYMDgGSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~~~~-----IIHRDIKPsNlLvNskGe 217 (364)
T KOG0581|consen 148 SNGE-EISICMEYMDGGSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHEERK-----IIHRDIKPSNLLVNSKGE 217 (364)
T ss_pred eCCc-eEEeehhhcCCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhccC-----eeeccCCHHHeeeccCCC
Confidence 7643 7999999999999999998653 38889999999999999999996 44 999999999999999999
Q ss_pred eEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHH-HHHhhhhhhHh
Q 005586 556 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR-LAAESATFENF 634 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~-~~~~~~~~~~~ 634 (689)
+||+|||.++.+.+. ......||..|||||.+.+..|+.++||||||+.++|+.+|+.|+..... ...+...+..+
T Consensus 218 VKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I 294 (364)
T KOG0581|consen 218 VKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI 294 (364)
T ss_pred EEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH
Confidence 999999999988765 23345688899999999999999999999999999999999999965411 11111222333
Q ss_pred hccccCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 635 IDRNLKGKFSES-EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 635 ~~~~~~~~~~~~-~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+ .-....|.+ .+.++..++..|+++||.+||+++|+++|-+..
T Consensus 295 v~-~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~ 339 (364)
T KOG0581|consen 295 VD-EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK 339 (364)
T ss_pred hc-CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence 33 222334444 788999999999999999999999999886544
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-48 Score=418.76 Aligned_cols=261 Identities=25% Similarity=0.441 Sum_probs=221.2
Q ss_pred CcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 412 SEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
...+.||+|+||+||+|+.. +.+.||||.++.....+.+++|.+|+++++.++|||||+|+|.|.+ ++..++
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--~~P~~M 566 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE--GDPLCM 566 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc--CCeeEE
Confidence 34578999999999999853 4578999999998877788999999999999999999999999954 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCC----------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC
Q 005586 486 IYDFAPKGKLSKYLDQEEGS----------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 555 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~----------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~ 555 (689)
|+|||..|||.+||...... ..+|+-.+.+.||.|||.||+||-+.. +|||||.++|+||.++..
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-----FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-----FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-----ccccchhhhhceeccceE
Confidence 99999999999999754321 223889999999999999999999887 999999999999999999
Q ss_pred eEEecccccccccCCceeeee-cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhH
Q 005586 556 PLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 633 (689)
+||+||||+|......+++.. ...-+++|||||.|..++||++||||||||||||++| |+.|+.......+ ++.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV----Ie~ 717 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV----IEC 717 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH----HHH
Confidence 999999999977665555544 4445679999999999999999999999999999998 8889876543322 222
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccc
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 684 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~ 684 (689)
+-+..+ ...|+.++.+++.||..||+..|++||+++||-..|+......+
T Consensus 718 i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 718 IRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred HHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 223333 56788999999999999999999999999999999987765443
No 7
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=397.44 Aligned_cols=257 Identities=23% Similarity=0.454 Sum_probs=224.4
Q ss_pred CCcccccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
..+.++||.|.||.||+|+++ ....||||.++.....+.+.+|+.|..+|+++.||||++|.|+. ......+||
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV--Tks~PvMIi 708 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV--TKSKPVMII 708 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE--ecCceeEEE
Confidence 345689999999999999986 34679999999988888889999999999999999999999998 445789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
.|||+||+|+.||+.+.+. ++|.+...+.++||.||.||-.++ +|||||.++|||++.+..+||+|||++|.
T Consensus 709 TEyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsdm~-----YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSDMN-----YVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred hhhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhhcC-----chhhhhhhhheeeccceEEEeccccceee
Confidence 9999999999999988764 899999999999999999999988 89999999999999999999999999998
Q ss_pred ccCCce--eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 567 LADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 567 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
+.++.. +...+..-+++|.|||.+..+++|.+||||||||||||.++ |.+|+-+...+. ....+....+...
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-----VIkaIe~gyRLPp 855 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VIKAIEQGYRLPP 855 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-----HHHHHHhccCCCC
Confidence 866542 22233334578999999999999999999999999999986 899986654433 3445566777778
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
|.+++..+.+||+.||++|-.+||++.|++..|.....-
T Consensus 856 PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 856 PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 889999999999999999999999999999999776443
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=360.83 Aligned_cols=248 Identities=23% Similarity=0.385 Sum_probs=194.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.+|...+.||+|+|++||+|+++ ++..||||.+.... .++..+....|+++|++++|||||.|++++. .++..++|
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~--~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE--DDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe--cCCeEEEE
Confidence 35666778999999999999986 68999999998775 3455667899999999999999999999984 45799999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC------CCeEEec
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ------FNPLIAD 560 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~------~~~kl~D 560 (689)
||||.+|||.+|++..+ .+++.+...++.|+|.||++||+++ ||||||||.||||+.. -.+||+|
T Consensus 88 MEyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~~~~-----IiHRDLKPQNiLLs~~~~~~~~~~LKIAD 158 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLHENN-----IIHRDLKPQNILLSTTARNDTSPVLKIAD 158 (429)
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCCcceEEeccCCCCCCCceEEecc
Confidence 99999999999999875 3899999999999999999999998 9999999999999865 4579999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
||+||.+...... ....|++-|||||++..++|+.|+|+||.|++|||+++|+.||.......... .++ .+....
T Consensus 159 FGfAR~L~~~~~a--~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~-~~~--k~~~~~ 233 (429)
T KOG0595|consen 159 FGFARFLQPGSMA--ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL-YIK--KGNEIV 233 (429)
T ss_pred cchhhhCCchhHH--HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-HHh--cccccc
Confidence 9999998765432 23468889999999999999999999999999999999999997543221110 000 011112
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAV 672 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~ev 672 (689)
...+........++...-++.+|.+|-++.+-
T Consensus 234 ~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 234 PVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred CchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 22222333344455555556666666544443
No 9
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=366.00 Aligned_cols=264 Identities=25% Similarity=0.400 Sum_probs=218.2
Q ss_pred HhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.......++||+|-||.|..+....+..||||.++....+..+.+|.+|+++|++++|||||+|+|.|..+ +..++|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D--ePicmI 613 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD--DPLCMI 613 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC--CchHHH
Confidence 344555678999999999999999888999999999998888889999999999999999999999999764 678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
+|||++|+|.+|+..+.... ++-..-..|+.|||.||+||.+.+ +|||||.++|+|+|.++++||+|||++|.
T Consensus 614 ~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~n-----fVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESLN-----FVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhhc-----hhhccccccceeecCcccEEecCcccccc
Confidence 99999999999998875422 344556779999999999999987 99999999999999999999999999997
Q ss_pred ccCCceeeee-cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh--CCCCcchhHHHHHhhhhhhHhhccccC---
Q 005586 567 LADDIVFSVL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT--GSLVLTSSMRLAAESATFENFIDRNLK--- 640 (689)
Q Consensus 567 ~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~--- 640 (689)
+....++... +..-+++|||||.+..+++|.+||||+|||.|||+++ ...|+.+..+... .+...++++..-.
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VENAGEFFRDQGRQVV 765 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HHhhhhhcCCCCccee
Confidence 7655544433 3445689999999999999999999999999999976 5678765433222 1222233332222
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
...|.-++.++.+++.+||..|-++||+++++...|++.+
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 2346678889999999999999999999999999988643
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-45 Score=348.31 Aligned_cols=262 Identities=19% Similarity=0.343 Sum_probs=213.5
Q ss_pred cCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|.+.++||+|.||+|||+.. .+|..||.|.++-... .+..++..+|+.+|++++|||||+++++-..++....+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 355668999999999999974 5899999999974432 45567899999999999999999999965555555589999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+..|||...++........+++.+++++..|+++||.++|+.- .+..|+||||||.||+|+.+|.+|++||||+|.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999866555667999999999999999999999843 1234999999999999999999999999999998
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC-HH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-ES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 646 (689)
...... .....||+.||+||.+.+..|+.||||||+||++|||+.-+.||.+.... .....+. ..-....| +-
T Consensus 179 ~s~~tf-A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~-~L~~KI~----qgd~~~~p~~~ 252 (375)
T KOG0591|consen 179 SSKTTF-AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLL-SLCKKIE----QGDYPPLPDEH 252 (375)
T ss_pred cchhHH-HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHH-HHHHHHH----cCCCCCCcHHH
Confidence 765432 23457999999999999999999999999999999999999999765221 1111111 11111233 55
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.+.++.+|+..|+..||+.||+...++++++.
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 68899999999999999999997666666654
No 11
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=404.89 Aligned_cols=265 Identities=27% Similarity=0.513 Sum_probs=220.5
Q ss_pred CcccccccCCcceEEEEEecC--Cc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 412 SEVNLLGKGNFSSVYKGTLRD--GT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~~--g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
+..+.||+|+||.||+|.+.+ |. .||||.++.....++..+|.+|..+|++++|||||+++|+|.+ ....+|
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~--~~~~~i 772 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD--SGPPLI 772 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC--CCCcEE
Confidence 346789999999999999753 43 4999999988777888999999999999999999999999976 467899
Q ss_pred EEEcCCCCCHHHHhhhcCC---CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 486 IYDFAPKGKLSKYLDQEEG---SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
++|||++|||..||++.+. ....+...+.+.||.|||+|+.||++++ +|||||.++|+||++...+||+|||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-----fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-----FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-----CcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999997633 1345899999999999999999999988 8999999999999999999999999
Q ss_pred ccccccCCceeeeecC-CCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 563 LHKLLADDIVFSVLKT-SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 563 la~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
+||...+..++..... .-+.+|||||.+..+.++.|+|||||||+|||++| |..||.+...... +..+.. .-+
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v----~~~~~~-ggR 922 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV----LLDVLE-GGR 922 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH----HHHHHh-CCc
Confidence 9995544444333222 34568999999999999999999999999999999 7788865433221 111222 225
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccccccc
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFLF 688 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~~ 688 (689)
...|..+++.+.++|..||+.+|++||++..+++++..+....-.-+|
T Consensus 923 L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~ 970 (1025)
T KOG1095|consen 923 LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIY 970 (1025)
T ss_pred cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcc
Confidence 667888999999999999999999999999999988777665444443
No 12
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=369.49 Aligned_cols=254 Identities=20% Similarity=0.384 Sum_probs=214.4
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
.+|...++||+|||..+|.++. ..|..||+|++.+... ........+||++.++++|||||++++|| ++.+.+|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F--EDs~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF--EDSNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe--ecCCceEE
Confidence 4678889999999999999997 7899999999987542 33456788999999999999999999999 56789999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|.|+|++|+|.++++.. .++++.++..+..||+.||.|||+.+ |+|||||-.|++|++++++||+|||||.
T Consensus 96 vLELC~~~sL~el~Krr----k~ltEpEary~l~QIv~GlkYLH~~~-----IiHRDLKLGNlfL~~~~~VKIgDFGLAt 166 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRR----KPLTEPEARYFLRQIVEGLKYLHSLG-----IIHRDLKLGNLFLNENMNVKIGDFGLAT 166 (592)
T ss_pred EEEecCCccHHHHHHhc----CCCCcHHHHHHHHHHHHHHHHHHhcC-----ceecccchhheeecCcCcEEecccceee
Confidence 99999999999999843 35999999999999999999999988 9999999999999999999999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
.+..+.. ......||+-|+|||++.....+..+||||+|||||-|++|++||....-... +..+.... -.+|.
T Consensus 167 ~le~~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket----y~~Ik~~~--Y~~P~ 239 (592)
T KOG0575|consen 167 QLEYDGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET----YNKIKLNE--YSMPS 239 (592)
T ss_pred eecCccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH----HHHHHhcC--ccccc
Confidence 8875432 22345699999999999988999999999999999999999999976422111 11111111 12455
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
..+.+..+|+...++++|.+|||.++|+.+-....
T Consensus 240 ~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 240 HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 66788999999999999999999999998876643
No 13
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-44 Score=356.87 Aligned_cols=255 Identities=20% Similarity=0.324 Sum_probs=205.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCch------HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
+.|-..+.||+|+||.|-+|..+ +|+.||||++++..... ......+|+++|++++|||||++++++ +..+
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f--~~~d 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF--EVPD 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee--ecCC
Confidence 34556789999999999999865 79999999998664322 223456999999999999999999999 4457
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC---CCeEE
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FNPLI 558 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~---~~~kl 558 (689)
+.|+|+|||++|+|.+.+-.+.. +.+..-..++.|++.|+.|||+.| |+||||||+|||+..+ ..+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~G-----I~HRDiKPeNILl~~~~e~~llKI 320 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQG-----IIHRDIKPENILLSNDAEDCLLKI 320 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHcC-----cccccCCcceEEeccCCcceEEEe
Confidence 88999999999999999976643 667777889999999999999998 9999999999999866 77999
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCccccccCCC---CCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRF---TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 635 (689)
+|||+|+..+.... .....||+.|.|||++.+..+ ..|+|+||+|||||-+++|.+||.+...... -.+++.
T Consensus 321 tDFGlAK~~g~~sf--m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---l~eQI~ 395 (475)
T KOG0615|consen 321 TDFGLAKVSGEGSF--MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---LKEQIL 395 (475)
T ss_pred cccchhhcccccee--hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc---HHHHHh
Confidence 99999998875432 233568999999999987643 3488999999999999999999975422110 111221
Q ss_pred cccc--CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 636 DRNL--KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 636 ~~~~--~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+ ......+.+++..+++.+++..||++||+..|++++.|.-
T Consensus 396 ~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 396 KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 1111 1123456788999999999999999999999999988765
No 14
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-44 Score=368.56 Aligned_cols=254 Identities=26% Similarity=0.455 Sum_probs=215.8
Q ss_pred ccccCHHHHHHHhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEE
Q 005586 396 SFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 475 (689)
Q Consensus 396 ~~~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~ 475 (689)
.|.++++++.. .+-||.|+.|.||+|+++ ++.||||+++.-. ..+|+.|++++||||+.+.|+|
T Consensus 118 ~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 118 LWEIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hccCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeee
Confidence 35677777654 577999999999999997 6889999876432 2568899999999999999999
Q ss_pred EcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC
Q 005586 476 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 555 (689)
Q Consensus 476 ~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~ 555 (689)
.. ...++|||||++.|-|...|+... ++.-.....+..+||.||.|||... |||||||+-||||..+..
T Consensus 182 tq--sPcyCIiMEfCa~GqL~~VLka~~----~itp~llv~Wsk~IA~GM~YLH~hK-----IIHRDLKSPNiLIs~~d~ 250 (904)
T KOG4721|consen 182 TQ--SPCYCIIMEFCAQGQLYEVLKAGR----PITPSLLVDWSKGIAGGMNYLHLHK-----IIHRDLKSPNILISYDDV 250 (904)
T ss_pred cC--CceeEEeeeccccccHHHHHhccC----ccCHHHHHHHHHHhhhhhHHHHHhh-----HhhhccCCCceEeeccce
Confidence 43 467899999999999999998654 4777778899999999999999987 999999999999999999
Q ss_pred eEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh
Q 005586 556 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 635 (689)
+||+|||-++...+. ...+...||..|||||++.+.++++|+||||||||||||+||..||.+... ..++..+-
T Consensus 251 VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVG 324 (904)
T KOG4721|consen 251 VKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVG 324 (904)
T ss_pred EEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEecc
Confidence 999999999877654 233456789999999999999999999999999999999999999964321 12233333
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 636 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 636 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
...+....|..+++.+.-|++.||+..|..||++++++.+|..+.|.
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 44556677889999999999999999999999999999999998876
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=370.06 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=205.9
Q ss_pred HhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
..+.+...+.||+|.||+||+|+|.. .||||.++..... ...+.|++|+..+++-+|.||+-+.|||.. ...+|
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~---p~~AI 464 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN---PPLAI 464 (678)
T ss_pred CHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC---Cceee
Confidence 33334456889999999999999973 5999999987643 355799999999999999999999999954 34599
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+.++++-+|..+||..+ ..++..+.+.||.|||.||.|||.++ |||||||+.||+|.++++|||+||||+.
T Consensus 465 iTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK~-----IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAKN-----IIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred eehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhhh-----hhhhhccccceEEccCCcEEEeccccee
Confidence 999999999999999865 35999999999999999999999988 9999999999999999999999999986
Q ss_pred cccCC-ceeeeecCCCCCCCCCcccccc---CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC-
Q 005586 566 LLADD-IVFSVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK- 640 (689)
Q Consensus 566 ~~~~~-~~~~~~~~~~~~~y~aPE~~~~---~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 640 (689)
.-..- .........+.+.|||||++.. .+|++.+||||||+|+|||+||..||....+.. ++-.+-...+.
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----IifmVGrG~l~p 612 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----IIFMVGRGYLMP 612 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----eEEEecccccCc
Confidence 43210 0111222345677999999864 468999999999999999999999996322110 00000000001
Q ss_pred --CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 641 --GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 641 --~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
......+.+++.+|+..||..++++||.+.+|+..|+...|.
T Consensus 613 d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 613 DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 122356788999999999999999999999999988888763
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.2e-42 Score=367.40 Aligned_cols=264 Identities=23% Similarity=0.412 Sum_probs=208.0
Q ss_pred hccCCcccccccCCcceEEEEEe------cCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGR 480 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~ 480 (689)
.++|...+.||+|+||.||+|.. .+++.||||+++..........+.+|+.++.++ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-N 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-C
Confidence 45678889999999999999974 235789999998654444556899999999999 899999999988543 4
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCC-------------------------------------------------------
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGS------------------------------------------------------- 505 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~------------------------------------------------------- 505 (689)
...++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 5689999999999999999753210
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee-eeecCCCC
Q 005586 506 ---SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAA 581 (689)
Q Consensus 506 ---~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~ 581 (689)
...+++.+++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++........ ......++
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK-----CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC-----EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 134888999999999999999999987 999999999999999999999999999866433211 11223345
Q ss_pred CCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhcc
Q 005586 582 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTH 660 (689)
Q Consensus 582 ~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~ 660 (689)
..|+|||++.+..++.++|||||||++|||+| |+.||....... .+...+........+...+..+.+++.+||+
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 315 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRLKDGTRMRAPENATPEIYRIMLACWQ 315 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc
Confidence 78999999998899999999999999999997 999986432111 1111111111122334456679999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhCC
Q 005586 661 EDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 661 ~dp~~RPs~~evl~~L~~~~p 681 (689)
.||++||++.|+++.|+....
T Consensus 316 ~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 316 GDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999987643
No 17
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=367.63 Aligned_cols=254 Identities=25% Similarity=0.472 Sum_probs=208.9
Q ss_pred ccccccCCcceEEEEEecC--C--cE-EEEEEeccc--CCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLRD--G--TL-VAIRSINVT--SCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~l~~~--~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.++||+|+||.||+|.++. + .. ||||..+.. .......+|++|.++|.+++|||||+++|++.. ....++|
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~--~~Pl~iv 239 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL--EEPLMLV 239 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC--CCccEEE
Confidence 4799999999999999763 3 23 899998852 334566899999999999999999999999965 4789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
||+|+||+|.++|+.... .++..+++.++.++|+||+|||+.+ +|||||.++|+|++.++.+||+|||+++.
T Consensus 240 mEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k~-----~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSKN-----CIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHCC-----CcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999998754 4899999999999999999999988 89999999999999999999999999886
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
-..-.. .......++.|+|||.+..+.|++++|||||||++||+++ |..|+......... ..+.....+-..+.
T Consensus 312 ~~~~~~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~----~kI~~~~~r~~~~~ 386 (474)
T KOG0194|consen 312 GSQYVM-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK----AKIVKNGYRMPIPS 386 (474)
T ss_pred Ccceee-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH----HHHHhcCccCCCCC
Confidence 542111 1111235678999999999999999999999999999998 88888765332221 12223334444556
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
..+.++..++..||..+|++||+|.++.+.++.....
T Consensus 387 ~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 387 KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 6778889999999999999999999999999887544
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=350.49 Aligned_cols=258 Identities=28% Similarity=0.444 Sum_probs=207.1
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
+...+.||+|+||.||++... +|...|||......... .+.+.+|+++|.+++|||||+.+|.........+++.|||
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 445689999999999999976 49999999987664222 5678999999999999999999997533322368999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEeccccccccc
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKLLA 568 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~~~~ 568 (689)
+++|+|.+++...++ .+++.....++.||++||+|||+.+ ||||||||+|||++. ++.+||+|||+++...
T Consensus 98 ~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~g-----~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSKG-----IVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred cCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----EeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999987654 3999999999999999999999988 999999999999999 7999999999998776
Q ss_pred C--CceeeeecCCCCCCCCCccccccCC-CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 569 D--DIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 569 ~--~~~~~~~~~~~~~~y~aPE~~~~~~-~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
. ..........||+.|||||++..+. ...++||||+||++.||+||+.|+...... ...+-.+......+.++.
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~---~~~~~~ig~~~~~P~ip~ 246 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE---AEALLLIGREDSLPEIPD 246 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch---HHHHHHHhccCCCCCCCc
Confidence 3 2222233467899999999998643 335999999999999999999998653110 011111111112235666
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
..+.+..+++..|+..||++|||+.+++++.....
T Consensus 247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 77888999999999999999999999999876654
No 19
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=343.05 Aligned_cols=242 Identities=21% Similarity=0.303 Sum_probs=200.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..++||+|+||+||.++.+ +++.+|+|++++... ..+.+....|..+|.+++||.||++.--+ ++.+.+|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF--Qt~~kLyl 102 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF--QTEEKLYL 102 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--ccCCeEEE
Confidence 57888999999999999999876 599999999987764 23467888999999999999999997655 56788999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+||+.||.|..+|...+ .+++.....++.+|+.||.|||+.+ ||||||||+|||||++|+++|+||||++
T Consensus 103 Vld~~~GGeLf~hL~~eg----~F~E~~arfYlaEi~lAL~~LH~~g-----IiyRDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG----RFSEDRARFYLAEIVLALGYLHSKG-----IIYRDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred EEeccCCccHHHHHHhcC----CcchhHHHHHHHHHHHHHHHHHhCC-----eeeccCCHHHeeecCCCcEEEeccccch
Confidence 999999999999998654 3888989999999999999999998 9999999999999999999999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
..-.+.. ......||+.|||||++.+..|+..+|+||+||++|||+||.+||.......... .+.... ....+.
T Consensus 174 ~~~~~~~-~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~----~I~~~k-~~~~p~ 247 (357)
T KOG0598|consen 174 EDLKDGD-ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYD----KILKGK-LPLPPG 247 (357)
T ss_pred hcccCCC-ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHH----HHhcCc-CCCCCc
Confidence 5433221 2223578999999999999999999999999999999999999997654322211 111111 112233
Q ss_pred HHHHHHHHHHHHhccCCCCCCC
Q 005586 646 SEAAKLGKMALVCTHEDPENRP 667 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RP 667 (689)
-.+.+..+++...+..||++|-
T Consensus 248 ~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 248 YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred cCCHHHHHHHHHHhccCHHHhc
Confidence 3566788999999999999995
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-42 Score=352.63 Aligned_cols=261 Identities=20% Similarity=0.340 Sum_probs=210.3
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCch-HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.|...++||+|.||.||+|+. .+|+.||+|++.....+. ...-..+||.+|++++||||++|.+...+......|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 3466678999999999999985 579999999998665332 33456799999999999999999999988767899999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
+|||+. ||..++....- .++..++..++.|++.||+|+|+.+ |+|||||.+|||||.+|.+||+|||||++
T Consensus 197 FeYMdh-DL~GLl~~p~v---kft~~qIKc~mkQLl~Gl~~cH~~g-----vlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPGV---KFTEPQIKCYMKQLLEGLEYCHSRG-----VLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred Eecccc-hhhhhhcCCCc---ccChHHHHHHHHHHHHHHHHHhhcC-----eeeccccccceEEcCCCCEEeccccceee
Confidence 999976 89998876432 4899999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc--------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-------- 637 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-------- 637 (689)
+........+....|.+|+|||.+.+. .|+.++|+||.||||.||++|++.+.+.....+...+++-.-.+
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 876655455566778999999998875 69999999999999999999999987665444333322211000
Q ss_pred ------ccCC--CCC-------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 638 ------NLKG--KFS-------ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 638 ------~~~~--~~~-------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.++. .+. ..-+...++|+..+|..||.+|.|+.++++.=..
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 0010 111 1124567889999999999999999999976544
No 21
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-41 Score=348.33 Aligned_cols=249 Identities=22% Similarity=0.362 Sum_probs=203.8
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCch--HHHHHHHHHHHHhccCCCcceeEeeEEEc--CCCCeEEEEEEc
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS--EEAEFVKGLYLLTSLRHENIIRLRGFCCS--RGRGECFLIYDF 489 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~~~lV~e~ 489 (689)
...||+|++|.||+|.+ +|+.||||+++...... ..+.|.+|+.+|.+++|||||+++|++.+ ......++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999998 58999999997653222 24678899999999999999999999866 444578999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
+++|+|.++++... .++|..++.++.+++.||+|||+. + ++||||||+|||+++++.+||+|||+++.+.
T Consensus 104 ~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~-----~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 104 CTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYTN-----KPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred CCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcCC-----CCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 99999999997643 489999999999999999999974 4 7799999999999999999999999998764
Q ss_pred CCceeeeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+.....+...+..
T Consensus 175 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~ 246 (283)
T PHA02988 175 SPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE----IYDLIINKNNSLKLPLD 246 (283)
T ss_pred ccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcCCCCCCCCc
Confidence 422 23456788999999876 689999999999999999999999997542211 11222222223334445
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.+..+.+++.+||+.||++||++.|+++.|+...
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 6778999999999999999999999999998653
No 22
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.5e-42 Score=331.80 Aligned_cols=254 Identities=20% Similarity=0.329 Sum_probs=197.4
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHH-HHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~-~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.|+...++|+|+||.|||++.+ +|+.||||++......... +-.++||++|++++|+|+|.|+.+| +.....++|+
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF--rrkrklhLVF 80 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF--RRKRKLHLVF 80 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH--HhcceeEEEe
Confidence 4666788999999999999987 5999999999877643333 4568999999999999999999998 4457899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++.--|. -|.... ..++.....+++.|+++|+.|+|+.+ +|||||||+|||++.++.+||+|||+||.+
T Consensus 81 E~~dhTvL~-eLe~~p---~G~~~~~vk~~l~Q~l~ai~~cHk~n-----~IHRDIKPENILit~~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 81 EYCDHTVLH-ELERYP---NGVPSELVKKYLYQLLKAIHFCHKNN-----CIHRDIKPENILITQNGVVKLCDFGFARTL 151 (396)
T ss_pred eecchHHHH-HHHhcc---CCCCHHHHHHHHHHHHHHhhhhhhcC-----eecccCChhheEEecCCcEEeccchhhHhh
Confidence 999764444 343322 23888999999999999999999988 999999999999999999999999999988
Q ss_pred cCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------hhHhhc
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT----------FENFID 636 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~----------~~~~~~ 636 (689)
..... ..+....|.+|+|||.+.+ .+|...+||||.||++.||+||.+-|.+.........+ ..+++.
T Consensus 152 ~~pgd-~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 152 SAPGD-NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred cCCcc-hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 63211 2233457888999999887 68999999999999999999999887654322211110 111111
Q ss_pred c--ccC--------------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 637 R--NLK--------------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 637 ~--~~~--------------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
. .+. .++ +..+.-+.+++..|++.||++|++.+|++.+-
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~ 285 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP 285 (396)
T ss_pred cCCceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence 1 000 011 12345688999999999999999999998653
No 23
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=355.71 Aligned_cols=260 Identities=22% Similarity=0.407 Sum_probs=223.2
Q ss_pred HHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 404 VESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 404 l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++....+....++||-|-||.||.|.|+ -...||||.++.+ ..+..+|++|..+|+.++|||+|+|+|+|.. ...
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED--tMeveEFLkEAAvMKeikHpNLVqLLGVCT~--EpP 337 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH--EPP 337 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc--chhHHHHHHHHHHHHhhcCccHHHHhhhhcc--CCC
Confidence 3333344556789999999999999997 4678999999876 4567899999999999999999999999954 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.|||+|||.+|+|.+||++... +.++-...+.+|.||+.||+||...+ +|||||.++|+|+.++..+||+|||
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEkkn-----FIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEKKN-----FIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred eEEEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHHhh-----hhhhhhhhhhccccccceEEeeccc
Confidence 8999999999999999998754 34777788999999999999999877 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
|+|+|..+.+....+..-++.|.|||.+....++.|+|||+|||+||||.| |-.|+..- +...+.+++....+-
T Consensus 411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqVY~LLEkgyRM 485 (1157)
T KOG4278|consen 411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYGLLEKGYRM 485 (1157)
T ss_pred hhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHHHHHHhccccc
Confidence 999998887665555555678999999999999999999999999999998 66677542 223345566677777
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.++.|+..+++||+.||++.|.+||++.|+-+.++..
T Consensus 486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 78899999999999999999999999999999888654
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=336.20 Aligned_cols=261 Identities=20% Similarity=0.329 Sum_probs=208.8
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||.|..++||+|+. +.+..||||++..+.+....+.+.+|+..|+.++||||++++..|.. +.+.++||
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv--~~~LWvVm 103 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV--DSELWVVM 103 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe--cceeEEee
Confidence 4577788999999999999985 46899999999999888788899999999999999999999887754 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
.||.+||+.+.+...-.. .+++..+..|.+++++||.|||++| .||||||+.||||+.+|.+||+|||.+..+
T Consensus 104 pfMa~GS~ldIik~~~~~--Gl~E~~Ia~iLre~LkaL~YLH~~G-----~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPD--GLEEASIATILREVLKALDYLHQNG-----HIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred hhhcCCcHHHHHHHHccc--cccHHHHHHHHHHHHHHHHHHHhcC-----ceecccccccEEEcCCCcEEEcCceeeeee
Confidence 999999999999875432 3899999999999999999999998 799999999999999999999999998766
Q ss_pred cCCc---eeeeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 568 ADDI---VFSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 568 ~~~~---~~~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
.+.. ........+++.|||||++.. ..|+.|+||||||+...||.+|..||.......+.-..+..-...-....
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~ 256 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSG 256 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccccc
Confidence 4432 122234568899999999543 46999999999999999999999999654322111111110000000111
Q ss_pred CCH----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 643 FSE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 643 ~~~----~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.+. .....+.+++..|+++||++|||+++++++-..
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 111 234578999999999999999999999987543
No 25
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-40 Score=341.75 Aligned_cols=255 Identities=19% Similarity=0.386 Sum_probs=206.0
Q ss_pred ccCCcccccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|+..+.||+|+||.||+|.++ .+..||+|.++..........|.+|+..+.+++||||++++|++.. .+..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CCCcE
Confidence 45777899999999999999864 3678999999876544555789999999999999999999999854 57899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|.+++.... ..++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+|++|||.+
T Consensus 83 lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~~-----iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEMG-----YVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----EeeccccHhhEEEcCCCcEEECCCccc
Confidence 9999999999999997643 24899999999999999999999887 999999999999999999999999987
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
...............++..|+|||.+.+..++.++|||||||++||+++ |+.||........ .. .+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~----~~-~~~~~~~~~~ 229 (266)
T cd05064 155 QEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV----IK-AVEDGFRLPA 229 (266)
T ss_pred ccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----HH-HHHCCCCCCC
Confidence 6543322222222334567999999999999999999999999999875 9999864322111 11 1111222233
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+...+..+.+++..||+.+|++||++.|+.+.|..
T Consensus 230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 44566789999999999999999999999998865
No 26
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2e-40 Score=346.99 Aligned_cols=262 Identities=24% Similarity=0.379 Sum_probs=203.0
Q ss_pred ccCCcccccccCCcceEEEEEecC-----------------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD-----------------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 471 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l 471 (689)
++|...+.||+|+||.||+|.+++ +..||+|.+..........+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778899999999999998642 347999999866544556789999999999999999999
Q ss_pred eeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCC---------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCC
Q 005586 472 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG---------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 536 (689)
Q Consensus 472 ~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~---------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~ 536 (689)
++++.. .+..++||||+++|+|.+++..... ....++|..+++|+.|++.||+|||+.+
T Consensus 85 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---- 158 (304)
T cd05096 85 LGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---- 158 (304)
T ss_pred EEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC----
Confidence 999954 4678999999999999999865321 1134789999999999999999999987
Q ss_pred ceeecCCCCCceeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh--
Q 005586 537 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-- 613 (689)
Q Consensus 537 ~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-- 613 (689)
|+||||||+|||+++++.+||+|||+++.+....... .....++..|+|||++..+.++.++|||||||++|||++
T Consensus 159 -ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 159 -FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred -ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 9999999999999999999999999998664432221 122334678999999988899999999999999999987
Q ss_pred CCCCcchhHHHHHhhhhhhHhhccc---cCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 614 GSLVLTSSMRLAAESATFENFIDRN---LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 614 G~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..|+.......... ...+..... .....+..++..+.+++.+||+.||++||+|.||.+.|++
T Consensus 238 ~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTDEQVIE-NAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCHHHHHH-HHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 556665432111111 111111111 1111233456789999999999999999999999998863
No 27
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-40 Score=358.37 Aligned_cols=260 Identities=23% Similarity=0.408 Sum_probs=205.5
Q ss_pred hccCCcccccccCCcceEEEEEe------cCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGR 480 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~ 480 (689)
.++|...+.||+|+||.||+|.. .++..||||+++..........+.+|++++..+ +|||||+++++|.. .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~--~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV--G 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--C
Confidence 34677789999999999999974 246689999997655445556789999999999 89999999999944 5
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCC--------------------------------------------------------
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEG-------------------------------------------------------- 504 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~-------------------------------------------------------- 504 (689)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 778999999999999999975321
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 505 ---------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 505 ---------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
....++|..+++++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-----CIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 0124789999999999999999999987 99999999999999999999999999987654
Q ss_pred Cceeeee-cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 570 DIVFSVL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 570 ~~~~~~~-~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
....... ...++..|+|||.+.+..++.++|||||||++|||+| |..|+....... .+.+.+........+...
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~ 342 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGYRMLSPECA 342 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCccCCCCCCC
Confidence 3221111 1234567999999999999999999999999999998 888885432111 111222222222223334
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.++.+++..||+.||++||+|.||+++|+.
T Consensus 343 ~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 343 PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 5679999999999999999999999999985
No 28
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-40 Score=315.84 Aligned_cols=261 Identities=22% Similarity=0.339 Sum_probs=207.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchH-HHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSE-EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.+|...+.+|+|.||.||+|+.. +|+.||||+++....++. .....+||+.|+.++|+||+.+++.+. ..+...+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~--~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP--HKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc--CCCceEEE
Confidence 35667789999999999999864 799999999987754332 357889999999999999999999984 45778999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
+|||+. +|+..++++. ..++-.+...++.++++|++|||+.. |+||||||.|+|++.++.+||+|||+++.
T Consensus 80 fEfm~t-dLe~vIkd~~---i~l~pa~iK~y~~m~LkGl~y~H~~~-----IlHRDlKPnNLLis~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKN---IILSPADIKSYMLMTLKGLAYCHSKW-----ILHRDLKPNNLLISSDGQLKIADFGLARF 150 (318)
T ss_pred EEeccc-cHHHHhcccc---cccCHHHHHHHHHHHHHHHHHHHhhh-----hhcccCCccceEEcCCCcEEeecccchhc
Confidence 999965 9999998754 35888999999999999999999988 99999999999999999999999999998
Q ss_pred ccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-------------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE------------- 632 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~------------- 632 (689)
+........ ....|.+|+|||.+.+ +.|+..+||||.||++.||+-|.+-|.+.....+....+.
T Consensus 151 f~~p~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 151 FGSPNRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred cCCCCcccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence 865433222 2256778999998876 5699999999999999999999877755433222211111
Q ss_pred -Hhhc--------cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 633 -NFID--------RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 633 -~~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
.+.| ..........+..++.+++..++..+|.+|++++|++++-....-
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 0000 001111233456677999999999999999999999998766643
No 29
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.2e-40 Score=356.15 Aligned_cols=261 Identities=21% Similarity=0.405 Sum_probs=206.6
Q ss_pred hccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGR 480 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~ 480 (689)
.++|...+.||+|+||.||+|... ++..||+|+++..........+.+|+++++.+ +|+|||+++++|.. .
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~--~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH--G 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--C
Confidence 346778899999999999999742 34579999998665444556789999999999 89999999999844 5
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCC--------------------------------------------------------
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEG-------------------------------------------------------- 504 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~-------------------------------------------------------- 504 (689)
+..++||||+++|+|.++++....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 689999999999999999864321
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceee
Q 005586 505 ----------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 574 (689)
Q Consensus 505 ----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 574 (689)
....+++.+.++|+.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-----iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-----CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-----EEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 0124788999999999999999999987 9999999999999999999999999998664432221
Q ss_pred ee-cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHH
Q 005586 575 VL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 652 (689)
Q Consensus 575 ~~-~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 652 (689)
.. ...++..|||||++.+..++.++|||||||++|||++ |+.||...... ..+...+........+...+.++.
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 345 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN----SKFYKMVKRGYQMSRPDFAPPEIY 345 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----HHHHHHHHcccCccCCCCCCHHHH
Confidence 11 2234567999999988899999999999999999997 99998653211 112222222222222233356799
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 653 KMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 653 ~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+++.+||+.||++||++.+|+++|+.+
T Consensus 346 ~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 346 SIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999999874
No 30
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.7e-40 Score=347.94 Aligned_cols=260 Identities=24% Similarity=0.429 Sum_probs=208.8
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
.+|+..+.||+|+||.||+|++. +|. .||+|.++........++|.+|+.+++.++||||++++|+|.. ...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---~~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC---CCc
Confidence 45888899999999999999864 343 4899998765444556789999999999999999999999854 356
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++|+||+++|+|.+++.... ..+++...+.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-----iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEERR-----LVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred eeeeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHhcC-----eeccccchhheEecCCCcEEEccccc
Confidence 79999999999999998653 24889999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++.+..... ........+..|+|||++.+..++.++|||||||++|||+| |+.|+....... +...+......
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~ 230 (316)
T cd05108 156 AKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERL 230 (316)
T ss_pred cccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhCCCCC
Confidence 987754322 12222334567999999999999999999999999999998 999986532111 12222222222
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccc
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 684 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~ 684 (689)
..+..+..++.+++..||+.+|++||++.+++.++........
T Consensus 231 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 231 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 2333455678999999999999999999999999987765443
No 31
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.1e-40 Score=340.18 Aligned_cols=262 Identities=26% Similarity=0.407 Sum_probs=209.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|.+. +|. .+++|.+..........++..|+..+++++||||+++++++.. ...+
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~~ 84 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASLQ 84 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---CccE
Confidence 5667789999999999999874 444 4788887654433445678889999999999999999998732 4578
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+++||+++|+|.+++..... .++|..++.|+.|++.||+|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEEHR-----MVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred EEEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHCC-----EeccccCcceEEEcCCCcEEEcCCccc
Confidence 99999999999999976432 4899999999999999999999887 999999999999999999999999999
Q ss_pred ccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 565 KLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 565 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
+....... .......++..|+|||++.++.++.++|||||||++||++| |+.|+....... ..+.+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~ 231 (279)
T cd05111 157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-----VPDLLEKGERLA 231 (279)
T ss_pred eeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCcCC
Confidence 87643321 12223345678999999988899999999999999999998 999986532211 112222211111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcccccc
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 687 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~ 687 (689)
.+..+...+.+++.+||..+|++||++.|+++.|.......+.|+
T Consensus 232 ~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~~ 276 (279)
T cd05111 232 QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRYL 276 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCccee
Confidence 222344567889999999999999999999999999988888886
No 32
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.7e-41 Score=342.60 Aligned_cols=249 Identities=30% Similarity=0.598 Sum_probs=195.4
Q ss_pred ccccccCCcceEEEEEec-----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLR-----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.+.||.|.||.||+|.+. .+..|+||.++.........+|.+|++.+.+++||||++++|+|.. .+..++|||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~--~~~~~lv~e 81 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE--NEPLFLVME 81 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--SSSEEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc--ccccccccc
Confidence 468999999999999987 3678999999765544557899999999999999999999999973 456899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++|+... ...+++..+..|+.|||+||+|||+.+ ++|+||+++||++++++.+||+|||+++...
T Consensus 82 ~~~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~-----iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSNN-----IIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp --TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHTT-----EEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccc
Confidence 999999999998862 235899999999999999999999987 9999999999999999999999999998763
Q ss_pred CCc-eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 569 DDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 569 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
... ............|+|||.+....++.++||||||+++|||+| |+.|+....... ....+ ....+...+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~----~~~~~-~~~~~~~~~~~ 229 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE----IIEKL-KQGQRLPIPDN 229 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH----HHHHH-HTTEETTSBTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccc-cccccceeccc
Confidence 222 112222335567999999999889999999999999999999 678875432111 11122 22222233445
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+..+.+++..||+.+|++||+|+++++.|
T Consensus 230 ~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 230 CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 577899999999999999999999999886
No 33
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.1e-40 Score=334.96 Aligned_cols=251 Identities=23% Similarity=0.453 Sum_probs=203.3
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|+..+.||+|+||.||++.++++..+|+|.+.... ....+|.+|++++++++||||+++++++.. .+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ--QKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEcc--CCCEEEEEE
Confidence 3567778999999999999999888899999887543 234679999999999999999999999843 567899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++...+ .++|..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 80 FMENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERNS-----FIHRDLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred cCCCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccccCcceEEEcCCCeEEECCCCCccccC
Confidence 9999999999976432 4899999999999999999999887 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||++.+..++.++||||||+++|||++ |+.|+........ ...+.. ......+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~----~~~i~~-~~~~~~~~~~ 226 (256)
T cd05114 152 DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV----VEMISR-GFRLYRPKLA 226 (256)
T ss_pred CCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH----HHHHHC-CCCCCCCCCC
Confidence 433322223345567999999988889999999999999999999 8999864322111 111111 1111123334
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+.++.+++.+||+.+|++||+|.|+++.|
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 56789999999999999999999999886
No 34
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-41 Score=348.71 Aligned_cols=251 Identities=18% Similarity=0.340 Sum_probs=211.5
Q ss_pred hccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
...|.....||+|+.|.||.|.. .+++.||||++.... +...+-..+|+.+|...+|+|||.++.-|... ++.++|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhccc--ceeEEE
Confidence 35677778999999999999975 478999999998775 33445678999999999999999999877543 789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
||||++|+|.+.+.... +++.+.-.|+.+++.||+|||..+ |+|||||++|||++.++.+||+|||++..
T Consensus 349 MEym~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~g-----IiHrDIKSDnILL~~~g~vKltDFGFcaq 418 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHARG-----IIHRDIKSDNILLTMDGSVKLTDFGFCAQ 418 (550)
T ss_pred EeecCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhcc-----eeeeccccceeEeccCCcEEEeeeeeeec
Confidence 99999999999997643 899999999999999999999988 99999999999999999999999999988
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh-ccccCCCCCH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI-DRNLKGKFSE 645 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 645 (689)
+..... ......||+.|||||++....|++|+||||+|++++||+-|.+||-....... +..+. ........++
T Consensus 419 i~~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA----lyLIa~ng~P~lk~~~ 493 (550)
T KOG0578|consen 419 ISEEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPKLKNPE 493 (550)
T ss_pred cccccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH----HHHHhhcCCCCcCCcc
Confidence 766543 33456799999999999999999999999999999999999999964322111 11111 1223334566
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+..+.++..+|++.|+++||++.|+|++-
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 7788999999999999999999999999873
No 35
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-39 Score=334.04 Aligned_cols=256 Identities=23% Similarity=0.462 Sum_probs=208.4
Q ss_pred ccCCcccccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|+..+.||+|+||.||+|.++ +...||||.+..........+|.+|+.++.+++||||+++++++.. .+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCceE
Confidence 46788899999999999999875 2468999998866545556789999999999999999999998844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|.+++....+ .++|..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 82 iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~~-----i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSEMN-----YVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCcceEEEcCCCCEEECccchh
Confidence 99999999999999976543 4899999999999999999999987 999999999999999999999999999
Q ss_pred ccccC-CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 565 KLLAD-DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 565 ~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
+.... ..........++..|+|||.+.+..++.++||||||+++|||++ |..|+........ .+.+.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~ 228 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV-----IKAVEDGYRLP 228 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH-----HHHHHcCCCCC
Confidence 87752 22222222344568999999998899999999999999999998 9999854322111 11111111222
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+...+..+.+++.+|++.+|++||++.||+++|...
T Consensus 229 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 3344567899999999999999999999999999864
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.7e-40 Score=340.24 Aligned_cols=254 Identities=19% Similarity=0.297 Sum_probs=202.8
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|...+.||+|+||.||+|... +|+.||+|.+...... .....+.+|++++.+++|+||+++.+++.. .+..++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--~~~~~lv~ 79 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--KDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc--CCeEEEEE
Confidence 666789999999999999874 7999999998754322 234568899999999999999999998843 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|..++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 80 e~~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-----iiH~dikp~Nill~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05631 80 TIMNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRER-----IVYRDLKPENILLDDRGHIRISDLGLAVQI 152 (285)
T ss_pred EecCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----EEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence 99999999988865332 34899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... .....++..|+|||++.+..++.++|||||||++|||++|+.||.......... .+...+ ......++...
T Consensus 153 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 228 (285)
T cd05631 153 PEGET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE-EVDRRV-KEDQEEYSEKF 228 (285)
T ss_pred CCCCe--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH-HHHHHh-hcccccCCccC
Confidence 44321 223457889999999999999999999999999999999999996532211111 111111 11112234445
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----HHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPT-----MEAVIEELT 677 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs-----~~evl~~L~ 677 (689)
+.++.+++..||+.||++||+ +++++++-+
T Consensus 229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 667899999999999999997 899988754
No 37
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=328.43 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=197.3
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHh--ccCCCcceeEeeEEEcCC--CCeEEEEEEc
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT--SLRHENIIRLRGFCCSRG--RGECFLIYDF 489 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~--~l~H~niv~l~g~~~~~~--~~~~~lV~e~ 489 (689)
.++||+|+||.||||.+. ++.||||++... +.+.|.+|-++.+ .++|+||++++++-.... .-+++||+||
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 367999999999999997 589999999743 4567888877766 568999999998652211 3379999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC----CCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS----EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~----~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
-++|+|.+||..+. ++|....+||..+++||+|||+. +.-+|+|+|||||++||||.+|+++.|+|||||.
T Consensus 290 h~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 290 HPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred ccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 99999999998753 89999999999999999999974 3357999999999999999999999999999998
Q ss_pred cccCCce-eeeecCCCCCCCCCccccccCC-CC-----CcccchhHHHHHHHHHhCCCCcc--------hhHHHHHh---
Q 005586 566 LLADDIV-FSVLKTSAAMGYLAPEYVTTGR-FT-----ERSDIFAFGVIILQILTGSLVLT--------SSMRLAAE--- 627 (689)
Q Consensus 566 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-~~-----~ksDV~sfGvvl~elltG~~p~~--------~~~~~~~~--- 627 (689)
.+..+.. .......||.+|||||++.+.- +. .+.||||+|.|||||++.-.-.. -.+.....
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP 444 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP 444 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence 8764432 2334578999999999986632 22 46899999999999998533221 11111111
Q ss_pred -hhhhhH-hhccccCCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 628 -SATFEN-FIDRNLKGKFSE-----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 628 -~~~~~~-~~~~~~~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
...+.+ ++....++.++. ..+..+.+.+..||..||+.|.|+.=|-+++++..-
T Consensus 445 t~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 445 TLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred CHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 111222 223333444433 347789999999999999999999999888876643
No 38
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-39 Score=337.54 Aligned_cols=258 Identities=27% Similarity=0.446 Sum_probs=207.9
Q ss_pred ccCCcccccccCCcceEEEEEecC------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++|+..+.||+|+||.||+|.... ...||+|.+..........+|.+|++++.+++||||+++++++.. .+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--EQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC--CCc
Confidence 357778899999999999998642 257999999765544455689999999999999999999999843 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC------------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 550 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl 550 (689)
.+++|||+++|+|.+++...... ...+++.+.+.++.|++.||+|||+.+ ++||||||+||++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-----i~H~dlkp~Nil~ 157 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLV 157 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccccceEEE
Confidence 89999999999999999764221 135889999999999999999999987 9999999999999
Q ss_pred cCCCCeEEecccccccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhh
Q 005586 551 DQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAES 628 (689)
Q Consensus 551 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~ 628 (689)
++++.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--- 234 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--- 234 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999986543321 11222345678999999988899999999999999999998 999986432211
Q ss_pred hhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 629 ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+.+........+...+.++.+++..||+.||++||+++||+++|+.
T Consensus 235 --~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 --VIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 112222222223455667889999999999999999999999999975
No 39
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-39 Score=333.28 Aligned_cols=254 Identities=24% Similarity=0.446 Sum_probs=206.3
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|+..+.||+|+||.||+|...++..||+|.+.... ...+.|.+|+.++++++|+||+++++++. ..+..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e 81 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVT--KEEPIYIITE 81 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCCcEEEEe
Confidence 4677889999999999999998888899999987543 23568999999999999999999999884 4567899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++.... ..+++.+++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 82 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~~-----i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05072 82 YMAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERKN-----YIHRDLRAANVLVSESLMCKIADFGLARVIE 154 (261)
T ss_pred cCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccchhhEEecCCCcEEECCCccceecC
Confidence 9999999999976432 34889999999999999999999887 9999999999999999999999999998775
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||++....++.++|||||||++|||+| |+.|+......... ..+............
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~ 229 (261)
T cd05072 155 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM-----SALQRGYRMPRMENC 229 (261)
T ss_pred CCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCC
Confidence 543222223335567999999988889999999999999999999 99998643221111 111111111222334
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 230 PDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 5678999999999999999999999999874
No 40
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-39 Score=344.82 Aligned_cols=261 Identities=18% Similarity=0.317 Sum_probs=206.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||+++.+ +|..||+|.+...........|.+|++++.+++||||+++++++.. .+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEEEEEe
Confidence 57888899999999999999976 6889999998865433445689999999999999999999999854 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+. |+||||||+|||+++++.+||+|||+++..
T Consensus 83 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 154 (331)
T cd06649 83 EHMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKHQ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (331)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcCC----EEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence 9999999999997643 38899999999999999999997532 999999999999999999999999999866
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh-----------------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT----------------- 630 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~----------------- 630 (689)
.... .....++..|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 155 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 155 IDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred cccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCc
Confidence 4332 12335788899999999889999999999999999999999998532111000000
Q ss_pred ---------------------hhHhhc---cccCCCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 631 ---------------------FENFID---RNLKGKF-SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 631 ---------------------~~~~~~---~~~~~~~-~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
..+..+ ....... ......++.+++.+||+.||++||++.|++++.+.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 000000 0000000 112356789999999999999999999999998765443
No 41
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=341.88 Aligned_cols=257 Identities=21% Similarity=0.344 Sum_probs=206.7
Q ss_pred hccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~l 485 (689)
.++|...+.||.|.||.||+|+- .+|..||||+++.....-++..=.+|++.|.+++ |||||++...+.+.++ ..++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEee
Confidence 35777889999999999999985 4799999999987765555556689999999998 9999999999866533 8999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|||||+ .+|.++++.++ ..+++.....|+.||..||+|+|.+| +.|||+||+|||+.....+||+|||+||
T Consensus 88 VfE~Md-~NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk~G-----fFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHKHG-----FFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred eHHhhh-hhHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHhcC-----cccccCChhheEecccceeEeccccccc
Confidence 999995 59999998763 46999999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccc-cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh---------------
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVT-TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA--------------- 629 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~--------------- 629 (689)
....... .+....|.+|+|||++. .+-|+.+.||||+|||++|+.+-++.|.+.....+...
T Consensus 159 ev~SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 159 EVRSKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred ccccCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 8765432 33445678899999975 56789999999999999999999988865432221111
Q ss_pred --hhhHhhccccC---C----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 630 --TFENFIDRNLK---G----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 630 --~~~~~~~~~~~---~----~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+...+.-.+. + ..-..++.++.+++.+|+++||.+|||++|.+++.
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 01111111111 0 01123678899999999999999999999999875
No 42
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-39 Score=351.73 Aligned_cols=263 Identities=25% Similarity=0.414 Sum_probs=208.5
Q ss_pred hccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGR 480 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~ 480 (689)
.++|...+.||+|+||.||+|... .+..||||++.........+.|.+|+++++++. |||||+++++|. ..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--KS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc--cC
Confidence 456778899999999999999853 235799999976554445578999999999996 999999999994 35
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCC--------------------------------------------------------
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEG-------------------------------------------------------- 504 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~-------------------------------------------------------- 504 (689)
...++||||+++|+|.++|+....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 789999999999999999875321
Q ss_pred ------------------------------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCce
Q 005586 505 ------------------------------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKV 548 (689)
Q Consensus 505 ------------------------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~Ni 548 (689)
....++|..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----ivH~dikp~Ni 268 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-----CVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCChHhE
Confidence 0124788999999999999999999987 99999999999
Q ss_pred eecCCCCeEEecccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHH
Q 005586 549 LIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAA 626 (689)
Q Consensus 549 Ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~ 626 (689)
|+++++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~- 347 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS- 347 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-
Confidence 9999999999999999866433221 1122335677999999988899999999999999999997 888886432111
Q ss_pred hhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 627 ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
.+...+........+...+..+.+++.+||+.||++||++.+|+++|+...|
T Consensus 348 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 ---TFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111112222222344556789999999999999999999999999998765
No 43
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-39 Score=332.32 Aligned_cols=254 Identities=22% Similarity=0.423 Sum_probs=207.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|...+.||+|+||.||+|..+ .++.||+|++... .....+|.+|++++.+++|+||+++++++.. ....++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 82 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYIITE 82 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcC--CCCcEEEEE
Confidence 4666789999999999999976 5889999998754 3345679999999999999999999999854 467899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++..... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 83 ~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~-----i~H~dlkp~nil~~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 83 FMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKKN-----FIHRDLAARNCLVGENHLVKVADFGLSRLMT 155 (263)
T ss_pred eCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----EeecccCcceEEEcCCCcEEeCCCccccccc
Confidence 9999999999976432 34899999999999999999999987 9999999999999999999999999998776
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
............+.+|+|||++.+..++.++|||||||++|||+| |..|+....... ..+.+........+...
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 230 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKGYRMERPEGC 230 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCC
Confidence 543322222334567999999998899999999999999999998 888886432211 11112222233344455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.++.+++.+||+.+|++||++.|++++|+..
T Consensus 231 ~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 231 PPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 67899999999999999999999999999763
No 44
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.7e-39 Score=332.02 Aligned_cols=255 Identities=24% Similarity=0.454 Sum_probs=208.4
Q ss_pred hccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.++|...+.||+|+||.||+|...+++.||+|.++... ...++|.+|++++++++||||+++++++.. .+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL--EEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEec--CCCeeeee
Confidence 35677889999999999999998888899999987653 235679999999999999999999998844 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... ...++|..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 81 ELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN-----YIHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred ecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 9999999999997654 235899999999999999999999987 999999999999999999999999999877
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
.............+..|+|||++.+..++.++||||||+++|||+| |+.|+........ ...++.......+..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (261)
T cd05068 154 KEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV-----LQQVDQGYRMPCPPG 228 (261)
T ss_pred cCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCc
Confidence 5432222222223457999999998899999999999999999999 9988865322111 111222222233445
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.+..+.+++.+|++.+|++||++.++++.|++
T Consensus 229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 229 CPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 56789999999999999999999999999975
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-40 Score=321.60 Aligned_cols=260 Identities=18% Similarity=0.312 Sum_probs=209.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchH-HHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSE-EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.|+..+.|++|.||.||+|+.+ ++..||+|+++....+.. .-.-.+||.+|.+++|||||.+..+.....-+..|+||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 4666789999999999999976 789999999987653322 24568999999999999999999999888888999999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|||+. ||...++... +++...++..++.|+++|++|||... |+|||||++|+|+++.|.+||+|||+||.+
T Consensus 157 e~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~w-----ilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDNW-----ILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred HHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhce-----eEecccchhheeeccCCcEEecccchhhhh
Confidence 99975 9999998754 45888999999999999999999988 999999999999999999999999999988
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh------hcc---
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF------IDR--- 637 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~------~~~--- 637 (689)
.... .+.+....|.+|+|||.+.+. .|++..|+||+|||+.||+++++.|.+.....+...++..+ +-+
T Consensus 228 gsp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 228 GSPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred cCCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7642 234455678899999998775 58999999999999999999998886554333322222111 000
Q ss_pred ----------------ccCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 638 ----------------NLKGKFSES-EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 638 ----------------~~~~~~~~~-~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.++..+... .++.-.+++...+..||++|-|+.|.+++=+..
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~ 365 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR 365 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence 011111111 346778899999999999999999999886554
No 46
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-39 Score=345.27 Aligned_cols=263 Identities=23% Similarity=0.405 Sum_probs=207.4
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 481 (689)
++|...+.||+|+||.||+|... +++.||+|+++..........+.+|+.++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-GG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-CC
Confidence 46778899999999999999742 35789999997654344456788999999999 899999999988643 45
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCC--------------------------------------------------------
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGS-------------------------------------------------------- 505 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~-------------------------------------------------------- 505 (689)
..+++|||+++|+|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 788999999999999998643210
Q ss_pred -CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee-eeecCCCCCC
Q 005586 506 -SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMG 583 (689)
Q Consensus 506 -~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~ 583 (689)
...++|..+.+++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.+...... ......++..
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~-----ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK-----CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 125899999999999999999999987 999999999999999999999999999876433211 1122334567
Q ss_pred CCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCC
Q 005586 584 YLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHED 662 (689)
Q Consensus 584 y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~d 662 (689)
|+|||++.+..++.++|||||||++|||++ |+.||...... ..+...+........+.....++.+++.+||+.+
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~ 316 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID----EEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNN 316 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc----HHHHHHHhccCCCCCCccCCHHHHHHHHHHccCC
Confidence 999999999999999999999999999998 99998542111 1111222222222233445667999999999999
Q ss_pred CCCCCCHHHHHHHHHhhCC
Q 005586 663 PENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 663 p~~RPs~~evl~~L~~~~p 681 (689)
|++||++.||+++|+.+.+
T Consensus 317 p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 317 PEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999988654
No 47
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-40 Score=339.95 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=208.6
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCe
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 482 (689)
.-++|...+.||+|+|++|++|+.+ .+++||||++.+.-. +...+-...|-.+|.+| .||.|++|+--| .+...
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF--QD~~s 148 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF--QDEES 148 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe--ecccc
Confidence 3467888999999999999999865 699999999976542 22334566788889999 899999998777 44578
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
+|+|+||.+||+|.++++..+ .+++.....+|.+|+.||+|||+.| ||||||||+|||||+|+++||+|||
T Consensus 149 LYFvLe~A~nGdll~~i~K~G----sfde~caR~YAAeIldAleylH~~G-----IIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG----SFDETCARFYAAEILDALEYLHSNG-----IIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHHhcC-----ceeccCChhheeEcCCCcEEEeecc
Confidence 999999999999999999875 3899999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCcee----------ee--ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh
Q 005586 563 LHKLLADDIVF----------SV--LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT 630 (689)
Q Consensus 563 la~~~~~~~~~----------~~--~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~ 630 (689)
-|+.+.+.... .. ....||..|.+||++.....+..+|+|+|||+||.|+.|++||...... ..
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----li 295 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LI 295 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HH
Confidence 99988643211 11 2245888999999999999999999999999999999999999765443 33
Q ss_pred hhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 631 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+.++++-.. .+++.-++.+.+|+.+-+..||.+|++.+|+-+|.
T Consensus 296 FqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 296 FQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 444443322 23444456788899999999999999999997664
No 48
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.8e-39 Score=329.56 Aligned_cols=251 Identities=25% Similarity=0.449 Sum_probs=203.5
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
+|...+.||+|+||.||+|...++..+|+|.+.... ....+|.+|+.++.+++||||+++++++.. .+..++||||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~ 80 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYIVTEY 80 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEEEEEc
Confidence 466778999999999999998877789999987543 234679999999999999999999999843 4678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+++..... .++|..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||.++....
T Consensus 81 ~~~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~ 152 (256)
T cd05113 81 MSNGCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLESKQ-----FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD 152 (256)
T ss_pred CCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccCcceEEEcCCCCEEECCCccceecCC
Confidence 999999999976432 4899999999999999999999987 99999999999999999999999999987654
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
..........++..|+|||...+..++.++|||||||++|||+| |+.|+........ ...+. ...+...+...+
T Consensus 153 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~ 227 (256)
T cd05113 153 DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET----VEKVS-QGLRLYRPHLAS 227 (256)
T ss_pred CceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----HHHHh-cCCCCCCCCCCC
Confidence 43323333345667999999988889999999999999999999 9999854322111 11111 111112233346
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..+.+++.+||+.+|++||++.++++.|+
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 78999999999999999999999998874
No 49
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.8e-39 Score=333.58 Aligned_cols=260 Identities=22% Similarity=0.387 Sum_probs=205.9
Q ss_pred HhccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 480 (689)
++++|+..+.||+|+||.||+|..+ .+..||+|++..........+|.+|+.++++++||||+++++++. ..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--QG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--CC
Confidence 4567888999999999999999753 356799999875543445567999999999999999999999984 35
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCC------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGS------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 554 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~ 554 (689)
...++||||+++|+|.++++..... ...++|..++.++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-----~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDF 156 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCcchheEEEcCCC
Confidence 6789999999999999999753321 234788999999999999999999877 99999999999999999
Q ss_pred CeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhh
Q 005586 555 NPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFE 632 (689)
Q Consensus 555 ~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~ 632 (689)
.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..|+........ ..
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~----~~ 232 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQV----LR 232 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH----HH
Confidence 99999999998664432211 112234667999999998889999999999999999999 6888754322111 11
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 633 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.... ......+...+..+.+++.+|++.+|++||++.|++++|++
T Consensus 233 ~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVME-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHc-CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111 11112334456689999999999999999999999999863
No 50
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.2e-39 Score=333.33 Aligned_cols=259 Identities=24% Similarity=0.424 Sum_probs=205.7
Q ss_pred CcccccccCCcceEEEEEe-----cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 412 SEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
...+.||+|+||.||++.. .++..||+|.+...........|.+|++++++++||||+++++++........++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778999999999988653 36789999999765433455788999999999999999999999876555678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++... .++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 87 ~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQH-----YIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred ecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999753 3899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceee--eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH----------hhhhhhHh
Q 005586 567 LADDIVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA----------ESATFENF 634 (689)
Q Consensus 567 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~----------~~~~~~~~ 634 (689)
........ .....++..|+|||.+.+..++.++||||||+++|||+||+.|+........ ......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 65432111 1112344569999999888899999999999999999999999753211100 00111222
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 635 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 635 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
++.......+...+.++.+++..||+.+|++||++++|++.|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2222222233445678999999999999999999999999998763
No 51
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.3e-40 Score=338.60 Aligned_cols=249 Identities=20% Similarity=0.350 Sum_probs=210.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|...+.||+|.||.||||+-+ +.+.||+|.+.+... +++.+...+|++++++++|||||.++++| +...+.++|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf--Et~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF--ETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh--cccceEEEE
Confidence 46777889999999999999876 689999999977653 44567899999999999999999999998 566899999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
.||+.+ +|..+|.... .+++..+..|+.++..||.|||+.+ |+|||+||.|||+++.+.+|++|||+||.
T Consensus 80 te~a~g-~L~~il~~d~----~lpEe~v~~~a~~LVsaL~yLhs~r-----ilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDG----KLPEEQVRAIAYDLVSALYYLHSNR-----ILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred ehhhhh-hHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhcC-----cccccCCcceeeecCCCceeechhhhhhh
Confidence 999976 9999998764 3999999999999999999999987 99999999999999999999999999998
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
+..+.. -.....||+-|||||.+.++.|+..+|.||+||++||+++|++||....-... .+.+.... ...+..
T Consensus 150 m~~~t~-vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L----v~~I~~d~--v~~p~~ 222 (808)
T KOG0597|consen 150 MSTNTS-VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL----VKSILKDP--VKPPST 222 (808)
T ss_pred cccCce-eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH----HHHHhcCC--CCCccc
Confidence 876543 33456799999999999999999999999999999999999999965321111 11111111 123456
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+..+..+...-+.+||.+|.+-.+++++-
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 677899999999999999999999998764
No 52
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-39 Score=334.46 Aligned_cols=265 Identities=23% Similarity=0.395 Sum_probs=211.0
Q ss_pred cCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
+|...+.||+|+||.||+|... ++..+++|.+.... ....+.|.+|++.+++++|+||+++++++.. .+..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 82 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGD--GDPL 82 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--CCce
Confidence 4666789999999999999753 35678999886544 3344679999999999999999999999844 5678
Q ss_pred EEEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec
Q 005586 484 FLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 551 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~ 551 (689)
++||||+++++|.+++..... ....++|..+++++.|++.||+|||+.+ |+||||||+||+++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-----i~H~dlkp~Nil~~ 157 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-----FVHRDLATRNCLVG 157 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeecccCcceEEEc
Confidence 999999999999999975431 1234899999999999999999999987 99999999999999
Q ss_pred CCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 005586 552 QQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 629 (689)
Q Consensus 552 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~ 629 (689)
+++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||+| |+.|+........
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--- 234 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV--- 234 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---
Confidence 99999999999998664432211 122334677999999998899999999999999999999 9999854322111
Q ss_pred hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcccccc
Q 005586 630 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 687 (689)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~ 687 (689)
.+.+........+...+..+.+++.+||+.+|++||++.+|+++|+......+.|+
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~~~~ 290 (291)
T cd05094 235 --IECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATPIYL 290 (291)
T ss_pred --HHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcCccc
Confidence 11111221222233456789999999999999999999999999999987777653
No 53
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=313.45 Aligned_cols=237 Identities=22% Similarity=0.370 Sum_probs=201.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||.|+||.|.+++.+ +|..+|+|++.+.... +..+.-.+|..+|+.+.||+++++++-+ .+.+..++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~--~d~~~lym 121 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF--KDNSNLYM 121 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee--ccCCeEEE
Confidence 35667789999999999999986 6899999999876532 2345678899999999999999999888 55689999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|-|..+|+..+ .++......+|.||+.||+|||+.+ |++|||||+|||||.+|.+||+|||+|+
T Consensus 122 vmeyv~GGElFS~Lrk~~----rF~e~~arFYAAeivlAleylH~~~-----iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSG----RFSEPHARFYAAEIVLALEYLHSLD-----IIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred EEeccCCccHHHHHHhcC----CCCchhHHHHHHHHHHHHHHHHhcC-----eeeccCChHHeeeccCCcEEEEeccceE
Confidence 999999999999999765 3889999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
.+... .....||+.|+|||.+.+..+..++|.|||||++|||+.|.+||.++.... .++.++...+ .+|.
T Consensus 193 ~v~~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----iY~KI~~~~v--~fP~ 262 (355)
T KOG0616|consen 193 RVSGR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----IYEKILEGKV--KFPS 262 (355)
T ss_pred EecCc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH----HHHHHHhCcc--cCCc
Confidence 88764 334568999999999999999999999999999999999999998775532 3333433332 3555
Q ss_pred HHHHHHHHHHHHhccCCCCCC
Q 005586 646 SEAAKLGKMALVCTHEDPENR 666 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~R 666 (689)
--..++.+|+..-++.|-.+|
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhh
Confidence 556677888888888888888
No 54
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.7e-39 Score=328.61 Aligned_cols=250 Identities=23% Similarity=0.444 Sum_probs=202.4
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
+|+..+.||+|+||.||+|..+++..+|+|.+.... ....+|.+|++++++++||||+++++++. ..+..++||||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~e~ 80 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCT--KQRPIFIVTEY 80 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEc--CCCceEEEEec
Confidence 466678999999999999998877889999986543 23357889999999999999999999884 34678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++++|.++++.... .++|..++.|+.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...+
T Consensus 81 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 81 MANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESNG-----FIHRDLAARNCLVGEDNVVKVSDFGLARYVLD 152 (256)
T ss_pred CCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHCC-----cccccccHhhEEECCCCcEEECCcccceeccc
Confidence 999999999976432 4899999999999999999999987 99999999999999999999999999987654
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
...........+..|+|||++.+..++.++|||||||++|||+| |+.|+........ . +.+........+...+
T Consensus 153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----~-~~~~~~~~~~~~~~~~ 227 (256)
T cd05059 153 DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV----V-ESVSAGYRLYRPKLAP 227 (256)
T ss_pred ccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH----H-HHHHcCCcCCCCCCCC
Confidence 33222222334457999999998899999999999999999999 7888854322111 1 1111122222333456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.++.+++.+||+.+|++||+|.|++++|
T Consensus 228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 7899999999999999999999999987
No 55
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.7e-39 Score=331.63 Aligned_cols=262 Identities=24% Similarity=0.423 Sum_probs=210.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|+||.||+|.+. +|. .||+|.+..........++.+|+.++..++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---STV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---CCc
Confidence 46777899999999999999864 444 4899998766545556789999999999999999999999853 457
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++++||+++|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~-----iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLEEVR-----LVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred EEEEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccccceEEEcCCCcEEECCCCc
Confidence 89999999999999997643 24899999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++.+...... ......++..|+|||...+..++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~ 230 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-----IPDLLEKGERL 230 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCcC
Confidence 9876533221 1222334567999999988899999999999999999998 888886432211 11222222222
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccccc
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATF 686 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~ 686 (689)
..+...+.++.+++..||+.||++||++.|+++.|+..+.....|
T Consensus 231 ~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05109 231 PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF 275 (279)
T ss_pred CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence 223445678899999999999999999999999999887766554
No 56
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.7e-39 Score=331.96 Aligned_cols=262 Identities=26% Similarity=0.453 Sum_probs=205.5
Q ss_pred ccCCcccccccCCcceEEEEEec-----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|+||.||+|..+ ++..||+|++.... ....+.|.+|++++++++||||+++++++...+....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46777899999999999999753 58899999987654 3445689999999999999999999998866555678
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH~~~-----i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLGSKR-----YVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCHhhEEECCCCeEEECCCcc
Confidence 99999999999999997543 24899999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCceeeee--cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh-----------hhh
Q 005586 564 HKLLADDIVFSVL--KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE-----------SAT 630 (689)
Q Consensus 564 a~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~-----------~~~ 630 (689)
++.+......... ...++..|+|||++.+..++.++|||||||++|||++|..+.......... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 9876543221111 112334599999998888999999999999999999987765332111000 001
Q ss_pred hhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 631 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.+.+........+...+.++.+++.+||+.+|++|||+.||++.|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1122222222222334466899999999999999999999999999865
No 57
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.2e-39 Score=331.07 Aligned_cols=256 Identities=25% Similarity=0.509 Sum_probs=210.7
Q ss_pred HhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.++|+..+.||+|+||.||+|..+++..+|+|.+.... .....++..|+.++.+++|+||+++++++.. ....++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--GEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEec--CCCeEEE
Confidence 345677889999999999999999889999999987654 3345678999999999999999999999854 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.++++...+ ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++..
T Consensus 81 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~~-----i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQN-----SIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred EeecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccCcceEEEcCCceEEEccccchhh
Confidence 999999999999986543 35899999999999999999999887 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |+.|+....... .+.. +....+...+.
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~----~~~~-~~~~~~~~~~~ 227 (261)
T cd05148 154 IKEDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE----VYDQ-ITAGYRMPCPA 227 (261)
T ss_pred cCCcccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH----HHHH-HHhCCcCCCCC
Confidence 6543322 223345667999999988899999999999999999998 888885432111 1111 12222333445
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+..+.+++.+||+.||++||+++++++.|+.
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 566789999999999999999999999999975
No 58
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.4e-39 Score=325.04 Aligned_cols=248 Identities=26% Similarity=0.484 Sum_probs=201.4
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCC
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGK 494 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gs 494 (689)
++||+|+||.||+|..+++..||+|++...........|.+|++++++++||||+++++++.. .+..++||||+++|+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--RQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec--CCccEEEEECCCCCc
Confidence 369999999999999888999999998765544445679999999999999999999999854 467899999999999
Q ss_pred HHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceee
Q 005586 495 LSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 574 (689)
Q Consensus 495 L~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 574 (689)
|.+++..... .++|..++.++.|++.||.|+|+.+ ++||||||+||++++++.+||+|||+++.........
T Consensus 79 L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 79 FLSFLRKKKD---ELKTKQLVKFALDAAAGMAYLESKN-----CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred HHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----eeecccChheEEEcCCCeEEECCCccceecccccccc
Confidence 9999875432 4889999999999999999999887 9999999999999999999999999987654332211
Q ss_pred eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 575 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 575 ~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......+..|+|||++.+..++.++||||||+++||+++ |..||........ ...+........+...+.++.+
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 225 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-----REQVEKGYRMSCPQKCPDDVYK 225 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHH
Confidence 112233567999999998899999999999999999998 9989864322211 1111122222334445678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHH
Q 005586 654 MALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
++.+|++.+|++||++.|++++|.
T Consensus 226 li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 226 VMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999875
No 59
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7e-39 Score=325.67 Aligned_cols=249 Identities=25% Similarity=0.461 Sum_probs=200.2
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
+.||+|+||.||+|..+ +++.||+|.+...........|.+|++++++++||||++++++|.. ....++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEEEeeccCC
Confidence 36999999999999975 7899999988755434455689999999999999999999999854 46789999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.++++... ..++|.+++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 79 ~L~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~-----i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 79 DFLTFLRTEG---PRLKVKELIQMVENAAAGMEYLESKH-----CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred cHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 9999997543 24899999999999999999999887 999999999999999999999999999865433211
Q ss_pred eee-cCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHH
Q 005586 574 SVL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKL 651 (689)
Q Consensus 574 ~~~-~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 651 (689)
... ....+..|+|||.+.++.++.++|||||||++|||++ |..|+...... .....+........+...+.++
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 225 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----QTREAIEQGVRLPCPELCPDAV 225 (252)
T ss_pred ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----HHHHHHHcCCCCCCcccCCHHH
Confidence 111 1122356999999998899999999999999999998 88888543211 1122222222333444556789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 652 GKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 652 ~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.+++.+|++.+|++||++.||+++|+.
T Consensus 226 ~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 226 YRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 999999999999999999999999863
No 60
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.6e-39 Score=334.10 Aligned_cols=261 Identities=23% Similarity=0.430 Sum_probs=209.2
Q ss_pred HhccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
..++|+..+.||+|+||.||++... ....+|+|.+..........++.+|++++.++ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 3456778899999999999999864 23689999998655445556799999999999 89999999999844
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcC------------CCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
.+..++||||+++|+|.++++... .....++|..+++++.|++.||+|||+.+ |+||||||+|
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-----ivH~dlkp~N 162 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-----CIHRDLAARN 162 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-----ccccccceee
Confidence 567899999999999999997532 12345899999999999999999999887 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
|++++++.+||+|||+++.+....... .....++..|+|||++.+..++.++|||||||++|||++ |..|+.......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 999999999999999998765433211 122234567999999988899999999999999999998 888885432111
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
..+.+........+......+.+++.+|+..+|++|||+.|++++|+..
T Consensus 243 -----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 243 -----LFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred -----HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1122222222234445567899999999999999999999999999875
No 61
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-39 Score=338.70 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=203.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|..+ +|+.||+|++..... ......+.+|++++.+++||||+++++++. +....++|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv 79 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--DQRFLYML 79 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc--cCCeEEEE
Confidence 6778899999999999999976 689999999875431 223457889999999999999999998874 45789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 80 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~NIli~~~~~~kl~Dfg~~~~ 150 (291)
T cd05612 80 MEYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSKE-----IVYRDLKPENILLDKEGHIKLTDFGFAKK 150 (291)
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCHHHeEECCCCCEEEEecCcchh
Confidence 99999999999997643 4889999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
..... ....++..|+|||++.+..++.++|||||||++|||+||+.||....... ....+.... ..++..
T Consensus 151 ~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~--~~~~~~ 220 (291)
T cd05612 151 LRDRT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG----IYEKILAGK--LEFPRH 220 (291)
T ss_pred ccCCc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC--cCCCcc
Confidence 65422 12357888999999998889999999999999999999999996542211 112222111 123334
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHh
Q 005586 647 EAAKLGKMALVCTHEDPENRPT-----MEAVIEELTV 678 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs-----~~evl~~L~~ 678 (689)
....+.+++.+|++.||.+||+ +.|++++.+.
T Consensus 221 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 257 (291)
T cd05612 221 LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257 (291)
T ss_pred CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence 4567899999999999999995 9999888654
No 62
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.9e-39 Score=330.69 Aligned_cols=262 Identities=21% Similarity=0.365 Sum_probs=211.1
Q ss_pred hccCCcccccccCCcceEEEEEecC-----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRD-----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
.++|...+.||+|+||.||+|...+ +..|++|++...........+.+|+.++.+++|+||+++++++... ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CCC
Confidence 4567788999999999999999865 7889999987655445567899999999999999999999998653 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC----CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEE
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS----SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 558 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl 558 (689)
.++++||+++|+|.+++...... ...+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-----VIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccCHhhEEEcCCCcEEE
Confidence 89999999999999999764322 145899999999999999999999887 999999999999999999999
Q ss_pred ecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhc
Q 005586 559 ADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 636 (689)
+|||+++.+....... .....++..|+|||++.+..++.++|||||||++||+++ |+.|+....... +...+.
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~ 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-----MAAYLK 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-----HHHHHH
Confidence 9999998764432211 122345667999999988889999999999999999999 999986532211 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 637 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 637 ~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.......+...+.++.+++.+||+.||++||++.||++.|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 234 DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 12222223334567899999999999999999999999998764
No 63
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=340.71 Aligned_cols=254 Identities=25% Similarity=0.465 Sum_probs=219.0
Q ss_pred cCCcccccccCCcceEEEEEecC-----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRD-----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
.....++||.|-||.||+|.+.+ .-.||||.-+.+......+.|+.|..+|++++|||||+|+|+|.+ ...+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e---~P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---QPMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---ccee
Confidence 33446799999999999998642 345899998887666677899999999999999999999999965 5789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+|||..+-|-|..||+.+.. .|+..+...++.||..||+|||+.. +|||||.++|||+.....+|++|||++
T Consensus 467 ivmEL~~~GELr~yLq~nk~---sL~l~tL~ly~~Qi~talaYLeSkr-----fVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKD---SLPLRTLTLYCYQICTALAYLESKR-----FVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred EEEecccchhHHHHHHhccc---cchHHHHHHHHHHHHHHHHHHHhhc-----hhhhhhhhhheeecCcceeeecccchh
Confidence 99999999999999987653 4888899999999999999999987 899999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
|.+.++.+++.....-++.|||||.+.-++++.+||||-|||++||+++ |..||..... .+.-..+...-+...
T Consensus 539 R~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----sDVI~~iEnGeRlP~ 613 (974)
T KOG4257|consen 539 RYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----SDVIGHIENGERLPC 613 (974)
T ss_pred hhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----cceEEEecCCCCCCC
Confidence 9999988888777777889999999999999999999999999999986 8899965322 112222333445567
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
|+.|+..+..++.+||+.||.+||.+.|+...|..+
T Consensus 614 P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 614 PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred CCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 888999999999999999999999999998877654
No 64
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.6e-39 Score=341.37 Aligned_cols=245 Identities=23% Similarity=0.332 Sum_probs=198.0
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
+.||+|+||.||+|+.+ +|+.||+|+++.... ......+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCC
Confidence 36999999999999875 789999999975432 2334578899999999999999999998844 578999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
+|+|.+++.... .+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~-----ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 79 GGELFFHLSRER----VFSEDRARFYGAEIVSALGYLHSCD-----VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC
Confidence 999999997643 4889999999999999999999988 9999999999999999999999999987542211
Q ss_pred eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKL 651 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 651 (689)
. ......++..|+|||.+.+..++.++|||||||++|||+||+.||........ ...+... ...++.....++
T Consensus 150 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----~~~~~~~--~~~~p~~~~~~~ 222 (323)
T cd05571 150 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--EIRFPRTLSPEA 222 (323)
T ss_pred C-cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHH
Confidence 1 11223578899999999998999999999999999999999999965322111 1111111 112344456678
Q ss_pred HHHHHHhccCCCCCCC-----CHHHHHHHHH
Q 005586 652 GKMALVCTHEDPENRP-----TMEAVIEELT 677 (689)
Q Consensus 652 ~~l~~~Cl~~dp~~RP-----s~~evl~~L~ 677 (689)
.+++.+|++.||++|| ++.+++++-+
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~ 253 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcCCC
Confidence 9999999999999999 8999987643
No 65
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.7e-39 Score=330.65 Aligned_cols=257 Identities=24% Similarity=0.424 Sum_probs=206.2
Q ss_pred ccCCcccccccCCcceEEEEEecC------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++|...+.||+|+||.||+|...+ +..||+|.++..........|.+|++++.+++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE--GDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec--CCC
Confidence 356777899999999999998643 478999999876544456789999999999999999999999854 477
Q ss_pred EEEEEEcCCCCCHHHHhhhcCC----------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEG----------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
.++||||+++|+|.+++..... ....+++.....++.|++.|++|||+.+ ++||||||+||+++.
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-----i~h~dlkp~nili~~ 157 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-----FVHRDLATRNCLVGY 157 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-----eeccccccceEEEcC
Confidence 9999999999999999976432 2245889999999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhh
Q 005586 553 QFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESAT 630 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~ 630 (689)
++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~----- 232 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE----- 232 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----
Confidence 9999999999998654322211 122334577999999999999999999999999999999 999985432111
Q ss_pred hhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 631 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..+.+........+...+..+.+++..||+.||++||++.||++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111111122223445678999999999999999999999999885
No 66
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.2e-39 Score=345.05 Aligned_cols=252 Identities=22% Similarity=0.349 Sum_probs=196.0
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
|...+.||+|+||.||+|... +|+.||||++...........|.+|++++++++|+||+++++++. ..+..++||||
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~ 153 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD--HNGEIQVLLEF 153 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec--cCCeEEEEEec
Confidence 344678999999999999875 689999999976554445578999999999999999999999984 45789999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+.. ..++.....|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRRH-----IVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHCC-----EeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 9999986532 2466778899999999999999987 99999999999999999999999999987643
Q ss_pred CceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
... ......++..|+|||++.. ...+.++|||||||++|||++|+.||...... .+...... +........+
T Consensus 221 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~ 297 (353)
T PLN00034 221 TMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DWASLMCA-ICMSQPPEAP 297 (353)
T ss_pred ccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHHHH-HhccCCCCCC
Confidence 321 1223457889999998743 22356899999999999999999999632110 00011111 1111112233
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.....++.+++.+||+.||++||++.|++++-+...
T Consensus 298 ~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 298 ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 445678999999999999999999999999865543
No 67
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-39 Score=334.36 Aligned_cols=256 Identities=19% Similarity=0.312 Sum_probs=199.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|...+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|++++.+++||||+++++++.. .+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 36788899999999999999986 688999999976532 2334578899999999999999999998843 5789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||++++.+..+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~-----i~H~dlkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 79 FEYVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKND-----IVHRDIKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred EecCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence 9999988776554322 24889999999999999999999887 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh------------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF------------ 634 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~------------ 634 (689)
.............++..|+|||++.+..++.++|||||||++|||++|+.||.......... .+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF-TIQKVLGPLPAEQMKLF 228 (287)
T ss_pred ccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHhh
Confidence 65433222233457888999999998889999999999999999999999996432111000 00000
Q ss_pred -hcccc--------CC------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 635 -IDRNL--------KG------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 635 -~~~~~--------~~------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.++.. .. ......+..+.+++.+|++.||++|||++|++++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp 285 (287)
T cd07848 229 YSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285 (287)
T ss_pred hccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 00000 00 00112355799999999999999999999999763
No 68
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1e-38 Score=331.32 Aligned_cols=266 Identities=23% Similarity=0.387 Sum_probs=210.1
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++|...+.||+|+||.||++... ++..+|+|.+.... ......|.+|++++.+++||||+++++++.. .+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVE--GDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCc
Confidence 46777899999999999999852 35678999887554 3445679999999999999999999999854 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCC---------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEG---------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 553 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~---------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~ 553 (689)
.++||||+++++|.+++..... ....++|..++.++.|++.||+|||+.+ ++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-----i~H~dlkp~Nili~~~ 156 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-----FVHRDLATRNCLVGEN 156 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeecccCcceEEEccC
Confidence 8999999999999999975431 1234899999999999999999999987 9999999999999999
Q ss_pred CCeEEecccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhh
Q 005586 554 FNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATF 631 (689)
Q Consensus 554 ~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~ 631 (689)
+.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||+| |+.|+........ .
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~----~ 232 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV----I 232 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH----H
Confidence 99999999999866433221 1122334668999999988889999999999999999999 8888864322111 1
Q ss_pred hHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcccccc
Q 005586 632 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 687 (689)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~ 687 (689)
..+. .......+...+.++.+++.+||+.+|.+||++.||++.|+......+.|+
T Consensus 233 ~~i~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~~ 287 (288)
T cd05093 233 ECIT-QGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVYL 287 (288)
T ss_pred HHHH-cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhccccc
Confidence 1111 111111222345679999999999999999999999999998876666553
No 69
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.6e-39 Score=329.59 Aligned_cols=258 Identities=21% Similarity=0.437 Sum_probs=206.1
Q ss_pred hccCCcccccccCCcceEEEEEecC------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
+++|...+.||+|+||.||+|.+.+ +..||+|.+...........|.+|+.++++++|+||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--RL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CC
Confidence 4668888999999999999998753 578999988765544556689999999999999999999998854 45
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCC---CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC---C
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGS---SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF---N 555 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~---~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~---~ 555 (689)
..++||||+++|+|.++++..... ...++|..++.++.||+.||+|||+.+ ++||||||+||+++.++ .
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-----ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-----FIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccchheEEEeccCCCcc
Confidence 678999999999999999765321 235899999999999999999999987 99999999999998754 5
Q ss_pred eEEecccccccccCCceeee-ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhH
Q 005586 556 PLIADCGLHKLLADDIVFSV-LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 633 (689)
+||+|||+++.......... .....+..|+|||++.+..++.++|||||||++|||++ |+.||....... ..+
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-----~~~ 232 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-----VME 232 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHH
Confidence 89999999987643322111 11223457999999998899999999999999999997 999986532211 122
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.+........+...+..+.+++.+|++.+|++||++.+|+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22222233334455678999999999999999999999999986
No 70
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=342.68 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=202.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+|+.+ +|+.||+|++..... ......+.+|++++.+++||||+++++++.. .+..++
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 95 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRVYF 95 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEEEE
Confidence 45777899999999999999986 689999999975431 2334678999999999999999999998854 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 96 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLHSKD-----IIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred EEcCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCHHHEEECCCCCEEEeeccCce
Confidence 999999999999997643 3788889999999999999999987 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
....... ...++..|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... ..++.
T Consensus 167 ~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~~--~~~p~ 236 (329)
T PTZ00263 167 KVPDRTF----TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI----YEKILAGR--LKFPN 236 (329)
T ss_pred EcCCCcc----eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH----HHHHhcCC--cCCCC
Confidence 7654321 23578889999999998999999999999999999999999965422111 11222111 12233
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPT-----MEAVIEELT 677 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs-----~~evl~~L~ 677 (689)
....++.+++..||+.||++||+ +.+++.+.+
T Consensus 237 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 237 WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 34567889999999999999996 788887754
No 71
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-38 Score=330.26 Aligned_cols=257 Identities=25% Similarity=0.431 Sum_probs=203.8
Q ss_pred cCCcccccccCCcceEEEEEe-----cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|+..+.||+|+||.||+|.. .++..||+|.+..........+|.+|++++++++||||+++++++.. ....+
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~ 83 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ--EQPVC 83 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec--CCceE
Confidence 466778999999999999985 25688999999865444455689999999999999999999999844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec
Q 005586 485 LIYDFAPKGKLSKYLDQEEG-------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 551 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~ 551 (689)
+||||+++|+|.+++..... ....+++.+.+.++.|++.||+|||+.+ |+||||||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-----i~H~dlkp~nili~ 158 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-----FVHKDLAARNILIG 158 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-----eehhccccceEEEc
Confidence 99999999999999964321 1234889999999999999999999987 99999999999999
Q ss_pred CCCCeEEecccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 005586 552 QQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 629 (689)
Q Consensus 552 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~ 629 (689)
+++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..|+......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~----- 233 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ----- 233 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 9999999999999876433211 1122234567999999988889999999999999999999 88888543221
Q ss_pred hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 630 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+.++.......+...+.++.+++.+|++.||++||++.+|.++|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111222221122334456678999999999999999999999999863
No 72
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.2e-39 Score=341.45 Aligned_cols=254 Identities=17% Similarity=0.246 Sum_probs=203.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|++++.+++||||+++++++. ..+..++|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--~~~~~~lv 79 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--DDEYLYLA 79 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE--cCCEEEEE
Confidence 5788899999999999999986 589999999975432 234467889999999999999999999884 35789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 80 ~e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~ 150 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHELG-----YIHRDLKPENFLIDASGHIKLTDFGLSKG 150 (333)
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence 99999999999997543 3889999999999999999999987 99999999999999999999999999986
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh--hhHhhccccCCCCC
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT--FENFIDRNLKGKFS 644 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 644 (689)
... ......++..|+|||++.+..++.++|||||||++|||++|+.||............ ....+.........
T Consensus 151 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 226 (333)
T cd05600 151 IVT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPR 226 (333)
T ss_pred ccc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccc
Confidence 543 122345788999999999989999999999999999999999999653221111100 00111111000001
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+.++.+++..|+..+|++||++.|++++.+.
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~ 260 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFF 260 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhCccc
Confidence 1346678899999999999999999999987543
No 73
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-39 Score=337.94 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=207.6
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc----hHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK----SEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 481 (689)
.+.|...+.||+|.||+|+.|... +|..||+|.+...... ...+...+|+.++++++ ||||++++.++.. ..
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t--~~ 93 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT--PT 93 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec--CC
Confidence 356777899999999999999865 7899999977654211 23445668999999999 9999999999954 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-CCeEEec
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPLIAD 560 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~kl~D 560 (689)
..++||||+.+|+|.+++.... .+.+.+..++..|++.|++|+|+.+ |+||||||+|||+|++ +.+||+|
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g----~l~E~~ar~~F~Qlisav~y~H~~g-----i~HRDLK~ENilld~~~~~~Kl~D 164 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG----RLKEDEARKYFRQLISAVAYCHSRG-----IVHRDLKPENILLDGNEGNLKLSD 164 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC----CCChHHHHHHHHHHHHHHHHHHhCC-----EeeCCCCHHHEEecCCCCCEEEec
Confidence 6999999999999999998833 3788899999999999999999988 9999999999999999 9999999
Q ss_pred cccccccc-CCceeeeecCCCCCCCCCccccccCC-CC-CcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc
Q 005586 561 CGLHKLLA-DDIVFSVLKTSAAMGYLAPEYVTTGR-FT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 561 fGla~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
||++.... .+. ......|++.|+|||++.+.. |+ .++||||+||+||-|++|+.||.+....... ..+...
T Consensus 165 FG~s~~~~~~~~--~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~----~ki~~~ 238 (370)
T KOG0583|consen 165 FGLSAISPGEDG--LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLY----RKIRKG 238 (370)
T ss_pred cccccccCCCCC--cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHH----HHHhcC
Confidence 99999883 322 334456899999999999977 86 7899999999999999999999874322211 111111
Q ss_pred ccCCCCCHHH-HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 638 NLKGKFSESE-AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 638 ~~~~~~~~~~-~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
. -.++... +.++..++.+|+..+|.+|+++.+++.+-|...
T Consensus 239 ~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 239 E--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred C--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1 1233334 788999999999999999999999998877664
No 74
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.3e-38 Score=325.38 Aligned_cols=253 Identities=25% Similarity=0.476 Sum_probs=205.5
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|+..+.||+|+||.||+|..+++..||+|.+..... ...+|.+|+.++++++|+|++++++++. ....++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~---~~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS---EEPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC---CCCcEEEEE
Confidence 35677789999999999999988888999999876542 3457999999999999999999999873 245789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.++++.... ..+++.+++.++.+++.||+|||+.+ |+||||||+||++++++.+||+|||+++.+.
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~-----i~H~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 81 YMSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIERMN-----YIHRDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred ecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCccceEEEeCCceEEeCCceeeeecc
Confidence 9999999999976432 34899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||++.+..++.++||||||+++|||++ |+.||...... ...+.+........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 228 (260)
T cd05070 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVERGYRMPCPQDC 228 (260)
T ss_pred CcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcC
Confidence 433222222334567999999988889999999999999999999 88888543211 111122222222334455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..+.+++.+|+..+|++||++.++++.|+.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 6789999999999999999999999998874
No 75
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-38 Score=330.90 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=206.6
Q ss_pred CCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
|...+.||+|+||.||+|... ....+++|.+..........++.+|+.++++++||||+++++.+.. .+..+
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 79 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ--DGPLL 79 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCCcE
Confidence 566789999999999999853 2357899988766544456789999999999999999999999844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCC
Q 005586 485 LIYDFAPKGKLSKYLDQEEG--------------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLS 544 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk 544 (689)
+|+||+++|+|.+++..... ....++|.+++.++.|++.||+|||+.+ |+|||||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----ivH~dik 154 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-----LVHRDLA 154 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-----eehhhhh
Confidence 99999999999999864321 1135889999999999999999999887 9999999
Q ss_pred CCceeecCCCCeEEecccccccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhH
Q 005586 545 VEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSM 622 (689)
Q Consensus 545 ~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~ 622 (689)
|+|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||+| |+.|+....
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999986533221 11122334567999999988889999999999999999999 998886432
Q ss_pred HHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 623 RLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
... +.+.+........+.....++.+++..|++.+|++||++.|+++.|+....
T Consensus 235 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 235 PER-----LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 211 122222323333344556789999999999999999999999999988643
No 76
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.1e-38 Score=323.30 Aligned_cols=248 Identities=25% Similarity=0.411 Sum_probs=199.8
Q ss_pred ccccCCcceEEEEEec---CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 416 LLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.||+|+||.||+|.++ ++..||+|++.........++|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~---~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE---AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---CCCeEEEEEeCCC
Confidence 3899999999999864 456799999976654444567999999999999999999999873 2468999999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 572 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 572 (689)
|+|.+++.... ..+++.++++++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 79 ~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 79 GPLNKFLSGKK---DEITVSNVVELMHQVSMGMKYLEGKN-----FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhcC-----eeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 99999997543 24899999999999999999999987 99999999999999999999999999986644322
Q ss_pred ee--eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 573 FS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 573 ~~--~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
.. .....++..|+|||.+....++.++|||||||++||+++ |+.|+....... ....+........+..+..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 225 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-----VMSFIEQGKRLDCPAECPP 225 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHCCCCCCCCCCCCH
Confidence 11 111223467999999988889999999999999999996 999986542221 1122222222334445577
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 650 KLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
++.+++..||+.+|++||++.+|.+.|+..
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 899999999999999999999999998763
No 77
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=334.75 Aligned_cols=249 Identities=19% Similarity=0.393 Sum_probs=209.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.|+..+.||+|.||.||||... .++.||+|++..+..+.+..+..+|+.++++++|+||.+++|.+.. +..++++||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~--g~~LwiiMe 91 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK--GTKLWIIME 91 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee--cccHHHHHH
Confidence 4666789999999999999975 6899999999988877777889999999999999999999997754 367899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
||.+|++.+.|.... .+++....-|++++..||.|||+.+ .+|||||+.|||+..+|.+|++|||++..+.
T Consensus 92 y~~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH~~~-----kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLHSEK-----KIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred HhcCcchhhhhccCC----CCccceeeeehHHHHHHhhhhhhcc-----eecccccccceeEeccCcEEEEecceeeeee
Confidence 999999999997653 2467777789999999999999987 8999999999999999999999999999887
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
...... ....||+.|||||++....|+.|+||||+|++.+||.+|.+|+....... ..-.+.+...+......+
T Consensus 163 ~~~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-----vlflIpk~~PP~L~~~~S 236 (467)
T KOG0201|consen 163 NTVKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-----VLFLIPKSAPPRLDGDFS 236 (467)
T ss_pred chhhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-----EEEeccCCCCCccccccC
Confidence 665443 55679999999999998899999999999999999999999986432210 111122222222233456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..+.+++..|+.++|+.||++.+++++
T Consensus 237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 237 PPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 679999999999999999999999987
No 78
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.3e-39 Score=330.63 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=198.2
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||+||++..+ +|+.||+|++...... .....+..|++++++++|+||+++.+++. .....++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--~~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ--TKTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc--CCCeEEEEEeCCCCC
Confidence 799999999999875 7899999998754322 23356788999999999999999998874 357799999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|..++.........+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~- 152 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-----IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS- 152 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-
Confidence 999988654333346899999999999999999999987 99999999999999999999999999976644321
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......++..|+|||++.+..++.++|||||||++|||++|+.||.................... ..++...+..+.+
T Consensus 153 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 230 (280)
T cd05608 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--VTYPDKFSPASKS 230 (280)
T ss_pred cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--CCCcccCCHHHHH
Confidence 12234578889999999999999999999999999999999999964321111111111111111 1233445677899
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHHH
Q 005586 654 MALVCTHEDPENRP-----TMEAVIEEL 676 (689)
Q Consensus 654 l~~~Cl~~dp~~RP-----s~~evl~~L 676 (689)
++..|++.||++|| ++++++++-
T Consensus 231 li~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 231 FCEALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred HHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 99999999999999 788888764
No 79
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=327.38 Aligned_cols=263 Identities=19% Similarity=0.300 Sum_probs=213.0
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-------------hHHHHHHHHHHHHhccCCCcceeEe
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-------------SEEAEFVKGLYLLTSLRHENIIRLR 472 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-------------~~~~~f~~e~~~l~~l~H~niv~l~ 472 (689)
..++|...+.||+|.||.|-+|+.. +++.||||++.+.... ...+...+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4467888899999999999999865 7999999999654211 1124788999999999999999999
Q ss_pred eEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 473 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 473 g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
.+..+...+..|+|+|||..|.+...=.. ...++..+.+++.+++..||+|||.++ ||||||||+|+||++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d----~~els~~~Ar~ylrDvv~GLEYLH~Qg-----iiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD----KPELSEQQARKYLRDVVLGLEYLHYQG-----IIHRDIKPSNLLLSS 245 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC----cccccHHHHHHHHHHHHHHHHHHHhcC-----eeccccchhheEEcC
Confidence 99988778899999999998876533211 122899999999999999999999988 999999999999999
Q ss_pred CCCeEEecccccccccCC----ceeeeecCCCCCCCCCccccccCC----CCCcccchhHHHHHHHHHhCCCCcchhHHH
Q 005586 553 QFNPLIADCGLHKLLADD----IVFSVLKTSAAMGYLAPEYVTTGR----FTERSDIFAFGVIILQILTGSLVLTSSMRL 624 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~----~~~ksDV~sfGvvl~elltG~~p~~~~~~~ 624 (689)
++++||+|||.+...... .........||+.|||||...++. .+.+.||||+||.||.|+.|+.||.+....
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 999999999999866322 111233478999999999987733 257889999999999999999999776543
Q ss_pred HHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 625 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
. .+..++...+.-...+++...+.+|+.+++.+||++|.+..+|..+.+...+.
T Consensus 326 ~----l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g 379 (576)
T KOG0585|consen 326 E----LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG 379 (576)
T ss_pred H----HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence 3 34444554444333345688899999999999999999999999999877663
No 80
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.1e-38 Score=333.60 Aligned_cols=260 Identities=19% Similarity=0.354 Sum_probs=199.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|+.+ +|+.||+|++...........+.+|++++++++||||+++++++.. ....++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 82 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTLVF 82 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeEEEEE
Confidence 57888899999999999999986 6899999999765433444567899999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++....+ .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 83 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 83 EYVH-TDLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQRY-----ILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred ECCC-cCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 9995 688888865432 3788999999999999999999987 999999999999999999999999998754
Q ss_pred cCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh-----------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI----------- 635 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~----------- 635 (689)
..... ......++..|+|||.+.+ ..++.++||||+||++|||+||+.||............+....
T Consensus 154 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 154 SVPSH-TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred cCCCc-cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccch
Confidence 32211 1223456788999998765 4578999999999999999999999964321111000000000
Q ss_pred ------cc-ccCCCCCH---------HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 636 ------DR-NLKGKFSE---------SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 636 ------~~-~~~~~~~~---------~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
++ ......+. .....+.+++..|++.||++|||+.|++++-+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence 00 00000000 01246789999999999999999999998866543
No 81
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2e-38 Score=323.96 Aligned_cols=253 Identities=25% Similarity=0.456 Sum_probs=206.0
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...++||+|+||.||+|..++++.||+|.+.... ....+|.+|+.++++++|+||+++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~~v~e 80 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVVT---QEPIYIITE 80 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEEc---cCCcEEEEE
Confidence 4677789999999999999999899999999987654 23457999999999999999999999863 356899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.+++....+ ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~-----i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 81 YMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERKN-----YIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred cCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCC-----eecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 9999999999876543 35899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||++....++.++||||||+++|||++ |+.|+........ .+.+........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~ 228 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV-----IQNLERGYRMPRPDNC 228 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH-----HHHHHcCCCCCCCCCC
Confidence 332222222334568999999988889999999999999999999 9999864322111 1111222222233344
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.++.+++.+|++.+|++||++++++..|+.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 229 PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 5679999999999999999999999998864
No 82
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.4e-39 Score=331.96 Aligned_cols=256 Identities=19% Similarity=0.266 Sum_probs=207.7
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
..++|.....||+|+||.||+|+-+ +|..+|+|++++..- ..+......|-.+|....+|+||+|+-.| .+.+.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF--QD~~~L 216 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF--QDKEYL 216 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--cCCCee
Confidence 4467888999999999999999976 699999999987642 34456788899999999999999998666 567899
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
||||||+||||+..+|.... .|+......++.+++.|++-+|+.| +|||||||+|+|||..|++||+||||
T Consensus 217 YLiMEylPGGD~mTLL~~~~----~L~e~~arfYiaE~vlAI~~iH~~g-----yIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKD----TLTEDWARFYIAETVLAIESIHQLG-----YIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred EEEEEecCCccHHHHHHhcC----cCchHHHHHHHHHHHHHHHHHHHcC-----cccccCChhheeecCCCCEeeccccc
Confidence 99999999999999998765 4888888999999999999999998 99999999999999999999999999
Q ss_pred cccccCC-----------------------ce-----ee------------------eecCCCCCCCCCccccccCCCCC
Q 005586 564 HKLLADD-----------------------IV-----FS------------------VLKTSAAMGYLAPEYVTTGRFTE 597 (689)
Q Consensus 564 a~~~~~~-----------------------~~-----~~------------------~~~~~~~~~y~aPE~~~~~~~~~ 597 (689)
+.-+... .. .. .....||+.|||||++.+..|+.
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~ 367 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGK 367 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCc
Confidence 8543210 00 00 01246889999999999999999
Q ss_pred cccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCC---CHHHHHH
Q 005586 598 RSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRP---TMEAVIE 674 (689)
Q Consensus 598 ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RP---s~~evl~ 674 (689)
.+|+||+|||+|||+.|-+||.+......+...+.- ...+...-......+..+++.+|+. ||++|- .++||-+
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nw--r~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNW--RETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH--hhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 999999999999999999999887666555433221 1112222223345789999999999 999996 5777776
Q ss_pred HH
Q 005586 675 EL 676 (689)
Q Consensus 675 ~L 676 (689)
|.
T Consensus 445 HP 446 (550)
T KOG0605|consen 445 HP 446 (550)
T ss_pred CC
Confidence 64
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-38 Score=336.18 Aligned_cols=259 Identities=19% Similarity=0.328 Sum_probs=203.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||++..+ +|..+|+|.+...........|.+|++++++++||||++++++|.. .+..++||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--CCEEEEEE
Confidence 57888899999999999999986 6889999998765434445679999999999999999999999965 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++.... .+++.....++.+++.||+|||+.+ .|+||||||+|||+++++.+||+|||+++..
T Consensus 83 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~----~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 83 EHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC----CEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 9999999999997643 3788999999999999999999742 2999999999999999999999999999765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh-------hh----------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES-------AT---------- 630 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~-------~~---------- 630 (689)
.... .....++..|+|||.+.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 155 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (333)
T cd06650 155 IDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRP 231 (333)
T ss_pred hhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCccc
Confidence 4321 122357788999999988889999999999999999999999986422110000 00
Q ss_pred -------------------hhHhhcccc---CCCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 631 -------------------FENFIDRNL---KGKFS-ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 631 -------------------~~~~~~~~~---~~~~~-~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.....+... ....+ .....++.+++.+||+.||++||++.|++++-+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence 000000000 00000 012456889999999999999999999998866543
No 84
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-38 Score=344.52 Aligned_cols=260 Identities=25% Similarity=0.388 Sum_probs=205.9
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 481 (689)
++|...+.||+|+||.||+|+++ .+..||+|+++........+.+.+|++++.++. |||||+++++|.. .+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~--~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK--GG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--CC
Confidence 45666789999999999999864 346899999986543444567999999999997 9999999999854 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCC---------------------------------------------------------
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEG--------------------------------------------------------- 504 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~--------------------------------------------------------- 504 (689)
..++|+||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 78999999999999999975321
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 505 -------------------------------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 505 -------------------------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
....++|...++|+.|++.||+|||+.+ |+||||||+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrdlkp~N 269 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-----CVHRDLAARN 269 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----cCcccCCcce
Confidence 1124788889999999999999999876 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986533221 11112345678999999988889999999999999999998 888885432111
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+....+...+.....++.+++..||+.+|++||+++||++.|+..
T Consensus 350 ----~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 350 ----QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred ----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11222233333333444567899999999999999999999999999865
No 85
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.5e-38 Score=324.74 Aligned_cols=256 Identities=23% Similarity=0.463 Sum_probs=205.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CC---cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DG---TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|+..+.||+|+||.||+|..+ ++ ..+|+|.+.........++|..|++++.+++|||++++.+++.. .+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK--FKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc--CCCcE
Confidence 46777899999999999999975 33 37999998765444456789999999999999999999999844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.++++...+ .++|.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~al~~lH~~~-----i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 83 IITEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGMKYLSDMN-----YVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccchhhEEEcCCCcEEECCCccc
Confidence 99999999999999976432 4899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeee--ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 565 KLLADDIVFSV--LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 565 ~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
+.......... .....+..|+|||++....++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-----~~~~i~~~~~~ 229 (268)
T cd05063 155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-----VMKAINDGFRL 229 (268)
T ss_pred eecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----HHHHHhcCCCC
Confidence 86643321111 11223457999999988889999999999999999998 999985432211 11111112222
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
..+.....++.+++.+|++.+|++||+|.+|++.|+.+
T Consensus 230 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 22334567789999999999999999999999999764
No 86
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.2e-38 Score=324.17 Aligned_cols=254 Identities=25% Similarity=0.455 Sum_probs=205.0
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|...+...||+|++..... ...+|.+|++++++++||||+++++++.+ ...++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv~e 80 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVTE 80 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEEEEE
Confidence 46778899999999999999987777899999975432 34578999999999999999999998732 45789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++...+ ..++|..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||.++.+.
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~-----i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 81 YMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERMN-----YVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred cCCCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 9999999999976432 34789999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||+..+..++.++||||||+++|||+| |+.|+........ ... +........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~ 228 (262)
T cd05071 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----LDQ-VERGYRMPCPPEC 228 (262)
T ss_pred ccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH----HHH-HhcCCCCCCcccc
Confidence 433222223345667999999988899999999999999999999 7888854322111 111 1111112234456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+..+.+++.+|++.+|++||++.++++.|+..
T Consensus 229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 229 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 67899999999999999999999999998763
No 87
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-38 Score=329.02 Aligned_cols=255 Identities=24% Similarity=0.396 Sum_probs=202.5
Q ss_pred CCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
|...+.||+|+||.||+|... ++..||+|++...........|.+|+.++.+++||||+++++++.. .+..+
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~ 84 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--EQPLS 84 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CCceE
Confidence 455678999999999999864 3578999999865433345678999999999999999999999854 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 485 LIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
+++||+++++|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-----i~H~dlkp~Nil~~~ 159 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFD 159 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-----ccccccchhheEecC
Confidence 99999999999999863211 1235889999999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhh
Q 005586 553 QFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESAT 630 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~ 630 (689)
++.+||+|||+++.+....... .....+++.|+|||.+.++.++.++|||||||++|||+| |..|+...... ..
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~ 235 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----DV 235 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 9999999999998764432211 222334678999999988889999999999999999998 77787543221 11
Q ss_pred hhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 631 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
...+.+.. ....+...+..+.+++..||+.+|++||++.||++.|+
T Consensus 236 ~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 236 IEMIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 22222221 22334556777999999999999999999999999986
No 88
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.4e-38 Score=324.62 Aligned_cols=261 Identities=20% Similarity=0.321 Sum_probs=208.0
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+|+.. +++.||||.+.... .......|.+|++++++++||||+++++++.. .+..++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE--DNELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--CCeEEE
Confidence 46778899999999999999875 78999999886532 23344678999999999999999999998854 468899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+||+++|+|.+++.........+++...+.++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-----VMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-----eeCCCCCHHHEEEcCCCCEEECccccce
Confidence 99999999999998654333345888999999999999999999987 9999999999999999999999999988
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc-ccCCCCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-NLKGKFS 644 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 644 (689)
....... ......++..|+|||.+.+..++.++||||||+++|||+||+.|+....... ..+.+.+.. .......
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 230 (267)
T cd08228 155 FFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---FSLCQKIEQCDYPPLPT 230 (267)
T ss_pred eccchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH---HHHHHHHhcCCCCCCCh
Confidence 7654321 1122346778999999988889999999999999999999999985432111 011111111 1111122
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
......+.+++.+||+.+|++||++.||++.++...
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 345678999999999999999999999999998753
No 89
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.8e-39 Score=335.73 Aligned_cols=242 Identities=21% Similarity=0.294 Sum_probs=195.6
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||.||+|... +++.||+|++.... .......+.+|++++.+++||||+++++++.. .+..++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCC
Confidence 799999999999976 58899999987542 13344678899999999999999999998843 57899999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 79 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 148 (312)
T cd05585 79 ELFHHLQREG----RFDLSRARFYTAELLCALENLHKFN-----VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD- 148 (312)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-
Confidence 9999997643 3899999999999999999999987 99999999999999999999999999986433221
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......+|..|+|||.+.+..++.++|||||||++|||+||+.||....... ....+.... ..++.....++.+
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~ 222 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE----MYRKILQEP--LRFPDGFDRDAKD 222 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH----HHHHHHcCC--CCCCCcCCHHHHH
Confidence 1223457889999999999999999999999999999999999996532211 111222111 1234445667899
Q ss_pred HHHHhccCCCCCCC---CHHHHHHHH
Q 005586 654 MALVCTHEDPENRP---TMEAVIEEL 676 (689)
Q Consensus 654 l~~~Cl~~dp~~RP---s~~evl~~L 676 (689)
++..||+.||++|| ++.|++.+.
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l~hp 248 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIKNHP 248 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence 99999999999997 467777664
No 90
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-38 Score=332.48 Aligned_cols=264 Identities=23% Similarity=0.418 Sum_probs=204.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc--EEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|+..+.||+|+||.||+|..+ +|. .+|+|+++.........+|.+|++++.++ +||||+++++++. ..+..+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~--~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE--HRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC--CCCCce
Confidence 45777889999999999999975 454 46888776544344557899999999999 8999999999984 356799
Q ss_pred EEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 485 LIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
+|+||+++|+|.++++.... ....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-----i~H~dlkp~Nili~~ 159 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRDLAARNILVGE 159 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccchheEEecC
Confidence 99999999999999976431 1135889999999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhh
Q 005586 553 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATF 631 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~ 631 (689)
++.+||+|||+++...... .......+..|+|||++.+..++.++|||||||++|||+| |..||....... .
T Consensus 160 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~ 232 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----L 232 (303)
T ss_pred CCcEEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----H
Confidence 9999999999986432111 1111223567999999988889999999999999999998 999985432111 1
Q ss_pred hHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccccc
Q 005586 632 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATF 686 (689)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~ 686 (689)
.+.+........+...+..+.+++.+|++.+|++||++.+++++|..+-.....|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 233 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 1111111122223334567899999999999999999999999998765554433
No 91
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2e-38 Score=330.62 Aligned_cols=259 Identities=22% Similarity=0.408 Sum_probs=203.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc--EEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|+..+.||+|+||.||+|..+ ++. .+++|.++........+.|.+|++++.++ +||||+++++++.. .+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN--RGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc--CCcce
Confidence 46778899999999999999875 343 47888887544344556899999999999 79999999999844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 485 LIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
+|+||+++|+|.++++.... ....+++..++.|+.|++.||+|||+.+ |+||||||+|||+++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-----ivH~dlkp~Nill~~ 154 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-----FIHRDLAARNVLVGE 154 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCcCCcceEEECC
Confidence 99999999999999975421 1134889999999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhh
Q 005586 553 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATF 631 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~ 631 (689)
++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 155 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~----- 227 (297)
T cd05089 155 NLASKIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL----- 227 (297)
T ss_pred CCeEEECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 9999999999986432211 1111223457999999988889999999999999999998 9999864322111
Q ss_pred hHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 632 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
.+.+........+...+..+.+++.+||+.+|.+||++.+++++|..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 228 YEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11122222222334456778999999999999999999999999877644
No 92
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.9e-38 Score=322.79 Aligned_cols=253 Identities=25% Similarity=0.469 Sum_probs=204.5
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|...++..||+|++.... ...+.|.+|++++++++|+|++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS---EEPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc---CCCcEEEEE
Confidence 3566778999999999999998877789999887543 23457899999999999999999999873 245789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++.... ..++|..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~-----i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 81 FMGKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERMN-----YIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred cCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----EeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 9999999999976432 34899999999999999999999887 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||+..+..++.++|||||||++|||+| |+.|+......... .. +........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~----~~-~~~~~~~~~~~~~ 228 (260)
T cd05069 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL----EQ-VERGYRMPCPQGC 228 (260)
T ss_pred CCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HH-HHcCCCCCCCccc
Confidence 432222222345667999999988899999999999999999999 89898654322111 11 1112222334455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..+.+++.+||+.+|++||++++|++.|+.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 229 PESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 6789999999999999999999999999875
No 93
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=347.21 Aligned_cols=259 Identities=26% Similarity=0.438 Sum_probs=220.5
Q ss_pred cccccccCCcceEEEEEe-cCC----cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 413 EVNLLGKGNFSSVYKGTL-RDG----TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~-~~g----~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
..++||+|+||+||||.+ ++| .+||+|++......+...+|.+|+-.|++++|||+++|+|+|... ...||+
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---~~qlvt 776 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS---TLQLVT 776 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc---hHHHHH
Confidence 357999999999999986 333 579999998877677778999999999999999999999999653 478999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
+|||.|+|.+|++.++. .+.-+..+.|..|||+||.|||..+ +|||||.++|||+.+-..+||.|||+++.+
T Consensus 777 q~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkgM~YLe~qr-----lVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKGMKYLEEQR-----LVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HhcccchHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHHhcc-----hhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 99999999999998764 3777889999999999999999876 999999999999999999999999999988
Q ss_pred cCCc-eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 568 ADDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 568 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
..+. .+......-.+.|||-|.+....|+.++|||||||.+||++| |..|+... ....+.+++....+...|+
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi-----~~~eI~dlle~geRLsqPp 923 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI-----PAEEIPDLLEKGERLSQPP 923 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC-----CHHHhhHHHhccccCCCCC
Confidence 6543 333333444567999999999999999999999999999998 78887543 2234555666666667788
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcccccc
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 687 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~ 687 (689)
.+..++..++.+||..|+..||+++++...+.+.+.+..-|+
T Consensus 924 iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl 965 (1177)
T KOG1025|consen 924 ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYL 965 (1177)
T ss_pred CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEe
Confidence 899999999999999999999999999999998887765543
No 94
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.9e-38 Score=327.27 Aligned_cols=262 Identities=26% Similarity=0.444 Sum_probs=205.9
Q ss_pred cCCcccccccCCcceEEEEEe-----cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
.|+..+.||+|+||.||++.+ .++..||+|.+...........|.+|++++++++|||++++++++...+....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 466788999999999999974 257899999987665444556899999999999999999999998665456789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++.... ..++|.+++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 85 lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~g-----i~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSRQ-----YVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeecccchheEEEcCCCCEEECCCccc
Confidence 9999999999999996543 24899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCcee--eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh----------hhhhh
Q 005586 565 KLLADDIVF--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE----------SATFE 632 (689)
Q Consensus 565 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~----------~~~~~ 632 (689)
+........ ......++..|+|||++.+..++.++|||||||++|||+|++.|.......... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876443211 111233556799999998888999999999999999999987765322110000 00011
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 633 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.+........+...+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111112222344567899999999999999999999999999865
No 95
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.1e-39 Score=337.56 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=197.2
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
+.||+|+||.||+++.+ +|..||+|++..... ......+.+|++++.+++||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCCC
Confidence 36999999999999875 689999999975431 2344578889999999999999999998844 478999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
+|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 79 GGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSRD-----VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHEEEcCCCCEEecccHHhccccCCC
Confidence 999999887543 4899999999999999999999987 9999999999999999999999999987542221
Q ss_pred eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKL 651 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 651 (689)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... .++.....++
T Consensus 150 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~~~~~~~~--~~p~~~~~~~ 222 (323)
T cd05595 150 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILMEEI--RFPRTLSPEA 222 (323)
T ss_pred C-ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCC--CCCCCCCHHH
Confidence 1 12234578899999999988999999999999999999999999965322111 111111111 2334446678
Q ss_pred HHHHHHhccCCCCCCC-----CHHHHHHHH
Q 005586 652 GKMALVCTHEDPENRP-----TMEAVIEEL 676 (689)
Q Consensus 652 ~~l~~~Cl~~dp~~RP-----s~~evl~~L 676 (689)
.+++..|++.||++|| ++.+++++-
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 9999999999999998 899998764
No 96
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.2e-38 Score=323.35 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=192.3
Q ss_pred ccccCCcceEEEEEecC---CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 416 LLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.||+|+||.||+|.+.+ +..+|+|.++..........|.+|+.++++++||||+++++++.+ ....++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE--VTPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CCCcEEEEECCCC
Confidence 59999999999998653 467999998766544455689999999999999999999999843 4678999999999
Q ss_pred CCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 493 GKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 493 gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
|+|.++++..... ....++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-----i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-----FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-----EeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 9999999764321 234678888899999999999999987 9999999999999999999999999997654332
Q ss_pred eee-eecCCCCCCCCCccccccC-------CCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 572 VFS-VLKTSAAMGYLAPEYVTTG-------RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 572 ~~~-~~~~~~~~~y~aPE~~~~~-------~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
... .....++..|+|||++... .++.++||||||+++|||++ |+.||..............+...+.....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 211 1123456779999988542 35789999999999999996 99998643222111111111000001111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
........+.+++..|+ .+|++||+++||++.|+
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11223456888999999 58999999999998875
No 97
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.1e-38 Score=329.28 Aligned_cols=257 Identities=19% Similarity=0.363 Sum_probs=195.0
Q ss_pred cCCcccccccCCcceEEEEEec--CCcEEEEEEecccCCc-hHHHHHHHHHHHHhcc---CCCcceeEeeEEEc---CCC
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR--DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSL---RHENIIRLRGFCCS---RGR 480 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~---~~~ 480 (689)
+|...+.||+|+||.||+|+.. +|+.||+|+++..... .....+.+|+.++.++ +||||++++++|.. ...
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6778899999999999999863 4788999998754322 2234566777766655 69999999998852 223
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++||||++ ++|.+++..... ..+++.+++.|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~-----iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSHR-----VVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCHHHEEEcCCCCEEEcc
Confidence 56899999996 699999975432 34899999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh------
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF------ 634 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~------ 634 (689)
||+++...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||................
T Consensus 154 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 154 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred ccceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 99998664431 2223457888999999988899999999999999999999999996543221111110000
Q ss_pred --------hccccC--CC-----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 635 --------IDRNLK--GK-----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 635 --------~~~~~~--~~-----~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
....+. .. ........+.+++.+|++.||++||++.|++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp 288 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 288 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence 000000 00 0112345678999999999999999999999753
No 98
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.2e-38 Score=321.04 Aligned_cols=246 Identities=22% Similarity=0.403 Sum_probs=199.6
Q ss_pred ccccCCcceEEEEEec---CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 416 LLGKGNFSSVYKGTLR---DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
.||+|+||.||+|.++ ++..+|+|+++.... ....++|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE---AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---CCCcEEEEecCC
Confidence 5899999999999753 578999999875542 234568999999999999999999999883 246789999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.+....
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~~-----i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 79 LGPLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEETN-----FVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149 (257)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccchhhEEEcCCCeEEECCCccccccCCCC
Confidence 999999997543 4889999999999999999999987 9999999999999999999999999998765432
Q ss_pred eee--eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 572 VFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 572 ~~~--~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
... .....++..|+|||.+....++.++|||||||++|||+| |+.||....... ..+.+........+...+
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~ 224 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-----VTQMIESGERMECPQRCP 224 (257)
T ss_pred CeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCC
Confidence 211 112233467999999988889999999999999999998 999986542221 122233333333445566
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.++.+++.+||+.||++||+|.+|+++|+.
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 789999999999999999999999999875
No 99
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-38 Score=332.40 Aligned_cols=262 Identities=24% Similarity=0.412 Sum_probs=208.1
Q ss_pred ccCCcccccccCCcceEEEEEec--------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
++|...+.||+|+||.||+|+.. ++..+|+|.+..........++..|++++.++ +||||++++++|..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec--
Confidence 46788899999999999999753 23579999998654344556789999999999 79999999999854
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
.+..++||||+++|+|.+++..... ....++|.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-----i~H~dlkp~N 170 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-----CIHRDLAARN 170 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-----cccccccHHh
Confidence 4678999999999999999976432 1235899999999999999999999987 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
|++++++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.|+......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~- 249 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 249 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence 999999999999999998664322111 112223467999999988889999999999999999998 88887543211
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
.+.+.+........+.....++.+++..|++.+|++||+|.||+++|+.+.+.
T Consensus 250 ----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 250 ----ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ----HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 11112222222233445567899999999999999999999999999887554
No 100
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.9e-39 Score=340.44 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=202.8
Q ss_pred ccCCcccccccCCcceEEEEEecC--CcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD--GTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|...+.||+|+||.||+|..+. +..||+|++..... ......+.+|++++..++||||+++++++.. .+..+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~ 107 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--ESYLY 107 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe--CCEEE
Confidence 357778999999999999998653 46899999865421 2334678899999999999999999999854 47899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 108 lv~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSLN-----IVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEccCCCHHHEEECCCCCEEEecCCCC
Confidence 9999999999999997643 3889999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
+...... ....+|..|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... ..++
T Consensus 179 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~~--~~~p 248 (340)
T PTZ00426 179 KVVDTRT----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEGI--IYFP 248 (340)
T ss_pred eecCCCc----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcCC--CCCC
Confidence 8764322 234578899999999988899999999999999999999999975432211 11122111 1233
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHh
Q 005586 645 ESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTV 678 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~~ 678 (689)
......+.+++.+|++.||++|+ +++|++++.+.
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 34456788999999999999995 89999887543
No 101
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=353.41 Aligned_cols=263 Identities=15% Similarity=0.247 Sum_probs=209.4
Q ss_pred HHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC
Q 005586 403 EVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 480 (689)
Q Consensus 403 ~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 480 (689)
+.....++|...+.||+|+||.||+|+.. +|+.||||++..... ......+.+|+..+..++|+||+++...+.....
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 33445578999999999999999999864 799999999976543 3345678899999999999999999876643321
Q ss_pred ------CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC
Q 005586 481 ------GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 554 (689)
Q Consensus 481 ------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~ 554 (689)
...++||||+++|+|.++++........+++.....|+.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-----IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-----MIHRDIKSANILLCSNG 180 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEEeCCC
Confidence 1368999999999999999865444456899999999999999999999987 99999999999999999
Q ss_pred CeEEecccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH
Q 005586 555 NPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 555 ~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~ 633 (689)
.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... .+..
T Consensus 181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~----~~~~ 256 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE----VMHK 256 (496)
T ss_pred CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHH
Confidence 9999999999876432211 1223457889999999999999999999999999999999999996532211 1111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..... ....+...+.++.+++..||+.||++||++.+++++
T Consensus 257 ~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGR-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111 112344456789999999999999999999999876
No 102
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-38 Score=352.52 Aligned_cols=252 Identities=17% Similarity=0.260 Sum_probs=202.1
Q ss_pred CCcccccccCCcceEEEEEec-C-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-D-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|+||.||+|... + +..||+|.+.... ......+.+|+.+++.++|||||++++++.. .+..++|||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~E 145 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKS--DDKLLLIME 145 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--CCEEEEEEE
Confidence 667789999999999999864 4 6788888775443 3344578889999999999999999999854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++.......++++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-----MMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-----EEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999999998764333346889999999999999999999987 9999999999999999999999999998765
Q ss_pred CCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......||++|+|||++.+..++.++|||||||++|||+||+.||....... .+..+..... ...+...
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~----~~~~~~~~~~-~~~~~~~ 295 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE----IMQQVLYGKY-DPFPCPV 295 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCCC-CCCCccC
Confidence 43211 1223457889999999999899999999999999999999999996432211 1111111111 1223345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+.++.+++..||+.||++||++.+++.+
T Consensus 296 s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 296 SSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 5679999999999999999999999754
No 103
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-38 Score=329.19 Aligned_cols=256 Identities=18% Similarity=0.355 Sum_probs=197.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|..+ ++..||+|+++..........+.+|++++++++||||+++++++.. .+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeEEEEE
Confidence 45778899999999999999876 6899999999765433344578899999999999999999998843 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 83 e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 83 EYLD-SDLKQYLDNCG---NLMSMHNVKIFMFQLLRGLSYCHKRK-----ILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred eCCC-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 9997 59999987543 24788999999999999999999987 999999999999999999999999999765
Q ss_pred cCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh-----------hh---
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT-----------FE--- 632 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~-----------~~--- 632 (689)
..... ......++..|+|||.+.+ ..++.++||||+||++|||+||+.||............ +.
T Consensus 154 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 154 SVPTK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred cCCCc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 33211 1123356788999998865 56899999999999999999999998643211110000 00
Q ss_pred ------HhhccccCCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 633 ------NFIDRNLKGKF----SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 633 ------~~~~~~~~~~~----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+...+...... ......++.+++.+|++.||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp 286 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence 00000000000 011245688999999999999999999998763
No 104
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.2e-38 Score=336.93 Aligned_cols=245 Identities=23% Similarity=0.318 Sum_probs=197.8
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
+.||+|+||.||+++.+ +|+.||+|++..... ......+.+|++++++++||||+++++++. ..+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--TKDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--cCCEEEEEEeCCC
Confidence 36999999999999875 689999999975432 234467889999999999999999999884 3578999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
+|+|..++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 79 ~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 79 GGELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHSGK-----IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA 149 (328)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEecccCHHHeEECCCCcEEEecCcCCccCCCcc
Confidence 999999987543 4899999999999999999999987 9999999999999999999999999987543221
Q ss_pred eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKL 651 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 651 (689)
. ......++..|+|||++.+..++.++|||||||++|||+||+.||........ ...+... ...++.....++
T Consensus 150 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~----~~~~~~~--~~~~p~~~~~~~ 222 (328)
T cd05593 150 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILME--DIKFPRTLSADA 222 (328)
T ss_pred c-ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH----HHHhccC--CccCCCCCCHHH
Confidence 1 12234578899999999988999999999999999999999999964322111 1111111 112333445678
Q ss_pred HHHHHHhccCCCCCCC-----CHHHHHHHHH
Q 005586 652 GKMALVCTHEDPENRP-----TMEAVIEELT 677 (689)
Q Consensus 652 ~~l~~~Cl~~dp~~RP-----s~~evl~~L~ 677 (689)
.+++.+|++.||++|| ++.|++++.+
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 9999999999999997 8999998754
No 105
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6e-38 Score=322.53 Aligned_cols=259 Identities=24% Similarity=0.405 Sum_probs=204.5
Q ss_pred CCcccccccCCcceEEEEEecC----CcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC----C
Q 005586 411 FSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----G 481 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----~ 481 (689)
|...+.||+|+||.||+|.+.. +..||+|+++.... .....+|.+|++.+++++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4557899999999999998752 36799999986543 2345689999999999999999999998854322 2
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
..++|+||+++|+|..++..... ....+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-----FIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccchheEEECCCCeEEEC
Confidence 37899999999999999865432 2245899999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcc
Q 005586 560 DCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 560 DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|||+++.+....... ......+..|+|||++.+..++.++|||||||++|||++ |..|+....... ..+.+..
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-----~~~~~~~ 230 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-----IYDYLRH 230 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHc
Confidence 999998765432211 112234567999999988889999999999999999999 888885432211 1111122
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
......+...+.++.+++.+||+.||++||++.|+++.|+..
T Consensus 231 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 222234455677899999999999999999999999999864
No 106
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.3e-38 Score=322.94 Aligned_cols=258 Identities=24% Similarity=0.418 Sum_probs=200.5
Q ss_pred CcccccccCCcceEEEEEecC-Cc--EEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----CCeE
Q 005586 412 SEVNLLGKGNFSSVYKGTLRD-GT--LVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RGEC 483 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~~ 483 (689)
...+.||+|+||.||+|...+ +. .||+|.++.... ......|.+|++++.+++|+||++++++|.... ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 346789999999999999764 33 589998876532 344578999999999999999999999875322 2346
Q ss_pred EEEEEcCCCCCHHHHhhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
++|+||+++|+|.+++..... ....++|.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-----FIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccchhheEEcCCCCEEECCC
Confidence 899999999999998854321 2245899999999999999999999877 999999999999999999999999
Q ss_pred cccccccCCceeee-ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 562 GLHKLLADDIVFSV-LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 562 Gla~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|+++.+........ .....+..|+|||+..+..++.++|||||||++|||++ |+.|+....... ..+.+...-
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~ 231 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-----IYDYLRQGN 231 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHcCC
Confidence 99987654332111 11234567999999998899999999999999999999 788885432211 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
....+...+..+.+++.+||+.+|++||++.|++++|+.+
T Consensus 232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1122334556789999999999999999999999999864
No 107
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.7e-38 Score=328.15 Aligned_cols=261 Identities=21% Similarity=0.393 Sum_probs=205.2
Q ss_pred HhccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 480 (689)
.+++|+..+.||+|+||.||+|..+ .+..||+|.+...........|.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--G 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 4567888999999999999999754 2558999998765434445678899999999999999999999844 4
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCC------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEG------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 554 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~ 554 (689)
...++||||+++|+|.++++.... .....++....+++.|++.||+|||+.+ |+||||||+||++++++
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-----i~H~dikp~nili~~~~ 156 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-----FVHRDLAARNCMVAHDF 156 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CcCCCCChheEEEcCCC
Confidence 678999999999999999975321 1234678888999999999999999887 99999999999999999
Q ss_pred CeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhh
Q 005586 555 NPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFE 632 (689)
Q Consensus 555 ~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~ 632 (689)
.+||+|||+++......... .....++..|+|||.+.++.++.++|||||||++|||++ |..|+...... ...
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~ 231 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVL 231 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 99999999998654322211 112234567999999988899999999999999999999 77787542211 111
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 633 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.+........+...+..+.+++.+|++.||++||++.|+++.|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11111111123344467899999999999999999999999999863
No 108
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.4e-38 Score=336.80 Aligned_cols=262 Identities=24% Similarity=0.412 Sum_probs=204.3
Q ss_pred ccCCcccccccCCcceEEEEEe------cCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 481 (689)
++|...+.||+|+||.||+|.. .+++.||||+++..........+.+|+.++.++ +||||++++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-CC
Confidence 4677889999999999999974 357899999998655444556789999999999 689999999988644 35
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCC--------------------------------------------------------
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGS-------------------------------------------------------- 505 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~-------------------------------------------------------- 505 (689)
..++||||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999999753210
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce-eeeec
Q 005586 506 -------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLK 577 (689)
Q Consensus 506 -------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~ 577 (689)
...++|..+..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++....... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-----i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-----CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 124788999999999999999999987 99999999999999999999999999986543221 11112
Q ss_pred CCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHH
Q 005586 578 TSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 656 (689)
Q Consensus 578 ~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 656 (689)
..++..|+|||.+.+..++.++||||||+++|||++ |..|+....... .+...+........+.....++.+++.
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRAPDYTTPEMYQTML 316 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence 234567999999988899999999999999999997 888885421110 111111111122222223457899999
Q ss_pred HhccCCCCCCCCHHHHHHHHHhhC
Q 005586 657 VCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 657 ~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.||+.+|++||++.||+++|+..-
T Consensus 317 ~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 317 DCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHccCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999998753
No 109
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.7e-38 Score=326.06 Aligned_cols=257 Identities=23% Similarity=0.417 Sum_probs=206.1
Q ss_pred ccCCcccccccCCcceEEEEEecC------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++|...+.||+|+||.||+|..++ +..||+|.+..........+|.+|+.++.+++||||+++++++.. ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~ 83 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST--GQP 83 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC--CCC
Confidence 467778999999999999998752 468999998766544555689999999999999999999999854 477
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCe
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 556 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~ 556 (689)
.++||||+++|+|.+++...... ...++|..++.++.|++.||.|||+.+ |+||||||+||++++++.+
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-----FVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccChheEEEcCCCCE
Confidence 89999999999999999754321 224789999999999999999999887 9999999999999999999
Q ss_pred EEecccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHh
Q 005586 557 LIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENF 634 (689)
Q Consensus 557 kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 634 (689)
||+|||+++........ ......++..|+|||.+.+..++.++|||||||++||++| |+.|+....... ..+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~ 233 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----VLKF 233 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----HHHH
Confidence 99999999866443221 1122335678999999988889999999999999999998 888885432211 1111
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 635 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 635 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+........+...+.++.+++..||+.+|++|||+.|+++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 234 VIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111122334445778999999999999999999999999886
No 110
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=321.88 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=194.4
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC---eEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG---ECFLI 486 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~---~~~lV 486 (689)
|...+++|+|+||.||+|.+. ++..||||+...+..- --+|+++|++++|||||+|.-++...... ...+|
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 455789999999999999976 5789999998765421 12688999999999999999888765544 34589
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-CCeEEecccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPLIADCGLHK 565 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~kl~DfGla~ 565 (689)
|||||. +|.++++.....+..++.....-+..|+.+||+|||+.+ |+||||||.|+|+|.+ +.+||+|||-|+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-----IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-----ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-----cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999987 999999864333455777888889999999999999987 9999999999999976 899999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh-------------
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF------------- 631 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~------------- 631 (689)
.+..+.... .-..|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.....+....+
T Consensus 175 ~L~~~epni--SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 175 VLVKGEPNI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeccCCCce--eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 886543221 12234569999998764 69999999999999999999998886532211111100
Q ss_pred -----hHhhccccCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 632 -----ENFIDRNLKG-----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 632 -----~~~~~~~~~~-----~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+.-.+.++. .+......+..+++.++++.+|.+|.++.|++.+-
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 0111111111 12334567899999999999999999999998763
No 111
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-39 Score=299.86 Aligned_cols=254 Identities=23% Similarity=0.366 Sum_probs=211.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|.||.||.|+.+ ++-.||+|++.+... ..-+.++.+|+++-+.++||||+++++|+.+ ....|+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd--~~riyL 99 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD--SKRIYL 99 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec--cceeEE
Confidence 46788899999999999999976 688999999976643 2334689999999999999999999999965 477999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
++||.++|.|...|+.... ..++......++.|+|.||.|+|..+ ||||||||+|+|++.++..||+|||.+.
T Consensus 100 ilEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k~-----VIhRdiKpenlLlg~~~~lkiAdfGwsV 172 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLKR-----VIHRDIKPENLLLGSAGELKIADFGWSV 172 (281)
T ss_pred EEEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccCC-----cccCCCCHHHhccCCCCCeeccCCCcee
Confidence 9999999999999985433 24777778889999999999999877 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
.-+.+ ......||+.|.+||.+.+...+.++|+|++||+.||++.|.+||.+..... .+.++.. .+-.++.
T Consensus 173 ~~p~~---kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e----tYkrI~k--~~~~~p~ 243 (281)
T KOG0580|consen 173 HAPSN---KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE----TYKRIRK--VDLKFPS 243 (281)
T ss_pred ecCCC---CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH----HHHHHHH--ccccCCc
Confidence 55432 2233458899999999999999999999999999999999999997654222 2222221 1223456
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
..+..+.+++.+|+..+|.+|.+..||+.+.+..+
T Consensus 244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 244 TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 66778999999999999999999999999877543
No 112
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.6e-38 Score=322.06 Aligned_cols=256 Identities=22% Similarity=0.446 Sum_probs=204.5
Q ss_pred ccCCcccccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|...+.||+|+||.||+|... .+..+|+|.++..........|.+|+.++.+++||||+++++++.. .+..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCccE
Confidence 45777899999999999999864 2347999998765444456789999999999999999999999854 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|.+++....+ .+++.+++.|+.|++.||+|||+.+ ++||||||+|||+++++.+|++|||++
T Consensus 82 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~-----i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSDMG-----YVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----EeehhhchhcEEECCCCeEEeCCCCcc
Confidence 99999999999999976532 4899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeee--ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 565 KLLADDIVFSV--LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 565 ~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
+.+........ .....+..|+|||++.+..++.++||||||+++||+++ |+.|+....... ....+. .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----~~~~~~-~~~~~ 228 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----VIKAIE-EGYRL 228 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----HHHHHh-CCCcC
Confidence 87654322111 11223457999999998899999999999999999887 999985432111 111111 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
..+...+..+.+++.+|++.+|++||+|.++++.|+.+
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 22334456789999999999999999999999999864
No 113
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-38 Score=329.64 Aligned_cols=262 Identities=24% Similarity=0.417 Sum_probs=207.2
Q ss_pred ccCCcccccccCCcceEEEEEec--------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
++|...+.||+|+||.||+|+.. ++..||+|.+..........++.+|+.++..+ +||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec--
Confidence 45677789999999999999742 34579999987654344557899999999999 89999999999854
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
....++||||+++|+|.+++..... ....++|.+++.++.|+++||+|||+.+ |+||||||+|
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-----ivH~dlkp~N 167 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-----CIHRDLAARN 167 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-----eeecccccce
Confidence 4678999999999999999976432 1235889999999999999999999987 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
|++++++.+||+|||+++.+....... .....++..|+|||.+.+..++.++||||||+++|||+| |..|+.......
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 999999999999999998765432211 122334567999999988889999999999999999998 777775332111
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
+.+.+........+...+..+.+++.+||+.+|++||+|.||++.|+.+...
T Consensus 248 -----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 248 -----LFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -----HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111222222223345567899999999999999999999999999876543
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.6e-38 Score=319.94 Aligned_cols=261 Identities=20% Similarity=0.329 Sum_probs=209.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||+|+||.||+|... +|+.||+|.++... .......+.+|++++++++|+|++++++++.. .+..++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE--NNELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEEE
Confidence 56888899999999999999987 79999999987432 22335689999999999999999999999854 467899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.........+++.+++.++.+++.||+|||+.+ |+||||||+||++++++.++|+|||+++
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-----IMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-----EecCCcChhhEEECCCCcEEEeccceee
Confidence 99999999999999764333456899999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
........ .....++..|+|||++.+..++.++|||||||++|||++|+.|+........ ...+.+........+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 230 (267)
T cd08224 155 FFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---SLCKKIEKCDYPPLPA 230 (267)
T ss_pred eccCCCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH---HHHhhhhcCCCCCCCh
Confidence 65433211 1223467789999999888899999999999999999999999854321100 0111111111122222
Q ss_pred -HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 646 -SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 646 -~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.....+.+++..||..+|++||++.+|+++|+...
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 45668999999999999999999999999998764
No 115
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.4e-38 Score=325.53 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=209.7
Q ss_pred cCCcccccccCCcceEEEEEec-----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|.+. ++..||||.+..........+|.+|++.+++++|+||+++++++........+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4566789999999999999864 37899999998665333467899999999999999999999998665566789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++..... .++|..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 85 lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQR-----YIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999976542 4899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceee--eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH----------hhhhhh
Q 005586 565 KLLADDIVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA----------ESATFE 632 (689)
Q Consensus 565 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~----------~~~~~~ 632 (689)
.......... ......+..|+|||...+..++.++||||||+++|||+||+.|+........ ....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8776332111 1122344569999999888999999999999999999999998754321110 011222
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 633 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.+........+..++.++.+++.+||+.+|++||+|.||+++|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22333222233344567899999999999999999999999999875
No 116
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.5e-38 Score=328.08 Aligned_cols=258 Identities=24% Similarity=0.408 Sum_probs=206.1
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 481 (689)
++|...+.||+|+||.||+|... ++..||+|+++..........|.+|+++++++ +||||+++++++.. .+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI--GG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--CC
Confidence 56888899999999999999741 35689999987654444556899999999999 79999999999854 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++|+|.++++.... ..+++.++..++.|++.||+|||+.+ |+|+||||+|||+++++.+|++||
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASKN-----CIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eehhhhccceEEEcCCCeEEECCC
Confidence 78999999999999999976432 23899999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 562 GLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 562 Gla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|+++........ ......++..|+|||.+.+..++.++|||||||++|||+| |+.|+....... .+.+.++...
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~~~~~~ 261 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKLIKEGY 261 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHHHHcCC
Confidence 999866443221 1112234567999999988899999999999999999998 999985432111 1122222222
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
....+...+.++.+++.+|++.+|++||++.|+++.|+..
T Consensus 262 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 2222233456799999999999999999999999999864
No 117
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6e-38 Score=326.78 Aligned_cols=262 Identities=24% Similarity=0.388 Sum_probs=201.7
Q ss_pred ccCCcccccccCCcceEEEEEecC---------------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEee
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD---------------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 473 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g 473 (689)
++|...+.||+|+||.||++...+ ...||+|.+...........|.+|++++.+++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467788999999999999987642 23589999876544445568999999999999999999999
Q ss_pred EEEcCCCCeEEEEEEcCCCCCHHHHhhhcCC--------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCC
Q 005586 474 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEG--------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSV 545 (689)
Q Consensus 474 ~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~--------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~ 545 (689)
++.. ....++||||+++++|.+++..... ....++|..++.++.|++.||+|||+.+ ++||||||
T Consensus 85 ~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-----i~H~dlkp 157 (295)
T cd05097 85 VCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-----FVHRDLAT 157 (295)
T ss_pred EEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-----eeccccCh
Confidence 9854 5778999999999999999965321 1124789999999999999999999987 99999999
Q ss_pred CceeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh--CCCCcchhH
Q 005586 546 EKVLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT--GSLVLTSSM 622 (689)
Q Consensus 546 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt--G~~p~~~~~ 622 (689)
+||++++++.+||+|||+++......... .....++..|+|||+..++.++.++|||||||++|||++ |..|+....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999999998664432211 112234567999999988899999999999999999998 556665322
Q ss_pred HHHHhhhhhhHhhcc---ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 623 RLAAESATFENFIDR---NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 623 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..... ....+..+. ......+...+..+.+++.+||+.||++||+|.+|++.|+.
T Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQVI-ENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHHHH-HHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11110 011111111 11111223345689999999999999999999999999863
No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-38 Score=336.58 Aligned_cols=255 Identities=18% Similarity=0.250 Sum_probs=199.0
Q ss_pred cCCcccccccCCcceEEEEEec----CCcEEEEEEecccCC---chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCC
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 481 (689)
+|...+.||+|+||.||+++.. +|+.||+|++..... ......+..|++++.++ +|+||+++++++. ..+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~--~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ--TEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe--cCC
Confidence 4677899999999999999753 588999999875321 22345688899999999 5999999998874 357
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+||
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLHKLG-----IVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cEecCCCHHHeEECCCCCEEEeeC
Confidence 8899999999999999997643 3889999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
|+++..............||..|+|||++.+. .++.++|||||||++|||+||+.||...............+.. ..
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~ 227 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CD 227 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CC
Confidence 99986543322222334578899999998765 4789999999999999999999999532111000001111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHH
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELT 677 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~ 677 (689)
..++......+.+++.+|++.||++|| ++++++++.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 228 PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 223334566788999999999999999 7889987754
No 119
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.3e-38 Score=326.65 Aligned_cols=262 Identities=26% Similarity=0.418 Sum_probs=204.4
Q ss_pred hccCCcccccccCCcceEEEEEecC-----------------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCccee
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRD-----------------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 470 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~ 470 (689)
.++|...+.||+|+||.||+|...+ +..||+|.+..........+|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3567788999999999999998642 35689999987654555678999999999999999999
Q ss_pred EeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCC-------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCC
Q 005586 471 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS-------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 543 (689)
Q Consensus 471 l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dl 543 (689)
+++++.. .+..++|+||+++++|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||
T Consensus 84 ~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-----i~H~dl 156 (296)
T cd05051 84 LLGVCTV--DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-----FVHRDL 156 (296)
T ss_pred EEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-----cccccc
Confidence 9999854 46789999999999999999765421 125899999999999999999999987 999999
Q ss_pred CCCceeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh--CCCCcch
Q 005586 544 SVEKVLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT--GSLVLTS 620 (689)
Q Consensus 544 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt--G~~p~~~ 620 (689)
||+||++++++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..|+..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999998664432221 122334668999999988889999999999999999998 6677754
Q ss_pred hHHHHHhhhhhhHhh---ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 621 SMRLAAESATFENFI---DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
......... ..... ........+...+.++.+++.+|++.||++||++.||++.|+
T Consensus 237 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 237 LTDQQVIEN-AGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cChHHHHHH-HHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 321111110 01110 001111122334568999999999999999999999999886
No 120
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.4e-38 Score=326.88 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=204.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.|+..+.||+|+||.||++... +++.||+|++...... .....+.+|++++++++||||+++++.+. ..+..++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE--TKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec--CCCeEEEE
Confidence 3667889999999999999875 6899999999754322 22356788999999999999999999884 34689999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++.
T Consensus 79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 79 LTLMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRER-----IVYRDLKPENILLDDYGHIRISDLGLAVE 151 (285)
T ss_pred EeccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHCC-----cEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999999999886542 234899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
...... .....++..|+|||++.+..++.++|||||||++|||++|+.||......... ..+...+.. ....++..
T Consensus 152 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 227 (285)
T cd05605 152 IPEGET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKE-DQEEYSEK 227 (285)
T ss_pred cCCCCc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhh-cccccCcc
Confidence 643322 12335788899999998888999999999999999999999999653221111 111111111 12234445
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHhh
Q 005586 647 EAAKLGKMALVCTHEDPENRP-----TMEAVIEELTVA 679 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~~~ 679 (689)
.+..+.+++..|++.||++|| ++.+++++.+..
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCcc
Confidence 567789999999999999999 888998775443
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-38 Score=342.03 Aligned_cols=255 Identities=14% Similarity=0.254 Sum_probs=203.3
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
..++|...+.||+|+||.||+|+.+ ++..||+|++..... ......|.+|+.+++.++||||+++++++. .....
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~--~~~~~ 118 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ--DDKYL 118 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--cCCEE
Confidence 4567888999999999999999976 689999999965321 223456789999999999999999998884 45789
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++||||+++|+|.+++... .++......++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSMG-----FIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999999999998753 2777888899999999999999987 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCCCCCCCCccccccC----CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 564 HKLLADDIVFSVLKTSAAMGYLAPEYVTTG----RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 564 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
++..............||+.|+|||++.+. .++.++|||||||++|||+||+.||....... .+..+.+...
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~~ 264 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMDHKN 264 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH----HHHHHHcCCC
Confidence 987654332222334688899999998653 47899999999999999999999997543221 1222222211
Q ss_pred CCCCCH--HHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHH
Q 005586 640 KGKFSE--SEAAKLGKMALVCTHEDPEN--RPTMEAVIEELT 677 (689)
Q Consensus 640 ~~~~~~--~~~~~l~~l~~~Cl~~dp~~--RPs~~evl~~L~ 677 (689)
...++. ..+.++.+++..|++.+|++ ||++.|++++.+
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 111222 34678899999999999988 999999988754
No 122
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9e-38 Score=319.39 Aligned_cols=251 Identities=25% Similarity=0.462 Sum_probs=195.3
Q ss_pred cccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|.+. ++..||+|++...........|.+|+.+++.++||||+++++++... .+..++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEecC
Confidence 46899999999999864 24679999986544344567899999999999999999999987543 34578999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++..... .+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||+++.+...
T Consensus 80 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 80 KHGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLASKK-----FVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred CCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 99999999976432 3678888999999999999999887 999999999999999999999999999865433
Q ss_pred ceee---eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCC-CCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 571 IVFS---VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS-LVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 571 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
.... .....++..|+|||++.+..++.++|||||||++|||++|+ .|+....... ....+........+..
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 226 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-----ITVYLLQGRRLLQPEY 226 (262)
T ss_pred cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCc
Confidence 2111 11233456799999998889999999999999999999964 4554321111 1111111111122233
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+..+.+++..||+.+|++||++.||+++|+.+
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 456799999999999999999999999999865
No 123
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.8e-38 Score=321.17 Aligned_cols=251 Identities=23% Similarity=0.442 Sum_probs=197.0
Q ss_pred cccccCCcceEEEEEecC-Cc--EEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLRD-GT--LVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|.+++ |. .+++|.++..........|.+|++++.++ +||||+++++++.. .+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec--CCCceEEEEeC
Confidence 369999999999999863 43 57888887554445556899999999999 89999999999854 46789999999
Q ss_pred CCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEE
Q 005586 491 PKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 558 (689)
Q Consensus 491 ~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl 558 (689)
++|+|.++++.... ....+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-----i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccccceEEEcCCCeEEE
Confidence 99999999976431 1234889999999999999999999887 999999999999999999999
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcc
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
+|||+++...... .......+..|+|||++....++.++|||||||++|||+| |+.||....... ..+.+..
T Consensus 154 ~dfgl~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----~~~~~~~ 226 (270)
T cd05047 154 ADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQ 226 (270)
T ss_pred CCCCCccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-----HHHHHhC
Confidence 9999986432111 1111223567999999988889999999999999999997 999985432111 1111122
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
......+.....++.+++.+||+.+|.+||++.|+++.|..+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 227 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 222222333456789999999999999999999999999764
No 124
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.9e-38 Score=323.73 Aligned_cols=248 Identities=22% Similarity=0.278 Sum_probs=193.9
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||.||+++.+ +|+.||+|++..... ......+..|++++.+++||||+++.+++. .....++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~--~~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE--SKTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe--cCCeEEEEEecCCCC
Confidence 799999999999875 699999999975332 223445677999999999999999999884 357899999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 79 ~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~- 150 (277)
T cd05607 79 DLKYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSMD-----IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT- 150 (277)
T ss_pred CHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHCC-----EEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-
Confidence 99998865432 34889999999999999999999987 99999999999999999999999999987654322
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
.....++..|+|||++.+..++.++||||+||++|||++|+.|+....................... .......++.+
T Consensus 151 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 228 (277)
T cd05607 151 -ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKD 228 (277)
T ss_pred -eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHH
Confidence 2234578899999999988899999999999999999999999864321111111111111111110 11234567899
Q ss_pred HHHHhccCCCCCCCCHHHHHHHH
Q 005586 654 MALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++..|++.||++||+++|+++++
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHhccCHhhCCCCccchhhh
Confidence 99999999999999996655433
No 125
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=8.9e-38 Score=325.64 Aligned_cols=262 Identities=24% Similarity=0.403 Sum_probs=203.1
Q ss_pred ccCCcccccccCCcceEEEEEec-----------------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-----------------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 471 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l 471 (689)
++|+..+.||+|+||.||++... ++..||+|++..........+|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999998532 2457999999865444556789999999999999999999
Q ss_pred eeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCC-------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCC
Q 005586 472 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS-------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLS 544 (689)
Q Consensus 472 ~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk 544 (689)
++++.. .+..++||||+++|+|.+++...... ...+++.+...++.|++.||+|||+.+ |+|||||
T Consensus 85 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-----i~H~dlk 157 (296)
T cd05095 85 LAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-----FVHRDLA 157 (296)
T ss_pred EEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-----eecccCC
Confidence 999854 46789999999999999999764321 124788999999999999999999987 9999999
Q ss_pred CCceeecCCCCeEEecccccccccCCceeee-ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh--CCCCcchh
Q 005586 545 VEKVLIDQQFNPLIADCGLHKLLADDIVFSV-LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT--GSLVLTSS 621 (689)
Q Consensus 545 ~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt--G~~p~~~~ 621 (689)
|+|||+++++.+||+|||+++.+........ .....+..|+|||...++.++.++|||||||++|||+| |..|+...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999987644322111 11233567999999888889999999999999999998 66777533
Q ss_pred HHHHHhhhhhhHhhccc---cCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 622 MRLAAESATFENFIDRN---LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....... ...+..... .....+..++..+.+++.+||+.||++||+|.||++.|+.
T Consensus 238 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIE-NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHH-HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 2111111 111111111 1111223455789999999999999999999999998863
No 126
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=313.99 Aligned_cols=270 Identities=18% Similarity=0.315 Sum_probs=226.9
Q ss_pred cCHHHHHHHhccCCcccccccCCcceEEEEEecC------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEe
Q 005586 399 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 472 (689)
Q Consensus 399 ~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~ 472 (689)
-...++.....+++...++.+|.||.||+|.|++ .+.|-+|.++....+.....|..|...+..+.|||+.++.
T Consensus 274 ~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 274 RRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 3456677777889889999999999999997753 4567788888777667778899999999999999999999
Q ss_pred eEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCC----CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCce
Q 005586 473 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG----SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKV 548 (689)
Q Consensus 473 g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~Ni 548 (689)
+.+.+. ....+++|.++.-|+|..||...++ ..+.++-.+...+|.|++.|++|||..+ |||.||.++|+
T Consensus 354 ~V~ie~-~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-----ViHkDiAaRNC 427 (563)
T KOG1024|consen 354 GVSIED-YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-----VIHKDIAARNC 427 (563)
T ss_pred EEEeec-cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-----cccchhhhhcc
Confidence 999864 5678899999999999999985433 2345777888999999999999999988 99999999999
Q ss_pred eecCCCCeEEecccccccccCC-ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHH
Q 005586 549 LIDQQFNPLIADCGLHKLLADD-IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAA 626 (689)
Q Consensus 549 Ll~~~~~~kl~DfGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~ 626 (689)
++|+..++||+|-.++|.+-+. ..+-.....++..||+||.+....|++++|||||||+||||+| |+.|+..-.
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID---- 503 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID---- 503 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC----
Confidence 9999999999999999976443 3333445567788999999999999999999999999999998 888885421
Q ss_pred hhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 627 ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...++.++....+...|-.+++++..+|..||+.+|++||+++|++..|.+-
T Consensus 504 -PfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 504 -PFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -HHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 2234445555666667788999999999999999999999999999998764
No 127
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.5e-38 Score=321.44 Aligned_cols=255 Identities=24% Similarity=0.482 Sum_probs=203.0
Q ss_pred cCCcccccccCCcceEEEEEec-CC---cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DG---TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
+|...+.||+|+||.||+|.++ ++ ..||+|.+..........+|..|+.++++++||||+++++++. .....++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--~~~~~~l 82 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT--KSRPVMI 82 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC--CCCceEE
Confidence 4566789999999999999975 23 3699999876544445678999999999999999999999984 4567899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++....+ .+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||+++
T Consensus 83 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~~g-----~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 83 ITEFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSEMN-----YVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred EEecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccChheEEEcCCCcEEECCCcccc
Confidence 9999999999999976532 4899999999999999999999987 9999999999999999999999999988
Q ss_pred cccCCceeee----ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 566 LLADDIVFSV----LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 566 ~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
.......... .....+..|+|||++.+..++.++|||||||++||+++ |+.|+....... ..+.+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----~~~~i~~~~~ 229 (269)
T cd05065 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VINAIEQDYR 229 (269)
T ss_pred ccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCCc
Confidence 6643321111 11112346999999998899999999999999999987 999985432211 1111111122
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+.+..+.+++..||+.+|.+||+|.+|+..|+..
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 223344566789999999999999999999999998764
No 128
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-38 Score=339.55 Aligned_cols=260 Identities=14% Similarity=0.251 Sum_probs=205.1
Q ss_pred HHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC
Q 005586 403 EVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG 479 (689)
Q Consensus 403 ~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 479 (689)
++....++|...+.||+|+||.||+++.+ +++.||+|.+..... ......+.+|+.+++.++||||+++++++. .
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~--~ 114 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ--D 114 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--c
Confidence 34445678999999999999999999986 588999999865321 223456889999999999999999999884 4
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
....++||||+++|+|.+++... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~~-----IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSMG-----LIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHEEECCCCCEEEE
Confidence 57899999999999999999653 2788889999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCccccccC----CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG----RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 635 (689)
|||+++.+............+|..|+|||++.+. .++.++||||+||++|||+||+.||....... .+..+.
T Consensus 185 DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~----~~~~i~ 260 (370)
T cd05621 185 DFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG----TYSKIM 260 (370)
T ss_pred ecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH----HHHHHH
Confidence 9999987654332223345688999999998654 37899999999999999999999996543221 223333
Q ss_pred ccccCCCCCH--HHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHh
Q 005586 636 DRNLKGKFSE--SEAAKLGKMALVCTHEDPEN--RPTMEAVIEELTV 678 (689)
Q Consensus 636 ~~~~~~~~~~--~~~~~l~~l~~~Cl~~dp~~--RPs~~evl~~L~~ 678 (689)
+......++. ..+..+.+++..|+..++.+ ||++.|++++.+.
T Consensus 261 ~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~ 307 (370)
T cd05621 261 DHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 307 (370)
T ss_pred hCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence 3221112222 33567888889999865544 8999999998654
No 129
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.2e-38 Score=319.45 Aligned_cols=251 Identities=23% Similarity=0.478 Sum_probs=201.4
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
+|+..+.||+|+||.||+|.+.++..+|+|.+..... ...+|.+|++++.+++|||++++++++. .....++||||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~~v~e~ 80 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCT--ERSPICLVFEF 80 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEc--cCCceEEEEEc
Confidence 4666789999999999999987788999999875432 3457999999999999999999999884 34678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++++|.+++....+ .++|..++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~-----i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 152 (256)
T cd05112 81 MEHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLESSN-----VIHRDLAARNCLVGENQVVKVSDFGMTRFVLD 152 (256)
T ss_pred CCCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccccccceEEEcCCCeEEECCCcceeeccc
Confidence 999999999976432 4789999999999999999999887 99999999999999999999999999886544
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
...........+.+|+|||++.++.++.++||||||+++|||++ |+.|+........ .+.+........+...+
T Consensus 153 ~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 227 (256)
T cd05112 153 DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV-----VETINAGFRLYKPRLAS 227 (256)
T ss_pred CcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH-----HHHHhCCCCCCCCCCCC
Confidence 32222222334568999999988889999999999999999998 8999864321111 11111111111122345
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..+.+++.+||+.+|++||++.||+++|.
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 77999999999999999999999999873
No 130
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.9e-38 Score=317.73 Aligned_cols=251 Identities=26% Similarity=0.418 Sum_probs=204.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|++|.||+|..+ +|+.|++|.+..... .....++.+|++++++++||||+++++++.. .+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD--KGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc--CCEEEEEE
Confidence 3667789999999999999875 689999999875432 3456789999999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.++++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 79 e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~~-----i~h~dl~~~nili~~~~~~~l~df~~~~~~ 151 (256)
T cd08529 79 EYAENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLHSKK-----ILHRDIKSLNLFLDAYDNVKIGDLGVAKLL 151 (256)
T ss_pred EeCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCcceEEEeCCCCEEEcccccceec
Confidence 99999999999986532 35899999999999999999999887 999999999999999999999999998876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...... .....++..|+|||+..+..++.++|||||||++|||+||+.|+........ ...+. .......+...
T Consensus 152 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~ 225 (256)
T cd08529 152 SDNTNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL----ILKII-RGVFPPVSQMY 225 (256)
T ss_pred cCccch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHH-cCCCCCCcccc
Confidence 543221 1223467789999999988899999999999999999999999965432111 11111 11122233355
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...+.+++.+||+.+|++||++.+++++
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 6789999999999999999999999876
No 131
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-37 Score=317.64 Aligned_cols=249 Identities=25% Similarity=0.443 Sum_probs=200.7
Q ss_pred cccccCCcceEEEEEec--C--CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR--D--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|++. + +..||+|.+.........+++.+|+++++++.|+|||++++++. ....++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK---GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc---CCceEEEEEeC
Confidence 46999999999999864 2 36899999987664445678999999999999999999999873 34679999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+++..++.++.|++.||+|||..+ ++||||||+||++++++.+||+|||+++.+...
T Consensus 78 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~~-----i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 78 PLGPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESKH-----FVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred CCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhcC-----eeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 9999999998653 4899999999999999999999887 999999999999999999999999999876443
Q ss_pred ceee--eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 571 IVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 571 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
.... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||....... +...+........+...
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 223 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-----VIAMLESGERLPRPEEC 223 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHcCCcCCCCCCC
Confidence 2211 112223467999999988899999999999999999998 999986432211 11112111122233445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
+..+.+++.+|+..+|++||++.++++.|+...
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 678999999999999999999999999998753
No 132
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.8e-38 Score=334.06 Aligned_cols=259 Identities=20% Similarity=0.354 Sum_probs=197.4
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC---CeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---GECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~---~~~~ 484 (689)
+|...+.||+|+||.||+|+.. +|..||||++..... .....++.+|++++++++||||+++++++..... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4677889999999999999975 689999999875322 2344578999999999999999999998854322 3479
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||++ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHTAN-----VFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 68999887543 4899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCcee--eeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh------------
Q 005586 565 KLLADDIVF--SVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES------------ 628 (689)
Q Consensus 565 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~------------ 628 (689)
+........ ......++..|+|||++.+ ..++.++|||||||++|||+||+.||..........
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 865332111 1123457888999999865 678999999999999999999999985432110000
Q ss_pred -------hhhhHhhc---cccCCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 629 -------ATFENFID---RNLKGKFS---ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 629 -------~~~~~~~~---~~~~~~~~---~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....+.+. +....... ......+.+++.+|++.||++||+++|++++-+.
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 00000000 00000000 1124567899999999999999999999988654
No 133
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.5e-38 Score=339.77 Aligned_cols=253 Identities=19% Similarity=0.297 Sum_probs=204.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|++++..++||||+++++++. ..+..++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--DEEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee--cCCeEEE
Confidence 36788899999999999999976 799999999975432 234567899999999999999999999884 3578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~g-----iiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 79 VMEYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHKLG-----FIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred EEcCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 999999999999998652 4889999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCc----------------------------eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 005586 566 LLADDI----------------------------VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLV 617 (689)
Q Consensus 566 ~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p 617 (689)
...... ........+|..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence 765432 0112234578899999999999999999999999999999999999
Q ss_pred cchhHHHHHhhhhhhHhhc--cccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHH
Q 005586 618 LTSSMRLAAESATFENFID--RNLKGKFSESEAAKLGKMALVCTHEDPENRPT-MEAVIEELT 677 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs-~~evl~~L~ 677 (689)
|........ ...+.. ..+........+.++.+++..|+. ||++||+ +.|++++.+
T Consensus 230 f~~~~~~~~----~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 230 FYSDTLQET----YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred CCCCCHHHH----HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 965432211 111222 111111111236678899999997 9999999 999998754
No 134
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-38 Score=334.39 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=208.4
Q ss_pred cccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 413 EVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
..+.||.|+-|.|-.|++. +|+.+|||++.+... ......+.+||-+|+-+.|||++++++.+ +...++|+|.||
T Consensus 16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw--e~~~~lylvlEy 93 (786)
T KOG0588|consen 16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW--ENKQHLYLVLEY 93 (786)
T ss_pred ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee--ccCceEEEEEEe
Confidence 3578999999999999975 799999999987632 23346788999999999999999999998 456899999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|-|.+++-.++. +.+.+..++..||..|+.|+|..+ |+|||+||+|+|||+.+.+||+|||+|..-.+
T Consensus 94 v~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~~~-----icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHAFN-----ICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred cCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhhhc-----ceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 999999999987653 888999999999999999999988 99999999999999999999999999987665
Q ss_pred CceeeeecCCCCCCCCCccccccCCC-CCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC--CCCHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--KFSES 646 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 646 (689)
+.. .....|++.|.|||++.+.+| ..++||||.|||||.|+||+.||++..- ..++.+.-++ .+|..
T Consensus 165 gkl--LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--------r~LLlKV~~G~f~MPs~ 234 (786)
T KOG0588|consen 165 GKL--LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--------RVLLLKVQRGVFEMPSN 234 (786)
T ss_pred Ccc--ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCcccCCCc
Confidence 542 223568899999999999999 5799999999999999999999986421 2222222222 34667
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+.++.+|+.+|+..||++|.|++||++|.+-.
T Consensus 235 Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 235 ISSEAQDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred CCHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence 788899999999999999999999999997643
No 135
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-37 Score=327.43 Aligned_cols=260 Identities=24% Similarity=0.418 Sum_probs=205.2
Q ss_pred ccCCcccccccCCcceEEEEEec--------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
++|...+.||+|+||.||+|... .+..||+|.++.........++.+|++++.++ +||||++++++|..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ-- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc--
Confidence 46777899999999999999752 24579999988655445567899999999999 69999999999854
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
.+..++||||+++|+|.+++..... ....++|.++++++.|++.||+|||+.+ |+||||||+|
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-----i~H~dlkp~N 164 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-----CIHRDLAARN 164 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-----eeecccccee
Confidence 4678999999999999999976421 1235899999999999999999999987 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
||+++++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.|+.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998765322111 112233457999999988889999999999999999999 888885432111
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
+.+.+........+.....++.+++.+|++.+|++||++.|+++.|+...
T Consensus 245 -----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 245 -----LFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred -----HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11111111122233445667889999999999999999999999998764
No 136
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4e-38 Score=332.33 Aligned_cols=245 Identities=20% Similarity=0.313 Sum_probs=197.0
Q ss_pred cccccCCcceEEEEEe----cCCcEEEEEEecccCC---chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 415 NLLGKGNFSSVYKGTL----RDGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+.||+|+||.||+++. .+++.||+|+++.... ......+.+|++++++++||||+++++++.. .+..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeEEEEE
Confidence 5799999999999985 3588999999975421 2334567899999999999999999998854 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++.... .+.+..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 80 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 80 EYLSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLHQQG-----IIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred eCCCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 9999999999997643 3778888999999999999999987 999999999999999999999999998754
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ...+...
T Consensus 151 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----~~~~~~~~~--~~~~~~~ 223 (323)
T cd05584 151 IHEGT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----TIDKILKGK--LNLPPYL 223 (323)
T ss_pred ccCCC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH----HHHHHHcCC--CCCCCCC
Confidence 32211 1123457889999999998889999999999999999999999996543221 112222211 1233444
Q ss_pred HHHHHHHHHHhccCCCCCCC-----CHHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRP-----TMEAVIEELT 677 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~ 677 (689)
..++.+++.+|++.||++|| ++.+++++.+
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~ 258 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence 66789999999999999999 8999887643
No 137
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.4e-38 Score=324.48 Aligned_cols=258 Identities=22% Similarity=0.417 Sum_probs=204.2
Q ss_pred hccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
.++|...+.||+|+||.||+|..+ ++..||+|++..........+|.+|+.++++++||||+++++++.. .+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV--GK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--CC
Confidence 456888899999999999999863 4688999999765544455789999999999999999999999843 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCC------------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCC
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEG------------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 543 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dl 543 (689)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ ++||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-----i~H~dl 156 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-----FVHRDL 156 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-----eecccc
Confidence 78999999999999999975321 1124789999999999999999999887 999999
Q ss_pred CCCceeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchh
Q 005586 544 SVEKVLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSS 621 (689)
Q Consensus 544 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~ 621 (689)
||+||++++++.+||+|||+++.+....... ......+..|+|||.+.+..++.++|||||||++|||++ |..|+...
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999987654332111 112234567999999988899999999999999999998 87787543
Q ss_pred HHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 622 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.... ....+.+... ...+...+.++.+++.+|++.+|++||++.|+++.|+
T Consensus 237 ~~~~----~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 237 AHEE----VIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CHHH----HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 2211 1111111111 1123345678999999999999999999999999886
No 138
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-38 Score=337.22 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=203.0
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||++..+ +|+.||+|+++.... ......+.+|+.+++.++|+||+++++++.. .+..++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD--KDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCeEEE
Confidence 36788899999999999999875 689999999986532 2344678899999999999999999998844 468999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... ..+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~-----i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVHQMG-----YVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred EECCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eEcccCchHheEECCCCCEEeccCCCCe
Confidence 999999999999997653 24899999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccc------cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVT------TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
.+............++..|+|||++. ...++.++|||||||++|||++|+.||....... .+..+.....
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----~~~~i~~~~~ 226 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK----TYNNIMNFQR 226 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH----HHHHHHcCCC
Confidence 76544332333346788999999986 4567899999999999999999999996542221 1122221111
Q ss_pred CCCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 640 KGKFS--ESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 640 ~~~~~--~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
...++ ...+..+.+++..|++ +|++||++.+++++-+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 227 FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 11111 1245678899999998 9999999999997644
No 139
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.7e-38 Score=319.32 Aligned_cols=255 Identities=27% Similarity=0.498 Sum_probs=207.0
Q ss_pred hccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.++|...+.||+|+||.||+|..+++..||||.+.... ....++.+|+.++++++|+||+++++++.. ....++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeec--CCceEEEE
Confidence 35677889999999999999998888899999987653 234679999999999999999999998843 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++....+ ..+++.++..++.+++.||+|||+.+ ++|+||||+||++++++.+|++|||+++.+
T Consensus 81 e~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~~-----i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 81 EYMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESRN-----YIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred eccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCcchheEEEcCCCCEEECccccceec
Confidence 99999999999986542 34899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
.............+..|+|||.+.+..++.++|||||||++||++| |+.||....... ... .+........+..
T Consensus 154 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~-~~~~~~~~~~~~~ 228 (261)
T cd05034 154 EDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE----VLE-QVERGYRMPRPPN 228 (261)
T ss_pred cchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH-HHHcCCCCCCCCC
Confidence 5432222222334567999999998889999999999999999999 999985432111 111 1111222223334
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 46689999999999999999999999998864
No 140
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.2e-37 Score=317.44 Aligned_cols=249 Identities=23% Similarity=0.435 Sum_probs=201.4
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|..+ |..||+|.+.... ..+.|.+|+.++++++|+|++++++++... ....++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEEEEE
Confidence 35777899999999999999876 7889999986532 345799999999999999999999987543 456899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.++++.... ..++|..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 81 YMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEANN-----FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred CCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----EeccccchheEEEcCCCcEEecCCccceecc
Confidence 9999999999976532 34889999999999999999999987 9999999999999999999999999988654
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
... .....+..|+|||++.+..++.++|||||||++|||++ |+.|+....... ....+........+...
T Consensus 154 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 224 (256)
T cd05082 154 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGC 224 (256)
T ss_pred ccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCCC
Confidence 321 12234567999999988889999999999999999998 998885421111 11111112222333445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..+.+++.+|++.+|++||++.+++++|+.
T Consensus 225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 225 PPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 6789999999999999999999999999875
No 141
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.2e-37 Score=319.88 Aligned_cols=254 Identities=22% Similarity=0.352 Sum_probs=191.2
Q ss_pred ccccCCcceEEEEEecC---CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 416 LLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.||+|+||.||+|...+ ...+|+|.+...........|.+|++.++.++|+||+++++++.. ....++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceEEEEEeCCC
Confidence 59999999999997643 457888988765544556788999999999999999999999843 5679999999999
Q ss_pred CCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 493 GKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 493 gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
|+|.+++...... ....++...+.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-----FIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-----EecccccHhheEecCCCcEEEeccccccccccch
Confidence 9999999775432 233578888999999999999999987 9999999999999999999999999987543322
Q ss_pred ee-eeecCCCCCCCCCcccccc-------CCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 572 VF-SVLKTSAAMGYLAPEYVTT-------GRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 572 ~~-~~~~~~~~~~y~aPE~~~~-------~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
.. ......++..|+|||++.. ..++.++|||||||++|||++ |+.|+..............+...+.....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 11 1222334567999998643 356889999999999999999 77787543221111111111000001112
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.+......+.+++..|| .||++||+++||++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 23344567788889998 59999999999998873
No 142
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.7e-37 Score=320.67 Aligned_cols=263 Identities=25% Similarity=0.451 Sum_probs=210.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
.+|...+.||+|+||.||+|..+ +|. .||+|.+..........++.+|+..+++++||||++++++|.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cce
Confidence 35667789999999999999875 333 6899988776544555789999999999999999999999854 578
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~-----i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEEKR-----LVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCC-----EEecccCcceEEEcCCCeEEECCCcc
Confidence 999999999999999986543 3899999999999999999999977 99999999999999999999999999
Q ss_pred cccccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++....... ........+..|+|||.+....++.++|||||||++||++| |+.|+....... +.+.+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~ 230 (279)
T cd05057 156 AKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-----IPDLLEKGERL 230 (279)
T ss_pred cccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhCCCCC
Confidence 987653321 11112223467999999988889999999999999999999 999986542211 11122211112
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcccccc
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 687 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~~ 687 (689)
..+..+...+.+++..||..+|.+||++.++++.|.......+.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~ 276 (279)
T cd05057 231 PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQRYL 276 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcceE
Confidence 2233455678999999999999999999999999998876665543
No 143
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.3e-38 Score=320.24 Aligned_cols=260 Identities=20% Similarity=0.340 Sum_probs=206.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|... +|..+|||.+..... .....+|.+|+.+++.++|+||+++++++.. .+..++|
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 80 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNIV 80 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--CCeEEEE
Confidence 5677789999999999999964 799999998875432 2344689999999999999999999999855 4688999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++++|.+++.........++|..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dl~p~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-----VMHRDIKPANVFITATGVVKLGDLGLGRF 155 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCCEEECcchhhhc
Confidence 9999999999998754333446899999999999999999999987 99999999999999999999999999886
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
...... ......++..|+|||++.+..++.++||||||+++|||++|+.|+........ .....+............
T Consensus 156 ~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (267)
T cd08229 156 FSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY--SLCKKIEQCDYPPLPSDH 232 (267)
T ss_pred cccCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH--HHhhhhhcCCCCCCCccc
Confidence 644321 11223467789999999888899999999999999999999999854321100 011111111111111234
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
....+.+++.+||+.+|++||||.+|++.++..
T Consensus 233 ~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 233 YSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 566899999999999999999999999998764
No 144
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=330.83 Aligned_cols=253 Identities=19% Similarity=0.342 Sum_probs=213.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|...+.+|+|+||.++..+.+ +++.+|+|.+...... ..++...+|+.++++++|||||.+.+.+.++ ....+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~-~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED-GQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-CceEEEE
Confidence 45677889999999999999876 6889999999876643 3445788999999999999999999988553 3348999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|+|++||+|.+.+....+ ..+++...+.+..|++.|+.|||+.. |+|||||+.||+++++..+||+|||+|+.
T Consensus 83 m~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH~~~-----iLHRDlK~~Nifltk~~~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLHENR-----VLHRDLKCANIFLTKDKKVKLGDFGLAKI 155 (426)
T ss_pred EeecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhhh-----hhcccchhhhhhccccCceeecchhhhhh
Confidence 999999999999987653 35889999999999999999999876 99999999999999999999999999999
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
+..+.. ......||+.||.||.+.+.+|..|+|+||+||++|||++-+.+|...........+. +......+..
T Consensus 156 l~~~~~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~-----~~~~~Plp~~ 229 (426)
T KOG0589|consen 156 LNPEDS-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN-----RGLYSPLPSM 229 (426)
T ss_pred cCCchh-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh-----hccCCCCCcc
Confidence 977642 2234679999999999999999999999999999999999999997543332222222 2223345677
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.+.++..++..|++.+|+.||++.+++.+
T Consensus 230 ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 230 YSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 78899999999999999999999999987
No 145
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-37 Score=319.21 Aligned_cols=256 Identities=23% Similarity=0.433 Sum_probs=205.2
Q ss_pred ccCCcccccccCCcceEEEEEecC----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|...+.||+|+||.||+|...+ ...||+|...........+.|.+|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CCcE
Confidence 346677899999999999998653 346899988766544455689999999999999999999998843 4578
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|.+++.... ..+++..++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~-----~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLESKR-----FVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccChheEEEecCCCeEEccCcee
Confidence 9999999999999997643 24899999999999999999999887 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
+..............++..|+|||.+....++.++|||||||++||+++ |+.||........ ... +........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~----~~~-~~~~~~~~~ 229 (270)
T cd05056 155 RYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV----IGR-IENGERLPM 229 (270)
T ss_pred eecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH----HHH-HHcCCcCCC
Confidence 8765543322223334567999999988889999999999999999996 9999864422111 111 111111123
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
+...+..+.+++.+|+..+|++||++.++++.|....
T Consensus 230 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 230 PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3445678999999999999999999999999998754
No 146
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.7e-37 Score=317.07 Aligned_cols=253 Identities=23% Similarity=0.448 Sum_probs=204.5
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|...++..+|+|.+.... .....|.+|++++++++|+||+++.+++.. ...++|||
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~v~e 80 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYIITE 80 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEEEEE
Confidence 4677789999999999999998888889999887542 344679999999999999999999998844 56899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.+++..... ..++|.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~-----i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 81 FMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQRN-----YIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred eCCCCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHHhCC-----ccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 9999999999976432 34889999999999999999999877 9999999999999999999999999998665
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...........++..|+|||++....++.++|||||||++||++| |+.|+........ .+.+........+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~ 228 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMPRPENC 228 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhCCCCCCCcccC
Confidence 432222222334567999999988889999999999999999999 8988864322111 1111122222233445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 229 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 229 PEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 6679999999999999999999999999864
No 147
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.3e-37 Score=317.78 Aligned_cols=254 Identities=19% Similarity=0.313 Sum_probs=188.3
Q ss_pred ccccCCcceEEEEEecCC---cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 416 LLGKGNFSSVYKGTLRDG---TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~~g---~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.||+|+||.||+|...++ ..+++|.+...........|.+|+.+++.++||||++++++|.. ....++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEEEEecCCC
Confidence 599999999999986433 35667777655444556789999999999999999999999854 4678999999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc-
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI- 571 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 571 (689)
|+|.++++........+++.....++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-----i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-----FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-----eeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 9999999865433334677788899999999999999887 9999999999999999999999999986432221
Q ss_pred eeeeecCCCCCCCCCcccccc-------CCCCCcccchhHHHHHHHHHhC-CCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 572 VFSVLKTSAAMGYLAPEYVTT-------GRFTERSDIFAFGVIILQILTG-SLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~-------~~~~~ksDV~sfGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
........++..|+|||++.. ..++.++|||||||++|||+++ ..|+..............+..-...+...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 111123346678999998743 2457899999999999999974 66774322211111111110000011122
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.......+.+++..|| .+|++||+++||++.|.
T Consensus 235 ~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2234567888999999 57999999999999874
No 148
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.8e-38 Score=333.89 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=196.3
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
+.||+|+||.||++..+ +|..||+|.+..... ......+..|++++..++||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCC
Confidence 36999999999999875 789999999975432 2334577889999999999999999998844 578999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
+|+|..++.... .+++..+..++.|++.||+|||+ .+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~~-----ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 79 GGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN-----VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcCC-----EEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 999999887543 48999999999999999999997 55 999999999999999999999999998754322
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... ..++.....+
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~~~~ 222 (325)
T cd05594 150 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEE--IRFPRTLSPE 222 (325)
T ss_pred Cc-ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHH
Confidence 11 11234578899999999988999999999999999999999999965322111 11111111 1233344567
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHHHHHH
Q 005586 651 LGKMALVCTHEDPENRP-----TMEAVIEELT 677 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RP-----s~~evl~~L~ 677 (689)
+.+++.+|++.||++|+ ++.+++++.+
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 89999999999999996 8999987744
No 149
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.2e-38 Score=326.67 Aligned_cols=258 Identities=25% Similarity=0.431 Sum_probs=204.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCc----EEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|+||.||+|... +|. .||+|.+..........+|.+|+.++++++||||++++|+|.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---~~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS---PTI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC---CCc
Confidence 45677889999999999999864 443 5789988765544445679999999999999999999999854 346
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~-----ivH~dikp~Nill~~~~~~kL~Dfg~ 155 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEERR-----LVHRDLAARNVLVKSPNHVKITDFGL 155 (303)
T ss_pred eeeehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhhcC-----eeccccccceeeecCCCceEEccccc
Confidence 799999999999999976432 4889999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++.+...... ......++..|+|||++.+..++.++|||||||++|||++ |+.|+....... ..+.+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~ 230 (303)
T cd05110 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----IPDLLEKGERL 230 (303)
T ss_pred cccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCC
Confidence 9876533211 1222334568999999988899999999999999999998 888886432111 11222222111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
..+..+...+.+++..||..+|++||+|+++++.|+.+...
T Consensus 231 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 22333456789999999999999999999999999886533
No 150
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.7e-37 Score=317.42 Aligned_cols=254 Identities=19% Similarity=0.300 Sum_probs=204.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc----hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK----SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|++|.||+|... ++..||+|.+...... .....+.+|++++.+++||||+++++++.. .+..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD--DETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc--CCeE
Confidence 46788899999999999999865 6899999998754321 233578899999999999999999999854 4689
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++|+||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~-----i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSNM-----IVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred EEEEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEeeccc
Confidence 99999999999999987643 3788999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCceeee--ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIVFSV--LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++.......... ....++..|+|||.+.+..++.++||||||+++|||++|+.||....... ............
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~ 226 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA----AIFKIATQPTNP 226 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH----HHHHHhccCCCC
Confidence 976543221111 22345678999999999889999999999999999999999986432211 111122222233
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..+......+.+++..||..+|.+||++.|++++.+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 345556678999999999999999999999998753
No 151
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.4e-38 Score=337.93 Aligned_cols=253 Identities=18% Similarity=0.254 Sum_probs=196.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.|...+.||+|+||.||+|+.. +++.||+|++..... ......+.+|++++.+++||||+++++++.+ .+..++|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 5778899999999999999875 689999999976432 2344678999999999999999999999854 5789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~E~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~g-----ivHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 80 MDYIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKMG-----FIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 99999999999997643 3888889999999999999999987 99999999999999999999999999764
Q ss_pred ccCCce----------------------------------------------eeeecCCCCCCCCCccccccCCCCCccc
Q 005586 567 LADDIV----------------------------------------------FSVLKTSAAMGYLAPEYVTTGRFTERSD 600 (689)
Q Consensus 567 ~~~~~~----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ksD 600 (689)
+..... .......||..|+|||++.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCD 230 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccc
Confidence 321000 0001235788999999999888999999
Q ss_pred chhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc--ccCCCCCHHHHHHHHHHHHH--hccCCCCCCCCHHHHHHHH
Q 005586 601 IFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAKLGKMALV--CTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 601 V~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~--Cl~~dp~~RPs~~evl~~L 676 (689)
||||||++|||+||+.||......... ..++.. ............++.+++.+ |+..+|..||++.|++.+-
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp 306 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTPTETQ----LKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP 306 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCHHHHH----HHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence 999999999999999999654322111 111111 11111111234456666655 6667777799999999875
Q ss_pred H
Q 005586 677 T 677 (689)
Q Consensus 677 ~ 677 (689)
+
T Consensus 307 ~ 307 (381)
T cd05626 307 F 307 (381)
T ss_pred c
Confidence 4
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2e-37 Score=315.78 Aligned_cols=249 Identities=23% Similarity=0.461 Sum_probs=205.0
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++.. ....++|||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 80 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYIVTE 80 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEEEEE
Confidence 45677789999999999999876 78999999976542 45789999999999999999999999854 577899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++..... ..++|..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||.++...
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~-----i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 81 YMAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEKN-----FVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred ecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccchhcccceEEEeCCCCEEEcccccccccc
Confidence 9999999999976542 24899999999999999999999987 9999999999999999999999999998764
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
.... ....+..|+|||++.+..++.++||||||+++||+++ |+.|+....... +.+.+....+...+...
T Consensus 154 ~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 224 (256)
T cd05039 154 QGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKGYRMEAPEGC 224 (256)
T ss_pred cccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcCCCCCCccCC
Confidence 3221 2334567999999988889999999999999999997 999986432211 11111122222333445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..+.+++.+|+..+|++||++.|++++|+.
T Consensus 225 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 225 PPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 6789999999999999999999999999975
No 153
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.3e-38 Score=335.38 Aligned_cols=253 Identities=18% Similarity=0.283 Sum_probs=193.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++.+++|+||+++++.+.+ ....++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEE
Confidence 46888899999999999999875 689999999975431 2233578889999999999999999998844 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g-----ivHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 79 IMEFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQLG-----FIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred EEcCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 999999999999997643 4899999999999999999999988 9999999999999999999999999997
Q ss_pred cccCCcee----------------------------------eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHH
Q 005586 566 LLADDIVF----------------------------------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 611 (689)
Q Consensus 566 ~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~el 611 (689)
.+...... ......||..|+|||++.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence 65321100 01123588899999999998999999999999999999
Q ss_pred HhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH--HHHHHHHHHHHH--hccCCCCCCCCHHHHHHHH
Q 005586 612 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE--SEAAKLGKMALV--CTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 612 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~--Cl~~dp~~RPs~~evl~~L 676 (689)
++|+.||......... ..+........++. ....++.+++.+ |...++..||++.|++++-
T Consensus 230 l~G~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 230 LIGYPPFCSETPQETY----KKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred HhCCCCCCCCCHHHHH----HHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence 9999999654322211 11111000001111 123345555554 3333444679999999873
No 154
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.5e-38 Score=321.43 Aligned_cols=257 Identities=22% Similarity=0.378 Sum_probs=201.5
Q ss_pred HHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC----
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG---- 479 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~---- 479 (689)
.+++.|+..+.||+|+||.||+|... +++.||+|++.... ....++..|+.++.++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 35677888899999999999999875 68899999987543 3345788999999998 7999999999986532
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
....++||||+++|+|.+++..... ..++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~-----ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQHK-----VIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCHHHEEECCCCCEEEc
Confidence 2468999999999999999986432 35889999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 634 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 634 (689)
|||+++....... ......++..|+|||++. ...++.++|||||||++|||++|+.|+.......... ..
T Consensus 154 Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~ 228 (272)
T cd06637 154 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LI 228 (272)
T ss_pred cCCCceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HH
Confidence 9999986543211 122234677899999986 3457889999999999999999999986432211111 01
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 635 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 635 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.............+.++.+++.+||..+|.+||++.|++++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 270 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHP 270 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence 111111111223456789999999999999999999998763
No 155
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.7e-38 Score=345.41 Aligned_cols=259 Identities=19% Similarity=0.295 Sum_probs=195.8
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcC------C
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR------G 479 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~ 479 (689)
..++|...+.||+|+||.||+|... +++.||||++.... ....+|+.++++++|||||++++++... .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 3467888999999999999999975 68999999886432 2345799999999999999999886432 1
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeEE
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLI 558 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl 558 (689)
....++||||++ ++|.+++.........+++.....++.|++.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-----IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-----ICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCcCHHHEEEcCCCCceee
Confidence 124678999997 5787777643333345899999999999999999999987 99999999999999664 7999
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-----
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE----- 632 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~----- 632 (689)
+|||+++.+..... .....++..|+|||++.+ ..++.++|||||||++|||+||+.||..............
T Consensus 213 ~DFGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p 290 (440)
T PTZ00036 213 CDFGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTP 290 (440)
T ss_pred eccccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 99999987644321 123456788999999865 4689999999999999999999999965322111100000
Q ss_pred ---H--hhcc-------------ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 633 ---N--FIDR-------------NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 633 ---~--~~~~-------------~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
. ...+ .+...++...+.++.+++.+||+.||++||++.|++++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f 354 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence 0 0000 00111222335678999999999999999999999988664
No 156
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=335.33 Aligned_cols=253 Identities=18% Similarity=0.236 Sum_probs=197.0
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.++|+..+.||+|+||.||+|... +++.||+|... ...+.+|++++++++|||||++++++.. ....++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTY--NKFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEE--CCeeEEE
Confidence 367999999999999999999875 68999999643 2357789999999999999999998854 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
+||+. ++|..++.... .+++.+++.|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 162 ~e~~~-~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~~~-----IvHrDiKP~NIll~~~~~vkL~DFG~a~~ 231 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHENR-----IIHRDIKAENIFINHPGDVCLGDFGAACF 231 (391)
T ss_pred EecCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCChHhEEEcCCCCEEEEeCCcccc
Confidence 99995 78998886543 3889999999999999999999987 99999999999999999999999999975
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHH-------HHh------------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL-------AAE------------ 627 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~-------~~~------------ 627 (689)
.............+|+.|+|||++.+..++.++|||||||++|||+||+.|+...... ...
T Consensus 232 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 232 PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred cccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 4332222223456889999999999889999999999999999999999876421100 000
Q ss_pred ------hhhhhHhh----ccccC--CCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 628 ------SATFENFI----DRNLK--GKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 628 ------~~~~~~~~----~~~~~--~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+.. ..... ...+ ...+.++.+++.+|++.||++|||++|++++-+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 312 EFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred hcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 00000000 00000 0000 12355788999999999999999999999887654
No 157
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.8e-37 Score=320.66 Aligned_cols=256 Identities=24% Similarity=0.418 Sum_probs=202.2
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
.+|...+.||+|+||.||++... ++..+|+|.+.... ......|.+|++++++++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTE--GRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEec--CCc
Confidence 35666789999999999999742 46689999887544 4455689999999999999999999999854 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC-----------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS-----------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 551 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~-----------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~ 551 (689)
.++||||+++|+|.++++..... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-----i~H~dlkp~nil~~ 156 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-----FVHRDLATRNCLVG 156 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-----eecccccHhhEEEc
Confidence 89999999999999999764321 134899999999999999999999987 99999999999999
Q ss_pred CCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 005586 552 QQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 629 (689)
Q Consensus 552 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~ 629 (689)
+++.+||+|||+++.+....... .....++..|+|||++.+..++.++|||||||++|||++ |+.|+........
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--- 233 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--- 233 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---
Confidence 99999999999998654332211 112234567999999998899999999999999999999 8888854322111
Q ss_pred hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 630 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
... +........+...+..+.+++.+||+.||++||++.||++.|+
T Consensus 234 -~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 234 -IEC-ITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHH-HHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111 1111111223344567899999999999999999999999886
No 158
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.8e-38 Score=330.34 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=194.3
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHH---HhccCCCcceeEeeEEEcCCCCeEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYL---LTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~---l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
|...+.||+|+||.||+|..+ +|+.||||+++.... ....+.+..|+++ +++++||||+++++++.. .+..+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~--~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT--EDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--CCEEE
Confidence 456789999999999999875 689999999975431 2233456666655 457789999999998843 57899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++|+|..+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 79 lv~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~-----ivHrdlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05589 79 FVMEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHENK-----IVYRDLKLDNLLLDTEGFVKIADFGLC 148 (324)
T ss_pred EEEcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEecCCCHHHeEECCCCcEEeCcccCC
Confidence 999999999999888642 3899999999999999999999987 999999999999999999999999998
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
+....... ......++..|+|||.+.+..++.++|||||||++|||++|+.||........ ...+.... ..++
T Consensus 149 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~----~~~i~~~~--~~~p 221 (324)
T cd05589 149 KEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV----FDSIVNDE--VRYP 221 (324)
T ss_pred ccCCCCCC-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCC--CCCC
Confidence 75422111 11234578899999999998999999999999999999999999965422111 11111111 1233
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHH
Q 005586 645 ESEAAKLGKMALVCTHEDPENRP-----TMEAVIEEL 676 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L 676 (689)
...+..+.+++.+|++.||++|| ++.+++++.
T Consensus 222 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 222 RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 44466788999999999999999 577777654
No 159
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-37 Score=320.72 Aligned_cols=252 Identities=19% Similarity=0.313 Sum_probs=199.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||+|+||.||+|... ++..||+|++..........+|.+|++++.+++||||+++++++.. .+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--ENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE--CCEEEEEEe
Confidence 5677789999999999999864 7899999998765434455689999999999999999999999855 467899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|..+. .+++.....++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||++....
T Consensus 80 ~~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~ 146 (279)
T cd06619 80 FMDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSLK-----ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV 146 (279)
T ss_pred cCCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCC-----EeeCCCCHHHEEECCCCCEEEeeCCcceecc
Confidence 99999997652 2678888999999999999999987 9999999999999999999999999998654
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH---hhhhhhHhhccccCCCCCH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA---ESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 645 (689)
... .....++..|+|||++.+..++.++|||||||++|||+||+.||........ .........+.........
T Consensus 147 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (279)
T cd06619 147 NSI---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG 223 (279)
T ss_pred ccc---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC
Confidence 322 1223577889999999988999999999999999999999999864221110 0011111111111111112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
....++.+++.+|++.+|++||+++|++++.+..
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 2345789999999999999999999999886543
No 160
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.3e-38 Score=328.42 Aligned_cols=243 Identities=19% Similarity=0.305 Sum_probs=191.0
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|..+ +++.||+|+++.... ......+..|..++... +||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36999999999999975 588999999975421 22334566677777654 89999999998843 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~gg~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~~-----ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 79 NGGDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHKKG-----IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG 149 (316)
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEeCCCCHHHeEECCCCCEEEccCcCCeECCCC
Confidence 9999999987643 3888999999999999999999987 999999999999999999999999999764322
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
. .......+|..|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ....++.....+
T Consensus 150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~ 222 (316)
T cd05592 150 E-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL----FDSILN--DRPHFPRWISKE 222 (316)
T ss_pred C-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHH
Confidence 2 122234578899999999988999999999999999999999999965322111 111111 112234445567
Q ss_pred HHHHHHHhccCCCCCCCCHH-HHHHH
Q 005586 651 LGKMALVCTHEDPENRPTME-AVIEE 675 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~-evl~~ 675 (689)
+.+++..||+.||++||++. +++++
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcC
Confidence 88999999999999999875 55543
No 161
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-37 Score=329.28 Aligned_cols=260 Identities=23% Similarity=0.410 Sum_probs=205.8
Q ss_pred ccCCcccccccCCcceEEEEEec--------CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
.+|...+.||+|+||.||+|... .+..||+|.+..........+|.+|++++.++ +||||++++++|..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc--
Confidence 35777899999999999999752 12478999887654444567899999999999 89999999999854
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
.+..++||||+++|+|.+++..... ....++|.+++.++.|++.||+|||+.+ |+||||||+|
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-----ivH~dlkp~N 164 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-----CIHRDLAARN 164 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-----eeccccccce
Confidence 4678999999999999999975421 1235899999999999999999999987 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHH
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 625 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~ 625 (689)
|++++++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.|+.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999998665432111 112233457999999998899999999999999999998 888875432111
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
+...+........+...+.++.+++.+|++.+|++||+|.|+++.|+.+.
T Consensus 245 -----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 245 -----LFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred -----HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11112222222333445668999999999999999999999999998765
No 162
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.6e-38 Score=331.94 Aligned_cols=248 Identities=16% Similarity=0.268 Sum_probs=194.6
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +++.||+|+++.... ......+..|+.++.++ +||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeCC
Confidence 46999999999999976 688999999986432 23345678888888877 89999999998854 47899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++..+..|+.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 79 NGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHERG-----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCHHHEEECCCCCEEEeeCCccccccCC
Confidence 9999999886543 4899999999999999999999987 999999999999999999999999998754221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHH-----HhhhhhhHhhccccCCCCCH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA-----AESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 645 (689)
.. ......+|..|+|||++.+..++.++|||||||++|||+||+.||....... ........+... ...++.
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~ 226 (329)
T cd05618 150 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPR 226 (329)
T ss_pred CC-ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCC
Confidence 11 1123457889999999999999999999999999999999999985211000 000011111111 123445
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC------HHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPT------MEAVIEEL 676 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs------~~evl~~L 676 (689)
..+.++.+++.+|++.||++||+ +.+++++-
T Consensus 227 ~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 227 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 55678899999999999999998 57877663
No 163
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.8e-37 Score=323.73 Aligned_cols=259 Identities=19% Similarity=0.319 Sum_probs=203.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||++... +|..+|+|.+..........++.+|++++.+++||||+++++++.. .+..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEEe
Confidence 36788899999999999999875 6888999998765433345678999999999999999999999854 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
||+++++|.++++... .+++..+..++.|+++||+|||+. + ++||||||+||++++++.+||+|||+++.
T Consensus 79 ey~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 79 EHMDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLREKHK-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred eccCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhCC-----EEECCCChHHEEEecCCcEEEccCCCccc
Confidence 9999999999997642 488999999999999999999973 4 99999999999999999999999999876
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh---h-------------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA---T------------- 630 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~---~------------- 630 (689)
...... ....++..|+|||.+.+..++.++|||||||++|||+||+.|+........... .
T Consensus 150 ~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 150 LIDSMA---NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred cccccc---ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 543211 223467789999999888899999999999999999999999853221110000 0
Q ss_pred ------------hhHhhccc---cCCCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 631 ------------FENFIDRN---LKGKFS-ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 631 ------------~~~~~~~~---~~~~~~-~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
..+..+.. .....+ .....++.+++.+|++.+|++||++.||+++.+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000 000011 1134568999999999999999999999999876543
No 164
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5.1e-38 Score=337.38 Aligned_cols=253 Identities=17% Similarity=0.259 Sum_probs=199.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ......+.+|++++..++||||+++++++.. .+..++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD--ENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCeEEE
Confidence 36888899999999999999976 689999999975421 2334568899999999999999999998844 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~-----ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 79 IMEYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHKLG-----YIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred EECCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCCHHHeEECCCCCEEEeecccce
Confidence 999999999999997643 3899999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCcee-------------------------------------eeecCCCCCCCCCccccccCCCCCcccchhHHHHH
Q 005586 566 LLADDIVF-------------------------------------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVII 608 (689)
Q Consensus 566 ~~~~~~~~-------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl 608 (689)
.+...... ......||+.|+|||++....++.++|||||||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 229 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHH
Confidence 65321100 00113478899999999988999999999999999
Q ss_pred HHHHhCCCCcchhHHHHHhhhhhhHhhcc--ccCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHHHHH
Q 005586 609 LQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELT 677 (689)
Q Consensus 609 ~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs---~~evl~~L~ 677 (689)
|||++|+.||........ ...+... .+........+..+.+++.+|+. +|.+|++ +.|++++-+
T Consensus 230 ~el~~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 230 YEMLVGYPPFCSDNPQET----YRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred HHhhcCCCCCCCCCHHHH----HHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 999999999965432211 1111111 11101111234567888888886 9999998 999988754
No 165
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.5e-38 Score=337.41 Aligned_cols=260 Identities=19% Similarity=0.263 Sum_probs=198.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC---CeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---GECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~---~~~~ 484 (689)
+|+..+.||+|+||.||+|... +|+.||+|++..... ....+++.+|++++..++||||+++++++..... ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4677899999999999999974 799999999865422 2344678899999999999999999999854321 2689
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+|+||+. ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~-----ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP----QPLSSDHVKVFLYQILRGLKYLHSAG-----ILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 6888887643 24899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh-------------
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT------------- 630 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~------------- 630 (689)
+..............++..|+|||++.+. .++.++|||||||++|||++|+.||............
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 86543322222233567789999998764 4789999999999999999999999643211110000
Q ss_pred -----hhHhhcc-ccCC-------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 631 -----FENFIDR-NLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 631 -----~~~~~~~-~~~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
....+.. .... ........++.+++.+|++.||++|||+.|++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 292 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLD 292 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhC
Confidence 0000000 0000 01122356788999999999999999999999886543
No 166
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.8e-37 Score=318.46 Aligned_cols=252 Identities=27% Similarity=0.466 Sum_probs=199.2
Q ss_pred cccccCCcceEEEEEecC-------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 415 NLLGKGNFSSVYKGTLRD-------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+.||+|+||.||+|...+ +..+|+|.+..........+|.+|++++++++||||+++++++.. .+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CCCeEEEE
Confidence 369999999999998752 257999988765433456789999999999999999999999844 46789999
Q ss_pred EcCCCCCHHHHhhhcCCC---CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-----CeEEe
Q 005586 488 DFAPKGKLSKYLDQEEGS---SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-----NPLIA 559 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~---~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-----~~kl~ 559 (689)
||+++|+|.++++..... ...++|.+++.++.|++.||+|||+.+ ++|+||||+||+++.+. .+|++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-----i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-----FIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-----cccCCCChheEEEecCCCCCCcceEEC
Confidence 999999999999754321 234889999999999999999999887 99999999999999887 89999
Q ss_pred cccccccccCCceee-eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcc
Q 005586 560 DCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 560 DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|||+++......... ......+..|+|||++.++.++.++|||||||++|||+| |+.|+....... ....+..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~ 228 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-----VLQHVTA 228 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-----HHHHHhc
Confidence 999998654332211 112234567999999999999999999999999999998 999985432211 1111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
......+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 22222334456788999999999999999999999999863
No 167
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.9e-37 Score=314.73 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=200.3
Q ss_pred cccccCCcceEEEEEecC--C--cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLRD--G--TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|++|.||+|.+.+ + ..||+|.+.........+.|.+|++++++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEec
Confidence 468999999999998753 3 36999999876644556789999999999999999999999854 6789999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++..... ..++|...+.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.....
T Consensus 78 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~-----i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 78 PLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESKR-----FIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred CCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhCC-----ccccccCcccEEEecCCEEEecccccccccccc
Confidence 99999999987542 35899999999999999999999987 999999999999999999999999999876542
Q ss_pred cee--eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 571 IVF--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 571 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
... ......++..|+|||++.+..++.++|||||||++|||+| |+.|+........ ...+.........+...
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~ 226 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI----LKKIDKEGERLERPEAC 226 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhcCCcCCCCccC
Confidence 211 1112345678999999988899999999999999999999 9999854322111 11111111112223345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 678999999999999999999999999875
No 168
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.2e-38 Score=329.86 Aligned_cols=244 Identities=19% Similarity=0.283 Sum_probs=194.7
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +++.||+|++..... ......+..|..++..+ +||||+++++++. ..+..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~--~~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ--TPDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE--cCCEEEEEEcCC
Confidence 36999999999999976 689999999875421 23445678888888877 6999999999884 357899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~~-----ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 79 NGGDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDKG-----IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN 149 (320)
T ss_pred CCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC
Confidence 9999999987643 3889999999999999999999987 999999999999999999999999998754222
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..++.....+
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~ 222 (320)
T cd05590 150 GK-TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDE--VVYPTWLSQD 222 (320)
T ss_pred CC-cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCC--CCCCCCCCHH
Confidence 11 12234578899999999988999999999999999999999999965432211 11111111 1223334567
Q ss_pred HHHHHHHhccCCCCCCCCH------HHHHHHH
Q 005586 651 LGKMALVCTHEDPENRPTM------EAVIEEL 676 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~------~evl~~L 676 (689)
+.+++..|++.||++||++ ++++++-
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~ 254 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGSLTLGGEEAILRHP 254 (320)
T ss_pred HHHHHHHHcccCHHHCCCCCCCCCHHHHHcCC
Confidence 8999999999999999998 7777654
No 169
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.9e-37 Score=312.56 Aligned_cols=248 Identities=25% Similarity=0.466 Sum_probs=200.8
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCC
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGK 494 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gs 494 (689)
++||+|+||.||++...+++.||+|++...........|.+|++++++++|+||+++++++.. ....++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--KQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCCeEEEEEcCCCCc
Confidence 369999999999999877999999998766544455789999999999999999999999854 467899999999999
Q ss_pred HHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceee
Q 005586 495 LSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 574 (689)
Q Consensus 495 L~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 574 (689)
|.+++..... .+++..++.++.+++.||+|||+.+ ++||||||+||++++++.+||+|||+++.........
T Consensus 79 l~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~~-----i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (251)
T cd05041 79 LLTFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESKN-----CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV 150 (251)
T ss_pred HHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----EehhhcCcceEEEcCCCcEEEeeccccccccCCccee
Confidence 9999976432 4789999999999999999999987 9999999999999999999999999998664322111
Q ss_pred e-ecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHH
Q 005586 575 V-LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 652 (689)
Q Consensus 575 ~-~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 652 (689)
. .....+..|+|||.+.++.++.++|||||||++|||+| |..|+....... ..+.+........+...+.++.
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRERIESGYRMPAPQLCPEEIY 225 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHHHhcCCCCCCCccCCHHHH
Confidence 1 11223456999999988899999999999999999999 788885442211 1111222222223445567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 653 KMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 653 ~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+++.+|++.+|++||++.|+++.|+
T Consensus 226 ~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 226 RLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHhccChhhCcCHHHHHHHhh
Confidence 9999999999999999999999886
No 170
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-37 Score=321.42 Aligned_cols=251 Identities=22% Similarity=0.382 Sum_probs=203.2
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.|+..+.||+|+||.||+|... ++..||+|.+...........+.+|++++++++||||+++++++.. ....++|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK--GTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc--CCceEEEEE
Confidence 3555678999999999999875 6889999998765544555689999999999999999999998843 567999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++... .+++..+..++.|+++|++|||+.+ ++|+||+|+||++++++.+|++|||+++.+.
T Consensus 83 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~-----ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 83 YLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSER-----KIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred ccCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcCC-----eeccCCChheEEEeCCCCEEEcccccccccc
Confidence 99999999998642 4889999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.... ......++..|+|||++.+..++.++|||||||++|||+||+.|+........ ...+............+
T Consensus 153 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 226 (277)
T cd06642 153 DTQI-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLEGQYS 226 (277)
T ss_pred Ccch-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCCcccC
Confidence 4321 11123467789999999988899999999999999999999999864321111 11111222222334456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+.+++.+||+.+|++||+|.|++++.+.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLKHKFI 256 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhHHH
Confidence 778999999999999999999999987653
No 171
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.7e-38 Score=329.20 Aligned_cols=245 Identities=17% Similarity=0.275 Sum_probs=195.5
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +|+.||+|++..... ......+..|.+++..+ +||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeCC
Confidence 36999999999999876 588999999975431 23345678889988866 79999999999844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 79 NGGDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLHRHG-----VIYRDLKLDNILLDAEGHCKLADFGMCKEGILN 149 (321)
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHeEECCCCCEEEeecccceecccC
Confidence 9999999987543 3889999999999999999999987 999999999999999999999999998754322
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||+||+.||........ +..+.... ..++.....+
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----~~~i~~~~--~~~p~~~~~~ 222 (321)
T cd05591 150 GV-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----FESILHDD--VLYPVWLSKE 222 (321)
T ss_pred Cc-cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----HHHHHcCC--CCCCCCCCHH
Confidence 11 11234578899999999988999999999999999999999999965432211 11111111 1122334567
Q ss_pred HHHHHHHhccCCCCCCC-------CHHHHHHHHH
Q 005586 651 LGKMALVCTHEDPENRP-------TMEAVIEELT 677 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RP-------s~~evl~~L~ 677 (689)
+.+++..|++.||++|| ++.+++++.+
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 88999999999999999 8888887653
No 172
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3e-37 Score=320.24 Aligned_cols=262 Identities=18% Similarity=0.316 Sum_probs=207.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||.|++|.||+|... +++.+|+|.+..........++.+|++++++++||||++++++|........++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777899999999999999985 68999999998655445567899999999999999999999999766666789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.........+++.....|+.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-----i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-----IIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999988654333345889999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH-hhc---cccCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN-FID---RNLKGKF 643 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~---~~~~~~~ 643 (689)
..... ....++..|+|||.+.+..++.++||||+||++|||+||+.|+............... +.+ +.+....
T Consensus 156 ~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd06621 156 VNSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP 232 (287)
T ss_pred ccccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC
Confidence 43221 1234567899999998889999999999999999999999998644110000000111 111 1111111
Q ss_pred C--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 644 S--ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 644 ~--~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
. ...+..+.+++.+||+.+|++||++.|++++-+.
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 1 2245678999999999999999999999987654
No 173
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-37 Score=318.55 Aligned_cols=251 Identities=19% Similarity=0.318 Sum_probs=198.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++.+++||||+++++++.. .+..++|+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~--~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLS--REKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEEEE
Confidence 35777899999999999999974 78999999987543 2344578899999999999999999999854 46889999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.++++... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.+
T Consensus 86 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 156 (267)
T cd06646 86 EYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSKG-----KMHRDIKGANILLTDNGDVKLADFGVAAKI 156 (267)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEECCCCCEEECcCccceee
Confidence 9999999999997543 4889999999999999999999887 999999999999999999999999999866
Q ss_pred cCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC---
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--- 641 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 641 (689)
..... ......++..|+|||.+. ...++.++|||||||++|||++|+.|+......... ..........
T Consensus 157 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~ 231 (267)
T cd06646 157 TATIA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL----FLMSKSNFQPPKL 231 (267)
T ss_pred ccccc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh----eeeecCCCCCCCC
Confidence 43211 112234677899999874 345788999999999999999999998533211100 0000111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
......+..+.+++.+||+.+|++||++++++++|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11123456889999999999999999999999875
No 174
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-37 Score=328.59 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=196.2
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCC-cceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHE-NIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~-niv~l~g~~~~~~~~~~~l 485 (689)
+|...+.||+|+||.||+|+.+ +++.||+|++.... .......+..|++++..++|+ +|+++++++.. .+..++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 4677899999999999999876 57899999997542 123456788899999999765 57788877743 468999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLHSKG-----IIYRDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred EEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHeEEcCCCCEEEeecCcce
Confidence 999999999999997543 3889999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
....... ......++..|+|||++.+..++.++|||||||++|||+||+.||........ ...+... ...++.
T Consensus 150 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~~--~~~~~~ 222 (324)
T cd05587 150 ENIFGGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL----FQSIMEH--NVSYPK 222 (324)
T ss_pred ecCCCCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHcC--CCCCCC
Confidence 5321111 12234578899999999999999999999999999999999999964322111 1111111 122334
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH-----HHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTM-----EAVIEE 675 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~-----~evl~~ 675 (689)
....++.+++.+|++.||++||+. .++.++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 223 SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 455678899999999999999976 666655
No 175
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.6e-37 Score=320.12 Aligned_cols=257 Identities=19% Similarity=0.331 Sum_probs=204.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||++... +|+.||+|++...........|.+|++++..++||||+++++++.. ....++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN--ENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec--CCEEEEEE
Confidence 35666789999999999999875 6899999998765544556789999999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++.... .+++.....++.+++.||.|||+.. .++||||||+||++++++.++|+|||++...
T Consensus 83 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~----~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 83 EFMDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNVH----RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred ecCCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHhc----CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 9999999999987643 4899999999999999999999732 2999999999999999999999999998755
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH---h----hhhhhHhhccccC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA---E----SATFENFIDRNLK 640 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~---~----~~~~~~~~~~~~~ 640 (689)
.... .....++..|+|||++.+..++.++|||||||++|||+||+.||........ . .......+....
T Consensus 155 ~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (284)
T cd06620 155 INSI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP- 230 (284)
T ss_pred hhhc---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-
Confidence 3321 1123577889999999888899999999999999999999999965322100 0 011112221111
Q ss_pred CCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 641 GKFS-ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 641 ~~~~-~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+ ...+.++.+++.+|++.||++||++.|++++....
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1122 22456789999999999999999999999986443
No 176
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.3e-38 Score=330.35 Aligned_cols=250 Identities=16% Similarity=0.262 Sum_probs=196.2
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +++.||+|+++.... ......+..|..++.++ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEEEEeCC
Confidence 36999999999999976 689999999986432 23345688899999998 79999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 79 SGGDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHERG-----IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHeEECCCCCEEECcCccccccccC
Confidence 9999999886543 4899999999999999999999987 999999999999999999999999998753221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHH-----HhhhhhhHhhccccCCCCCH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA-----AESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 645 (689)
.. ......+|..|+|||++.+..++.++|||||||++|||+||+.||....... ........+.... ...+.
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~ 226 (329)
T cd05588 150 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--IRIPR 226 (329)
T ss_pred CC-ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--CCCCC
Confidence 11 1223457889999999999999999999999999999999999995321100 0000111111111 12344
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC------HHHHHHHHHh
Q 005586 646 SEAAKLGKMALVCTHEDPENRPT------MEAVIEELTV 678 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs------~~evl~~L~~ 678 (689)
..+.++.+++..|++.||++||+ +.|++++-+.
T Consensus 227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~ 265 (329)
T cd05588 227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265 (329)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence 45667899999999999999987 7888876443
No 177
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.3e-37 Score=321.27 Aligned_cols=254 Identities=16% Similarity=0.307 Sum_probs=203.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.+|+..+.||+|+||.||+|... ++..||+|.+..... .....+.+|+.+++.++|+||+++++++.. ....++||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEEee
Confidence 46777889999999999999864 689999999876543 334678899999999999999999998854 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 97 e~~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~g-----i~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 97 EYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ-----VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred cccCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 999999999998643 3789999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||.+.+..++.++|||||||++|||++|+.||......... .............+...
T Consensus 167 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (296)
T cd06654 167 TPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL---YLIATNGTPELQNPEKL 242 (296)
T ss_pred ccccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH---HHHhcCCCCCCCCcccc
Confidence 43221 112234677899999998888999999999999999999999999654221111 11111111111223345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+++.+|+..+|++||++.|++++-+..
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~ 274 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhChhhh
Confidence 56789999999999999999999999875443
No 178
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-37 Score=321.92 Aligned_cols=268 Identities=15% Similarity=0.306 Sum_probs=207.6
Q ss_pred cCHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEE
Q 005586 399 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCC 476 (689)
Q Consensus 399 ~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~ 476 (689)
+.++.+..++++|+..+.||+|+||.||+|... +++.+|+|++.... ....++.+|+.++.++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 445666778889999999999999999999875 68899999876432 2345788899999999 6999999999885
Q ss_pred cC---CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC
Q 005586 477 SR---GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 553 (689)
Q Consensus 477 ~~---~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~ 553 (689)
.. ..+..++||||+++|+|.++++........+++..+..++.|++.||.|||+.+ |+||||||+||+++++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~nili~~~ 160 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-----TIHRDVKGNNILLTTE 160 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-----ccccCCCHHhEEECCC
Confidence 32 335689999999999999998754333345889999999999999999999887 9999999999999999
Q ss_pred CCeEEecccccccccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh
Q 005586 554 FNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 628 (689)
Q Consensus 554 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~ 628 (689)
+.+||+|||+++.+..... ......++..|+|||++.. ..++.++|||||||++|||++|+.|+..........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred CCEEEccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999999999886643321 1223457788999998753 457889999999999999999999986432211100
Q ss_pred hhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 629 ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
......... ...+.....++.+++.+|++.||++||++.|+++++.
T Consensus 240 -~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 240 -KIPRNPPPT--LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred -hccccCCCc--ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 000000000 0112223457899999999999999999999998764
No 179
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.8e-37 Score=327.51 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=197.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 485 (689)
+|...+.||+|+||.||+|+.+ +++.||+|++..... ......+..|..++..+ +|++|+++++++.. .+..++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 4677899999999999999876 578999999976432 22334577788888877 58999999988743 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSKG-----IIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EEcCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEecCCCHHHeEECCCCcEEEccCCCce
Confidence 999999999999987643 3889999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
....... ......|++.|+|||++.+..++.++|||||||++|||+||+.||....... ....+.... ..++.
T Consensus 150 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~----~~~~i~~~~--~~~p~ 222 (323)
T cd05616 150 ENMWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQSIMEHN--VAYPK 222 (323)
T ss_pred ecCCCCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC--CCCCC
Confidence 5432211 1223457889999999999999999999999999999999999996542211 112222211 22344
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH-----HHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTM-----EAVIEE 675 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~-----~evl~~ 675 (689)
..+.++.+++.+|++.||++|++. .++.++
T Consensus 223 ~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 223 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 556788999999999999999984 666544
No 180
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.9e-37 Score=314.65 Aligned_cols=260 Identities=20% Similarity=0.371 Sum_probs=209.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||.|+||.||++... +|..||+|++..... ....+++..|++++++++|+||+++++++........+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 3667789999999999999865 688999999875432 33456789999999999999999999988766566789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.........+++..++.++.|++.||+|||..+.....++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999999976543345699999999999999999999932111233999999999999999999999999999877
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+...... .+.+.+........+...
T Consensus 161 ~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 234 (265)
T cd08217 161 GHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKIKEGKFRRIPYRY 234 (265)
T ss_pred cCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHHhcCCCCCCcccc
Confidence 544321 12235678899999999888999999999999999999999998654211 112222222223345566
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+.++.+++.+|++.+|++||++.+|+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 7789999999999999999999999986
No 181
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.5e-37 Score=326.69 Aligned_cols=243 Identities=19% Similarity=0.299 Sum_probs=191.8
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.. +++.||+|+++.... ......+..|..++... +||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEEEEeCC
Confidence 36999999999999976 578999999976421 23345567788888764 89999999999854 47899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+++.+...++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~~~-----ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 79 NGGDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHSKG-----IVYRDLKLDNILLDTDGHIKIADFGMCKENMLG 149 (316)
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEeCCCCHHHEEECCCCCEEEccCCcceECCCC
Confidence 9999999997542 3889999999999999999999987 999999999999999999999999998753221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......+|..|+|||++.+..++.++|||||||++|||++|+.||........ +..+ .. ....++.....+
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~i-~~-~~~~~~~~~~~~ 222 (316)
T cd05619 150 DA-KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL----FQSI-RM-DNPCYPRWLTRE 222 (316)
T ss_pred CC-ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH----HHHH-Hh-CCCCCCccCCHH
Confidence 11 12234578899999999988999999999999999999999999965322111 1111 10 111233334567
Q ss_pred HHHHHHHhccCCCCCCCCHH-HHHHH
Q 005586 651 LGKMALVCTHEDPENRPTME-AVIEE 675 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~-evl~~ 675 (689)
+.+++.+|++.||++||++. ++.++
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHcC
Confidence 88999999999999999997 66554
No 182
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-37 Score=334.72 Aligned_cols=261 Identities=13% Similarity=0.242 Sum_probs=204.2
Q ss_pred HHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcC
Q 005586 402 EEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR 478 (689)
Q Consensus 402 ~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 478 (689)
.++....++|...+.||+|+||.||+++.+ +++.||+|++..... ......+.+|+.+++.++||||+++++.+..
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~- 114 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 114 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-
Confidence 344556688999999999999999999986 688999999864321 2234568899999999999999999998843
Q ss_pred CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEE
Q 005586 479 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 558 (689)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl 558 (689)
....++||||+++|+|.+++... .++...+..++.|++.||+|||+.+ |+||||||+|||+++++.+||
T Consensus 115 -~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 115 -DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMG-----FIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEeCCCCHHHEEECCCCCEEE
Confidence 57899999999999999998653 2778888899999999999999988 999999999999999999999
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCccccccC----CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG----RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 634 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 634 (689)
+|||+++.+............||+.|+|||++... .++.++|||||||++|||++|+.||....... .+..+
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~~~~i 259 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKI 259 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH----HHHHH
Confidence 99999987654332223345688999999998653 37899999999999999999999997543221 12222
Q ss_pred hccccCCCCC--HHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHh
Q 005586 635 IDRNLKGKFS--ESEAAKLGKMALVCTHEDPEN--RPTMEAVIEELTV 678 (689)
Q Consensus 635 ~~~~~~~~~~--~~~~~~l~~l~~~Cl~~dp~~--RPs~~evl~~L~~ 678 (689)
....-...++ ...+..+.+++..|+..++.+ ||++.|++++.+.
T Consensus 260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 260 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred HcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 2211111111 234667889999999844443 7899999987643
No 183
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.2e-37 Score=313.04 Aligned_cols=251 Identities=29% Similarity=0.531 Sum_probs=204.8
Q ss_pred cccccCCcceEEEEEecC----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|.... +..|++|.+.........+++.+|++.+.+++|+||+++++++.. ....++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEec
Confidence 469999999999999763 889999999876544446789999999999999999999999854 57899999999
Q ss_pred CCCCHHHHhhhcCCC-----CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 491 PKGKLSKYLDQEEGS-----SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
++++|.+++...... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||.++
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-----i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-----FVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-----cccCccCcceEEECCCCcEEEccccccc
Confidence 999999999875211 245899999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCce-eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 566 LLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 566 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
....... .......++..|+|||.+....++.++||||+||++|||++ |+.|+....... +.+.+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~ 228 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-----VLEYLRKGYRLPK 228 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCC
Confidence 7754321 12223446778999999988889999999999999999999 588886542111 1111111222233
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+...+.++.+++.+|++.+|++||++.|++++|+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 229 PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 4455778999999999999999999999999874
No 184
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=314.33 Aligned_cols=263 Identities=24% Similarity=0.393 Sum_probs=202.7
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhc--cCCCcceeEeeEEEcC--CCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS--LRHENIIRLRGFCCSR--GRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~--~~~~~~ 484 (689)
.+....+.||+|.||.||+|.++ |..||||++... +++.+.+|.++.+. ++|+||+.+++.=... .-.+++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45666789999999999999998 889999999754 45567777777765 4999999988743211 124689
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCC---CCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE---VNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~---~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
||++|-++|||.+||... .++-...+++|..+|.||++||..- .++|.|+|||||+.|||+.+++.+.|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 999999999999999764 4888999999999999999999421 25899999999999999999999999999
Q ss_pred cccccccCCc---eeeeecCCCCCCCCCccccccC----CC--CCcccchhHHHHHHHHHhC----------CCCcchhH
Q 005586 562 GLHKLLADDI---VFSVLKTSAAMGYLAPEYVTTG----RF--TERSDIFAFGVIILQILTG----------SLVLTSSM 622 (689)
Q Consensus 562 Gla~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~----~~--~~ksDV~sfGvvl~elltG----------~~p~~~~~ 622 (689)
|||.....+. ........||.+|||||++... .+ -..+||||||.|+||+... +.||++..
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 9998765442 2234456799999999998643 12 2468999999999999863 45666544
Q ss_pred HHHHhhhhhhHh-hccccCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 623 RLAAESATFENF-IDRNLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 623 ~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
......+++.++ -.+.+++.+ ..+++..+.++|..||..+|..|-|+--+-+.|.....
T Consensus 441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 332222222222 122333333 35678899999999999999999999999888877653
No 185
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.2e-37 Score=316.51 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=202.2
Q ss_pred HHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 404 VESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 404 l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++.+++.+.....||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++|+||+++++++.. .+.
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 79 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGF 79 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCE
Confidence 3456667777789999999999999865 67889999987654 3445689999999999999999999999854 478
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADC 561 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~Df 561 (689)
.++|+||+++++|.++++..... ...++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-----i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHDNQ-----IVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHHCC-----EeecCCCHHHEEEcCCCCeEEEecc
Confidence 99999999999999999864321 11278888999999999999999887 999999999999986 679999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccCC--CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|++........ ......++..|+|||++.+.. ++.++|||||||++|||++|+.|+......... .. .......
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~--~~-~~~~~~~ 229 (268)
T cd06624 154 GTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA--MF-KVGMFKI 229 (268)
T ss_pred hhheecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh--Hh-hhhhhcc
Confidence 99876543221 112234678899999986543 789999999999999999999998543211100 00 0000011
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
...++.....++.+++.+||+.+|++||++.|++++-
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 266 (268)
T cd06624 230 HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP 266 (268)
T ss_pred CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence 2234445567789999999999999999999999863
No 186
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.7e-37 Score=313.86 Aligned_cols=253 Identities=20% Similarity=0.332 Sum_probs=199.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC----chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC----KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|... +|..||+|++..... ......+.+|+.++++++||||+++++++........+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 5777899999999999999875 689999999864421 12345788999999999999999999988655456788
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+++||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 83 l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~-----i~H~~l~p~nil~~~~~~~~l~dfg~~ 153 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSNM-----IVHRDIKGANILRDSAGNVKLGDFGAS 153 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHEEECCCCCEEEccCCCc
Confidence 9999999999999997543 3789999999999999999999877 999999999999999999999999999
Q ss_pred ccccCCce--eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 565 KLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 565 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
+.+..... .......++.+|+|||++.+..++.++|||||||++|||+||+.||....... .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~ 229 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIATQPTNPQ 229 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHhcCCCCCC
Confidence 86543111 11122346778999999998889999999999999999999999996432211 1111111111223
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++......+..++ .||..+|++||+|+||+++-
T Consensus 230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp 262 (266)
T cd06651 230 LPSHISEHARDFL-GCIFVEARHRPSAEELLRHP 262 (266)
T ss_pred CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence 3444445566665 68889999999999998763
No 187
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-37 Score=336.34 Aligned_cols=254 Identities=18% Similarity=0.236 Sum_probs=197.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||++... +|+.||||++..... ......+.+|++++.+++|||||++++++. +....++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--~~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--DAQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE--cCCeeEE
Confidence 36788899999999999999875 789999999865421 233467889999999999999999999984 4578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 79 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~g-----ivHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 79 IMEFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHKLG-----FIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999997543 4888899999999999999999988 9999999999999999999999999996
Q ss_pred cccCCcee----------------------------------------------eeecCCCCCCCCCccccccCCCCCcc
Q 005586 566 LLADDIVF----------------------------------------------SVLKTSAAMGYLAPEYVTTGRFTERS 599 (689)
Q Consensus 566 ~~~~~~~~----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ks 599 (689)
.+...... ......||.+|+|||++.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 229 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQEC 229 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCce
Confidence 43210000 00013478899999999988999999
Q ss_pred cchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC--HHHHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q 005586 600 DIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS--ESEAAKLGKMALVCTHEDPENR---PTMEAVIE 674 (689)
Q Consensus 600 DV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~Cl~~dp~~R---Ps~~evl~ 674 (689)
|||||||++|||+||+.||........ +..+........++ .....++.+++..|+. +|.+| +++.|+++
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHET----YRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHH----HHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 999999999999999999964322111 11111100001111 1234578889999997 66665 69999998
Q ss_pred HHHh
Q 005586 675 ELTV 678 (689)
Q Consensus 675 ~L~~ 678 (689)
+.+.
T Consensus 305 hp~~ 308 (377)
T cd05629 305 HPFF 308 (377)
T ss_pred CCCc
Confidence 8643
No 188
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=295.49 Aligned_cols=265 Identities=22% Similarity=0.345 Sum_probs=210.1
Q ss_pred hccCCcccccccCCcceEEEEE-ecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcC---CCCeE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR---GRGEC 483 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~---~~~~~ 483 (689)
.++|.+.+.+|+|||.-||.++ +.++..+|+|++.-.. ..+.+..++|++.-++++|||++++++++..+ ...+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 4678889999999999999998 5689999999998765 45667889999999999999999999887533 23568
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
|+++.|...|+|.+.+.........+++.+.+.|..||.+||.+||+.. ||++||||||.|||+.+++.+++.|||.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~---~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE---PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC---CcccccCCCcceeEecCCCceEEEeccC
Confidence 9999999999999999876655667999999999999999999999875 7899999999999999999999999999
Q ss_pred cccccCCcee--------eeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh
Q 005586 564 HKLLADDIVF--------SVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE 632 (689)
Q Consensus 564 a~~~~~~~~~--------~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~ 632 (689)
+....-.... .......|+-|+|||.+. +...++++|||||||+||+|+.|..||+..... ...+.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---GgSla 252 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---GGSLA 252 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc---CCeEE
Confidence 8765421110 111234577899999875 345689999999999999999999999643221 11110
Q ss_pred -HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 633 -NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 633 -~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+....+.-......++.+.+++.+|++.||.+||+..+++..++..
T Consensus 253 LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 01111111111122577899999999999999999999999988754
No 189
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.7e-37 Score=317.29 Aligned_cols=258 Identities=24% Similarity=0.457 Sum_probs=203.9
Q ss_pred ccCCcccccccCCcceEEEEEec------CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
++|+..+.||+|+||.||+|+.+ +...|++|.+..........+|.+|++++++++|+||+++++++.+ ...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE--AEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC--CCc
Confidence 46778899999999999999864 3467999988765433345789999999999999999999999843 467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC-----CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeE
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS-----SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 557 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~k 557 (689)
.++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-----i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-----FVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-----cccCcCccceEEEeCCCcEE
Confidence 89999999999999999765421 125899999999999999999999987 99999999999999999999
Q ss_pred EecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhc
Q 005586 558 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 558 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 636 (689)
++|||+++..............++..|+|||.+.+..++.++||||||+++|||++ |..||....... .......
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~----~~~~~~~ 233 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE----VLNRLQA 233 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH----HHHHHHc
Confidence 99999987554332222223345667999999988888999999999999999999 777885432111 1111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 637 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 637 ~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.......+...+..+.+++.+|++.+|++||++.|++++|+
T Consensus 234 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11112223344568999999999999999999999999885
No 190
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.6e-37 Score=326.54 Aligned_cols=244 Identities=19% Similarity=0.272 Sum_probs=192.4
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +|..||+|.++.... ......+..|..++... +||||+++++++.. .+..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEEEECCC
Confidence 46999999999999986 689999999975421 23345667788887754 89999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++.....++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 79 NGGDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHSKG-----IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG 149 (316)
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHeEECCCCCEEeCccCCCeecccC
Confidence 9999999987643 3889999999999999999999987 999999999999999999999999998753221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++.....+
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~ 222 (316)
T cd05620 150 DN-RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL----FESIRVD--TPHYPRWITKE 222 (316)
T ss_pred CC-ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHH
Confidence 11 12234578899999999999999999999999999999999999965422111 1111111 11233334567
Q ss_pred HHHHHHHhccCCCCCCCCHH-HHHHHH
Q 005586 651 LGKMALVCTHEDPENRPTME-AVIEEL 676 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~-evl~~L 676 (689)
+.+++..|++.||++||++. ++.++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 88999999999999999984 666443
No 191
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.6e-37 Score=327.09 Aligned_cols=244 Identities=19% Similarity=0.305 Sum_probs=195.5
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|..+ +++.||+|++..... ......+..|++++..+ +||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36999999999999986 588999999975431 23345677888898888 79999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~-----ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 79 NGGDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHERG-----IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG 149 (318)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEccCCCHHHeEECCCCcEEecccCCCeecCcC
Confidence 9999999987643 4899999999999999999999987 999999999999999999999999998753221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... ..++...+..
T Consensus 150 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~ 222 (318)
T cd05570 150 GV-TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL----FQSILEDE--VRYPRWLSKE 222 (318)
T ss_pred CC-cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH----HHHHHcCC--CCCCCcCCHH
Confidence 11 11223477889999999999999999999999999999999999964322111 11111111 1233445667
Q ss_pred HHHHHHHhccCCCCCCCCH-----HHHHHHH
Q 005586 651 LGKMALVCTHEDPENRPTM-----EAVIEEL 676 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~-----~evl~~L 676 (689)
+.+++.+||+.||++||++ .+++++-
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 8999999999999999999 8888763
No 192
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=331.88 Aligned_cols=242 Identities=19% Similarity=0.328 Sum_probs=200.0
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~ 483 (689)
-++|...++||+|.||+|+++.++ +++.+|||.+++... ..+....+.|.+++.-. +||.++.++..+ ...+++
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f--QT~~~l 444 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF--QTKEHL 444 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc--ccCCeE
Confidence 357888999999999999999987 688999999998763 34456677787777766 599999999877 556899
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
+.||||+.+|++..+.+. ..+++.....+|..|+.||.|||+++ ||+||||-+|||||.+|.+||+|||+
T Consensus 445 ~fvmey~~Ggdm~~~~~~-----~~F~e~rarfyaAev~l~L~fLH~~~-----IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT-----DVFSEPRARFYAAEVVLGLQFLHENG-----IIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred EEEEEecCCCcEEEEEec-----ccccHHHHHHHHHHHHHHHHHHHhcC-----ceeeecchhheEEcccCcEEeccccc
Confidence 999999999995544432 24899999999999999999999998 99999999999999999999999999
Q ss_pred ccccc-CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 564 HKLLA-DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 564 a~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
++..- .+. .+...-||+.|||||++.+..|+..+|+|||||+||||+.|..||.+.... ..+..++... ..
T Consensus 515 cKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe----e~FdsI~~d~--~~ 586 (694)
T KOG0694|consen 515 CKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE----EVFDSIVNDE--VR 586 (694)
T ss_pred ccccCCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHhcCC--CC
Confidence 98543 222 233456899999999999999999999999999999999999999754322 2233333222 24
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTM 669 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~ 669 (689)
||...+.+...|+.+.+.++|++|.-+
T Consensus 587 yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCcccHHHHHHHHHHhccCcccccCC
Confidence 677778899999999999999999876
No 193
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.1e-38 Score=330.93 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=195.3
Q ss_pred cccccCCcceEEEEEe----cCCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 415 NLLGKGNFSSVYKGTL----RDGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
+.||+|+||.||+++. .+|+.||+|++...... .....+..|++++++++||||+++++++.. .+..++||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEcC
Confidence 5799999999999975 36899999999764322 234567889999999999999999998844 5789999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 80 LRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSLG-----IIYRDLKPENILLDEEGHIKLTDFGLSKESID 150 (318)
T ss_pred CCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence 99999999997543 4899999999999999999999987 99999999999999999999999999986543
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
... ......++..|+|||.+.+..++.++|||||||++|||+||+.||........ ...+.... ..++.....
T Consensus 151 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~----~~~i~~~~--~~~p~~~~~ 223 (318)
T cd05582 151 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET----MTMILKAK--LGMPQFLSP 223 (318)
T ss_pred CCC-ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH----HHHHHcCC--CCCCCCCCH
Confidence 311 12234578899999999888899999999999999999999999965322111 11121111 123444566
Q ss_pred HHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 005586 650 KLGKMALVCTHEDPENRPT-----MEAVIEE 675 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs-----~~evl~~ 675 (689)
.+.+++..|++.||++||+ +.+++++
T Consensus 224 ~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 224 EAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred HHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 7889999999999999999 5556654
No 194
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.3e-37 Score=351.89 Aligned_cols=263 Identities=20% Similarity=0.251 Sum_probs=202.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+|... +|+.||+|++..... ....++|.+|++++++++||||+++++++.. .+..++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEEEE
Confidence 46888899999999999999975 689999999975432 2334679999999999999999999999854 578999
Q ss_pred EEEcCCCCCHHHHhhhcCC-------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEE
Q 005586 486 IYDFAPKGKLSKYLDQEEG-------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 558 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~-------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl 558 (689)
||||+++|+|.+++..... ....+++..++.|+.||++||+|||+.+ |+||||||+||+++.++.+||
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-----IIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-----VLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCchheEEEcCCCCEEE
Confidence 9999999999999874211 1234678888999999999999999987 999999999999999999999
Q ss_pred ecccccccccCCc-----------------eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchh
Q 005586 559 ADCGLHKLLADDI-----------------VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 621 (689)
Q Consensus 559 ~DfGla~~~~~~~-----------------~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~ 621 (689)
+|||+++...... ........||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 9999998662110 00011235788999999999999999999999999999999999999642
Q ss_pred HHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHhhCC
Q 005586 622 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRP-TMEAVIEELTVAAP 681 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-s~~evl~~L~~~~p 681 (689)
........ ....++.-. ......+..+.+++.+|++.||++|| +++++++.|+....
T Consensus 235 ~~~ki~~~--~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 235 KGRKISYR--DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred chhhhhhh--hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 21110000 001111000 00123345688999999999999995 67777777766533
No 195
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=342.31 Aligned_cols=260 Identities=20% Similarity=0.309 Sum_probs=208.8
Q ss_pred ccCCcccccccCCcceEEEEEecCC-cEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEee-EEEc---CC-CC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDG-TLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRG-FCCS---RG-RG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g-~~~~---~~-~~ 481 (689)
.+.++.++|.+|||+.||.|....+ ..||+|++-.. .+...+...+||++|++|+ |+|||.+++ .... .. ..
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 3455678999999999999998765 99999999877 3566778999999999997 999999998 3221 12 35
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
+++|.||||++|.|-+++...... .|++.++++|+.++++|+++||.. .|||||||||-+||||+.++..|||||
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~---~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL---KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC---CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 789999999999999999865543 399999999999999999999974 699999999999999999999999999
Q ss_pred cccccccCCc--------eeeeecCCCCCCCCCcccc---ccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh
Q 005586 562 GLHKLLADDI--------VFSVLKTSAAMGYLAPEYV---TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT 630 (689)
Q Consensus 562 Gla~~~~~~~--------~~~~~~~~~~~~y~aPE~~---~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~ 630 (689)
|-+.-.-... .........|+.|+|||.+ .+...++|+|||++||+||-|+....||+.....+.
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI---- 266 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI---- 266 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE----
Confidence 9875321110 0111223467889999986 356789999999999999999999999976533222
Q ss_pred hhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 631 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
++....-.-.+.....+..|+..||+.+|.+||++-||++.+.+++-.
T Consensus 267 ----lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 267 ----LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 222222122256788999999999999999999999999998777543
No 196
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.3e-37 Score=330.43 Aligned_cols=257 Identities=19% Similarity=0.325 Sum_probs=198.4
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC----C
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----G 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----~ 481 (689)
.++|...+.||+|+||.||++... +|..||+|++..... ......+.+|+.++..++||||+++++++..... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 467888999999999999999875 689999999975432 3345678899999999999999999998854321 3
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++ +|.+.++. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~-----ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEECCCCCEEEecC
Confidence 57999999965 67666643 2788889999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh------------
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA------------ 629 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~------------ 629 (689)
|+++...... ......+|..|+|||.+.+..++.++|||||||++|||+||+.||...........
T Consensus 168 g~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 168 GLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CCccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 9998654322 12234567889999999999999999999999999999999999964321111100
Q ss_pred ------hhhHhhccc--cCC----------------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 630 ------TFENFIDRN--LKG----------------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 630 ------~~~~~~~~~--~~~----------------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
......... ..+ ........++.+++.+|++.||++|||+.|++++.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 000111000 000 0011124568899999999999999999999998764
No 197
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=330.49 Aligned_cols=256 Identities=26% Similarity=0.441 Sum_probs=210.5
Q ss_pred ccccccCCcceEEEEEec--CC--cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 414 VNLLGKGNFSSVYKGTLR--DG--TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
.++||+|.||.|++|.|. +| ..||||.++.........+|++|+.+|-+++|||+++|||+..+ ....+|+|.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~---qp~mMV~EL 191 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD---QPAMMVFEL 191 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc---chhhHHhhh
Confidence 478999999999999986 34 45899999987755577899999999999999999999999854 567899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
.+.|+|.+.|++. ....|-......+|.|||.||.||.+++ +|||||.++|+||-....+||+||||.|-+..
T Consensus 192 aplGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLeskr-----lvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 192 APLGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLESKR-----LVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred cccchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHhhhh-----hhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999982 2335777888899999999999999887 89999999999999999999999999998865
Q ss_pred Cceeeeec--CCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 570 DIVFSVLK--TSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 570 ~~~~~~~~--~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
+..+..+. ..-.+.|.|||.+...+++.+||||+|||.+|||+| |..|+.+.. ...+.+.+|..-+...++.
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~-----g~qIL~~iD~~erLpRPk~ 339 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR-----GIQILKNIDAGERLPRPKY 339 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC-----HHHHHHhccccccCCCCCC
Confidence 44322222 223457999999999999999999999999999998 556664321 1123344555545566788
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHhhCCccc
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEE--LTVAAPVMA 684 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~--L~~~~p~~~ 684 (689)
+++++++++..||...|++||++..+.++ +.++.|..+
T Consensus 340 csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a 379 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVA 379 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCcee
Confidence 99999999999999999999999999844 456666543
No 198
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=308.85 Aligned_cols=259 Identities=22% Similarity=0.368 Sum_probs=200.3
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCc-ceeEeeEEEcCC----CCe
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHEN-IIRLRGFCCSRG----RGE 482 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~n-iv~l~g~~~~~~----~~~ 482 (689)
.|...++||+|+||+||+|+.+ +|+.||+|+++.... +.......+|+.++.+++|+| ||+|++++.... ...
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3455678999999999999865 799999999987754 223356689999999999999 999999997643 136
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.++|+||++ -+|..++.......+.++......++.|+++||+|||+++ |+||||||.|||++++|.+||+|||
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-----IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-----ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-----eecccCCcceEEECCCCcEeeeccc
Confidence 889999995 5999999876532234777889999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc----
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR---- 637 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~---- 637 (689)
+|+...-... .......|..|+|||++.+. .|+...||||+||++.||++++.-|............+.-+-.+
T Consensus 166 lAra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 166 LARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred hHHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9996542211 23345678889999999876 68999999999999999999998886543322222111110000
Q ss_pred --------ccCCCC-----C----HHH---HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 638 --------NLKGKF-----S----ESE---AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 638 --------~~~~~~-----~----~~~---~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..+..+ + ... .....+++..|++.+|.+|.|++.++.|
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000000 1 111 2478899999999999999999999987
No 199
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.3e-37 Score=313.12 Aligned_cols=251 Identities=16% Similarity=0.311 Sum_probs=203.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||+|+||.||++... ++..+|+|.++........+.+.+|+.++++++|+||+++++.+.. .+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEEe
Confidence 3667789999999999999875 6899999998765444455788899999999999999999998844 578999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.+++....+ ..+++...+.++.|++.||.|||+.+ |+|+||||+||++++++.++++|||+++.+.
T Consensus 79 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~~-----i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 79 YCDGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIHEKR-----VLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred eCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 9999999999875432 34788999999999999999999987 9999999999999999999999999998665
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
..... .....++..|+|||++.+..++.++||||||+++|||++|+.||........ ...+. .......+....
T Consensus 152 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~ 225 (255)
T cd08219 152 SPGAY-ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL----ILKVC-QGSYKPLPSHYS 225 (255)
T ss_pred ccccc-cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH----HHHHh-cCCCCCCCcccC
Confidence 43221 1223567789999999888899999999999999999999999965322111 11111 111112334455
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..+.+++.+||+.||++||++.|++..
T Consensus 226 ~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 226 YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 678999999999999999999999864
No 200
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.9e-37 Score=318.25 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=200.2
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+|++++.+++|+|++.+.+++.. .+..++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEEE
Confidence 556788999999999999875 6899999998754322 223467889999999999999999988844 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 80 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~-----iiH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 80 TIMNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHREN-----TVYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred EeccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeecCCCHHHEEECCCCCEEEecCCcceec
Confidence 99999999999875432 34899999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... .....++..|+|||++.+..++.++|||||||++|||+||+.||................... ...++...
T Consensus 153 ~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 228 (285)
T cd05632 153 PEGES--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKF 228 (285)
T ss_pred CCCCc--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccC
Confidence 43221 123457889999999988899999999999999999999999996542221111111111111 11233444
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPT-----MEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs-----~~evl~~ 675 (689)
...+.+++..|++.||++||+ +.+++.+
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 567889999999999999999 7787766
No 201
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.9e-37 Score=319.92 Aligned_cols=267 Identities=21% Similarity=0.354 Sum_probs=209.2
Q ss_pred ccCHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEE
Q 005586 398 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFC 475 (689)
Q Consensus 398 ~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~ 475 (689)
.++++++..++++|...+.||+|+||.||++... +++.+|+|++.... ....++.+|+.++.++ +|||++++++++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 4566777788999999999999999999999875 68999999986542 2345678899999999 899999999998
Q ss_pred EcCC---CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 476 CSRG---RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 476 ~~~~---~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
...+ ....++||||+++|+|.++++........++|..++.++.|++.||+|||+.+ |+||||||+||++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~dlkp~nili~~ 163 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-----IIHRDVKGNNILLTT 163 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHEEEcC
Confidence 6432 24689999999999999998754333345899999999999999999999877 999999999999999
Q ss_pred CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccC-----CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh
Q 005586 553 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-----RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE 627 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~ 627 (689)
++.+||+|||+++........ .....++..|+|||++... .++.++|||||||++|||++|+.|+........
T Consensus 164 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~- 241 (291)
T cd06639 164 EGGVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT- 241 (291)
T ss_pred CCCEEEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-
Confidence 999999999998866432211 1223467789999987543 368999999999999999999999864322111
Q ss_pred hhhhhHhhcc-ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 628 SATFENFIDR-NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 628 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+.... ......++.....+.+++.+|++.+|++||++.|++++-
T Consensus 242 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~ 288 (291)
T cd06639 242 ---LFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP 288 (291)
T ss_pred ---HHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence 1111100 001112333456799999999999999999999999873
No 202
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.2e-37 Score=316.08 Aligned_cols=253 Identities=20% Similarity=0.381 Sum_probs=205.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||.|+||.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++.+ ....++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--GSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE--CCeEEEEEE
Confidence 5777889999999999999976 6899999999765444555688999999999999999999998855 378999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.+.
T Consensus 80 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~~-----i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 149 (274)
T cd06609 80 YCGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEEG-----KIHRDIKAANILLSEEGDVKLADFGVSGQLT 149 (274)
T ss_pred eeCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEECCCCCEEEcccccceeec
Confidence 99999999999754 4899999999999999999999987 9999999999999999999999999998775
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH-H
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES-E 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 647 (689)
.... ......++..|+|||++.+..++.++|||||||++|||+||+.|+........ ...+........... .
T Consensus 150 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 223 (274)
T cd06609 150 STMS-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEGNKF 223 (274)
T ss_pred cccc-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCccccc
Confidence 4321 12233466789999999988899999999999999999999999864321111 011111111122222 4
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
...+.+++.+||..+|++||++++++++-+...
T Consensus 224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 224 SKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 567889999999999999999999998765543
No 203
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.1e-37 Score=313.30 Aligned_cols=255 Identities=22% Similarity=0.363 Sum_probs=201.2
Q ss_pred cCCcccccccCCcceEEEEEecC--CcEEEEEEecccC---------CchHHHHHHHHHHHHhc-cCCCcceeEeeEEEc
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRD--GTLVAIRSINVTS---------CKSEEAEFVKGLYLLTS-LRHENIIRLRGFCCS 477 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~---------~~~~~~~f~~e~~~l~~-l~H~niv~l~g~~~~ 477 (689)
+|+..+.||+|+||.||+|..+. ++.+|+|.+.... ......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36677899999999999999864 7889999886432 12234567889988875 799999999999854
Q ss_pred CCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCCCCe
Q 005586 478 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFNP 556 (689)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~~~~ 556 (689)
.+..++||||+++++|.+++.........+++..++.++.|++.||.|||+ .+ ++||||||+||++++++.+
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-----i~H~dl~~~nil~~~~~~~ 153 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-----IVHRDLTPNNIMLGEDDKV 153 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-----eeecCCCHHHEEECCCCcE
Confidence 578999999999999999986533333458999999999999999999996 44 9999999999999999999
Q ss_pred EEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc
Q 005586 557 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 557 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 636 (689)
||+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ...+.+
T Consensus 154 ~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~----~~~~~~ 227 (269)
T cd08528 154 TITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL----ATKIVE 227 (269)
T ss_pred EEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH----HHHHhh
Confidence 999999998765432 22234567889999999988899999999999999999999999864322111 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 637 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 637 ~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..............+.+++.+||+.||++||++.||..++.
T Consensus 228 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111111234567899999999999999999999999875
No 204
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.1e-37 Score=318.78 Aligned_cols=256 Identities=21% Similarity=0.324 Sum_probs=202.7
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|+..+.||+|+||.||++... +++.||+|.+...... .....+.+|+.++.+++|+|++++++.+.. .+..++||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--KDALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CCEEEEEE
Confidence 566789999999999999876 6899999998754322 223567889999999999999999998844 46899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...
T Consensus 80 e~~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~-----iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05630 80 TLMNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQER-----IVYRDLKPENILLDDHGHIRISDLGLAVHV 152 (285)
T ss_pred EecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC-----EEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence 99999999999865432 34899999999999999999999887 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... .....++..|+|||++.+..++.++|||||||++|||++|+.||......... .......+ .....++...
T Consensus 153 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~ 228 (285)
T cd05630 153 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVQEEYSEKF 228 (285)
T ss_pred CCCcc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhh-hhhhhcCccC
Confidence 43321 12335788999999999889999999999999999999999999653211100 01111111 1111223334
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPT-----MEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs-----~~evl~~L~~~ 679 (689)
...+.+++..|++.||++||+ +.|++++.+..
T Consensus 229 ~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 229 SPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 567899999999999999999 89999876543
No 205
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.5e-37 Score=350.77 Aligned_cols=263 Identities=16% Similarity=0.293 Sum_probs=203.8
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
.++|...+.||+|+||.||+|... ++..||+|.+..... ......|..|+.++.+++|||||++++++........++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 357888899999999999999976 578899999875532 334568999999999999999999999887666678999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCC--CCCceeecCCCCCceeecCC----------
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV--NKPAIVHRNLSVEKVLIDQQ---------- 553 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~--~~~~ivH~dlk~~NiLl~~~---------- 553 (689)
||||+++|+|.++|.........+++..++.|+.||+.||+|||+.+. ...+||||||||+||||+.+
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 999999999999997643333459999999999999999999998531 11349999999999999643
Q ss_pred -------CCeEEecccccccccCCceeeeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHH
Q 005586 554 -------FNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRL 624 (689)
Q Consensus 554 -------~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~ 624 (689)
..+||+|||+++.+..... .....+|+.|+|||++.+ ..++.++|||||||+||||+||+.||......
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~ 249 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF 249 (1021)
T ss_pred ccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH
Confidence 3489999999987654322 123457889999999854 45889999999999999999999999643221
Q ss_pred HHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 625 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
... ...+...... .....+.++.+++..||+.+|++||++.|++++-+
T Consensus 250 ~ql----i~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 250 SQL----ISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred HHH----HHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 111 1111111100 01223567899999999999999999999996543
No 206
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.4e-37 Score=334.20 Aligned_cols=251 Identities=18% Similarity=0.268 Sum_probs=192.9
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|+.. +++.||+|++..... ......+.+|++++++++|||||++++.+.. .+..++|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 5778899999999999999875 688999999975432 2334678899999999999999999999854 5789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~E~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~~-----ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 80 MDYIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKMG-----FIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 99999999999997643 3788888999999999999999987 99999999999999999999999999753
Q ss_pred ccCCce----------------------------------------------eeeecCCCCCCCCCccccccCCCCCccc
Q 005586 567 LADDIV----------------------------------------------FSVLKTSAAMGYLAPEYVTTGRFTERSD 600 (689)
Q Consensus 567 ~~~~~~----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ksD 600 (689)
+..... .......||..|+|||++.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 230 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeee
Confidence 310000 0001235788999999999989999999
Q ss_pred chhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc--cccCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 005586 601 IFAFGVIILQILTGSLVLTSSMRLAAESATFENFID--RNLKGKFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEE 675 (689)
Q Consensus 601 V~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs---~~evl~~ 675 (689)
|||+||++|||+||+.||........ ...+.. ...........+.++.+++.+++ .+|++|++ +.|++++
T Consensus 231 iwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 231 WWSVGVILYEMLVGQPPFLAQTPLET----QMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred EEechHHHHHHHhCCCCCCCCCHHHH----HHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999999999999965422211 111111 11111111122445566665554 49999987 8888876
Q ss_pred H
Q 005586 676 L 676 (689)
Q Consensus 676 L 676 (689)
-
T Consensus 306 p 306 (382)
T cd05625 306 P 306 (382)
T ss_pred C
Confidence 4
No 207
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.7e-37 Score=329.55 Aligned_cols=258 Identities=17% Similarity=0.290 Sum_probs=199.2
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----C
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----R 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~ 480 (689)
..++|...+.||+|+||.||++... .++.||||++..... ......+.+|+.+++.++||||+++++++.... .
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4468999999999999999999875 688999999875432 234467889999999999999999999875432 2
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCChHHEEECCCCCEEEee
Confidence 357999999964 67777643 2788999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT---------- 630 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~---------- 630 (689)
||+++....... .....++..|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 163 fg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 163 FGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred CcccccCCCccc--cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999986644321 22345778899999999889999999999999999999999998643211111000
Q ss_pred --------hhHhhccccC------------------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 631 --------FENFIDRNLK------------------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 631 --------~~~~~~~~~~------------------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+++.... .........++.+++.+|++.||++|||+.|++++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~ 314 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence 0011100000 00111224578899999999999999999999998544
No 208
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-36 Score=314.23 Aligned_cols=252 Identities=20% Similarity=0.371 Sum_probs=207.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.|+..+.||+|+||.||+|... ++..||+|.+...........|.+|++++++++||||+++++++.. ....++|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEEEe
Confidence 4666788999999999999975 5889999998866544556789999999999999999999999854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.+++... .+++.....++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 83 ~~~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~~-----ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 83 YLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSEK-----KIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred cCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----ccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 99999999998642 3788999999999999999999987 9999999999999999999999999997664
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.... ......++..|+|||++.+..++.++|||||||++|||+||+.|+........ ...+............+
T Consensus 153 ~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 226 (277)
T cd06640 153 DTQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFS 226 (277)
T ss_pred CCcc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhh
Confidence 4321 11223466789999999888899999999999999999999999864322111 11112222334455677
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
..+.+++..||+.+|++||++.+++++....
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKHKFIV 257 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence 8899999999999999999999999886544
No 209
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.4e-37 Score=325.49 Aligned_cols=255 Identities=18% Similarity=0.257 Sum_probs=196.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+++.+ +++.||+|++.... .....+.|.+|+.++..++|+||+++++++. ..+..++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--DENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe--cCCeEEE
Confidence 36788899999999999999976 68999999997532 1233456889999999999999999999884 3578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 79 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVLAIDSVHQLG-----YVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred EEecCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eEECCCCHHHEEECCCCCEEEEECCcee
Confidence 999999999999997533 24889999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
..............+|..|+|||++.. ..++.++|||||||++|||++|+.||........ ...+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~----~~~i~~~~~~ 226 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKEH 226 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH----HHHHHcCCCc
Confidence 664433222222457889999999863 4578899999999999999999999965322111 1111111100
Q ss_pred CCC---CHHHHHHHHHHHHHhccCCC--CCCCCHHHHHHHHH
Q 005586 641 GKF---SESEAAKLGKMALVCTHEDP--ENRPTMEAVIEELT 677 (689)
Q Consensus 641 ~~~---~~~~~~~l~~l~~~Cl~~dp--~~RPs~~evl~~L~ 677 (689)
... ....+..+.+++.+|+..++ ..||++.+++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 227 FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred ccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 111 11235567777777665433 44889999998854
No 210
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.5e-37 Score=326.32 Aligned_cols=243 Identities=21% Similarity=0.349 Sum_probs=190.4
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHH-HHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLY-LLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.+ +|+.||+|++..... .....++..|.. +++.++||||+++++++.. .+..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 36999999999999986 799999999975431 223345555554 5678999999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~g-----ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 79 NGGELFFHLQRER----SFPEPRARFYAAEIASALGYLHSLN-----IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred CCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCCCHHHeEECCCCcEEEeccCCCcccccC
Confidence 9999999997643 4889999999999999999999987 999999999999999999999999998754222
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..... ..+...+..
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~i~~~~~--~~~~~~~~~ 222 (323)
T cd05575 150 SK-TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----MYDNILNKPL--RLKPNISVS 222 (323)
T ss_pred CC-ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----HHHHHHcCCC--CCCCCCCHH
Confidence 11 1223457889999999999999999999999999999999999996532211 1112222111 122334667
Q ss_pred HHHHHHHhccCCCCCCCCHH----HHHHH
Q 005586 651 LGKMALVCTHEDPENRPTME----AVIEE 675 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~----evl~~ 675 (689)
+.+++.+|++.||++||++. |++++
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 89999999999999999874 66554
No 211
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.9e-37 Score=315.72 Aligned_cols=239 Identities=21% Similarity=0.436 Sum_probs=186.1
Q ss_pred ccccCCcceEEEEEecC-------------------------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCccee
Q 005586 416 LLGKGNFSSVYKGTLRD-------------------------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 470 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~ 470 (689)
.||+|+||.||+|.+.. ...|++|++.... .....+|.+|+.++++++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999997521 2358899886543 233467899999999999999999
Q ss_pred EeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee
Q 005586 471 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 550 (689)
Q Consensus 471 l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl 550 (689)
++++|.. ....++||||+++|+|..++....+ .+++..++.++.|+++||+|||+.+ |+||||||+|||+
T Consensus 81 ~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----iiH~dlkp~Nill 150 (274)
T cd05076 81 VHGVCVR--GSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLEDKN-----LVHGNVCAKNILL 150 (274)
T ss_pred EEEEEEe--CCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcCC-----ccCCCCCcccEEE
Confidence 9999965 4678999999999999999975432 4889999999999999999999887 9999999999999
Q ss_pred cCCC-------CeEEecccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHH-hCCCCcchh
Q 005586 551 DQQF-------NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQIL-TGSLVLTSS 621 (689)
Q Consensus 551 ~~~~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~ell-tG~~p~~~~ 621 (689)
++++ .+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+...
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 225 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER 225 (274)
T ss_pred eccCcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 8654 3799999988644321 12235677999998865 56899999999999999994 789888643
Q ss_pred HHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 622 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..... ........ ..+......+.+++.+||+.+|++||+|.+|+++|.
T Consensus 226 ~~~~~-----~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 226 TPSEK-----ERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ChHHH-----HHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 22111 11111111 122223356899999999999999999999999873
No 212
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.6e-37 Score=323.16 Aligned_cols=260 Identities=18% Similarity=0.360 Sum_probs=199.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|+.+ ++..||+|+++..........+.+|++++++++||||+++++++.. .+..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT--DKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee--CCeEEEEE
Confidence 45777899999999999999876 6889999999765544444578899999999999999999999854 46799999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~~-----ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 84 EYLDK-DLKQYMDDCG---NIMSMHNVKIFLYQILRGLAYCHRRK-----VLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred eCCCC-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEECccccceec
Confidence 99975 8888886543 24789999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh-----------hhhHh-
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA-----------TFENF- 634 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~-----------~~~~~- 634 (689)
..... ......++..|+|||.+.+ ..++.++|||||||++|||+||+.||........... .+..+
T Consensus 155 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 155 SVPTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred CCCcc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 33221 1122346778999998765 4688999999999999999999999964321111000 00000
Q ss_pred -----hccccCCC-------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 635 -----IDRNLKGK-------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 635 -----~~~~~~~~-------~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.+...... .....+.++.+++.+|++.||++|||+.|++++.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 00000000 00123457889999999999999999999999876553
No 213
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.6e-36 Score=310.41 Aligned_cols=239 Identities=20% Similarity=0.420 Sum_probs=187.0
Q ss_pred cccccCCcceEEEEEecC-------------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 415 NLLGKGNFSSVYKGTLRD-------------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
+.||+|+||.||+|.+.+ ...|++|.+.... ......|.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVR--DV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CC
Confidence 368999999999998532 2358889876543 3344578899999999999999999999854 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC------
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN------ 555 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~------ 555 (689)
..++||||+++|+|..+++... ..+++..+++|+.|+++||+|||+.+ |+||||||+|||++.++.
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLEDKD-----LVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhCC-----eECCCCCcccEEEecCCccCCCCc
Confidence 7899999999999999987543 24899999999999999999999987 999999999999987664
Q ss_pred -eEEecccccccccCCceeeeecCCCCCCCCCccccc-cCCCCCcccchhHHHHHHHHH-hCCCCcchhHHHHHhhhhhh
Q 005586 556 -PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-TGRFTERSDIFAFGVIILQIL-TGSLVLTSSMRLAAESATFE 632 (689)
Q Consensus 556 -~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~ksDV~sfGvvl~ell-tG~~p~~~~~~~~~~~~~~~ 632 (689)
+|++|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+........ .
T Consensus 150 ~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----~ 219 (262)
T cd05077 150 FIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-----E 219 (262)
T ss_pred eeEeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-----H
Confidence 899999998765322 1234667899999886 466899999999999999997 58888754321111 1
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 633 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+...... .......++.+++.+||+.||++||++.++++++
T Consensus 220 ~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11111111 1112245788999999999999999999999876
No 214
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-38 Score=329.45 Aligned_cols=247 Identities=23% Similarity=0.385 Sum_probs=201.0
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccC---CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS---CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
.+||+|+|-+||||.+. +|..||.-.++... .....+.|..|+.+|+.|+|||||+++.++.+......-+|+|.|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 57999999999999976 68888865444332 233447899999999999999999999999888777889999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecccccccccC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKLLAD 569 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~~~~~ 569 (689)
..|+|..|+...+. ++.....++++||++||.|||+.. |||||||||-.||+|+. .|.+||+|.|||..+..
T Consensus 126 TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~~---PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 126 TSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQD---PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcCC---CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999988753 788899999999999999999964 99999999999999985 68999999999998876
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
... ....||+.|||||... ..|++.+||||||++|+||+|+..||..-...+... ..++.......+..-...
T Consensus 199 s~a---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIY---KKV~SGiKP~sl~kV~dP 271 (632)
T KOG0584|consen 199 SHA---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIY---KKVTSGIKPAALSKVKDP 271 (632)
T ss_pred ccc---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHH---HHHHcCCCHHHhhccCCH
Confidence 532 2367999999999876 789999999999999999999999996543333322 222211111111111245
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 650 KLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++.+++..|+.. .++|||+.|++++-
T Consensus 272 evr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 272 EVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 789999999999 99999999999874
No 215
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5.1e-37 Score=323.86 Aligned_cols=242 Identities=19% Similarity=0.288 Sum_probs=192.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~l 485 (689)
+|...+.||+|+||.||+|..+ +|+.||+|++..... ......+..|.+++..+. |++|+++.+++.. .+..++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEE
Confidence 3667789999999999999875 689999999975421 233456888999998886 5677788887743 467999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.++..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~~-----ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLHRRG-----IIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHeEECCCCCEEEecccccc
Confidence 999999999999987643 3899999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
....... ......++..|+|||++.+..++.++|||||||++|||+||+.||....... ....+.... ..++.
T Consensus 150 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~----~~~~i~~~~--~~~p~ 222 (323)
T cd05615 150 EHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE----LFQSIMEHN--VSYPK 222 (323)
T ss_pred ccCCCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC--CCCCc
Confidence 5432211 1123347889999999998899999999999999999999999996542211 112222211 12344
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTM 669 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~ 669 (689)
..+.++.+++.+|++.+|++|++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHhhCCCC
Confidence 456678999999999999999974
No 216
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-38 Score=310.15 Aligned_cols=248 Identities=23% Similarity=0.403 Sum_probs=208.4
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchH--HHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~--~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
.+|...+.||+|.||.|-+|.. ..|+.||||.+++...+.+ .-.+.+||++|+.++||||+.++.+| ++.+...+
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--ENkdKIvi 130 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--ENKDKIVI 130 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--cCCceEEE
Confidence 4566778999999999999986 5899999999998765443 45788999999999999999999998 66788999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||..+|.|.+|+...+. |++.+...+.+||..|+.|+|.++ ++|||||-+|||||+++++||+||||+.
T Consensus 131 vMEYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHknr-----VvHRDLKLENILLD~N~NiKIADFGLSN 201 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKNR-----VVHRDLKLENILLDQNNNIKIADFGLSN 201 (668)
T ss_pred EEEecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhcc-----ceecccchhheeecCCCCeeeeccchhh
Confidence 9999999999999987653 899999999999999999999987 8999999999999999999999999999
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCC-CCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
++.++... ....|++-|.+||++.+.+| .+.+|-||+||+||-|+.|..||++.. ...++...-.+.|.
T Consensus 202 ly~~~kfL--qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--------hk~lvrQIs~GaYr 271 (668)
T KOG0611|consen 202 LYADKKFL--QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--------HKRLVRQISRGAYR 271 (668)
T ss_pred hhccccHH--HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--------HHHHHHHhhccccc
Confidence 88765432 22357788999999999988 589999999999999999999997542 22222222233332
Q ss_pred -HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 645 -ESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 645 -~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
++.+....-++.+|+..+|++|-|+.+|..+-|
T Consensus 272 EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 272 EPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred CCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 233456778999999999999999999998765
No 217
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=8.9e-37 Score=310.73 Aligned_cols=250 Identities=21% Similarity=0.402 Sum_probs=202.1
Q ss_pred ccCCcccccccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||+|..++ +..|++|.+.... ...+|.+|++++++++|+||+++++++.. ....++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFK--NTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCcEEEEE
Confidence 567888999999999999999874 8899999987543 25689999999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... ..++|.....++.|+++||.|||+.+ ++||||+|+||++++++.+||+|||++...
T Consensus 78 e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~-----i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~ 149 (256)
T cd06612 78 EYCGAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLHSNK-----KIHRDIKAGNILLNEEGQAKLADFGVSGQL 149 (256)
T ss_pred ecCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCcceEEECCCCcEEEcccccchhc
Confidence 9999999999997543 34899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||++.+..++.++|||||||++|||+||+.|+.......... .... ........+...
T Consensus 150 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~~~ 225 (256)
T cd06612 150 TDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-MIPN--KPPPTLSDPEKW 225 (256)
T ss_pred ccCcc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-hhcc--CCCCCCCchhhc
Confidence 54321 1122346778999999988899999999999999999999999986432211100 0000 000011122334
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...+.+++.+||+.+|++||++.||+++
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 5678999999999999999999999875
No 218
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9e-37 Score=310.61 Aligned_cols=247 Identities=21% Similarity=0.455 Sum_probs=200.0
Q ss_pred ccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
++|...+.||+|+||.||+|.. +++.||+|.+.... ....|.+|+.++.+++|||++++++++.. +..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILH---NGLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCcEEEEE
Confidence 3577789999999999999975 57889999986532 34578999999999999999999998853 34789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 79 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~-----~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 79 LMSKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESKK-----LVHRDLAARNILVSEDGVAKVSDFGLARVGS 151 (254)
T ss_pred CCCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccCcceEEEcCCCcEEECCCccceecc
Confidence 9999999999976532 34889999999999999999999887 9999999999999999999999999987643
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
... .....+..|+|||++.+..++.++|||||||++|||++ |+.|+....... ..+.+....+...+...
T Consensus 152 ~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 222 (254)
T cd05083 152 MGV----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECVEKGYRMEPPEGC 222 (254)
T ss_pred ccC----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhCCCCCCCCCcC
Confidence 321 12233467999999988899999999999999999998 999886432211 11122222222233445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 6788999999999999999999999998864
No 219
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.4e-37 Score=326.19 Aligned_cols=243 Identities=21% Similarity=0.339 Sum_probs=189.7
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHH-HHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLY-LLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.. +|+.||+|++..... .....++..|.. +++.++||||+++++++.. .+..++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT--AEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36999999999999985 689999999875431 223345556654 6788999999999998843 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++.....++.||++||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 79 NGGELFFHLQRER----CFLEPRARFYAAEVASAIGYLHSLN-----IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence 9999998886542 3788888899999999999999987 999999999999999999999999998754222
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.... ...+......
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~--~~~~~~~~~~ 222 (321)
T cd05603 150 EE-TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ----MYDNILHKP--LQLPGGKTVA 222 (321)
T ss_pred CC-ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH----HHHHHhcCC--CCCCCCCCHH
Confidence 11 1223457889999999998899999999999999999999999996542111 111222111 1233445667
Q ss_pred HHHHHHHhccCCCCCCCCH----HHHHHH
Q 005586 651 LGKMALVCTHEDPENRPTM----EAVIEE 675 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~----~evl~~ 675 (689)
+.+++..|++.||++||+. .|++++
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred HHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 8999999999999999875 455544
No 220
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=308.94 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=201.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEc---CCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS---RGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~---~~~~~~ 483 (689)
..|...+.||+|+||.|+.|..+ +|..||||++...- .....++-.+|+++|+.++|+||+.+.+.+.. ..-...
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 45555689999999999999975 79999999997332 24456788899999999999999999998754 223568
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
|+|+|+| .-+|...++... .|+......+..|+++||.|+|+.+ |+||||||+|+|++.+...||+|||+
T Consensus 102 YiV~elM-etDL~~iik~~~----~L~d~H~q~f~YQiLrgLKyiHSAn-----ViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQQ----DLTDDHAQYFLYQILRGLKYIHSAN-----VIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred EEehhHH-hhHHHHHHHcCc----cccHHHHHHHHHHHHHhcchhhccc-----ccccccchhheeeccCCCEEeccccc
Confidence 9999999 569999998653 3888889999999999999999988 99999999999999999999999999
Q ss_pred cccccCCcee-eeecCCCCCCCCCccccc-cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh-----------h
Q 005586 564 HKLLADDIVF-SVLKTSAAMGYLAPEYVT-TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA-----------T 630 (689)
Q Consensus 564 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~-~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~-----------~ 630 (689)
||........ ..+....|.+|.|||.+. ...||...||||.||++.||++|++-|.+.....+... .
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9988543111 123345678899999875 46799999999999999999999988865322111100 0
Q ss_pred --------hhHhhcccc-CCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 631 --------FENFIDRNL-KGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 631 --------~~~~~~~~~-~~~~-----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....+.... .... .+.......++..+++..||.+|+|++|.+++.-.
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence 111111100 0011 12346678999999999999999999999988643
No 221
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.5e-37 Score=325.43 Aligned_cols=255 Identities=18% Similarity=0.252 Sum_probs=199.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+++.+ +++.||+|.+.... .......|.+|+.++..++|+||+++++++.. .+..++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD--ENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 46788899999999999999976 68899999987532 12334568889999999999999999998843 578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 79 v~Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~~-----iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQLH-----YVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred EEeCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCchHHEEEcCCCCEEEEecccee
Confidence 9999999999999976432 4889999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
..............++.+|+|||++.+ +.++.++|||||||++|||++|+.||....... ....+.....+
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----~~~~i~~~~~~ 226 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHEER 226 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH----HHHHHHcCCCc
Confidence 765443322233458899999999865 467899999999999999999999996532211 11222221111
Q ss_pred CCCC---HHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHH
Q 005586 641 GKFS---ESEAAKLGKMALVCTHEDPEN--RPTMEAVIEELT 677 (689)
Q Consensus 641 ~~~~---~~~~~~l~~l~~~Cl~~dp~~--RPs~~evl~~L~ 677 (689)
..++ ...+.++.+++.+|+..++++ |+++++++++.+
T Consensus 227 ~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 227 FQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred ccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 1111 223567888898888866544 568999987743
No 222
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2e-37 Score=334.16 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=195.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|+.. +++.||+|++..... ......+.+|++++.+++||||+++++.+.+ .+..++|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEE
Confidence 5788899999999999999875 689999999865421 2234568899999999999999999998844 5789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++|+|.+++.... .+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 80 ~E~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~~-----ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKMG-----FIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 99999999999997643 3788888899999999999999987 99999999999999999999999999753
Q ss_pred ccCCc------------------------------------------eeeeecCCCCCCCCCccccccCCCCCcccchhH
Q 005586 567 LADDI------------------------------------------VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAF 604 (689)
Q Consensus 567 ~~~~~------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sf 604 (689)
+.... ........||..|+|||++.+..++.++|||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 230 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 230 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeec
Confidence 21000 000012357889999999999899999999999
Q ss_pred HHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc--cccCCCCCHHHHHHHHHHHHHhccCCCCCCC---CHHHHHHHHH
Q 005586 605 GVIILQILTGSLVLTSSMRLAAESATFENFID--RNLKGKFSESEAAKLGKMALVCTHEDPENRP---TMEAVIEELT 677 (689)
Q Consensus 605 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RP---s~~evl~~L~ 677 (689)
||++|||+||+.||......... ..+.. ...........+.++.+++.+|+ .+|++|+ ++.|++++.+
T Consensus 231 Gvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 231 GVILYEMLVGQPPFLADTPAETQ----LKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred cceeeehhhCCCCCCCCCHHHHH----HHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 99999999999999654322111 11111 01111111123445666777765 4999999 8999998754
No 223
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2e-36 Score=308.21 Aligned_cols=251 Identities=29% Similarity=0.536 Sum_probs=202.2
Q ss_pred CcccccccCCcceEEEEEecC-----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 412 SEVNLLGKGNFSSVYKGTLRD-----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+..+.||+|+||.||++...+ +..||+|++...........+..|++.+.+++|+||+++++++.. .+..+++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~i 79 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE--EEPLMIV 79 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC--CCeeEEE
Confidence 456789999999999999763 488999999766544466789999999999999999999999854 4689999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++++|.+++..... ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 80 ~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~-----~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESKN-----FIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred EeccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcCC-----eeecccccceEEEccCCeEEEcccCCcee
Confidence 999999999999976432 12899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
.............++..|+|||.+.+..++.++||||+|++++||++ |+.|+....... +.+.+........+.
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~ 227 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-----VLEYLKKGYRLPKPE 227 (258)
T ss_pred cccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCCCCC
Confidence 76543222222336678999999988889999999999999999998 778875421111 111111111222333
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+.++.+++.+|+..+|++||++.|+++.|
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 228 NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 4567899999999999999999999998864
No 224
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.2e-37 Score=324.06 Aligned_cols=254 Identities=18% Similarity=0.263 Sum_probs=196.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+++.+ +++.+|+|++.+... ......|.+|+.++..++|+||+++++++. ..+..++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--DENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe--cCCEEEE
Confidence 36788899999999999999986 578899999864321 223356889999999999999999999884 3578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.++++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 79 v~ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~-----iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQLH-----YVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred EEeccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHEEECCCCCEEEeecchhe
Confidence 9999999999999976432 4889999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
..............||..|+|||++. ...++.++|||||||++|||++|+.||....... .+..+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~----~~~~i~~~~~~ 226 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHKER 226 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH----HHHHHhCCCcc
Confidence 65433222223345889999999986 3468899999999999999999999996532211 11122221111
Q ss_pred CCC---CHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHH
Q 005586 641 GKF---SESEAAKLGKMALVCTHEDPEN--RPTMEAVIEEL 676 (689)
Q Consensus 641 ~~~---~~~~~~~l~~l~~~Cl~~dp~~--RPs~~evl~~L 676 (689)
..+ ....+.++.+++.+|+..++.+ ||++.|++++-
T Consensus 227 ~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 227 FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred ccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 111 1234567788888877654444 78999999884
No 225
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=346.36 Aligned_cols=257 Identities=26% Similarity=0.444 Sum_probs=215.3
Q ss_pred CcccccccCCcceEEEEEec----C----CcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCe
Q 005586 412 SEVNLLGKGNFSSVYKGTLR----D----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 482 (689)
...+.+|+|.||.|++|... . ...||||.++......+.+.+..|+++|..+ +|+||+.++|+|.. ++.
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~--~~~ 376 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ--DGP 376 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc--CCc
Confidence 34468999999999999853 1 4579999999887777788999999999999 69999999999955 678
Q ss_pred EEEEEEcCCCCCHHHHhhhcC---------C-CC--CCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee
Q 005586 483 CFLIYDFAPKGKLSKYLDQEE---------G-SS--NVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 550 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~---------~-~~--~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl 550 (689)
.++|+||++.|+|.++|+..+ . .. ..++..+.+.++.|||.||+||++.. +|||||.++|||+
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-----~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-----CVHRDLAARNVLI 451 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-----ccchhhhhhhEEe
Confidence 999999999999999998876 0 01 23889999999999999999999876 8999999999999
Q ss_pred cCCCCeEEecccccccccCCceeeeecCC--CCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHh
Q 005586 551 DQQFNPLIADCGLHKLLADDIVFSVLKTS--AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAE 627 (689)
Q Consensus 551 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~--~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~ 627 (689)
.++..+||+|||++|.......+...... -+..|||||.+....|+.|||||||||+||||+| |..|+.... .
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~----~ 527 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP----P 527 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC----c
Confidence 99999999999999977665555444333 3567999999999999999999999999999999 677775411 0
Q ss_pred hhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 628 SATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+.+....+...|..+..++.++|..||+.+|++||++.|+++.+...
T Consensus 528 ~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 528 TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1122335555666677888899999999999999999999999999988773
No 226
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.2e-37 Score=313.16 Aligned_cols=255 Identities=19% Similarity=0.375 Sum_probs=205.5
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||+|+||.||++..+ +++.||+|++..........++.+|++++++++||||+++++++.. ....++|+|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN--NGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec--CCEEEEEEE
Confidence 5667789999999999999986 6899999999876545566789999999999999999999999854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|+++++|.+++.... ..+++.....++.|++.||+|||+ .+ ++||||||+||++++++.+||+|||.+...
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~-----i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~ 151 (265)
T cd06605 80 YMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKHK-----IIHRDVKPSNILVNSRGQIKLCDFGVSGQL 151 (265)
T ss_pred ecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCCC-----eecCCCCHHHEEECCCCCEEEeecccchhh
Confidence 999999999997653 348889999999999999999998 76 999999999999999999999999998766
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh-hhhhhHhhccccCCCCCHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE-SATFENFIDRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 646 (689)
...... ...++..|+|||++.+..++.++||||||+++|||++|+.|+......... ........... ....+..
T Consensus 152 ~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 227 (265)
T cd06605 152 VNSLAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-PPRLPSG 227 (265)
T ss_pred HHHHhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-CCCCChh
Confidence 432211 145677899999999889999999999999999999999998643211000 01111111111 1122222
Q ss_pred -HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 647 -EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 647 -~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...++.+++..||..+|++||++.|++.+-+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 56779999999999999999999999987554
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-36 Score=314.07 Aligned_cols=252 Identities=18% Similarity=0.287 Sum_probs=198.8
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
|+..+.||+|+||.||+|... ++..+++|.+.... ......|.+|+++++.++|||++++++++.. ....++||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCEEEEEEEe
Confidence 445678999999999999976 57888999986543 3445679999999999999999999999854 4688999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|..++.... ..++|..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-----i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 155 (282)
T cd06643 84 CAGGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHENK-----IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 155 (282)
T ss_pred cCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCcccEEEccCCCEEEccccccccccc
Confidence 99999999887533 24899999999999999999999987 99999999999999999999999999876543
Q ss_pred CceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc-ccCCCC
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-NLKGKF 643 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 643 (689)
... ......++..|+|||++. +..++.++|||||||++|||++|+.|+........ ....... ......
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 230 (282)
T cd06643 156 TIQ-RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSEPPTLAQ 230 (282)
T ss_pred ccc-ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH----HHHHhhcCCCCCCC
Confidence 221 122345778899999974 34578899999999999999999999864322111 1111110 001112
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.....++.+++..||+.+|.+||++.+++++.+.
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 265 (282)
T cd06643 231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFV 265 (282)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCE
Confidence 23345678999999999999999999999987543
No 228
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.3e-37 Score=324.82 Aligned_cols=242 Identities=21% Similarity=0.323 Sum_probs=188.2
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHH-HHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGL-YLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~-~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.. +++.||+|++..... .....++..|. .+++.++||||+++++++.. .+..++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeCC
Confidence 36999999999999976 678899999975421 12233444444 45678999999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+.+.....++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~g-----iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 79 NGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSLN-----IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 149 (325)
T ss_pred CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCHHHeEECCCCCEEEccCCCCcccccC
Confidence 9999999997643 3777888889999999999999988 999999999999999999999999999754322
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||........ +..+..... ..+......
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~--~~~~~~~~~ 222 (325)
T cd05602 150 NG-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNKPL--QLKPNITNS 222 (325)
T ss_pred CC-CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH----HHHHHhCCc--CCCCCCCHH
Confidence 11 12234578899999999999999999999999999999999999965422211 112221111 122334567
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 005586 651 LGKMALVCTHEDPENRPTMEAVIE 674 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~evl~ 674 (689)
+.+++..|++.||.+||++.+.+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHH
Confidence 899999999999999998774433
No 229
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.7e-36 Score=309.12 Aligned_cols=254 Identities=19% Similarity=0.275 Sum_probs=201.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC----chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC----KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|+||.||+|... +|..||+|.+..... ......+.+|++++++++||||+++++++.+......
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 35777899999999999999875 589999998864321 1234578899999999999999999998755444568
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++||||+++++|.+++.... .+++...++++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~Dfg~ 152 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSNM-----IVHRDIKGANILRDSVGNVKLGDFGA 152 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEecCCCCEEECcCcc
Confidence 89999999999999987542 3788889999999999999999987 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++....... .......++..|+|||.+.+..++.++|||||||++|||++|+.|+........ ..+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~ 228 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNP 228 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----HHHHhcCCCCC
Confidence 986543211 111223467789999999888899999999999999999999999864321111 11111111223
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+......+.+++.+|+. +|++||+++||+++.
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 3455566778889999985 999999999998764
No 230
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.6e-37 Score=323.58 Aligned_cols=248 Identities=15% Similarity=0.255 Sum_probs=194.0
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|..+ +++.||+|++..... ......+.+|+.++.++ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeCC
Confidence 36999999999999975 678999999986532 23345688999999888 69999999998844 47899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~-----ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 79 NGGDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHERG-----IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHEEEeCCCCEEEeccccceeccCC
Confidence 9999999886543 4899999999999999999999987 999999999999999999999999998753221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHH---HHhhhhhhHhhccccCCCCCHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL---AAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
.. ......+|..|+|||++.+..++.++|||||||++|||+||+.||...... .........+.... ...+...
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~ 226 (327)
T cd05617 150 GD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--IRIPRFL 226 (327)
T ss_pred CC-ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--CCCCCCC
Confidence 11 122345788999999999999999999999999999999999999532110 00000111111111 1233444
Q ss_pred HHHHHHHHHHhccCCCCCCCC------HHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPT------MEAVIEEL 676 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs------~~evl~~L 676 (689)
+..+.+++.+|++.||++||+ +.+++++-
T Consensus 227 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 227 SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 567889999999999999998 56777653
No 231
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.4e-36 Score=314.26 Aligned_cols=257 Identities=18% Similarity=0.354 Sum_probs=198.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHH-HhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYL-LTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+.||+|+||.||+|..+ +|+.||+|+++.........++..|+.. ++..+||||+++++++.. .+..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~--~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR--EGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec--CCcEEEE
Confidence 36788899999999999999976 6999999999865444445566667765 566789999999999854 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|||++ |+|.+++.........+++...+.++.|++.||+|||+. + ++||||||+||++++++.+||+|||+++
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-----i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-----VIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-----eecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99996 789888876433335689999999999999999999986 5 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCcccccc----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTT----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
....... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.|+....... .......... ..
T Consensus 153 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~-~~ 226 (283)
T cd06617 153 YLVDSVA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF---QQLKQVVEEP-SP 226 (283)
T ss_pred ccccccc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH---HHHHHHHhcC-CC
Confidence 6643221 122346778999998764 456899999999999999999999986421110 1111111111 11
Q ss_pred CCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 642 KFS-ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 642 ~~~-~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
..+ ...+.++.+++..|+..+|++||++.+++++-+..
T Consensus 227 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 265 (283)
T cd06617 227 QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265 (283)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhh
Confidence 111 22456799999999999999999999999865443
No 232
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-36 Score=326.99 Aligned_cols=257 Identities=17% Similarity=0.294 Sum_probs=198.9
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----CC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 481 (689)
.++|...+.||+|+||.||+|... .++.||||++..... ......+.+|+.+++.++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467888999999999999999875 688999999975432 334567889999999999999999999874321 23
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++ +|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+||
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhCC-----eecCCCCHHHEEECCCCcEEEEeC
Confidence 57999999964 77777743 2788999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh---------
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--------- 632 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~--------- 632 (689)
|+++....... .....++..|+|||++.+..++.++|||||||++|||+||+.||............+.
T Consensus 171 G~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 171 GLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CCccccCCCCc--ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99987644321 1234578889999999999999999999999999999999999964322111111000
Q ss_pred ---------Hhhcc--ccC----------------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 633 ---------NFIDR--NLK----------------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 633 ---------~~~~~--~~~----------------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..... ... .........++.+++.+|++.||++|||+.|++++-+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 00000 000 00011124578899999999999999999999998654
No 233
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.3e-36 Score=307.99 Aligned_cols=252 Identities=21% Similarity=0.393 Sum_probs=202.5
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|++|.||++..+ +++.||+|++..... ....+.+.+|++++++++|+|++++++.+.. .....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG-EDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC-CCCEEEEEe
Confidence 3677899999999999999875 578999999975432 2345678999999999999999999987643 234678999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++..... ..+++.+++.++.+++.|++|||+.+ |+||||||+||++++++.++|+|||+++..
T Consensus 80 e~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~-----i~H~di~p~nil~~~~~~~~l~df~~~~~~ 152 (257)
T cd08223 80 GFCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLHEKH-----ILHRDLKTQNVFLTRTNIIKVGDLGIARVL 152 (257)
T ss_pred cccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCchhEEEecCCcEEEecccceEEe
Confidence 99999999999976432 35899999999999999999999987 999999999999999999999999999866
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||++.+..++.++||||||++++||++|+.|+........ ...... ......+...
T Consensus 153 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~ 226 (257)
T cd08223 153 ENQCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL----VYRIIE-GKLPPMPKDY 226 (257)
T ss_pred cccCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHh-cCCCCCcccc
Confidence 43221 11223467789999999998999999999999999999999999864321111 111111 1112234455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..++.+++.+|++.+|++||++.+++++
T Consensus 227 ~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 227 SPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 6789999999999999999999999976
No 234
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.8e-36 Score=307.22 Aligned_cols=252 Identities=20% Similarity=0.366 Sum_probs=204.9
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|+||.||.++.. ++..+++|++..... .....++.+|++++++++|+||+++++++.+ .+..++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 4777899999999999999864 689999999876542 3445678999999999999999999999955 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++|+|.+++.... ...+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~ 151 (256)
T cd08221 79 EYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAG-----ILHRDIKTLNIFLTKAGLIKLGDFGISKIL 151 (256)
T ss_pred EecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccCCChHhEEEeCCCCEEECcCcceEEc
Confidence 9999999999997653 235899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||+..+..++.++||||||+++|||++|+.|+....... ...++...... ..+...
T Consensus 152 ~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~ 225 (256)
T cd08221 152 GSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN----LVVKIVQGNYT-PVVSVY 225 (256)
T ss_pred ccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHcCCCC-CCcccc
Confidence 44332 1223456788999999988889999999999999999999999986432111 11122221111 222344
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+.++.+++..||+.+|++||++.|+++++
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 66799999999999999999999999875
No 235
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.6e-36 Score=311.97 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=197.1
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc---------hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK---------SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 480 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 480 (689)
|...+.||+|+||.||+|... +|+.||+|.++..... ...+.+.+|++++.+++|||++++++++. ..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~ 80 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--TE 80 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec--cC
Confidence 556789999999999999865 6899999988643210 11246888999999999999999999984 35
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
+..++||||+++|+|.++++... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+|++|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~~~nil~~~~~~~~l~d 151 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSKG-----ILHRDLKADNLLVDADGICKISD 151 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhCC-----eeecCCChhhEEEcCCCeEEEee
Confidence 78899999999999999997652 4899999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCcee-eeecCCCCCCCCCccccccCC--CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc
Q 005586 561 CGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 561 fGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~--~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
||+++........ ......++..|+|||.+.... ++.++||||||+++||+++|+.|+...................
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (272)
T cd06629 152 FGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP 231 (272)
T ss_pred ccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC
Confidence 9999865432111 122334677899999987654 7899999999999999999999985432211110000000011
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.............+.+++..|++.+|++||++.||+++.
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 232 PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 111112223467899999999999999999999999863
No 236
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4e-37 Score=325.09 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=188.0
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHH-HHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLY-LLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|+.. +|+.||+|++..... .....++..|.. +++.++||||+++++++.. .+..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 36999999999999875 789999999975421 223345666655 5677999999999998844 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|..++.... .+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~g-----ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 79 NGGELFFHLQRER----SFPEPRARFYAAEIASALGYLHSIN-----IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCHHHeEECCCCCEEEeecCCcccCCCC
Confidence 9999999887543 4889999999999999999999987 999999999999999999999999998754221
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||........ +..+..... .........
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~~~~~~~--~~~~~~~~~ 222 (325)
T cd05604 150 SD-TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM----YDNILHKPL--VLRPGASLT 222 (325)
T ss_pred CC-CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH----HHHHHcCCc--cCCCCCCHH
Confidence 11 12234578899999999999999999999999999999999999965422111 122222111 122234567
Q ss_pred HHHHHHHhccCCCCCCCCHHH
Q 005586 651 LGKMALVCTHEDPENRPTMEA 671 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~e 671 (689)
+.+++..|++.+|++||++++
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 889999999999999998753
No 237
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.2e-36 Score=309.85 Aligned_cols=259 Identities=24% Similarity=0.397 Sum_probs=200.7
Q ss_pred CCcccccccCCcceEEEEEec----CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC----C
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----G 481 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~----~ 481 (689)
|...+.||+|+||.||+|.++ .+..||||++..... ....+++.+|++++++++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455678999999999999864 368899999876532 3345678999999999999999999998854322 1
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
..++++||+++|+|.+++..... ....+++...++++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-----FIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----EeecccchhhEEEcCCCCEEEC
Confidence 24789999999999998864321 1234789999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhhcc
Q 005586 560 DCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 560 DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|||+++........ ......++..|++||.+....++.++|||||||++|||++ |+.|+........ ...+..
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~----~~~~~~- 230 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI----YNYLIK- 230 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH----HHHHHc-
Confidence 99999876443211 1122234567999999988889999999999999999999 8888864422111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
......+......+.+++.+|++.+|++||++.|+++.|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111112233456899999999999999999999999999865
No 238
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-36 Score=316.31 Aligned_cols=252 Identities=16% Similarity=0.315 Sum_probs=203.3
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.+|+..+.||.|+||.||+|.. .+|+.|++|.+.... ......+.+|+..++.++||||+++++++.. .+..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEEE
Confidence 3577788999999999999986 478999999987654 3345678899999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++... .++|.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 96 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~~-----i~H~dL~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 96 EYLAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHANQ-----VIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred EecCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEccCccchhc
Confidence 999999999998643 3899999999999999999999987 999999999999999999999999998866
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh-ccccCCCCCHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI-DRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 646 (689)
...... .....++..|+|||.+.+..++.++|||||||++|||+||+.||......... .... ........+..
T Consensus 166 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~ 240 (296)
T cd06655 166 TPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----YLIATNGTPELQNPEK 240 (296)
T ss_pred cccccc-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcCCcccCCccc
Confidence 443221 12234677899999998888999999999999999999999999653221111 1111 11111112334
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....+.+++.+||..||++||++.+++++-+.
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~ 272 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 45678899999999999999999999987544
No 239
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.3e-36 Score=315.48 Aligned_cols=257 Identities=21% Similarity=0.351 Sum_probs=193.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhcc---CCCcceeEeeEEEcC---CCC
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSL---RHENIIRLRGFCCSR---GRG 481 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~---~~~ 481 (689)
+|...+.||+|+||.||+|..+ +|+.||+|.++..... .....+.+|+.++.++ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4677889999999999999876 6899999998754322 2223456677766655 799999999987532 234
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHANC-----IVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCCCEEECcc
Confidence 5799999997 589998875432 34899999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh-------
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF------- 634 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~------- 634 (689)
|+++...... ......++..|+|||++.+..++.++||||+||++|||++|+.||................
T Consensus 153 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07863 153 GLARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 230 (288)
T ss_pred CccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 9998764322 1123456788999999988899999999999999999999999985432211110000000
Q ss_pred hc-------cccCC-------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 635 ID-------RNLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 635 ~~-------~~~~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.. ..... ........++.+++.+|++.||++||++.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp 286 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 00 00000 00112355688999999999999999999998763
No 240
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.7e-37 Score=312.94 Aligned_cols=239 Identities=19% Similarity=0.429 Sum_probs=187.6
Q ss_pred cccccCCcceEEEEEecC--------CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 415 NLLGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.||+|+||.||+|..+. ...||+|.+.... ....++|.+|+.+++.++|||++++++++.. .+..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVC--GDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEe--CCCcEEE
Confidence 369999999999998642 2348888876443 3344678999999999999999999999865 3668999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC--------eEE
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN--------PLI 558 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~--------~kl 558 (689)
|||+++|+|.++++.... .++|..+++++.|++.||+|||+.+ |+||||||+||+++.++. +|+
T Consensus 78 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-----iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLEDKG-----LTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred EecCCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCccceEEEecccccccCCCceEEe
Confidence 999999999999986542 4899999999999999999999987 999999999999988765 589
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCC-CCcchhHHHHHhhhhhhHhhc
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGS-LVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~ 636 (689)
+|||++....... ...++..|+|||++.+ ..++.++|||||||++|||++|. .|+....... . ..+..
T Consensus 150 ~d~g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~----~~~~~ 219 (258)
T cd05078 150 SDPGISITVLPKE-----ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-K----LQFYE 219 (258)
T ss_pred cccccccccCCch-----hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-H----HHHHH
Confidence 9999887554321 2346678999999876 45799999999999999999995 4543221111 0 11111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 637 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 637 ~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
. ...++.....++.+++..||+.+|++||++++++++|
T Consensus 220 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 220 D--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred c--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1 1223333456789999999999999999999999987
No 241
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5e-37 Score=329.03 Aligned_cols=253 Identities=19% Similarity=0.289 Sum_probs=196.5
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||+|+||.||++..+ +++.||+|++..... ......+..|+.++.+++||||+++++.+. ..+..++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--DKRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEEE
Confidence 36778899999999999999876 689999999975321 233457888999999999999999999884 4578999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 79 v~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH~~g-----ivHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 79 IMEFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIHQLG-----FIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred EEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 999999999999997643 3889999999999999999999988 9999999999999999999999999987
Q ss_pred cccCCcee----------------------------------eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHH
Q 005586 566 LLADDIVF----------------------------------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 611 (689)
Q Consensus 566 ~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~el 611 (689)
.+...... ......||..|+|||++.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence 54321100 01123578899999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH--HHHHHHHHHHHHhccCCCCCCC---CHHHHHHHHH
Q 005586 612 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE--SEAAKLGKMALVCTHEDPENRP---TMEAVIEELT 677 (689)
Q Consensus 612 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~Cl~~dp~~RP---s~~evl~~L~ 677 (689)
+||+.||........ +..+........++. ..+.++.+++.+++ .||++|+ ++.|++++-+
T Consensus 230 ~tG~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~ 295 (360)
T cd05627 230 LIGYPPFCSETPQET----YRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPF 295 (360)
T ss_pred ccCCCCCCCCCHHHH----HHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCC
Confidence 999999965432221 111111110001111 13456677777765 4999998 4788887754
No 242
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=296.76 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=207.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.|+..+.||+|.|+.||++..+ +|+.+|+|.+..... ....+++.+|+++-+.++|||||+|..-+.+ ....++|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cceeEEE
Confidence 34566688999999999999865 799999999876543 2355788999999999999999999987743 4788999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC---CCCeEEecccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIADCGL 563 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~---~~~~kl~DfGl 563 (689)
+|+|++|+|..-+-... ..++...-..+.||+++|.|+|.++ |||||+||+|++|-. .--+|++|||+
T Consensus 89 Fe~m~G~dl~~eIV~R~----~ySEa~aSH~~rQiLeal~yCH~n~-----IvHRDvkP~nllLASK~~~A~vKL~~FGv 159 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVARE----FYSEADASHCIQQILEALAYCHSNG-----IVHRDLKPENLLLASKAKGAAVKLADFGL 159 (355)
T ss_pred EecccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcC-----ceeccCChhheeeeeccCCCceeecccce
Confidence 99999999987765542 3677888899999999999999988 999999999999953 34479999999
Q ss_pred cccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc--CC
Q 005586 564 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL--KG 641 (689)
Q Consensus 564 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 641 (689)
+..+.++. ...+..||++|||||++...+|+..+|||+.||+||-|+.|..||.+... ...+++++.... .+
T Consensus 160 Ai~l~~g~--~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~----~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 160 AIEVNDGE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYEQIKAGAYDYPS 233 (355)
T ss_pred EEEeCCcc--ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH----HHHHHHHhccccCCCC
Confidence 99887443 34456799999999999999999999999999999999999999976322 122333332221 22
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.+.....++..+++.+|+..||++|.|+.|.+++.|...
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 233455678999999999999999999999999877653
No 243
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-36 Score=307.36 Aligned_cols=251 Identities=19% Similarity=0.372 Sum_probs=202.9
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|+||.||++... +|+.||+|++..... .....++.+|++++++++||||+++++++. ..+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE--ENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec--CCCeEEEEE
Confidence 4777899999999999999875 689999999875432 334568999999999999999999999884 457899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++..... ..+++.+++.++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 79 e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~~l~~~nil~~~~~~~~l~d~~~~~~~ 151 (256)
T cd08218 79 DYCEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDRK-----ILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151 (256)
T ss_pred ecCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence 99999999999976432 24789999999999999999999987 999999999999999999999999999766
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...... .....++..|+|||+..+..++.++|||||||+++||+||+.|+....... ....++... ....+...
T Consensus 152 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~ 225 (256)
T cd08218 152 NSTVEL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN----LVLKIIRGS-YPPVSSHY 225 (256)
T ss_pred Ccchhh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH----HHHHHhcCC-CCCCcccC
Confidence 443211 112346778999999988889999999999999999999999986432111 111111111 11233445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..++.+++.+||+.+|++||+|.||+++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 6779999999999999999999999986
No 244
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.8e-36 Score=309.30 Aligned_cols=249 Identities=22% Similarity=0.415 Sum_probs=199.4
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCch--------HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS--------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
|.....||+|+||.||+|... +++.||+|.+....... ..+.+.+|+.++++++||||+++++++.. .+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--AD 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CC
Confidence 556689999999999999875 68899999887543211 12568899999999999999999999854 46
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~~~-----ivH~di~p~nil~~~~~~~~l~df 150 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHNRG-----IIHRDIKGANILVDNKGGIKISDF 150 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHhcC-----cccccCCHHHEEEcCCCCEEeccc
Confidence 7899999999999999997643 3889999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceee-----eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc
Q 005586 562 GLHKLLADDIVFS-----VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 562 Gla~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 636 (689)
|+++......... .....++..|+|||.+.+..++.++|||||||++|||+||+.||....... .+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~ 226 (267)
T cd06628 151 GISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----AIFKIGE 226 (267)
T ss_pred CCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----HHHHHhc
Confidence 9998765321111 111236678999999988889999999999999999999999996532211 1111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 637 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 637 ~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
......+......+.+++.+||+.||.+||++.||+++
T Consensus 227 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 227 -NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 11223344456788999999999999999999999875
No 245
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.9e-36 Score=308.82 Aligned_cols=255 Identities=21% Similarity=0.368 Sum_probs=204.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||+|... ++..+|+|++...........+.+|++.++.++|+|++++++.+.. .+..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEEE
Confidence 36788899999999999999865 6889999999765544466789999999999999999999998844 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.++++.... ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++..+
T Consensus 79 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~-----i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 79 PYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG-----QIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred eccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 99999999999976432 134899999999999999999999987 999999999999999999999999998876
Q ss_pred cCCcee---eeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc---ccC
Q 005586 568 ADDIVF---SVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR---NLK 640 (689)
Q Consensus 568 ~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~~ 640 (689)
...... ......++..|+|||++... .++.++|||||||++|||++|+.|+....... .+.+.... .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~ 228 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTLQNDPPSLE 228 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHhcCCCCCcC
Confidence 543221 11223467789999998776 78999999999999999999999986432211 11111111 111
Q ss_pred CCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 641 GKF-SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 641 ~~~-~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
... ....+.++.+++..|++.||++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 12345678999999999999999999999986
No 246
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.4e-36 Score=309.40 Aligned_cols=251 Identities=24% Similarity=0.382 Sum_probs=200.2
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCC-----chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-----KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|...+|+.+|+|.+..... ......+.+|++++++++|+||+++++++.+ .+..+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCeEE
Confidence 3667789999999999999988899999999875421 1223568899999999999999999999954 47899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++
T Consensus 79 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 79 IFMEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNNC-----VVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred EEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCcCHHhEEECCCCeEEeccchhh
Confidence 9999999999999997543 3789999999999999999999887 999999999999999999999999998
Q ss_pred ccccCCc-----eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc-c
Q 005586 565 KLLADDI-----VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-N 638 (689)
Q Consensus 565 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-~ 638 (689)
+...... ........++..|+|||++.+..++.++|||||||++|||+||+.||......... ...... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~ 225 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM----FYIGAHRG 225 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH----HHhhhccC
Confidence 7653211 01112234678899999999888999999999999999999999999643221111 011111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 639 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 639 ~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.....+.....++.+++.+||+.+|++||++.|++++
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 226 LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1122333456678999999999999999999999875
No 247
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.7e-36 Score=307.46 Aligned_cols=249 Identities=23% Similarity=0.369 Sum_probs=200.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC----chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC----KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|..+ ++..|++|.+..... +...+.|.+|++++++++|+||+++++++.. ....+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE--EDNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec--CCeEE
Confidence 3666789999999999999986 799999999865432 2244679999999999999999999999843 47889
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.+||+|||++
T Consensus 79 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 79 IFLELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDRN-----TVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred EEEEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEccCccc
Confidence 9999999999999997543 3889999999999999999999987 999999999999999999999999998
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCC-CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
....... ......++..|+|||.+.... ++.++|+|||||++|||++|+.||......... ............
T Consensus 150 ~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~ 223 (258)
T cd06632 150 KQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV----FKIGRSKELPPI 223 (258)
T ss_pred eeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH----HHHHhcccCCCc
Confidence 8664432 122344677899999987766 899999999999999999999998654311111 111110111223
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+......+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 34456778899999999999999999999875
No 248
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.4e-37 Score=311.95 Aligned_cols=254 Identities=27% Similarity=0.485 Sum_probs=199.5
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHH-HHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~-~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|+..+.||+|+||.||+++.. ++..||+|++......... ....+|+.++.+++||||+++++++.. ....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 445689999999999999986 5778999999877543332 244669999999999999999999965 578899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+..+.
T Consensus 79 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh~~~-----i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLHSKG-----IVHRDIKPENILLDENGEVKLIDFGSSVKLS 149 (260)
T ss_dssp EETTEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHHHTT-----EEESSBSGGGEEESTTSEEEESSGTTTEEST
T ss_pred ccccccccccccccc----ccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccc
Confidence 999999999998332 4899999999999999999999987 9999999999999999999999999987642
Q ss_pred CCceeeeecCCCCCCCCCccccc-cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC--CCCH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVT-TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--KFSE 645 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 645 (689)
.. ........++..|+|||.+. +..++.++||||+|+++|||++|+.|+....... ....+.+........ ....
T Consensus 150 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T PF00069_consen 150 EN-NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD-QLEIIEKILKRPLPSSSQQSR 227 (260)
T ss_dssp ST-TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH-HHHHHHHHHHTHHHHHTTSHT
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccchh-hhhhhhhcccccccccccccc
Confidence 21 12333456778899999998 7889999999999999999999999997641100 011111111110000 0011
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
....++.+++..|++.||++||++.+++++-+
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 11378999999999999999999999997643
No 249
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.5e-36 Score=306.61 Aligned_cols=254 Identities=20% Similarity=0.318 Sum_probs=202.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|... +++.+++|.+.... ....+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-GDDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-hhhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEEEE
Confidence 56788899999999999999875 57899999998654 2355789999999999999999999998854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 80 e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~-----i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 80 EYCGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHETG-----KIHRDIKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred eCCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----ceecCCChhhEEECCCCCEEECccccchhh
Confidence 9999999999987652 24889999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccC---CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG---RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
..... ......++..|+|||.+.+. .++.++|||||||++|||+||+.|+..................+ ......
T Consensus 152 ~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 229 (262)
T cd06613 152 TATIA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDK 229 (262)
T ss_pred hhhhh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccch
Confidence 43221 11223467789999998776 78999999999999999999999986432111111000000010 011123
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...+.++.+++.+||..+|.+||++.+|+.+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 3456789999999999999999999999864
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-36 Score=319.56 Aligned_cols=256 Identities=16% Similarity=0.323 Sum_probs=192.7
Q ss_pred ccccccC--CcceEEEEEec-CCcEEEEEEecccCCch-HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 414 VNLLGKG--NFSSVYKGTLR-DGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 414 ~~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
.++||+| +|++||++..+ +|..||+|++....... ....+.+|+++++.++||||+++++++.. .+..++||||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DNELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE--CCEEEEEEec
Confidence 4689999 78899999875 78999999997654332 34567789999999999999999999954 4689999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.......
T Consensus 81 ~~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~-----iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 81 MAYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHMG-----YVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred cCCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 999999999975432 24899999999999999999999987 99999999999999999999999986543321
Q ss_pred Cce-ee-----eecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh----hhhhhHhhcc
Q 005586 570 DIV-FS-----VLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE----SATFENFIDR 637 (689)
Q Consensus 570 ~~~-~~-----~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~----~~~~~~~~~~ 637 (689)
... .. .....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... .......++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 233 (327)
T ss_pred ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence 110 00 011234567999999875 45899999999999999999999999642211100 0000000000
Q ss_pred -------------------cc-----------------CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 638 -------------------NL-----------------KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 638 -------------------~~-----------------~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.. ...........+.+++.+||+.||++|||++|++++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f 310 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 310 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence 00 000112235578999999999999999999999987544
No 251
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-36 Score=315.57 Aligned_cols=254 Identities=15% Similarity=0.288 Sum_probs=203.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.+|...+.||+|+||.||+|... +|+.||+|.+..... .....+.+|+.+++.++|+||+++++++.. .+..++||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEee
Confidence 56788899999999999999964 799999999976542 344678899999999999999999999854 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 96 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~~-----i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 96 EYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSNQ-----VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred cccCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 999999999998643 3789999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...... .....++..|+|||.+.+..++.++|||||||++|||+||+.||.......... ............+...
T Consensus 166 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~ 241 (297)
T cd06656 166 TPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERL 241 (297)
T ss_pred cCCccC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCcccc
Confidence 443211 112346778999999998889999999999999999999999995432111100 0000000011123344
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.+++.+||+.+|++||++.+++++-+..
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence 56788999999999999999999999976543
No 252
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-36 Score=312.31 Aligned_cols=256 Identities=21% Similarity=0.363 Sum_probs=203.5
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||+|+||.||++... +|..||+|.+..........+|.+|++++.+++|+||+++++++.. .+..++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e 79 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMCME 79 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEEEe
Confidence 5677889999999999999986 7899999998765434445689999999999999999999998854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|+++++|..+++.... ...+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++..+
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 80 YMDAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKEEHN-----IIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred ecCCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhcCC-----EeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999999999876421 23589999999999999999999963 4 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccC------CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG------RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
..... ....++..|+|||.+.+. .++.++|||||||++|||+||+.||........ ...+..+.+. ...
T Consensus 154 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~-~~~ 228 (286)
T cd06622 154 VASLA---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-FAQLSAIVDG-DPP 228 (286)
T ss_pred cCCcc---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-HHHHHHHhhc-CCC
Confidence 43221 123466789999998554 358899999999999999999999864321111 1111222221 122
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+.....++.+++.+|++.+|++||++.+++.+.+.
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 229 TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence 3445567789999999999999999999999987653
No 253
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.5e-36 Score=316.81 Aligned_cols=254 Identities=22% Similarity=0.351 Sum_probs=189.5
Q ss_pred ccccccCCcceEEEEEec---CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 414 VNLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
.+.||+|+||.||+|+.+ +++.||+|.+.... ....+.+|++++++++||||+++++++........++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 468999999999999865 46789999987543 234577899999999999999999988766667789999999
Q ss_pred CCCCHHHHhhhcCC-----CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee----cCCCCeEEecc
Q 005586 491 PKGKLSKYLDQEEG-----SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI----DQQFNPLIADC 561 (689)
Q Consensus 491 ~~gsL~~~L~~~~~-----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl----~~~~~~kl~Df 561 (689)
+ ++|.+++..... ....+++.....|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+||
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-----ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-----VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----EEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 5 588888754321 1235889999999999999999999987 9999999999999 45678999999
Q ss_pred cccccccCCce--eeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHH---------Hhh-
Q 005586 562 GLHKLLADDIV--FSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLA---------AES- 628 (689)
Q Consensus 562 Gla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~---------~~~- 628 (689)
|+++....... .......+|..|+|||++.+ ..++.++||||+||++|||+||+.||....... ...
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 236 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHH
Confidence 99987654321 11223457888999999876 458999999999999999999999985321100 000
Q ss_pred ----------hhhhHhh--------ccccCC-CC------------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 629 ----------ATFENFI--------DRNLKG-KF------------SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 629 ----------~~~~~~~--------~~~~~~-~~------------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+.+.. ...... .. ......++.+++.+|++.||++|||++|++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp 315 (317)
T cd07868 237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 315 (317)
T ss_pred HHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 0000000 000000 00 000123578999999999999999999999763
No 254
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.4e-36 Score=309.77 Aligned_cols=251 Identities=21% Similarity=0.388 Sum_probs=203.3
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
-|+..+.||+|+||.||+|... ++..||+|.+...........|.+|+..+.+++||||+++++++.. ....++|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEEEE
Confidence 4666789999999999999865 6899999998765544556789999999999999999999999854 467899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++... .+++.....++.|++.|+.|||+.+ ++|+||||+||++++++.++|+|||+++...
T Consensus 83 ~~~~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 83 YLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEK-----KIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred eCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccCC-----eecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 99999999998642 3889999999999999999999987 9999999999999999999999999987664
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.... ......++..|+|||++.+..++.++|||||||++|||++|+.|+........ ...+.............
T Consensus 153 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 226 (277)
T cd06641 153 DTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV-----LFLIPKNNPPTLEGNYS 226 (277)
T ss_pred cchh-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH-----HHHHhcCCCCCCCcccC
Confidence 4321 11123467789999999888899999999999999999999999864322111 11111111222334456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+.+++.+|++.+|++||++.+++++-..
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 256 (277)
T cd06641 227 KPLKEFVEACLNKEPSFRPTAKELLKHKFI 256 (277)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 678899999999999999999999997433
No 255
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.2e-36 Score=307.15 Aligned_cols=238 Identities=22% Similarity=0.464 Sum_probs=188.2
Q ss_pred cccccCCcceEEEEEecC-C----------cEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 415 NLLGKGNFSSVYKGTLRD-G----------TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
+.||+|+||.||+|.+++ + ..|++|.+...... ...|.+|+.++++++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR---DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec---CCc
Confidence 469999999999999864 3 25788877654322 5789999999999999999999999855 467
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-------Ce
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-------NP 556 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-------~~ 556 (689)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDKK-----LVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCC-----eecccCccceEEEecCccccCCceeE
Confidence 899999999999999986542 4899999999999999999999887 99999999999999888 79
Q ss_pred EEecccccccccCCceeeeecCCCCCCCCCccccccC--CCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhH
Q 005586 557 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG--RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 557 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 633 (689)
||+|||+++...... ...++..|+|||++... .++.++|||||||++|||++ |..|+...... .....+
T Consensus 148 kl~Dfg~a~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~-- 219 (259)
T cd05037 148 KLSDPGIPITVLSRE-----ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFY-- 219 (259)
T ss_pred EeCCCCccccccccc-----ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHH--
Confidence 999999998654311 22345679999998776 78999999999999999999 46666443211 111111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.... ..+......+.+++..||..+|++||++.||++.|.
T Consensus 220 -~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 -QDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -hcCC---CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0111 111112278899999999999999999999999873
No 256
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-36 Score=310.23 Aligned_cols=252 Identities=21% Similarity=0.327 Sum_probs=196.8
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++..++||||+++++++.. .+..++|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEE
Confidence 35666788999999999999875 68999999987654 3344568899999999999999999998854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... .+++.+.+.++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||++...
T Consensus 86 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 86 EFCGGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHSKG-----KMHRDIKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred eccCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence 9999999999987543 4889999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh-hhHhhccccCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT-FENFIDRNLKGKF 643 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 643 (689)
..... ......++..|+|||++. ...++.++|||||||++|||++|+.|+............ ......+....
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (267)
T cd06645 157 TATIA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD-- 233 (267)
T ss_pred cCccc-ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc--
Confidence 43221 122345778899999874 456889999999999999999999998543211100000 00000011110
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....+..+.+++.+|++.+|++||++++|+++
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 01234568899999999999999999999875
No 257
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.6e-36 Score=312.27 Aligned_cols=263 Identities=22% Similarity=0.372 Sum_probs=205.0
Q ss_pred cCHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEE
Q 005586 399 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCC 476 (689)
Q Consensus 399 ~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~ 476 (689)
.++.++..+.+.|+..+.||+|+||.||+|... +++.||+|.+.... ....++..|+.++.++ +|+||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 355566667788999999999999999999975 68899999986542 3445788999999998 7999999999885
Q ss_pred cC----CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 477 SR----GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 477 ~~----~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
.. .....++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~-----ivH~dl~~~nili~~ 156 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAHK-----VIHRDIKGQNVLLTE 156 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECC
Confidence 32 24578999999999999999976432 34788889999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh
Q 005586 553 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE 627 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~ 627 (689)
++.++|+|||+++....... ......++..|+|||.+. ...++.++|||||||++|||+||+.|+........
T Consensus 157 ~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~- 234 (282)
T cd06636 157 NAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA- 234 (282)
T ss_pred CCCEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-
Confidence 99999999999876532211 112234677899999875 34678899999999999999999999964322111
Q ss_pred hhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 628 SATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.................+.++.+++..||+.||++||++.|++++
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 235 ---LFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ---hhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111111111111122345679999999999999999999999875
No 258
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-36 Score=317.33 Aligned_cols=259 Identities=18% Similarity=0.364 Sum_probs=198.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|..+ ++..||+|.+...........+.+|+.++++++||||+++++++.. .+..++||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec--CCeEEEEE
Confidence 45777899999999999999876 6889999999765444444568899999999999999999999854 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++.... ..+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 84 EYLD-KDLKQYLDDCG---NSINMHNVKLFLFQLLRGLNYCHRRK-----VLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred eccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 9997 69999987643 24889999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh-----------hhhhHhh
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES-----------ATFENFI 635 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~-----------~~~~~~~ 635 (689)
..... ......++..|+|||.+.+. .++.++|||||||++|||+||+.||.......... ..+..++
T Consensus 155 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 155 SIPTK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred CCCCC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 33211 11223456789999987653 57889999999999999999999986432111000 0000110
Q ss_pred cc---------ccCCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 636 DR---------NLKGK----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 636 ~~---------~~~~~----~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+. ..... ........+.+++.+|++.||.+|||++|++++-+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 00 00000 0112345688999999999999999999999876554
No 259
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.3e-36 Score=309.76 Aligned_cols=258 Identities=21% Similarity=0.381 Sum_probs=203.4
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC----C
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG----R 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~----~ 480 (689)
++++|+..+.||+|+||.||+|..+ +++.+++|++.... ....+|.+|+.+++++ +|+||+++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 5678999999999999999999985 67899999987653 2446799999999999 7999999999986533 3
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++||||+++++|.+++.........+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-----i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-----VIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-----cccCCCCHHHEEEccCCeEEECC
Confidence 4589999999999999998764422345899999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 635 (689)
||++........ ......++..|+|||++.. ..++.++|||||||++|||+||+.|+........ ..++.
T Consensus 157 ~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~ 231 (275)
T cd06608 157 FGVSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA----LFKIP 231 (275)
T ss_pred Cccceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH----HHHhh
Confidence 999876543221 1122346778999998753 3467899999999999999999999964321111 11111
Q ss_pred cccc-CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 DRNL-KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ~~~~-~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.... ....+......+.+++.+|+..||++||++.|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 232 RNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred ccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 1111 1111233566899999999999999999999998753
No 260
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-36 Score=332.42 Aligned_cols=252 Identities=18% Similarity=0.223 Sum_probs=193.2
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
...|...+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+|||++++++.. .+..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~--~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVV--GGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEEEE
Confidence 346888999999999999999986 588999996432 246789999999999999999999854 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+ .++|.+++.... ..++|.+++.|+.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 239 ~e~~-~~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~g-----IvHrDLKP~NILl~~~~~vkL~DFGla~~ 309 (461)
T PHA03211 239 LPKY-RSDLYTYLGARL---RPLGLAQVTAVARQLLSAIDYIHGEG-----IIHRDIKTENVLVNGPEDICLGDFGAACF 309 (461)
T ss_pred EEcc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----EEECcCCHHHEEECCCCCEEEcccCCcee
Confidence 9999 479999886543 24899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH---hhhhhhHhhcc-----
Q 005586 567 LADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA---ESATFENFIDR----- 637 (689)
Q Consensus 567 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~---~~~~~~~~~~~----- 637 (689)
....... ......||..|+|||++.+..++.++|||||||++|||++|..|+........ ....+.+++..
T Consensus 310 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~ 389 (461)
T PHA03211 310 ARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHV 389 (461)
T ss_pred cccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccc
Confidence 6433211 11234588999999999999999999999999999999998865532110000 00000000000
Q ss_pred ---------------------ccCCCCC----H---HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 638 ---------------------NLKGKFS----E---SEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 638 ---------------------~~~~~~~----~---~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
....... . .....+.+++.+|++.||++|||+.|++++-+
T Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 390 DEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred ccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 0000000 0 11236889999999999999999999998854
No 261
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=324.13 Aligned_cols=245 Identities=27% Similarity=0.403 Sum_probs=200.9
Q ss_pred ccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCC
Q 005586 416 LLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGK 494 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gs 494 (689)
+||+|.||+||-|+.. +...+|||.+.... ....+-..+||.+-++++|.|||+++|.|. .++..-|.||.+|+|+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s--enGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVS--ENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccC--CCCeEEEEeecCCCCc
Confidence 8999999999999976 46779999998765 344567889999999999999999999884 3578889999999999
Q ss_pred HHHHhhhcCCCCCCC--CHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecccccccccCCc
Q 005586 495 LSKYLDQEEGSSNVL--DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 495 L~~~L~~~~~~~~~l--~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~~~~~~~ 571 (689)
|.++|+.+-+. + .+.+.-.+..||++||.|||+.. |||||||-.|||++. .|.+||+|||-++.+..-.
T Consensus 659 LSsLLrskWGP---lKDNEstm~fYtkQILeGLkYLHen~-----IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin 730 (1226)
T KOG4279|consen 659 LSSLLRSKWGP---LKDNESTMNFYTKQILEGLKYLHENK-----IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN 730 (1226)
T ss_pred HHHHHHhccCC---CccchhHHHHHHHHHHHHhhhhhhcc-----eeeccccCCcEEEeeccceEEecccccchhhccCC
Confidence 99999987652 4 66777788999999999999987 999999999999985 7899999999999876432
Q ss_pred eeeeecCCCCCCCCCccccccC--CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTTG--RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~~--~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
.. +....||..|||||++..+ .|..++|||||||.+.||.||++||...... ...+-++---...+.+|++.+.
T Consensus 731 P~-TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---qAAMFkVGmyKvHP~iPeelsa 806 (1226)
T KOG4279|consen 731 PC-TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---QAAMFKVGMYKVHPPIPEELSA 806 (1226)
T ss_pred cc-ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh---hHhhhhhcceecCCCCcHHHHH
Confidence 22 2235689999999999765 4889999999999999999999999642111 0011111111234567889999
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 650 KLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+...++.+|+.+||.+||++++++++
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhccC
Confidence 99999999999999999999999875
No 262
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4e-36 Score=310.45 Aligned_cols=256 Identities=18% Similarity=0.330 Sum_probs=203.0
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|..+ ++..||+|.+.... ......|.+|++++++++||||+++++++.. ....++||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEe
Confidence 46777889999999999999975 68999999987553 3445689999999999999999999999854 57889999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 82 e~~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~~-----i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 82 EFCDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLHSHK-----VIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred eccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCChhhEEECCCCCEEEccCccchhh
Confidence 9999999999987643 24899999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccc-cCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKG 641 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 641 (689)
..... ......++..|+|||.+. ...++.++||||||+++|||++|+.|+....... ....+.... ...
T Consensus 154 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~ 228 (280)
T cd06611 154 KSTLQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----VLLKILKSEPPTL 228 (280)
T ss_pred ccccc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH----HHHHHhcCCCCCc
Confidence 43221 112234677899999874 3457789999999999999999999986532111 111111110 011
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
..+...+.++.+++..||+.+|++||++.+++++-+...
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 122334567889999999999999999999998865543
No 263
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.9e-36 Score=310.30 Aligned_cols=254 Identities=20% Similarity=0.323 Sum_probs=199.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+.|+..+.||+|+||.||+|+.. ++..|++|.+.... ....+.|.+|++++++++||||+++++++.. ....++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYW--DGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe--CCeEEEEE
Confidence 45667789999999999999976 58999999987653 3455789999999999999999999998854 46799999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|..++..... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 89 e~~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 89 EFCPGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHSMK-----IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred ecCCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCC-----eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999988865432 4899999999999999999999987 999999999999999999999999998754
Q ss_pred cCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc-CC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL-KG 641 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 641 (689)
..... ......++..|+|||++. ...++.++|||||||++|||++|+.|+....... ...+...... ..
T Consensus 161 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~ 235 (292)
T cd06644 161 VKTLQ-RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR----VLLKIAKSEPPTL 235 (292)
T ss_pred ccccc-ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH----HHHHHhcCCCccC
Confidence 33211 112234667899999985 3456889999999999999999999986432111 1111111110 01
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+...+.++.+++.+||+.+|++||++.|++++-..
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 1223445678999999999999999999999986543
No 264
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.8e-36 Score=317.54 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=189.0
Q ss_pred ccccccCCcceEEEEEec---CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 414 VNLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
...||+|+||.||+|..+ ++..||+|.+.... ....+.+|++++++++||||+++++++........++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 368999999999999975 45789999987543 234678899999999999999999998766667889999999
Q ss_pred CCCCHHHHhhhcCC-----CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee----cCCCCeEEecc
Q 005586 491 PKGKLSKYLDQEEG-----SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI----DQQFNPLIADC 561 (689)
Q Consensus 491 ~~gsL~~~L~~~~~-----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl----~~~~~~kl~Df 561 (689)
+ ++|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+||
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 83 E-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-----VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred C-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-----EEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 6 578887753221 1235889999999999999999999987 9999999999999 56789999999
Q ss_pred cccccccCCce--eeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH-----hh-----
Q 005586 562 GLHKLLADDIV--FSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA-----ES----- 628 (689)
Q Consensus 562 Gla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~-----~~----- 628 (689)
|+++....... .......+|..|+|||++.+ ..++.++|||||||++|||+||+.||........ ..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR 236 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHH
Confidence 99987654321 11223356788999999876 4579999999999999999999999853211000 00
Q ss_pred ----------hhhhHh---------hccccCCCC------------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 629 ----------ATFENF---------IDRNLKGKF------------SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 629 ----------~~~~~~---------~~~~~~~~~------------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+.++ ........+ .......+.+++.+|++.||++|||+.|++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp 315 (317)
T cd07867 237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP 315 (317)
T ss_pred HHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence 000000 000000000 001134578899999999999999999999763
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-36 Score=314.14 Aligned_cols=252 Identities=15% Similarity=0.321 Sum_probs=199.4
Q ss_pred cccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 413 EVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
....||+|+||.||++... ++..||||++.... ......+.+|+..+..++|+||+++++.+.. .+..++||||++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv~e~~~ 102 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVVMEFLE 102 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEEEeCCC
Confidence 3467999999999999875 68899999986543 3445678999999999999999999998854 578899999999
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
+++|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 103 ~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~-----ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 103 GGALTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQG-----VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----EeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999988542 3889999999999999999999987 9999999999999999999999999987654322
Q ss_pred eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKL 651 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 651 (689)
. ......++..|+|||+..+..++.++|||||||++|||++|+.|+......... ..+...+.+... ........+
T Consensus 173 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~ 248 (292)
T cd06658 173 P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDNLPPRVK--DSHKVSSVL 248 (292)
T ss_pred c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCCccc--cccccCHHH
Confidence 1 112234677899999998888999999999999999999999998643221111 111111111111 112335578
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 652 GKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 652 ~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
.+++..|+..||++||++.|++++-+....
T Consensus 249 ~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 249 RGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred HHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 899999999999999999999998655533
No 266
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.2e-36 Score=311.46 Aligned_cols=256 Identities=19% Similarity=0.366 Sum_probs=194.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|+..+.||+|+||.||+|..+ +++.||+|.+...........+.+|++++++++|+||+++++++.. .+..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT--KKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec--CCeEEEEE
Confidence 46778899999999999999976 6899999998765433334567889999999999999999999853 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++..... .+++.....++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~~~-----i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 83 EYLD-TDLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQRR-----VLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred ecCC-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----eecccCCHHHEEEcCCCCEEECcccccccc
Confidence 9997 599999876432 4889999999999999999999987 999999999999999999999999998754
Q ss_pred cCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh------------hHh
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF------------ENF 634 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~------------~~~ 634 (689)
..... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||............. ...
T Consensus 154 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 154 SVPSK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred CCCCc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhh
Confidence 32211 1112235678999998865 457899999999999999999999985432110000000 000
Q ss_pred hc------cccCCCCC-------HHH--HHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 635 ID------RNLKGKFS-------ESE--AAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 635 ~~------~~~~~~~~-------~~~--~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+ .......+ ... ...+.+++..|++.+|++||++.|++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~ 289 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence 00 00000000 011 26778999999999999999999998753
No 267
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.9e-36 Score=313.76 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=197.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+.||+|+||.||+|..+ +++.||+|++...... .....+.+|+++++.++||||+++++++. ..+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR--RKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc--cCCeEEEE
Confidence 35778899999999999999986 5899999998754432 23457889999999999999999999984 45789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++++|.++..... .++|..++.++.|++.||+|||+.+ |+||||+|+||++++++.+||+|||+++.
T Consensus 79 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~-----i~h~~l~p~ni~~~~~~~~~l~dfg~~~~ 149 (286)
T cd07846 79 FEFVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFART 149 (286)
T ss_pred EecCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEECCCCcEEEEeeeeeee
Confidence 99999999988775432 3899999999999999999999987 99999999999999999999999999886
Q ss_pred ccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh----------hHh-
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF----------ENF- 634 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~----------~~~- 634 (689)
...... ......++..|+|||++.+ ..++.++|||||||++|||++|+.|+............. .+.
T Consensus 150 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 150 LAAPGE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred ccCCcc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 644321 1122346778999999865 457889999999999999999998885432111100000 000
Q ss_pred -----hccccCCCC---------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 635 -----IDRNLKGKF---------SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 635 -----~~~~~~~~~---------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
++....... ....+..+.+++.+||+.+|++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000 11235679999999999999999999999876
No 268
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.7e-36 Score=311.44 Aligned_cols=256 Identities=23% Similarity=0.378 Sum_probs=195.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||+|..+ +|..||+|++..... ......+.+|+.++.+++||||+++++++.. ....++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 3667789999999999999975 689999999875432 2234678899999999999999999999854 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++..... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 79 e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 79 EFLS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSRR-----VLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred ecCC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhCC-----eeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 9997 689988865432 235899999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh---------------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF--------------- 631 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~--------------- 631 (689)
..... ......++..|+|||.+.+. .++.++|||||||++|||+||+.|+............+
T Consensus 152 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 152 GIPVR-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred CCCcc-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence 43211 11223456789999987654 57899999999999999999999986432111100000
Q ss_pred -----hHhhccccCC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 632 -----ENFIDRNLKG---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 632 -----~~~~~~~~~~---~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....+..... ......+.++.+++.+|++.||++||++.+|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000 0011235577899999999999999999999876
No 269
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.4e-36 Score=305.00 Aligned_cols=251 Identities=22% Similarity=0.392 Sum_probs=200.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||+|... +++.|++|.+...... ...+.+..|++++++++|+||+++++++. ..+..++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV--HREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe--cCCEEEEEE
Confidence 4677789999999999999875 6899999999866532 35678999999999999999999999874 357899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... .+++..+..|+.+++.||+|||+.+ |+|+||+|+||++++++.+||+|||++...
T Consensus 79 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~-----i~H~dl~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 79 EYCSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHSHG-----IVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred ecCCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEccccccccc
Confidence 9999999999997642 3788999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeee---ecCCCCCCCCCccccccCC---CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 568 ADDIVFSV---LKTSAAMGYLAPEYVTTGR---FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 568 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~---~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
........ ....++..|+|||++.+.. ++.++||||||+++||+++|+.||.............. .....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~ 225 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG----AGHKP 225 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh----cCCCC
Confidence 54322111 1234677899999988766 88999999999999999999999964321111100000 01111
Q ss_pred CCCHH--HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 642 KFSES--EAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 642 ~~~~~--~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..+.. ....+.+++..||+.+|++||++.|++.+
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 226 PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 22222 26678899999999999999999999865
No 270
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8e-36 Score=305.03 Aligned_cols=254 Identities=20% Similarity=0.375 Sum_probs=206.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|...+.||+|++|.||+|..+ ++..|++|++..........+|.+|++.+.+++|+||+++++++.. ....++|||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK--EGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc--CCeEEEEEE
Confidence 5777899999999999999987 5999999999876543456789999999999999999999999854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|+++++|.+++... ..+++..++.++.|+++||+|||+ .+ ++||||+|+||++++++.++|+|||++...
T Consensus 80 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~~-----~~H~~l~~~ni~~~~~~~~~l~df~~~~~~ 150 (264)
T cd06623 80 YMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKRH-----IIHRDIKPSNLLINSKGEVKIADFGISKVL 150 (264)
T ss_pred ecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccCC-----CccCCCCHHHEEECCCCCEEEccCccceec
Confidence 99999999999764 248999999999999999999999 87 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH-
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES- 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 646 (689)
....... ....++..|+|||.+.+..++.++||||||+++|||+||+.|+....+. ........+.. ......+..
T Consensus 151 ~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 227 (264)
T cd06623 151 ENTLDQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-SFFELMQAICD-GPPPSLPAEE 227 (264)
T ss_pred ccCCCcc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-CHHHHHHHHhc-CCCCCCCccc
Confidence 5432211 1234567899999999888999999999999999999999998654310 00111111111 111222333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.+..+.+++..|++.+|++||++.|++++-+
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~ 258 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQHPF 258 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhCHH
Confidence 5678999999999999999999999998743
No 271
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.8e-36 Score=333.11 Aligned_cols=261 Identities=17% Similarity=0.235 Sum_probs=194.9
Q ss_pred HHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCC------CcceeEeeE
Q 005586 402 EEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH------ENIIRLRGF 474 (689)
Q Consensus 402 ~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H------~niv~l~g~ 474 (689)
+++...+++|...+.||+|+||.||+|... .++.||||+++... ....++..|++++.+++| .+++.++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 344456788999999999999999999875 68899999996432 223345567777666654 458899988
Q ss_pred EEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCCceeecCC
Q 005586 475 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQ 553 (689)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~NiLl~~~ 553 (689)
+... ....++|||++ +++|.+++.... .+++..+..|+.||+.||+|||+ .+ ||||||||+|||++.+
T Consensus 200 ~~~~-~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~g-----IiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 200 FQNE-TGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHTELH-----LMHTDLKPENILMETS 268 (467)
T ss_pred EEcC-CceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcCC-----eecCCCCHHHEEEecC
Confidence 8543 45789999998 778999887643 48999999999999999999997 46 9999999999999876
Q ss_pred C----------------CeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 005586 554 F----------------NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLV 617 (689)
Q Consensus 554 ~----------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p 617 (689)
+ .+||+|||.+...... .....+|..|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHS----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccc----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 5 4999999987643221 2234578899999999999999999999999999999999999
Q ss_pred cchhHHHHHhhh-------------------hhhHhhccc--cCCCCC---------------HHHHHHHHHHHHHhccC
Q 005586 618 LTSSMRLAAESA-------------------TFENFIDRN--LKGKFS---------------ESEAAKLGKMALVCTHE 661 (689)
Q Consensus 618 ~~~~~~~~~~~~-------------------~~~~~~~~~--~~~~~~---------------~~~~~~l~~l~~~Cl~~ 661 (689)
|........... ...++.+.. +..... ......+.+++..|++.
T Consensus 345 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 424 (467)
T PTZ00284 345 YDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY 424 (467)
T ss_pred CCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc
Confidence 964321110000 000011100 000000 01234577999999999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 005586 662 DPENRPTMEAVIEELTVA 679 (689)
Q Consensus 662 dp~~RPs~~evl~~L~~~ 679 (689)
||++|||++|+++|-+..
T Consensus 425 dP~~R~ta~e~L~Hp~~~ 442 (467)
T PTZ00284 425 DRQKRLNARQMTTHPYVL 442 (467)
T ss_pred ChhhCCCHHHHhcCcccc
Confidence 999999999999986654
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.6e-36 Score=307.86 Aligned_cols=253 Identities=21% Similarity=0.419 Sum_probs=201.9
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC---CCcceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR---HENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~~~l 485 (689)
.|+..+.||+|+||.||+|... ++..||+|.+..........++.+|++++++++ |||++++++++.. ....++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~--~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK--GPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee--CCEEEE
Confidence 3666789999999999999974 789999999876554455667889999999997 9999999998854 467899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++++|.+++... .+++...+.++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~~-----i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKVG-----VIHRDIKAANILVTNTGNVKLCDFGVAA 149 (277)
T ss_pred EEecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCcCHHHEEEcCCCCEEEccCCcee
Confidence 99999999999998643 4899999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
.+..... ......++..|+|||.+.++ .++.++|||||||++|||++|+.|+........ .. .+........+
T Consensus 150 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----~~-~~~~~~~~~~~ 223 (277)
T cd06917 150 LLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA----MM-LIPKSKPPRLE 223 (277)
T ss_pred ecCCCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh----hh-ccccCCCCCCC
Confidence 7654331 12233577789999988654 468999999999999999999999964322111 00 00011111111
Q ss_pred H-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 645 E-SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 645 ~-~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
. ..+.++.+++.+|++.||++||++.|++++-+...
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 224 DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 1 24567899999999999999999999998765543
No 273
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.7e-36 Score=303.43 Aligned_cols=250 Identities=22% Similarity=0.397 Sum_probs=201.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||++... ++..+|+|++..... ......+.+|++++++++|||++++++.+.. .+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 4677889999999999999875 688999999876532 3345689999999999999999999998743 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-CCeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~kl~DfGla~~ 566 (689)
||+++++|.+++..... ..+++..+..++.+++.||+|||+.+ |+||||||+||+++++ +.+||+|||+++.
T Consensus 79 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 79 EYAPGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVHTKL-----ILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred ecCCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 99999999999976432 34899999999999999999999987 9999999999999865 4689999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
...... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ...... ......+..
T Consensus 152 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~ 224 (256)
T cd08220 152 LSSKSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL----VLKIMS-GTFAPISDR 224 (256)
T ss_pred cCCCcc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH----HHHHHh-cCCCCCCCC
Confidence 654321 1123467789999999888899999999999999999999999865322111 111111 111123334
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....+.+++..||+.+|++||++.|++++
T Consensus 225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 225 YSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 56679999999999999999999999876
No 274
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.1e-36 Score=310.05 Aligned_cols=257 Identities=20% Similarity=0.336 Sum_probs=195.4
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++++|...+.||+|+||.||+|... +|..||+|++...........+.+|+.++++++|+||+++.+++.. .+..++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEE
Confidence 4567888999999999999999875 6899999999765434444567899999999999999999999854 467899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 81 v~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~-----i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIHGQH-----ILHRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred EEeccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCChHHEEEcCCCcEEEecccccc
Confidence 999995 78877775432 23788888999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh------------
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE------------ 632 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~------------ 632 (689)
....... ......++..|+|||.+.+. .++.++|||||||++|||+||+.||..............
T Consensus 152 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 152 AKSIPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred ccCCCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 6533211 11223457789999998754 578899999999999999999999864322111000000
Q ss_pred ------HhhccccCCCCC---------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 633 ------NFIDRNLKGKFS---------ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 633 ------~~~~~~~~~~~~---------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...........+ ......+.+++.+|++.||++|||+.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000 0124578899999999999999999999875
No 275
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=315.23 Aligned_cols=256 Identities=20% Similarity=0.329 Sum_probs=214.7
Q ss_pred hccCCcccccccCCcceEEEEEecC-CcEEEEEEecccCCch--HHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKS--EEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~--~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~ 483 (689)
.+.|...+.||+|.||.||+++.+. |+.+|+|.+.+..... ......+|+.+|+++. |||||.+.+.+ +.....
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~--e~~~~~ 111 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF--EDPDSV 111 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE--EcCCeE
Confidence 3456777899999999999999874 9999999998766433 3468899999999998 99999999999 445789
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC----CCeEEe
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ----FNPLIA 559 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~----~~~kl~ 559 (689)
++|||++.+|.|.+.+... . +++.....++.|++.++.|||+.+ |+||||||+|+|+... +.+|++
T Consensus 112 ~lvmEL~~GGeLfd~i~~~----~-~sE~da~~~~~~il~av~~lH~~g-----vvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK----H-YSERDAAGIIRQILEAVKYLHSLG-----VVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred EEEEEecCCchHHHHHHHc----c-CCHHHHHHHHHHHHHHHHHHHhCC-----ceeccCCHHHeeeccccCCCCcEEEe
Confidence 9999999999999999765 1 889999999999999999999988 9999999999999743 479999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc--
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-- 637 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-- 637 (689)
|||+++..... .......||+.|+|||++....|+.++||||.||++|.|++|..||........ +..+...
T Consensus 182 DFGla~~~~~~--~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~----~~~i~~~~~ 255 (382)
T KOG0032|consen 182 DFGLAKFIKPG--ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI----FLAILRGDF 255 (382)
T ss_pred eCCCceEccCC--ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH----HHHHHcCCC
Confidence 99999988763 244567799999999999999999999999999999999999999976543222 1222222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
..........+..+.+++..|+..||.+|+++.++++|.|....
T Consensus 256 ~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 256 DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 22333445668889999999999999999999999999775544
No 276
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.7e-35 Score=310.23 Aligned_cols=252 Identities=21% Similarity=0.373 Sum_probs=199.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
+.|...+.||+|+||.||+|... +|+.||+|++..... ....+++.+|++++++++||||+++.++|.. .+..++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~l 92 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR--EHTAWL 92 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--CCeEEE
Confidence 45777889999999999999875 689999999865432 2334678999999999999999999999954 467899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||+++
T Consensus 93 v~e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH~~~-----i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 93 VMEYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLHSHE-----RIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred EHHhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCcccEEECCCCCEEEeecCcce
Confidence 999996 67877776433 24899999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
...... ...++..|+|||++. ...++.++||||||+++|||+||+.|+......... ...........
T Consensus 164 ~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~ 234 (307)
T cd06607 164 LVSPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTL 234 (307)
T ss_pred ecCCCC-----CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH----HHHhcCCCCCC
Confidence 654321 234667899999874 456889999999999999999999998643221110 01111111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.....+..+.+++.+||+.+|++||+|.+++++.+...
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 12345678999999999999999999999998866543
No 277
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.4e-36 Score=320.59 Aligned_cols=258 Identities=18% Similarity=0.290 Sum_probs=197.8
Q ss_pred HHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---- 479 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~---- 479 (689)
...++|...+.||+|+||.||+|... ++..||||++..... ......+.+|++++.+++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578889999999999999999864 688999999875432 223456789999999999999999998774321
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
....++++|++ +++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHSAG-----IIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecccCChhhEEECCCCCEEEc
Confidence 24578999998 78999887542 3899999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh-------
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF------- 631 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~------- 631 (689)
|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 161 Dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07878 161 DFGLARQADDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236 (343)
T ss_pred CCccceecCCCc----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999998765432 23357788999999876 568999999999999999999999985422110000000
Q ss_pred hHhhc-----------cccCCCCCH--------HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 632 ENFID-----------RNLKGKFSE--------SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 632 ~~~~~-----------~~~~~~~~~--------~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+... ..+ ...+. .....+.+++.+|++.||++|||+.|++++-+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~ 302 (343)
T cd07878 237 PEVLKKISSEHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS 302 (343)
T ss_pred HHHHHhcchhhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 00000 000 00010 1233578999999999999999999999886554
No 278
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.7e-36 Score=311.28 Aligned_cols=256 Identities=20% Similarity=0.378 Sum_probs=196.2
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||++... +|+.||+|++...........+.+|+.++.++. |+||+++++++.. ....+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~--~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR--EGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--CCcEEEEE
Confidence 3445678999999999999875 689999999986654455678999999999996 9999999998854 46788999
Q ss_pred EcCCCCCHHHHhhhc-CCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 488 DFAPKGKLSKYLDQE-EGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 488 e~~~~gsL~~~L~~~-~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||++ +++.++.... ......+++....+++.+++.||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-----i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-----IIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-----eeccCCCHHHEEEccCCcEEEeecchhH
Confidence 9986 4555543211 01123589999999999999999999974 4 9999999999999999999999999997
Q ss_pred cccCCceeeeecCCCCCCCCCccccccC---CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh---cccc
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTG---RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI---DRNL 639 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~---~~~~ 639 (689)
....... .....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ..+.+.. .+.+
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~ 231 (288)
T cd06616 157 QLVDSIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF---DQLTQVVKGDPPIL 231 (288)
T ss_pred HhccCCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH---HHHhhhcCCCCCcC
Confidence 6543321 1223467789999998766 68999999999999999999999986432111 1111111 1112
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
........+.++.+++.+|++.+|++||++.||+++-+.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~ 270 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI 270 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 222223356789999999999999999999999987543
No 279
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-35 Score=307.82 Aligned_cols=256 Identities=18% Similarity=0.305 Sum_probs=197.0
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..... ....+.|.+|++++.+++|+|++++++++.. ....++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 35777889999999999999986 689999999875432 2233568899999999999999999999854 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++++|..++.... .++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++..
T Consensus 79 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 79 FEYCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKHN-----CIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred EeccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCChhhEEEcCCCcEEECcccccee
Confidence 99999998888765432 3899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh---hhhh-------Hhh
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES---ATFE-------NFI 635 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~---~~~~-------~~~ 635 (689)
...... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||.......... .... +..
T Consensus 150 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 150 LTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred cCCCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 654321 1112345677999999865 457899999999999999999999986432111100 0000 000
Q ss_pred cc----------ccCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 DR----------NLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ~~----------~~~~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+. ......+ ......+.+++.+|++.+|++||++.|++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~ 284 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP 284 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence 00 0000000 12246788999999999999999999998763
No 280
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.4e-36 Score=309.74 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=200.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.++++++||||+++++++.. ....++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 3667789999999999999975 689999999976543 2334679999999999999999999999854 57889999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+ +++|.+++.... ..+++.++..++.|+++||+|||+.+ ++|+||||+||++++++.++|+|||++...
T Consensus 79 e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 79 EYM-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHANG-----IMHRDLKPANLLISADGVLKIADFGLARLF 149 (286)
T ss_pred ccc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence 999 999999987643 34899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh-----------h
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF-----------I 635 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~-----------~ 635 (689)
............++..|+|||.+.+. .++.++||||+|+++|||+||+.|+...............+ .
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred cCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 54332122234577889999998654 46899999999999999999988775432211111100000 0
Q ss_pred ---c--c-ccCC-------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 ---D--R-NLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ---~--~-~~~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+ . .... ....+....+.+++.+|++.+|++||++++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0 0 0000 00112357889999999999999999999999874
No 281
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.9e-36 Score=312.58 Aligned_cols=253 Identities=15% Similarity=0.302 Sum_probs=200.1
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
...||+|+||.||+|... +++.||+|.+.... ......+.+|+.++..++||||+++++++.. .+..++|+||+++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv~e~~~~ 102 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVLMEFLQG 102 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEEEecCCC
Confidence 457999999999999875 68999999987654 2345678899999999999999999998854 4789999999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 572 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 572 (689)
++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 103 ~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~-----ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 103 GALTDIVSQT-----RLNEEQIATVCESVLQALCYLHSQG-----VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 9999987542 3889999999999999999999987 99999999999999999999999999876543321
Q ss_pred eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHH
Q 005586 573 FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 652 (689)
Q Consensus 573 ~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 652 (689)
......++..|+|||++.+..++.++|||||||++|||++|+.||......... ..+...... ...........+.
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~l~ 248 (297)
T cd06659 173 -KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRDSPPP--KLKNAHKISPVLR 248 (297)
T ss_pred -cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhccCCC--CccccCCCCHHHH
Confidence 112234678899999998888999999999999999999999998643211110 011100000 0111222345688
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHhhCCcc
Q 005586 653 KMALVCTHEDPENRPTMEAVIEELTVAAPVM 683 (689)
Q Consensus 653 ~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~ 683 (689)
+++..|++.+|++||++.+++++-.......
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 9999999999999999999999866655443
No 282
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8.8e-36 Score=308.82 Aligned_cols=254 Identities=15% Similarity=0.321 Sum_probs=201.4
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|...+.||+|++|.||++... +++.|++|++.... ....+.+.+|+.++.+++||||+++++++.. .+..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEEe
Confidence 3555679999999999999864 78999999986543 3345678899999999999999999998854 578899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 97 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~ 166 (285)
T cd06648 97 FLEGGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQG-----VIHRDIKSDSILLTSDGRVKLSDFGFCAQVS 166 (285)
T ss_pred ccCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCChhhEEEcCCCcEEEcccccchhhc
Confidence 99999999998762 3889999999999999999999987 9999999999999999999999999887654
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.... ......++..|+|||...+..++.++|||||||++|||++|+.|+......... ..+.....+... ......
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~ 242 (285)
T cd06648 167 KEVP-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM-KRIRDNLPPKLK--NLHKVS 242 (285)
T ss_pred cCCc-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH-HHHHhcCCCCCc--ccccCC
Confidence 3321 112234678899999998888999999999999999999999998643221111 111111111111 112245
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 649 AKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
..+.+++.+||+.+|++||++.+++++-....
T Consensus 243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 243 PRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 67999999999999999999999998755443
No 283
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=287.79 Aligned_cols=255 Identities=24% Similarity=0.373 Sum_probs=205.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-------hHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-------SEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 479 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-------~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~ 479 (689)
+.|...+.||.|..++|-++..+ +|.+.|+|++...... .-..+-.+|+.+|+++ .||+|+.+.++| +.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y--es 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY--ES 94 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec--cC
Confidence 45666789999999999999875 6889999999754321 1123456789999998 699999999998 55
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
+...++|+|.|+.|-|.++|...- .+++..-.+|+.|+.+|++|||... ||||||||+|||+|++.++||+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa~~-----IVHRDLKpENILlddn~~i~is 165 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHARN-----IVHRDLKPENILLDDNMNIKIS 165 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHHhh-----hhhcccChhheeeccccceEEe
Confidence 678999999999999999998654 4888999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCccccc------cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT------TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~ 633 (689)
|||++..+..+. ......||+||.|||.+. ...|+..+|.|+.||+||-|+.|.+||...........+++.
T Consensus 166 DFGFa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 166 DFGFACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred ccceeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 999999887654 334567999999999874 245889999999999999999999999654332222111111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
- -.++..-..+.+....+++.+|++.||++|.|.+|++.+...
T Consensus 244 k--yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 244 K--YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred c--cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 0 011222234567789999999999999999999999988655
No 284
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.6e-36 Score=311.73 Aligned_cols=253 Identities=18% Similarity=0.268 Sum_probs=196.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||++..+ +++.||+|.+..... ......+.+|++++..++||||+++++.+.. .+..++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEE
Confidence 36778899999999999999976 578999999876532 2334578899999999999999999998843 568899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 79 v~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 79 VMEYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNYG-----IVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred EEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 999999999999997643 4889999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCce--------------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh
Q 005586 566 LLADDIV--------------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 631 (689)
Q Consensus 566 ~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~ 631 (689)
....... .......++..|+|||++....++.++|||||||++|||++|+.||........ .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~----~ 225 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL----F 225 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----H
Confidence 4211100 001112456789999999888899999999999999999999999864322111 1
Q ss_pred hHhhccccC-CCCCHHHHHHHHHHHHHhccCCCCCCCCH---HHHHHHH
Q 005586 632 ENFIDRNLK-GKFSESEAAKLGKMALVCTHEDPENRPTM---EAVIEEL 676 (689)
Q Consensus 632 ~~~~~~~~~-~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~---~evl~~L 676 (689)
......... .......+.++.+++.+||+.+|++||++ .+++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 226 GQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 111111110 01111345678999999999999999985 5555543
No 285
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-35 Score=318.24 Aligned_cols=252 Identities=17% Similarity=0.259 Sum_probs=190.9
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
...+|...+.||+|+||.||+|... ++..||+|..... ....|+.++++++||||+++++++.. ....++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVS--GAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEe--CCeeEE
Confidence 3457999999999999999999976 5788999975432 23468999999999999999999855 467899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+||+ .|+|.+++.... ..++|..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 135 v~e~~-~~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLHAQR-----IIHRDVKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred EEEcc-CCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEEecCcccc
Confidence 99999 578999887543 34899999999999999999999987 9999999999999999999999999997
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhH------HHHHhhhhhhHhh----
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSM------RLAAESATFENFI---- 635 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~------~~~~~~~~~~~~~---- 635 (689)
...... ......+|..|+|||++.+..++.++|||||||++|||+++..|+.... ........+.+++
T Consensus 206 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~ 283 (357)
T PHA03209 206 FPVVAP--AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLK 283 (357)
T ss_pred ccccCc--ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 543321 1223457889999999999999999999999999999999665542110 0000000011100
Q ss_pred -------------------ccccC--CCCC-------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 636 -------------------DRNLK--GKFS-------ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 636 -------------------~~~~~--~~~~-------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.... .... ......+.+++..||+.||++|||+.||+++-+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f 354 (357)
T PHA03209 284 VHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMF 354 (357)
T ss_pred cChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchh
Confidence 00000 0000 0113345679999999999999999999987543
No 286
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.1e-35 Score=313.05 Aligned_cols=255 Identities=20% Similarity=0.291 Sum_probs=203.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|... +++.||+|.+...... ...+.+..|++++..++|+||+++++++. .....++|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv 79 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--TETYLCLV 79 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee--cCCEEEEE
Confidence 5778899999999999999976 5899999999865433 24567899999999999999999999884 35789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++..
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 152 (316)
T cd05574 80 MDYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLLG-----IVYRDLKPENILLHESGHIMLSDFDLSKQ 152 (316)
T ss_pred EEecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCChHHeEEcCCCCEEEeecchhhc
Confidence 99999999999987543 235899999999999999999999987 99999999999999999999999999875
Q ss_pred ccCCcee----------------------------eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCc
Q 005586 567 LADDIVF----------------------------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVL 618 (689)
Q Consensus 567 ~~~~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~ 618 (689)
....... ......++..|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf 232 (316)
T cd05574 153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF 232 (316)
T ss_pred ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCC
Confidence 5322100 001124677899999999888999999999999999999999999
Q ss_pred chhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC----HHHHHHHHH
Q 005586 619 TSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPT----MEAVIEELT 677 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs----~~evl~~L~ 677 (689)
...... ..+.++.+...........+..+.+++.+|++.||++||+ +.|++.+-+
T Consensus 233 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~ 291 (316)
T cd05574 233 KGSNRD----ETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291 (316)
T ss_pred CCCchH----HHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCch
Confidence 644222 1222233222221112225678999999999999999999 777777643
No 287
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=315.16 Aligned_cols=257 Identities=22% Similarity=0.377 Sum_probs=209.5
Q ss_pred cCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchH--HHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~--~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.|+..+.||.|+||.||-|+. ++...||||++.-...... -+++.+|+++|.+++|||++.+.|+|..+ ...++|
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre--~TaWLV 104 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE--HTAWLV 104 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc--chHHHH
Confidence 466778899999999999986 4788999999976543322 26899999999999999999999988654 568999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||| -||-.++|.-.. .++...++-.|..|++.||+|||+.+ .||||||+-||||++.|.||++|||.+..
T Consensus 105 MEYC-lGSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLHS~~-----~IHRDiKAGNILLse~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 105 MEYC-LGSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSHN-----RIHRDIKAGNILLSEPGLVKLADFGSASI 175 (948)
T ss_pred HHHH-hccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHhh-----HHhhhccccceEecCCCeeeeccccchhh
Confidence 9999 578888876543 35888899999999999999999988 89999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
+.+. ....||+.|||||++. .+.|+-|+||||+||.-.||.-.++|+....-..... .+.+--.|.+.
T Consensus 176 ~~PA-----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-HIAQNesPtLq--- 246 (948)
T KOG0577|consen 176 MAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPTLQ--- 246 (948)
T ss_pred cCch-----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-HHHhcCCCCCC---
Confidence 7643 3457999999999975 5789999999999999999999999985432211111 11111122332
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccccc
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATF 686 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~~~ 686 (689)
..+.+..+..++..|+++-|.+|||..+++++--..++++++-
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv 289 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV 289 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence 4567889999999999999999999999999987777776653
No 288
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-36 Score=319.58 Aligned_cols=243 Identities=20% Similarity=0.284 Sum_probs=187.1
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc---CCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL---RHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
||+|+||.||+|+.+ +|+.||+|++..... ......+..|..++.+. +||||+++++++.. ....++||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEEEEcCC
Confidence 799999999999876 689999999865421 12234556677777665 69999999998843 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++.... .+++.....++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 79 ~~g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~~~-----ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 79 SGGELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHKYD-----IVYRDLKPENILLDATGHIALCDFGLSKANLTD 149 (330)
T ss_pred CCChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCCHHHeEECCCCCEEEecCCcCcCCCCC
Confidence 9999999987543 3889999999999999999999987 999999999999999999999999998754322
Q ss_pred ceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC-HHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-ESEA 648 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 648 (689)
.. ......||..|+|||.+.+. .++.++|||||||++|||+||+.||........ +..+..... .++ ....
T Consensus 150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~--~~~~~~~~ 222 (330)
T cd05586 150 NK-TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM----YRNIAFGKV--RFPKNVLS 222 (330)
T ss_pred CC-CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH----HHHHHcCCC--CCCCccCC
Confidence 11 12234578899999998764 479999999999999999999999865322111 111111111 111 1235
Q ss_pred HHHHHHHHHhccCCCCCCC----CHHHHHHHHH
Q 005586 649 AKLGKMALVCTHEDPENRP----TMEAVIEELT 677 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RP----s~~evl~~L~ 677 (689)
.++.+++.+|++.||++|| ++.|++++.+
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence 6788999999999999998 5777776543
No 289
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.4e-36 Score=311.61 Aligned_cols=255 Identities=18% Similarity=0.332 Sum_probs=194.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||+|... +|..||+|++...... .....+.+|++++++++||||+++++++.+ ....++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS--DKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc--CCceEEEE
Confidence 3667789999999999999975 6899999998754322 223567889999999999999999998843 56899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++..... .+++.....++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 79 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~-----i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 79 EYCD-QDLKKYFDSCNG---DIDPEIVKSFMFQLLKGLAFCHSHN-----VLHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred ecCC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 9996 588888765432 4899999999999999999999987 999999999999999999999999999865
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh---------------h
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT---------------F 631 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~---------------~ 631 (689)
..... ......++..|+|||.+.+. .++.++|||||||++|||+||+.|+............ .
T Consensus 150 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 150 GIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred CCCCC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 43221 11223457789999988764 4689999999999999999999886322111000000 0
Q ss_pred hHhhccccCCCC---------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 632 ENFIDRNLKGKF---------SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 632 ~~~~~~~~~~~~---------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+..+......+ ....+.++.+++.+|++.||++|||+.|++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 000110000001 112356788999999999999999999998764
No 290
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.5e-36 Score=310.06 Aligned_cols=255 Identities=20% Similarity=0.367 Sum_probs=198.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|+||.||+|..+ +++.||+|+++.... ......+.+|++++++++|+||+++++++.. .+..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEEE
Confidence 5778899999999999999986 588999999876432 2334678999999999999999999999854 56899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++++.+..+.... ..+++.....++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++...
T Consensus 80 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~ 150 (288)
T cd07833 80 EYVERTLLELLEASP----GGLPPDAVRSYIWQLLQAIAYCHSHN-----IIHRDIKPENILVSESGVLKLCDFGFARAL 150 (288)
T ss_pred ecCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEECCCCCEEEEeeeccccc
Confidence 999987777665432 23889999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------hhHhh-
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT----------FENFI- 635 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~----------~~~~~- 635 (689)
............++..|+|||++.+. .++.++||||||+++|||++|+.|+............ .....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 55432122233456789999999887 7899999999999999999999988643211100000 00000
Q ss_pred -ccccC--------------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 636 -DRNLK--------------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 636 -~~~~~--------------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
++... ..++...+.++.+++..||..+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 01122236789999999999999999999999875
No 291
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.1e-35 Score=302.87 Aligned_cols=255 Identities=22% Similarity=0.365 Sum_probs=201.6
Q ss_pred cCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCc-----hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCK-----SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
+|+..+.||+|+||.||+|.. .++..||+|.+...... .....+.+|++.+++++|+||+++++++. ..+..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC--EDSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec--cCCeE
Confidence 366778999999999999986 47899999998754321 13468899999999999999999999984 35788
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeEEeccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCG 562 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl~DfG 562 (689)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++ .+||+|||
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~~-----i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHENQ-----IIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred EEEEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEEcccc
Confidence 99999999999999997543 4889999999999999999999987 99999999999998776 58999999
Q ss_pred ccccccCCceee---eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 563 LHKLLADDIVFS---VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 563 la~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
.+..+....... .....++..|+|||.+.+..++.++||||+|+++|||++|+.|+........ .....+......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~ 228 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFKIASATT 228 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHHHhccCC
Confidence 988765431110 1123467789999999888899999999999999999999999853221110 011111111122
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
....+.....++.+++.+|+..+|++||++.|++++-
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~ 265 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence 2344555677899999999999999999999998753
No 292
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-35 Score=322.22 Aligned_cols=254 Identities=16% Similarity=0.254 Sum_probs=196.9
Q ss_pred hccCCcccccccCCcceEEEEEec---CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
..+|...+.||+|+||.||++... .+..||+|.+.... .+.+|++++++++|||||++++++.. ....+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRW--KSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEee--CCEEE
Confidence 356888999999999999999754 36789999876432 35689999999999999999998843 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+. ++|.+++... ..++|.+++.|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 163 lv~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH~~g-----ivHrDlkp~Nill~~~~~~~l~DfG~a 232 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLHGRG-----IIHRDVKTENIFLDEPENAVLGDFGAA 232 (392)
T ss_pred EEehhcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEEcCCCCEEEccCccc
Confidence 9999995 6899888432 24899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHH---HHhhh-----------
Q 005586 565 KLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL---AAESA----------- 629 (689)
Q Consensus 565 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~---~~~~~----------- 629 (689)
+........ ......+|..|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 233 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~ 312 (392)
T PHA03207 233 CKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE 312 (392)
T ss_pred cccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc
Confidence 866543221 122346889999999999889999999999999999999999998542110 00000
Q ss_pred -----------hhhHhhccccCCCCC-------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 630 -----------TFENFIDRNLKGKFS-------ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 630 -----------~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
.+.++ ....+..+. .....++.+++.+|+..||++||++.|++.+-+...
T Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 313 FPQNGSTNLCKHFKQY-AIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred cCCccchhHHHHHHhh-cccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 00000 000111111 012346778999999999999999999999977654
No 293
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.8e-35 Score=308.14 Aligned_cols=254 Identities=19% Similarity=0.368 Sum_probs=200.9
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|...+.||+|+||.||+|... +|..||+|++..... .....++.+|++++++++|||++++++++.. ....++||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 104 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR--EHTAWLVM 104 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--CCeEEEEE
Confidence 556788999999999999975 689999999875432 2334578999999999999999999999854 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ |+|.+.+.... ..++|.++..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++...
T Consensus 105 e~~~-g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~ 175 (317)
T cd06635 105 EYCL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSHN-----MIHRDIKAGNILLTEPGQVKLADFGSASIA 175 (317)
T ss_pred eCCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCcccEEECCCCCEEEecCCCcccc
Confidence 9996 58888876443 24899999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
... ....++..|+|||++. .+.++.++|||||||++|||++|+.|+........ ...+..........
T Consensus 176 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 246 (317)
T cd06635 176 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPTLQS 246 (317)
T ss_pred CCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhccCCCCCC
Confidence 432 1234677899999974 45689999999999999999999999854321111 11111111111222
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCccc
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 684 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~~ 684 (689)
......+.+++.+|++.+|++||++.+|++++........
T Consensus 247 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 247 NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 3456678999999999999999999999998877665543
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.3e-35 Score=308.75 Aligned_cols=257 Identities=17% Similarity=0.332 Sum_probs=198.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+.||+|+||.||+|..+ +++.+|+|.++..... .....+.+|+.++.+++||||+++++++........++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35777889999999999999986 6899999999755422 223467789999999999999999999866555789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||++ ++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~-----i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHDNW-----ILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCCHHHEEECCCCcEEEeecCceee
Confidence 99997 599999876432 4899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-------------
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE------------- 632 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~------------- 632 (689)
...... ......++..|+|||.+.+. .++.++|+||||+++|||++|+.|+..............
T Consensus 156 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 156 YGSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred ccCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Confidence 654321 11223456789999988654 468999999999999999999999864322111100000
Q ss_pred -H-----------hhccccCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 633 -N-----------FIDRNLKGKFSES-EAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 633 -~-----------~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+ .....+...++.. ....+.+++..|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 0000011112221 35678899999999999999999999875
No 295
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-38 Score=299.28 Aligned_cols=249 Identities=20% Similarity=0.356 Sum_probs=209.0
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
|...++||+|+||.||+|.++ .|..||||.+.... +.+++.+|+.+|++.+.|++|++||-|.. ...+++||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK--~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFK--HSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhcc--CCceEeehhh
Confidence 445689999999999999987 69999999988753 56789999999999999999999997743 4679999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
|-.|+..+.++..+ .+|.+.+.-.|....++||+|||... -||||||+-||||+.+|.+|++|||.+..+.+
T Consensus 110 CGAGSiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH~~~-----KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 110 CGAGSISDIMRARR---KPLSEQEISAVLRDTLKGLQYLHDLK-----KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred cCCCcHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHHHHH-----HHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 99999999998654 46999999999999999999999876 69999999999999999999999999988765
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
.. .....+.||+.|||||++..-.|..++||||+|+...||..|++|+.+-... ...+.--..+.-.-..++..+.
T Consensus 182 TM-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMIPT~PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 182 TM-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMIPTKPPPTFKKPEEWSS 257 (502)
T ss_pred hH-HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---ceeEeccCCCCCCCCChHhhhh
Confidence 32 2344567999999999999999999999999999999999999999653211 1111111111112234678899
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 650 KLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++.+++..|+.+.|++|-|+-+++++-
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 999999999999999999999998874
No 296
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-35 Score=307.08 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=202.1
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|++++++++||||+++++++.. ....++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEE
Confidence 35778899999999999999976 689999999875432 2334678899999999999999999998854 477899
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||+++
T Consensus 79 v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~~~-----i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 79 VMEYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHSLD-----IVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred EEecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 999999999999997653 4889999999999999999999987 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
..... .....++..|+|||.+.+...+.++||||||+++|||++|+.|+....... ........ ...++.
T Consensus 150 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~--~~~~~~ 219 (290)
T cd05580 150 RVKGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ----IYEKILEG--KVRFPS 219 (290)
T ss_pred ccCCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcC--CccCCc
Confidence 76543 123356788999999988888999999999999999999999986543211 11111111 112334
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHH
Q 005586 646 SEAAKLGKMALVCTHEDPENRP-----TMEAVIEEL 676 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L 676 (689)
.....+.+++.+||+.+|.+|| +.+|++++-
T Consensus 220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 4467889999999999999999 778887654
No 297
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-35 Score=307.87 Aligned_cols=255 Identities=20% Similarity=0.378 Sum_probs=194.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++. +.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--TENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc--cCCcEEEEe
Confidence 4777889999999999999875 689999999875432 223357889999999999999999999984 457899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++ ++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++..
T Consensus 79 e~~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~-----i~H~~l~p~nill~~~~~~~l~dfg~~~~~ 150 (284)
T cd07860 79 EFLH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAF 150 (284)
T ss_pred eccc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence 9995 689999876432 35899999999999999999999887 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCC-CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh--------------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-------------- 632 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~-------------- 632 (689)
..... ......++..|+|||.+.+.. ++.++|||||||++|||+||+.||..............
T Consensus 151 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 151 GVPVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ccCcc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 43211 112223567899999887644 58899999999999999999999854321111000000
Q ss_pred Hh---hcc--ccCCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 633 NF---IDR--NLKGK----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 633 ~~---~~~--~~~~~----~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.. ... ..... .......++.+++.+|++.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00 000 00000 001124567899999999999999999999876
No 298
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.8e-35 Score=307.73 Aligned_cols=252 Identities=16% Similarity=0.315 Sum_probs=201.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|||++++++++.. .+..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLV--GDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeee--CCcEEEEE
Confidence 46777899999999999999864 68899999986543 3344678999999999999999999999854 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 96 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~g-----i~H~dL~p~Nili~~~~~~kL~dfg~~~~~ 165 (293)
T cd06647 96 EYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ-----VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (293)
T ss_pred ecCCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----EeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence 999999999999753 3789999999999999999999987 999999999999999999999999998765
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||.+....++.++|||||||++||+++|+.||.......... ... .........+...
T Consensus 166 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 241 (293)
T cd06647 166 TPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIA--TNGTPELQNPEKL 241 (293)
T ss_pred ccccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-ehh--cCCCCCCCCcccc
Confidence 43321 1122346778999999988889999999999999999999999996432211100 000 0011111112334
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
...+.+++..||+.+|++||++.+++.+-.
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h~~ 271 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 567889999999999999999999998843
No 299
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.6e-35 Score=308.80 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=198.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc----hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK----SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||+|... +|+.||+|++...... .....+..|++++.+++|+||+++++++.. .+..+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 3667789999999999999975 6899999999765432 123567789999999999999999999955 57899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+ +|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 79 lv~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~-----i~H~dl~p~nill~~~~~~~l~dfg~~ 149 (298)
T cd07841 79 LVFEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSNW-----ILHRDLKPNNLLIASDGVLKLADFGLA 149 (298)
T ss_pred EEEccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeecCCChhhEEEcCCCCEEEccceee
Confidence 999999 999999997643 24899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH----------
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN---------- 633 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~---------- 633 (689)
+....... ......++..|+|||.+.+ ..++.++|||||||++|||++|..|+...............
T Consensus 150 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 150 RSFGSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred eeccCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 87654321 1122235667999998854 45789999999999999999998777532221111111000
Q ss_pred -------hhccccCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 634 -------FIDRNLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 634 -------~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.......... ......++.+++.+|++.||++||++.|++++-+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 0000000001 122356789999999999999999999999985544
No 300
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-35 Score=300.51 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=206.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|+||.||++..+ ++..+|+|++..... .....++.+|++++++++|+||+++++++.. ....++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD--GNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CCEEEEEe
Confidence 4667789999999999999865 788999999876432 3345678899999999999999999998854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.........+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+|++|||+++..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-----i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-----ILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 999999999999764333346899999999999999999999987 999999999999999999999999999877
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
.... .....++..|+|||...+..++.++|+||||+++|||++|+.|+....... +...+........+...
T Consensus 154 ~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 225 (256)
T cd08530 154 KKNM---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-----LRYKVQRGKYPPIPPIY 225 (256)
T ss_pred ccCC---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHhcCCCCCCchhh
Confidence 5541 122346778999999998889999999999999999999999986432211 11112222222344566
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..++.+++..|++.+|++||++.|++++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 226 SQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 7789999999999999999999999876
No 301
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.8e-35 Score=301.28 Aligned_cols=252 Identities=18% Similarity=0.372 Sum_probs=201.2
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||+|..+ +|..||+|.+..... ......+.+|++++++++|+||+++++++. .....++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~--~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ--ENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec--cCCeEEEEE
Confidence 4677889999999999999986 588999999876432 234467889999999999999999999884 357899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl~DfGla~~ 566 (689)
||+++++|.+++..... ..++|..+..++.|++.||+|||+.+ ++|+||||+||++++++ .+||+|||.+..
T Consensus 79 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~-----i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 79 EYCDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDRK-----ILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred ecCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCCHHHEEEcCCCCeEEecccccchh
Confidence 99999999999976432 34899999999999999999999987 99999999999999885 469999999987
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
...... ......++..|+|||+..+..++.++|||||||++|||++|+.|+....... ...+...... ......
T Consensus 152 ~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~ 225 (257)
T cd08225 152 LNDSME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ----LVLKICQGYF-APISPN 225 (257)
T ss_pred ccCCcc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHhcccC-CCCCCC
Confidence 654321 1122346778999999988889999999999999999999999986432111 1122222111 112233
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
...++.+++.+|++.+|++||++.|++++.
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~ 255 (257)
T cd08225 226 FSRDLRSLISQLFKVSPRDRPSITSILKRP 255 (257)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhCC
Confidence 456799999999999999999999998763
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3e-35 Score=300.78 Aligned_cols=247 Identities=18% Similarity=0.278 Sum_probs=200.4
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||.|+||.||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++.+ ....++|+||++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD--KKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc--CCccEEEEecCCCC
Confidence 689999999999986 589999999976542 2345679999999999999999999998843 46789999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++......
T Consensus 79 ~L~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~~-----~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-- 147 (262)
T cd05572 79 ELWTILRDRG----LFDEYTARFYIACVVLAFEYLHNRG-----IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-- 147 (262)
T ss_pred cHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--
Confidence 9999997643 3889999999999999999999987 9999999999999999999999999998775432
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......++..|+|||.+.+..++.++|+||||+++|||++|+.|+....... ......+.+......++.....++.+
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAAKD 225 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHHHHHhccCCCCCCCcccCHHHHH
Confidence 1122346778999999988889999999999999999999999996543100 11122222222233444445778999
Q ss_pred HHHHhccCCCCCCCC-----HHHHHHHHHh
Q 005586 654 MALVCTHEDPENRPT-----MEAVIEELTV 678 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs-----~~evl~~L~~ 678 (689)
++..||+.+|++||+ ++|++++-+.
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 255 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhcChhh
Confidence 999999999999999 7888876553
No 303
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.5e-35 Score=299.32 Aligned_cols=253 Identities=19% Similarity=0.299 Sum_probs=202.8
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC----CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS----CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
++|...+.||+|+||.||+|... +|..||+|++.... .......|.+|++++++++|+||+++++++........
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 35778899999999999999875 68999999885431 12344688999999999999999999999866555678
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++|+||+++++|.+++.... .+++...+.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~~-----i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSNM-----IVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEEcCCCCEEECcccc
Confidence 89999999999999987543 3788999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 564 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 564 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
++....... .......++..|+|||++.+..++.++|||||||++|||++|+.||....... .+.+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~ 228 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKP 228 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCC
Confidence 986532111 01112346778999999988889999999999999999999999996532211 112222222233
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 642 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 642 ~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..+.....++.+++..|+. +|.+||+..+++.+
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 4556667789999999999 57999999998865
No 304
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.5e-35 Score=303.59 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=194.1
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|+||.||+|... +++.||+|+++............+|+..+.++. |+|++++++++.+...+..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 455688999999999999875 689999999876543333345567899999985 999999999997654478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|++ |+|.+++.... ..++|.++..++.|++.||+|||+.+ ++||||||+||++++ +.+||+|||+++...
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-----i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRNG-----IFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----ceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 996 68888887543 24899999999999999999999987 999999999999999 999999999998764
Q ss_pred CCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------hhHhhcc
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT----------FENFIDR 637 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~----------~~~~~~~ 637 (689)
..... ....++..|+|||++.. ..++.++|||||||++|||++|+.||............ ..+....
T Consensus 151 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 151 SKPPY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred cCCCc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 43211 12346778999997654 55789999999999999999999999643211100000 0000000
Q ss_pred cc--CCCC-----------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 638 NL--KGKF-----------SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 638 ~~--~~~~-----------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.- ...+ ....+..+.+++.+|++.+|++||++.+++++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~ 280 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence 00 0000 123467899999999999999999999999863
No 305
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=296.40 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=204.2
Q ss_pred CCcccccccCCcceEEEEEecC-CcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|...+.||+|.-|+||++++++ +..+|+|++.+... .....+...|-++|+.++||.++.||+.+ +.....++||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f--et~~~~cl~m 156 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF--ETDKYSCLVM 156 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--eccceeEEEE
Confidence 4446789999999999999974 68999999987643 23345667788999999999999999998 4568899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|||+||+|...++...+ ..++......+|.+|+-||+|||-.| ||.|||||+||||.++|++-|+||.|+...
T Consensus 157 eyCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLHmlG-----ivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLHMLG-----IVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred ecCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHHhhc-----eeeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999986543 45899999999999999999999998 999999999999999999999999997654
Q ss_pred cCCc-------------------------------e-e-----------------------eeecCCCCCCCCCcccccc
Q 005586 568 ADDI-------------------------------V-F-----------------------SVLKTSAAMGYLAPEYVTT 592 (689)
Q Consensus 568 ~~~~-------------------------------~-~-----------------------~~~~~~~~~~y~aPE~~~~ 592 (689)
.... . . ......||-.|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 2100 0 0 0001235667999999999
Q ss_pred CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC----
Q 005586 593 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPT---- 668 (689)
Q Consensus 593 ~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs---- 668 (689)
...+.++|+|+|||++|||+.|+.||-+..+. ..+..++-+.+.-......+..+.+|+..-+.+||.+|..
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~----~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK----ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCch----hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccc
Confidence 99999999999999999999999999765433 3445555544443223356788999999999999999998
Q ss_pred HHHHHHH
Q 005586 669 MEAVIEE 675 (689)
Q Consensus 669 ~~evl~~ 675 (689)
+.||-+|
T Consensus 386 A~eIK~H 392 (459)
T KOG0610|consen 386 AAEIKRH 392 (459)
T ss_pred hHHhhcC
Confidence 7777655
No 306
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.5e-35 Score=304.19 Aligned_cols=257 Identities=23% Similarity=0.415 Sum_probs=197.2
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|+||.||+|... +|+.+|+|++.... .......+.+|++++.+++|+|++++++++.....+..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456788999999999999976 58999999998764 2233457889999999999999999999986543478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++....
T Consensus 81 ~~~-~~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~~-----~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~ 151 (287)
T cd07840 81 YMD-HDLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSNG-----ILHRDIKGSNILINNDGVLKLADFGLARPYT 151 (287)
T ss_pred ccc-ccHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence 997 48998886542 24899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-----------Hhhc
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-----------NFID 636 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~-----------~~~~ 636 (689)
...........++..|+|||.+.+ ..++.++||||||+++|||+||+.|+.............. ...+
T Consensus 152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 152 KRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred CCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 443212223345677999997764 4578999999999999999999999864322111000000 0000
Q ss_pred ----cccC----------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 637 ----RNLK----------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 637 ----~~~~----------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.... ..+...++.++.+++..|++.+|++||++.+++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 0000 000111256789999999999999999999998753
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.2e-35 Score=302.62 Aligned_cols=257 Identities=19% Similarity=0.363 Sum_probs=206.1
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
.++.|...+.||+|+||.||+|..+ ++..|++|++..... ....+.+|++.+.+++|+|++++++++... ...++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVG--DELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--CEEEE
Confidence 4556777889999999999999987 689999999976542 456789999999999999999999998654 78999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|+||+++++|.+++.... ..+++..+..++.+++.||+|||+.+ |+|+||+|+||+++.++.+||+|||++.
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~g-----i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 164 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQN-----VIHRDIKSDNILLSKDGSVKLADFGFAA 164 (286)
T ss_pred EEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCChhhEEEcCCCCEEECccchhh
Confidence 999999999999998754 25899999999999999999999987 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC-CCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG-KFS 644 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 644 (689)
....... ......++..|+|||++.+..++.++|||||||++|||++|+.|+........ ........... ...
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~ 239 (286)
T cd06614 165 QLTKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA----LFLITTKGIPPLKNP 239 (286)
T ss_pred hhccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCcch
Confidence 5543221 11123356789999999888899999999999999999999999864322111 11111111111 112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhC
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 680 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~ 680 (689)
......+.+++.+|++.+|.+||++.+++++.....
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 224567999999999999999999999998765443
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.3e-35 Score=302.65 Aligned_cols=249 Identities=21% Similarity=0.298 Sum_probs=202.4
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+|...+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|++++++++||||+++++++ ......++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF--QDEENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh--cCCCeEEEE
Confidence 4677899999999999999986 689999999975432 23457899999999999999999999988 445789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
+||+++++|.+++... ..+++.....|+.|+++||.|||+.+ ++|+||||+||++++++.++|+|||++..
T Consensus 79 ~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 79 VDLLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSKG-----IIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred EeCCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 9999999999999765 24889999999999999999999887 99999999999999999999999999886
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
..... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ...+...... .....+..
T Consensus 150 ~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~ 224 (258)
T cd05578 150 VTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPAT 224 (258)
T ss_pred cCCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCccc
Confidence 65432 1223446678999999988889999999999999999999999986542210 1111111111 22334455
Q ss_pred HHHHHHHHHHHhccCCCCCCCCH--HHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTM--EAVIE 674 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~--~evl~ 674 (689)
.+..+.+++.+||+.||.+||++ +|+++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 225 WSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred CcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 56889999999999999999999 66654
No 309
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.8e-35 Score=304.71 Aligned_cols=256 Identities=23% Similarity=0.414 Sum_probs=198.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|+..+.||+|++|.||+|+.. +|..||||++...........+.+|++++++++|+||+++++++.. .+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT--ENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee--CCcEEEEEe
Confidence 4777899999999999999986 6899999999866544445678899999999999999999999854 467899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|++ |+|.+++..... ...+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+|++|||+++...
T Consensus 79 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 79 YMD-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENR-----VLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred cCC-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 998 489998875432 235899999999999999999999987 9999999999999999999999999997654
Q ss_pred CCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh-----------hHhhc
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF-----------ENFID 636 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~-----------~~~~~ 636 (689)
.... ......++..|++||.+.+. .++.++|||||||++|||++|+.|+............+ ..+.+
T Consensus 152 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 152 IPVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred CCcc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 3211 11223456789999987654 56899999999999999999999986432211111000 00000
Q ss_pred -cccCCCC-----------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 637 -RNLKGKF-----------SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 637 -~~~~~~~-----------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+.+...+ .+..+..+.+++..|++.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0011111 11235678899999999999999999999875
No 310
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3e-35 Score=312.49 Aligned_cols=258 Identities=20% Similarity=0.331 Sum_probs=198.1
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 484 (689)
.++|+..+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++.++ +||||+++++++........+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456778899999999999999976 68899999986432 223445678899999999 999999999998655556789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||++ ++|..++... .++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 86 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~-----i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSGN-----VIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred EEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCcEEEeeccch
Confidence 9999997 5999988653 4889999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCcee----eeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh----------
Q 005586 565 KLLADDIVF----SVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA---------- 629 (689)
Q Consensus 565 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~---------- 629 (689)
+........ ......++..|+|||++.+ ..++.++||||||+++|||+||+.||...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 866443211 1122346778999998755 4578999999999999999999999853211110000
Q ss_pred ---------hhhHhhccccCC------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 630 ---------TFENFIDRNLKG------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 630 ---------~~~~~~~~~~~~------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
...++++..... ........++.+++.+|++.||++||++.+++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 000111100000 00111356789999999999999999999999874
No 311
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.5e-35 Score=295.98 Aligned_cols=255 Identities=24% Similarity=0.365 Sum_probs=207.7
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|++|.||+|..+ +++.|++|++..... ....+.+.+|++.+++++|+||+++++.+........++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999987 799999999876542 23457899999999999999999999998654336789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.... .++|..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||.+...
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~-----~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSNG-----IVHRDIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEEcCCCCEEEcccccEEec
Confidence 9999999999997653 5899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCcee-eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 568 ADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
...... ......++..|+|||...+...+.++||||||++++||++|+.|+....... ...............+..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 228 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM---AALYKIGSSGEPPEIPEH 228 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHhccccCCCcCCCcc
Confidence 554321 1223446678999999988889999999999999999999999986543111 111111111222334555
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
....+.+++.+|++.+|++||++.|++++-
T Consensus 229 ~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~ 258 (260)
T cd06606 229 LSEEAKDFLRKCLRRDPKKRPTADELLQHP 258 (260)
T ss_pred cCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence 578899999999999999999999999864
No 312
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5e-35 Score=306.91 Aligned_cols=261 Identities=22% Similarity=0.370 Sum_probs=200.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|...+.||+|+||.||+|..+ +|+.||+|+++..... .....+.+|+.++.+++|+||+++++++.....+..++|
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 46788899999999999999975 6899999998754322 223456789999999999999999999876555678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||++ ++|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 87 ~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 87 MEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHENF-----IIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCCCEEECccceeee
Confidence 99996 58988887543 35899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-----------Hh
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-----------NF 634 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~-----------~~ 634 (689)
...... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.............. .+
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 158 YGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred cCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 654321 1122234667999998865 4578999999999999999999999864322111110000 00
Q ss_pred hccc------cCCC-C------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 635 IDRN------LKGK-F------SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 635 ~~~~------~~~~-~------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+.. .... . .......+.+++..|++.||++||++.|++++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 0000 0000 0 011256678999999999999999999999987765
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.4e-35 Score=305.04 Aligned_cols=260 Identities=20% Similarity=0.310 Sum_probs=195.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCC---Ce
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGR---GE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~---~~ 482 (689)
++|+..+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.++++++ ||||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 35778899999999999999976 6899999998754322 23357889999999995 6999999998854321 23
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEec
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIAD 560 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~D 560 (689)
.++||||+++ +|.+++...... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-----i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-----VMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCChHHEEEecCCCeEEEee
Confidence 7999999985 899988754332 346899999999999999999999987 999999999999998 89999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc--
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-- 637 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-- 637 (689)
||+++....... ......+++.|+|||++.+ ..++.++|||||||++|||+||+.||............+...-.+
T Consensus 155 fg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 155 LGLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred cccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999876533211 1112245678999998865 457899999999999999999999986432211111100000000
Q ss_pred ----------------ccCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 638 ----------------NLKG----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 638 ----------------~~~~----~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.... ...+....++.+++.+|++.+|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0011245678899999999999999999999876
No 314
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.5e-35 Score=303.92 Aligned_cols=254 Identities=22% Similarity=0.384 Sum_probs=194.7
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|+..+.||+|++|.||+|..+ +|..||+|++...... .....+.+|++.+++++|||++++++++.. .+..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~--~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS--ENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc--CCeEEEEEe
Confidence 456788999999999999875 7999999999765422 233578899999999999999999999854 578999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|++ ++|.+++..... ..+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.+||+|||+++.+.
T Consensus 79 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~~-----~~H~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 79 FLD-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSHR-----VLHRDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred ccC-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence 995 799999876432 35899999999999999999999877 9999999999999999999999999997654
Q ss_pred CCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh---------------
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--------------- 632 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~--------------- 632 (689)
.... ......++..|+|||++.+. .++.++|||||||++|||+||+.||..............
T Consensus 151 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 151 VPVR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred CCcc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 3211 11122356789999987654 578999999999999999999999854322111000000
Q ss_pred --Hhhccc--cC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 633 --NFIDRN--LK----GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 633 --~~~~~~--~~----~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
++.... .. ..........+.+++.+|++.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00 00111224678899999999999999999999875
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.1e-35 Score=313.46 Aligned_cols=259 Identities=20% Similarity=0.332 Sum_probs=197.4
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCC---CCeE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---RGEC 483 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~---~~~~ 483 (689)
+++|...+.||+|+||.||+|... +|+.||+|++...........+.+|+.++++++||||+++++++.... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467888999999999999999865 689999999875443445567889999999999999999999875432 2357
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++|+||++ ++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~~-----ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSAN-----VLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHEEECCCCCEEECcccc
Confidence 99999996 5888887543 3899999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCceee--eecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh-----------h
Q 005586 564 HKLLADDIVFS--VLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES-----------A 629 (689)
Q Consensus 564 a~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~-----------~ 629 (689)
++......... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 98654322111 112346778999998754 468999999999999999999999985432111000 0
Q ss_pred hhhHhhccc-------c--CCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 630 TFENFIDRN-------L--KGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 630 ~~~~~~~~~-------~--~~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.+..+.+.. . ....+ .....++.+++.+||+.||++||++.|++++-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~ 294 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 011101000 0 00000 123467889999999999999999999998843
No 316
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.4e-35 Score=304.14 Aligned_cols=254 Identities=17% Similarity=0.365 Sum_probs=196.4
Q ss_pred ccCCcccccccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|...+.||+|+||.||+|..++ ++.||||+++.........++..|+.++.+.. ||||+++++++.. ....++|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT--DSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec--CCeEEEE
Confidence 346677899999999999999874 89999999986554445567778888777775 9999999999954 4689999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCC-CCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|||++ +++.+++.... ..+++..+..|+.|++.||+|||+. + |+||||+|+||++++++.+||+|||++.
T Consensus 93 ~e~~~-~~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~~-----i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 93 MELMS-TCLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKEKHG-----VIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred eeccC-cCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCC-----EecCCCcHHHEEEcCCCCEEECccccch
Confidence 99985 57777765532 2589999999999999999999973 4 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCC----CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGR----FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 641 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 641 (689)
.+..... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.|+...... .......+......
T Consensus 164 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~ 238 (296)
T cd06618 164 RLVDSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEPPS 238 (296)
T ss_pred hccCCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCCCC
Confidence 6644321 12234667899999987554 789999999999999999999998642111 01111222221110
Q ss_pred -CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 642 -KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 642 -~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
........++.+++.+|++.||++||++.+++++.+.
T Consensus 239 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 239 LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 1111245678999999999999999999999988653
No 317
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.4e-34 Score=293.08 Aligned_cols=248 Identities=23% Similarity=0.422 Sum_probs=201.4
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
+|...+.||+|++|.||++..+ ++..+++|++..... .....+.+|++.+++++|+|++++++++.. ....++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLK--KDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEEe
Confidence 3667789999999999999986 789999999977653 355789999999999999999999998854 467899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++++|.+++.... ..+++..+..++.+++.||+|||+.+ ++||||+|+||++++++.+||+|||.+....
T Consensus 78 ~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~-----i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 78 FCSGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSNG-----IIHRDIKAANILLTSDGEVKLIDFGLSAQLS 149 (253)
T ss_pred cCCCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcCC-----EecCCCCHHHEEEccCCeEEEeecccccccc
Confidence 999999999987653 24899999999999999999999977 9999999999999999999999999988765
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH--
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES-- 646 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 646 (689)
.... .....++..|+|||++.+..++.++||||||++++||++|+.|+.......... ... . ......+..
T Consensus 150 ~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~---~-~~~~~~~~~~~ 222 (253)
T cd05122 150 DTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-KIA---T-NGPPGLRNPEK 222 (253)
T ss_pred cccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHH---h-cCCCCcCcccc
Confidence 4321 123346678999999988889999999999999999999999986432111100 000 0 111111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....+.+++..|++.||++||++.|++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 25679999999999999999999999876
No 318
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.5e-35 Score=307.39 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=195.8
Q ss_pred cCCcccccccCCcceEEEEEec---CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
.|...+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.++.+++||||+++++++........+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3667789999999999999975 478999999986431 22235678899999999999999999999765557899
Q ss_pred EEEEcCCCCCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC----CCCeEEe
Q 005586 485 LIYDFAPKGKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ----QFNPLIA 559 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~----~~~~kl~ 559 (689)
+||||+++ +|.+++...... ...+++...+.|+.|++.||+|||+.+ |+||||||+||+++. ++.+||+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-----VLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-----EeeCCCCHHHEEEcCCCCccceEEEC
Confidence 99999975 777777543322 225889999999999999999999987 999999999999999 9999999
Q ss_pred cccccccccCCce--eeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHH-----Hhhhhh
Q 005586 560 DCGLHKLLADDIV--FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLA-----AESATF 631 (689)
Q Consensus 560 DfGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~-----~~~~~~ 631 (689)
|||+++....... .......++..|+|||++.+. .++.++|||||||+++||++|+.|+....... .....+
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred CCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 9999987644321 112233467789999987664 57899999999999999999999985332110 000000
Q ss_pred h------------------------HhhccccCCCCC---------H--HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 632 E------------------------NFIDRNLKGKFS---------E--SEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 632 ~------------------------~~~~~~~~~~~~---------~--~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
. ...+......++ . ....++.+++.+|++.||++||++.|++++
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000000011111 0 234568899999999999999999999876
No 319
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-36 Score=301.13 Aligned_cols=252 Identities=19% Similarity=0.268 Sum_probs=204.7
Q ss_pred HHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCe
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 482 (689)
...+.|...++||+||||.||-++.+ +|+.+|.|++.+...+ ..+.-...|-++|.+++.+.||.+--.| +..+.
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--eTkd~ 259 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--ETKDA 259 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee--cCCCc
Confidence 34577889999999999999999987 6999999998766543 3445678899999999999999985444 45688
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
+++|+..|.+|||.-+|...+. ..+++...+.+|.+|+.||++||... ||.||+||+|||||+.|+++|+|.|
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~~-----iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRRR-----IVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred eEEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhcc-----eeeccCChhheeeccCCCeEeeccc
Confidence 9999999999999999987653 34999999999999999999999887 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 642 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (689)
||..+.+.... ....||.||||||++.++.|+...|.||+||++|||+.|+.||........+ ..+.+.+- .-..+
T Consensus 333 LAvei~~g~~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-eEvdrr~~-~~~~e 408 (591)
T KOG0986|consen 333 LAVEIPEGKPI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-EEVDRRTL-EDPEE 408 (591)
T ss_pred eEEecCCCCcc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-HHHHHHHh-cchhh
Confidence 99988776532 3347999999999999999999999999999999999999999643221111 11111110 11224
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTME 670 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~ 670 (689)
+++.-++++..+...-+++||++|.-.+
T Consensus 409 y~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 409 YSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cccccCHHHHHHHHHHHccCHHHhccCC
Confidence 5666677888899999999999996543
No 320
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1e-34 Score=299.87 Aligned_cols=247 Identities=18% Similarity=0.273 Sum_probs=189.6
Q ss_pred ccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHH---HhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 416 LLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYL---LTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~---l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
.||+|+||.||++... +|+.+|+|.+...... .....+.+|..+ +...+||||+.+++++.. .+..++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT--PDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec--CCeEEEEEec
Confidence 4899999999999875 6899999998754322 222334455433 334579999999988854 4678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+++.... .++|.....|+.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 79 ~~~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~~-----ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 79 MNGGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHNRF-----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (279)
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cCCCCCCHHHEEECCCCCEEEccCCcceeccc
Confidence 99999999987543 4899999999999999999999987 99999999999999999999999999876543
Q ss_pred CceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ...... ........+....
T Consensus 150 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~-~~~~~~~~~~~~~ 223 (279)
T cd05633 150 KK---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM-TLTVNVELPDSFS 223 (279)
T ss_pred cC---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHH-hhcCCcCCccccC
Confidence 22 122357889999998864 5579999999999999999999999964311100 011111 1111223344556
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHHHHHhh
Q 005586 649 AKLGKMALVCTHEDPENRP-----TMEAVIEELTVA 679 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~~~ 679 (689)
.++.+++..|++.||++|| +++|++++....
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~ 259 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK 259 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence 7889999999999999999 699999886543
No 321
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-34 Score=310.16 Aligned_cols=258 Identities=18% Similarity=0.312 Sum_probs=199.3
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----C
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----R 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~ 480 (689)
..++|+..+.||+|+||.||+|... +|+.||+|++.... ......++.+|+.++.+++||||+++++++.... .
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3467888999999999999999875 78999999986532 2233457788999999999999999999875332 1
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++||||++ ++|.+.+... +++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~g-----i~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHEEECCCCCEEEcc
Confidence 35799999995 5888887532 788899999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT---------- 630 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~---------- 630 (689)
||+++....... .....++..|+|||.+.+..++.++|||||||++|||++|+.||............
T Consensus 162 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 162 FGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred CccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 999987654321 12234677899999999989999999999999999999999998643211111000
Q ss_pred --------hhHhhcccc---------------CC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 631 --------FENFIDRNL---------------KG----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 631 --------~~~~~~~~~---------------~~----~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.....+... .. ........++.+++.+|++.||++||++.|++++-+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~ 314 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI 314 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhH
Confidence 000000000 00 0011235678899999999999999999999988654
No 322
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.8e-35 Score=300.45 Aligned_cols=247 Identities=20% Similarity=0.276 Sum_probs=194.5
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||+||++..+ +|+.||+|.+..... ......|..|++++++++||||+++++++. ..+..++||||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE--TKDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe--cCCeEEEEEecCCCC
Confidence 689999999999865 689999999875432 223456788999999999999999999884 357899999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++.......
T Consensus 79 ~L~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~-----i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 150 (277)
T cd05577 79 DLKYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQRR-----IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK- 150 (277)
T ss_pred cHHHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEECCCCCEEEccCcchhhhccCCc-
Confidence 99999976542 35899999999999999999999987 99999999999999999999999999876643221
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
.....++..|+|||++.+..++.++|||||||++|||++|+.||......... ..+.+... ......+......+.+
T Consensus 151 -~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (277)
T cd05577 151 -IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRTL-EMAVEYPDKFSPEAKD 227 (277)
T ss_pred -cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhccc-cccccCCccCCHHHHH
Confidence 12234667899999998888999999999999999999999998643221100 01111110 1111233344677899
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHHH
Q 005586 654 MALVCTHEDPENRP-----TMEAVIEEL 676 (689)
Q Consensus 654 l~~~Cl~~dp~~RP-----s~~evl~~L 676 (689)
++.+||+.+|++|| +..+++.+.
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVREHP 255 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHhCh
Confidence 99999999999999 777777654
No 323
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.3e-35 Score=304.04 Aligned_cols=259 Identities=19% Similarity=0.336 Sum_probs=197.3
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC-----
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----- 479 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----- 479 (689)
+.++|+..+.||+|+||.||+|..+ +|+.||+|+++.... ......+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567888999999999999999986 689999999975432 223356788999999999999999999885432
Q ss_pred ---CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCe
Q 005586 480 ---RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 556 (689)
Q Consensus 480 ---~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~ 556 (689)
....++|+||+++ ++..++.... ..+++..+..|+.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-----i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHKKN-----FLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCCcE
Confidence 2378999999975 7777776532 24899999999999999999999987 9999999999999999999
Q ss_pred EEecccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh-
Q 005586 557 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF- 634 (689)
Q Consensus 557 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~- 634 (689)
||+|||+++..............++..|+|||.+.+ ..++.++|||||||++|||++|+.|+......... ..+.+.
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~-~~~~~~~ 234 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQL-ELISRLC 234 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHh
Confidence 999999998765433212222334667999998764 45789999999999999999999998643211110 000000
Q ss_pred -----------hccccC----------C---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 635 -----------IDRNLK----------G---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 635 -----------~~~~~~----------~---~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...... . ......+..+.+++..||+.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000 0 0011125678999999999999999999999875
No 324
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-34 Score=293.15 Aligned_cols=253 Identities=19% Similarity=0.384 Sum_probs=205.5
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|...+.||+|+||.||++... ++..||+|++..... .....++.+|++++++++|+|++++++.+.. ....++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~--~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE--KGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec--CCEEEEEE
Confidence 4677789999999999999976 689999999976543 2455678999999999999999999998854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++.........+++..+..++.+++.||+|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-----ILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-----EecccCChHHeEEcCCCcEEECCccceeec
Confidence 999999999999875322346899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
..... ......++..|+|||...+..++.++||||+|++++||++|+.|+....... ........ .....+...
T Consensus 154 ~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~ 227 (258)
T cd08215 154 SSTVD-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE----LALKILKG-QYPPIPSQY 227 (258)
T ss_pred ccCcc-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH----HHHHHhcC-CCCCCCCCC
Confidence 54431 1122346677999999988889999999999999999999999986432111 11111111 122233445
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
...+.+++..|+..+|++||++.|++++
T Consensus 228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 228 SSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 6789999999999999999999999876
No 325
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.9e-34 Score=305.13 Aligned_cols=255 Identities=20% Similarity=0.344 Sum_probs=192.7
Q ss_pred cccccC--CcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKG--NFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
..||+| +||+||++... +|+.||+|++...... ...+.+.+|+.+++.++||||+++++++.. .+..++|+||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceEEEEecc
Confidence 357776 89999999975 7999999998765432 334678899999999999999999999954 46789999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|++||+.+......
T Consensus 82 ~~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~-----ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 82 AYGSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQNG-----YIHRNIKASHILISGDGLVSLSGLSHLYSLVRN 154 (328)
T ss_pred cCCCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEeCCCcEEEechHHHhhhhcc
Confidence 99999999986532 24889999999999999999999887 999999999999999999999999865433211
Q ss_pred cee-e-----eecCCCCCCCCCccccccC--CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh----------
Q 005586 571 IVF-S-----VLKTSAAMGYLAPEYVTTG--RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE---------- 632 (689)
Q Consensus 571 ~~~-~-----~~~~~~~~~y~aPE~~~~~--~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~---------- 632 (689)
... . .....++..|+|||++.+. .++.++|||||||++|||++|+.||............+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 100 0 0011234569999998763 478999999999999999999999964322111000000
Q ss_pred -------------------------------HhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 633 -------------------------------NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 633 -------------------------------~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+..+...........+.+++.+||+.||++|||+.|++++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 0000011111223456789999999999999999999999987654
No 326
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-34 Score=300.77 Aligned_cols=253 Identities=19% Similarity=0.292 Sum_probs=196.2
Q ss_pred cCCcccccccCCcceEEEEEe----cCCcEEEEEEecccCC---chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCC
Q 005586 410 CFSEVNLLGKGNFSSVYKGTL----RDGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 481 (689)
+|+..+.||+|+||.||++.. .+|..||+|++..... ....+.+.+|++++.++ +|+||+++++++. ...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~--~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ--TDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee--cCC
Confidence 366778999999999999986 3689999999875431 22346788999999999 5999999998874 346
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++++|.+++.... .+++.....++.|+++||+|||+.+ ++||||||+|||+++++.+||+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~~-----i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHKLG-----IIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHeEECCCCCEEEeeC
Confidence 7899999999999999997643 3788999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCccccccC--CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG--RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|+++..............++..|+|||.+... .++.++||||||+++|||+||+.|+...............+...
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-- 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--
Confidence 99987654332222234567889999998753 46789999999999999999999985321111111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRP-----TMEAVIEE 675 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~ 675 (689)
...++......+.+++.+|++.||++|| +..+++.+
T Consensus 228 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 1123444566789999999999999997 77777765
No 327
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.1e-34 Score=301.99 Aligned_cols=254 Identities=20% Similarity=0.375 Sum_probs=199.1
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
.|+..+.||+|+||.||+|... ++..+|+|.+.... ......++.+|+++++.++|+|++++++++.. ....++|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 93 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAWLV 93 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCeeEEE
Confidence 3556688999999999999975 68899999986432 22334578899999999999999999999855 4678999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||+. |++.+++.... ..+++.++..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++..
T Consensus 94 ~e~~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH~~~-----i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 164 (308)
T cd06634 94 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (308)
T ss_pred EEccC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHhEEECCCCcEEECCccccee
Confidence 99996 68888876433 24889999999999999999999887 99999999999999999999999999876
Q ss_pred ccCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
..... ...++..|+|||.+. ...++.++|||||||++|||++|+.|+........ .............
T Consensus 165 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~ 235 (308)
T cd06634 165 MAPAN-----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQ 235 (308)
T ss_pred ecCcc-----cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH----HHHHhhcCCCCcC
Confidence 54321 234677899999874 35678999999999999999999999854321111 0111111111111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCcc
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 683 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~~ 683 (689)
.......+.+++.+||+.+|++||++.+++++.+......
T Consensus 236 ~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 2345677899999999999999999999999877665443
No 328
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=300.65 Aligned_cols=258 Identities=16% Similarity=0.159 Sum_probs=183.7
Q ss_pred ccCCcccccccCCcceEEEEEecC----CcEEEEEEecccCCch--H--------HHHHHHHHHHHhccCCCcceeEeeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKS--E--------EAEFVKGLYLLTSLRHENIIRLRGF 474 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~--~--------~~~f~~e~~~l~~l~H~niv~l~g~ 474 (689)
++|...+.||+|+||.||+|...+ +..+|+|......... + ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 467788999999999999999764 4556666543322111 0 1122334455667899999999987
Q ss_pred EEcCCC--CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 475 CCSRGR--GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 475 ~~~~~~--~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
+..... ...++++|++. .++.+.+.... ..++.....|+.|+++||+|||+.+ |+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----iiHrDiKp~Nill~~ 161 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIHEHG-----ISHGDIKPENIMVDG 161 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcC
Confidence 643322 13467778774 36666665432 2567888999999999999999987 999999999999999
Q ss_pred CCCeEEecccccccccCCce------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHH
Q 005586 553 QFNPLIADCGLHKLLADDIV------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA 626 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~ 626 (689)
++.+||+|||+++.+..... .......+|..|+|||+..+..++.++|||||||++|||++|+.||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 99999999999986642211 011223588899999999999999999999999999999999999964421110
Q ss_pred -hhhhhhHhhccccCCC-CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 627 -ESATFENFIDRNLKGK-FSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 627 -~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
......+++.+...+. .....+..+.+++..|+..+|++||++.++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0000111111111111 1123357799999999999999999999999876
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.6e-34 Score=300.77 Aligned_cols=260 Identities=20% Similarity=0.337 Sum_probs=195.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+.||+|++|.||+|..+ +|+.||+|++..... ......+.+|++++++++||||+++++++.. ....++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--CCeEEEE
Confidence 46778899999999999999976 689999999865432 2234578899999999999999999999854 5789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHK 565 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~ 565 (689)
|||++ ++|.+++..... ..+++.....++.|++.||+|||+.+ ++||||||+||++++ ++.+||+|||+++
T Consensus 80 ~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~-----i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSHR-----VLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred Eeccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCCcceEEEECCCCEEEEccccccc
Confidence 99996 588888754332 23678888899999999999999987 999999999999985 5678999999997
Q ss_pred cccCCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-------Hhh--
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-------NFI-- 635 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~-------~~~-- 635 (689)
....... ......++..|+|||++.+. .++.++|||||||++|||+||+.|+............+. +..
T Consensus 152 ~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 152 AFGIPVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred ccCCCcc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 6543211 11223456789999988664 578999999999999999999999864322111110000 000
Q ss_pred --------c--cccCCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 636 --------D--RNLKGK----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 636 --------~--~~~~~~----~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
. +..... .....+.++.+++.+|++.+|++||++.+++++-+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence 0 000000 0112345688999999999999999999999875543
No 330
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.2e-34 Score=294.15 Aligned_cols=250 Identities=19% Similarity=0.247 Sum_probs=191.9
Q ss_pred HHHHHhccCCccccc--ccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcC
Q 005586 403 EVESATQCFSEVNLL--GKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR 478 (689)
Q Consensus 403 ~l~~at~~f~~~~~l--g~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 478 (689)
+.....++|...+.+ |+|+||.||++..+ ++..+|+|.+........ |+.....+ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI------EPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh------hHHHHHHhhcCCCEEEEEEEEec-
Confidence 334444566666666 99999999999875 688999999875432111 12122112 79999999999854
Q ss_pred CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeE
Q 005586 479 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPL 557 (689)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~k 557 (689)
.+..++||||+++|+|.+++.... .++|.++..++.|+++||.|||+.+ ++||||||+||+++.++ .++
T Consensus 81 -~~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~nil~~~~~~~~~ 150 (267)
T PHA03390 81 -LKGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKHN-----IIHNDIKLENVLYDRAKDRIY 150 (267)
T ss_pred -CCeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHEEEeCCCCeEE
Confidence 468999999999999999997653 4899999999999999999999987 99999999999999998 999
Q ss_pred EecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc
Q 005586 558 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 558 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++|+.|+............+......
T Consensus 151 l~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PHA03390 151 LCDYGLCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK 225 (267)
T ss_pred EecCccceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc
Confidence 99999988664332 2346788999999998889999999999999999999999996432211111111111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHH
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPT-MEAVIEEL 676 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs-~~evl~~L 676 (689)
. .......+..+.+++..|++.+|++||+ ++|++++-
T Consensus 226 ~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~ 263 (267)
T PHA03390 226 K--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHP 263 (267)
T ss_pred c--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence 1 1223345678999999999999999995 79998764
No 331
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.7e-34 Score=299.69 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=195.3
Q ss_pred CCcccccccCCcceEEEEEec----CCcEEEEEEecccCC---chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCe
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 482 (689)
|+..+.||+|+||.||+++.. +++.||||.++.... ......+.+|++++.++ +||||+++.+.+. ....
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~--~~~~ 79 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ--TDTK 79 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee--cCCE
Confidence 666789999999999999753 578899999875321 22345788999999999 5999999998874 3467
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.++||||+++|+|.+++.... .+++.....++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~-----~~H~dl~p~nil~~~~~~~~l~dfg 150 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQLG-----IIYRDIKLENILLDSEGHVVLTDFG 150 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHeEECCCCCEEEEECc
Confidence 899999999999999987542 4889999999999999999999877 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccCC--CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
+++..............++..|+|||.+.+.. .+.++||||||+++|||+||+.|+...............+... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~ 228 (288)
T cd05583 151 LSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--K 228 (288)
T ss_pred cccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--C
Confidence 98865443222222234677899999987655 7889999999999999999999985321111111111111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
...+......+.+++.+|++.+|++|||+.++.+.|.
T Consensus 229 ~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 229 PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1233344567889999999999999999877755443
No 332
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.3e-34 Score=298.02 Aligned_cols=247 Identities=16% Similarity=0.330 Sum_probs=196.3
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
..||+|+||.||++..+ +|..||+|++.... ......+.+|+.++++++|+|++++++++.. .+..++||||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEecCCCC
Confidence 57999999999999875 78999999986543 3445679999999999999999999998854 47899999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++... .+++.....++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 103 ~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~g-----ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~- 171 (292)
T cd06657 103 ALTDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQG-----VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP- 171 (292)
T ss_pred cHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEECCCCCEEEcccccceecccccc-
Confidence 999987542 3789999999999999999999987 99999999999999999999999999876543221
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......++.+|+|||++.+..++.++|||||||++|||++|+.|+......... ....+...+.+. ........+.+
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~ 248 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPKLK--NLHKVSPSLKG 248 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhhCCcccC--CcccCCHHHHH
Confidence 112234678899999998888999999999999999999999998643221110 111111111111 11233556889
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 654 MALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
++.+||+.+|.+||++.+++++-+.
T Consensus 249 li~~~l~~~P~~R~~~~~ll~~~~~ 273 (292)
T cd06657 249 FLDRLLVRDPAQRATAAELLKHPFL 273 (292)
T ss_pred HHHHHHhCCcccCcCHHHHhcChHH
Confidence 9999999999999999999987443
No 333
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.8e-34 Score=289.39 Aligned_cols=249 Identities=23% Similarity=0.413 Sum_probs=202.3
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+|+..+.||+|++|.||+|... +++.|++|.+...... .....+.+|++++.+++|+|++++++++.. ....++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 3667789999999999999876 6889999999866432 345689999999999999999999999854 47899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 79 e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 79 EYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQG-----VIHRDIKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred ecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhCC-----cccCCCCHHHEEECCCCCEEEeccccceec
Confidence 999999999998764 24899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
...... .....++..|+|||...+..++.++||||+|+++|||++|+.|+........ ..... .......+...
T Consensus 150 ~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~ 223 (254)
T cd06627 150 NDVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA----LFRIV-QDDHPPLPEGI 223 (254)
T ss_pred CCCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHh-ccCCCCCCCCC
Confidence 543321 1223467789999998887889999999999999999999999864322111 11111 11112233444
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
+..+.+++.+|+..+|++||++.|++.+
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 224 SPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 6788999999999999999999999864
No 334
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-34 Score=307.35 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=198.8
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-C-----CcceeEeeEEEcCCCCe
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-H-----ENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H-----~niv~l~g~~~~~~~~~ 482 (689)
+|...++||+|.||.|-+|... +++.||||+++... .-..+-..|+++|..++ | -|+|++++|+.. +++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--r~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--RNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--ccc
Confidence 7888999999999999999865 69999999998763 33456678999999997 4 499999999955 589
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC--CCeEEec
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ--FNPLIAD 560 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~--~~~kl~D 560 (689)
.+||+|.+. -+|.++|+.+.-. .++......|+.||+.||.+||+.+ |||+||||+||||.+. ..+||+|
T Consensus 263 lciVfELL~-~NLYellK~n~f~--Glsl~~ir~~~~Qil~~L~~L~~l~-----IIHcDLKPENILL~~~~r~~vKVID 334 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFR--GLSLPLVRKFAQQILTALLFLHELG-----IIHCDLKPENILLKDPKRSRIKVID 334 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhCC-----eeeccCChhheeeccCCcCceeEEe
Confidence 999999994 5999999887543 4889999999999999999999988 9999999999999754 4689999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh----------
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT---------- 630 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~---------- 630 (689)
||.+....+..+ . -.-+..|+|||++.+.+|+.+.||||||||+.||+||.+.|.+..........
T Consensus 335 FGSSc~~~q~vy-t---YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~ 410 (586)
T KOG0667|consen 335 FGSSCFESQRVY-T---YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPK 410 (586)
T ss_pred cccccccCCcce-e---eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHH
Confidence 999987766443 1 22345699999999999999999999999999999998776443211100000
Q ss_pred -------hhHhh--------------------------------ccccCC--------CCCHHHHHHHHHHHHHhccCCC
Q 005586 631 -------FENFI--------------------------------DRNLKG--------KFSESEAAKLGKMALVCTHEDP 663 (689)
Q Consensus 631 -------~~~~~--------------------------------~~~~~~--------~~~~~~~~~l~~l~~~Cl~~dp 663 (689)
...++ +..... ......-..+.+++.+|+..||
T Consensus 411 mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP 490 (586)
T KOG0667|consen 411 MLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDP 490 (586)
T ss_pred HHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCc
Confidence 00000 000000 0011335568999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 005586 664 ENRPTMEAVIEELTVA 679 (689)
Q Consensus 664 ~~RPs~~evl~~L~~~ 679 (689)
.+|+|..|+++|-+..
T Consensus 491 ~~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 491 AERITPAQALNHPFLT 506 (586)
T ss_pred hhcCCHHHHhcCcccc
Confidence 9999999999987654
No 335
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3e-34 Score=296.70 Aligned_cols=254 Identities=23% Similarity=0.385 Sum_probs=197.7
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|++|.||+|... +|+.+++|++...... .....+.+|++++++++|+||+++++++.. ....++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCCEEEEEe
Confidence 445678999999999999875 7899999998765432 345678899999999999999999999844 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+....
T Consensus 79 ~~~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dl~p~nili~~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 79 FMDT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSHG-----ILHRDLKPENLLINTEGVLKLADFGLARSFG 149 (283)
T ss_pred ccCC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence 9975 8988887643 24899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh-----------Hhhc
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-----------NFID 636 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~-----------~~~~ 636 (689)
.... ......++..|+|||.+.+. .++.++||||||+++|||+||+.||.............. .+.+
T Consensus 150 ~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 150 SPVR-PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred CCcc-cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 5431 11223456779999998776 789999999999999999999999854322111100000 0000
Q ss_pred ---c---ccC-------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 637 ---R---NLK-------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 637 ---~---~~~-------~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
. ... .........++.+++..||+.||.+||++.+++.+-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~ 281 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP 281 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence 0 000 001123467899999999999999999999998763
No 336
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.2e-34 Score=297.85 Aligned_cols=253 Identities=23% Similarity=0.365 Sum_probs=194.8
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|+||.||+|... +++.|++|++.............+|+..+.+++ |+|++++++++.. .+..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEEe
Confidence 456688999999999999986 588999999876543334445667999999999 9999999999844 578999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|+ +|+|.+++..... ..++|..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||+++...
T Consensus 79 ~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~-----i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~ 150 (283)
T cd07830 79 YM-EGNLYQLMKDRKG--KPFSESVIRSIIYQILQGLAHIHKHG-----FFHRDLKPENLLVSGPEVVKIADFGLAREIR 150 (283)
T ss_pred cC-CCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCChhhEEEcCCCCEEEeecccceecc
Confidence 99 8899999876542 34899999999999999999999987 9999999999999999999999999998665
Q ss_pred CCceeeeecCCCCCCCCCccccc-cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh-----------------h
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVT-TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA-----------------T 630 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~-----------------~ 630 (689)
.... .....++..|+|||.+. ...++.++||||||++++||++|+.|+........... .
T Consensus 151 ~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 151 SRPP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred CCCC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 4321 12234667899999875 44578999999999999999999998854321110000 0
Q ss_pred hhHhhccccCC-------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 631 FENFIDRNLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 631 ~~~~~~~~~~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....++..... .........+.+++.+|++.+|++||++.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000000 0011124679999999999999999999999876
No 337
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-34 Score=294.42 Aligned_cols=242 Identities=21% Similarity=0.357 Sum_probs=192.7
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||.||+++.. +|+.+++|.+..... ......+.+|++++.+++||||+++++.+. .....++||||++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ--GKKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee--cCcEEEEEEecCCCC
Confidence 689999999999987 499999999876542 234567899999999999999999998874 357889999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce-
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV- 572 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 572 (689)
+|.+++.... .+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 79 ~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~~-----i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 79 DLASLLENVG----SLDEDVARIYIAEIVLALEYLHSNG-----IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcC-----eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence 9999997643 4899999999999999999999887 99999999999999999999999999875433211
Q ss_pred ------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 573 ------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 573 ------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
.......++..|+|||.......+.++||||||+++||++||+.|+....... .......... ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~~~~--~~~~~ 223 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE----IFQNILNGKI--EWPED 223 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcCCc--CCCcc
Confidence 01122345678999999988889999999999999999999999986432211 1111111111 12222
Q ss_pred H--HHHHHHHHHHhccCCCCCCCCH---HHHHHH
Q 005586 647 E--AAKLGKMALVCTHEDPENRPTM---EAVIEE 675 (689)
Q Consensus 647 ~--~~~l~~l~~~Cl~~dp~~RPs~---~evl~~ 675 (689)
. +..+.+++..|++.+|++||++ .+++++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 224 VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 2 6788999999999999999999 555543
No 338
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.7e-34 Score=294.68 Aligned_cols=255 Identities=20% Similarity=0.348 Sum_probs=193.3
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhcc---CCCcceeEeeEEEcCCC---Ce
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSL---RHENIIRLRGFCCSRGR---GE 482 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~~~---~~ 482 (689)
|+..+.||+|+||.||+|+.+ +++.||+|+++..... .....+.+|+.++.++ +|+|++++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456789999999999999987 4899999999754322 2234566777766655 69999999999865422 13
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.+++|||++ ++|.+++..... ..++|..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~-----i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSHR-----IVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCChhhEEEccCCCEEEeccC
Confidence 899999997 589998876432 24899999999999999999999987 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHh--------
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF-------- 634 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~-------- 634 (689)
++........ .....++..|+|||++.+..++.++|||||||++|||+||+.|+............+...
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 153 LARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEW 230 (287)
T ss_pred cceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhc
Confidence 9987644321 122345678999999998899999999999999999999999886432221111111100
Q ss_pred ----------hccccCC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 635 ----------IDRNLKG---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 635 ----------~~~~~~~---~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....... .........+.+++.+||+.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 0012235678899999999999999999999875
No 339
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.6e-34 Score=307.31 Aligned_cols=252 Identities=20% Similarity=0.319 Sum_probs=191.9
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----CC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 481 (689)
.++|...+.||+|+||.||+|... +|..||+|++..... ......+.+|++++++++||||+++++++.... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368888999999999999999965 689999999875422 223356889999999999999999999885432 13
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++|+||+.. +|..+.. ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~-----i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSAG-----IIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEeeC
Confidence 56899999964 7776652 13889999999999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh---------
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF--------- 631 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~--------- 631 (689)
|+++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||............+
T Consensus 162 g~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 162 GLARHADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred CCCcCCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9998654321 12345677999999876 468899999999999999999999996432111100000
Q ss_pred -hHhhccc----c---CCCCC--------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 632 -ENFIDRN----L---KGKFS--------ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 632 -~~~~~~~----~---~~~~~--------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.+..... . ....+ .....++.+++.+|++.||++||++.|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 0 00000 1234568899999999999999999999976
No 340
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.4e-34 Score=291.83 Aligned_cols=244 Identities=21% Similarity=0.268 Sum_probs=188.1
Q ss_pred cccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHH-HhccCCCcceeEeeEEEcCCCCeEEEEEEcC
Q 005586 415 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYL-LTSLRHENIIRLRGFCCSRGRGECFLIYDFA 490 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~ 490 (689)
+.||+|+||.||+|... +|+.||+|++..... ......+..|..+ ....+|+|++++++++.. .+..++|+||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 46999999999999875 689999999875432 1222344555444 445589999999999843 57899999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCC
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 570 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~ 570 (689)
++++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++.....
T Consensus 80 ~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 150 (260)
T cd05611 80 NGGDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQRG-----IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN 150 (260)
T ss_pred CCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEECCCCcEEEeecccceecccc
Confidence 9999999997543 3788999999999999999999987 999999999999999999999999998764331
Q ss_pred ceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccc--cCCCCCHHHH
Q 005586 571 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN--LKGKFSESEA 648 (689)
Q Consensus 571 ~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 648 (689)
....++..|+|||.+.+..++.++||||||+++|||+||+.|+........ +....... .........+
T Consensus 151 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 221 (260)
T cd05611 151 -----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV----FDNILSRRINWPEEVKEFCS 221 (260)
T ss_pred -----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhcccCCCCcccccCC
Confidence 123466789999999888889999999999999999999999964322111 11111111 1111222346
Q ss_pred HHHHHHHHHhccCCCCCCCCH---HHHHHHHHh
Q 005586 649 AKLGKMALVCTHEDPENRPTM---EAVIEELTV 678 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs~---~evl~~L~~ 678 (689)
..+.+++..|++.+|++||++ .|++.+.+.
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~ 254 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF 254 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence 789999999999999999965 566655443
No 341
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.2e-34 Score=292.85 Aligned_cols=252 Identities=18% Similarity=0.315 Sum_probs=196.0
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEeccc---C-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVT---S-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
+|...+.||+|+||.||++... .+..+++|.++.. . ......++..|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE--RDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc--CCceE
Confidence 4667789999999999999875 3444555555432 1 12334567789999999999999999998844 46789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++.........+++..++.++.|++.||.|||+.+ ++|+||||+||++++ +.+||+|||++
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-----i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-----ILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-----ccccCCChhheEeec-CCEeecccCce
Confidence 999999999999999764433456999999999999999999999987 999999999999986 56999999998
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
+....... ......++..|+|||...+..++.++||||||+++|||++|+.|+........ ...... ......+
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~ 226 (260)
T cd08222 153 RLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV----VLRIVE-GPTPSLP 226 (260)
T ss_pred eecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHc-CCCCCCc
Confidence 87643321 11223467789999998888889999999999999999999999864322111 111111 1122334
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.....++.+++.+||+.+|++||++.|++++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 227 ETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred chhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 5566789999999999999999999999986
No 342
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.5e-34 Score=306.68 Aligned_cols=261 Identities=19% Similarity=0.320 Sum_probs=200.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcC--CCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--GRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~~~ 484 (689)
++|+..+.||+|+||.||+|... +|..||+|++..... ......+.+|+.++.+++||||+++++++... .....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 57888899999999999999875 699999999976532 23345778899999999999999999877432 235689
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+. |+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 85 lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHSAN-----VIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred EEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCcEEecccccc
Confidence 9999995 68999986542 3899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCceee---eecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh-------------
Q 005586 565 KLLADDIVFS---VLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE------------- 627 (689)
Q Consensus 565 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~------------- 627 (689)
+......... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 7654322111 112356778999998765 46899999999999999999999999543211000
Q ss_pred ------hhhhhHhhcc-ccCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 628 ------SATFENFIDR-NLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 628 ------~~~~~~~~~~-~~~~~~-----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.....+..+. ...... ....+.++.+++..|++.+|++||++.+++.+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 0001111110 000111 122467899999999999999999999999987664
No 343
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.8e-35 Score=325.29 Aligned_cols=256 Identities=22% Similarity=0.387 Sum_probs=194.9
Q ss_pred HHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCC-----
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----- 479 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----- 479 (689)
+-..+|.+.++||+||||.|||++-+ ||+.||||++.............+|++++++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34467888899999999999999987 899999999988765555678899999999999999999986443210
Q ss_pred --------------------------------------------------------------------------------
Q 005586 480 -------------------------------------------------------------------------------- 479 (689)
Q Consensus 480 -------------------------------------------------------------------------------- 479 (689)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhh
Q 005586 480 ------------------------R--------GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 527 (689)
Q Consensus 480 ------------------------~--------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~y 527 (689)
. ...||=||||+.-.+.++++.+.... .-...+++.++|++||+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHH
Confidence 0 12467788888877777777654211 245567899999999999
Q ss_pred hhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc----C-------------CceeeeecCCCCCCCCCcccc
Q 005586 528 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA----D-------------DIVFSVLKTSAAMGYLAPEYV 590 (689)
Q Consensus 528 LH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~----~-------------~~~~~~~~~~~~~~y~aPE~~ 590 (689)
+|+.+ ||||||||.||+||++..+||+|||+|.... . ......+...||.-|+|||.+
T Consensus 713 IH~~g-----iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 713 IHDQG-----IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHhCc-----eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 99988 9999999999999999999999999998732 0 011123345677889999998
Q ss_pred ccC---CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccC--CCCCHHHHHHHHHHHHHhccCCCCC
Q 005586 591 TTG---RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK--GKFSESEAAKLGKMALVCTHEDPEN 665 (689)
Q Consensus 591 ~~~---~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~dp~~ 665 (689)
.+. +|+.|+|+||+|||++||+. ||...+..+.. +..+-+..+. ..+....+..-.+++.++++.||.+
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~i---L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASI---LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHH---HHhcccCCCCCCcccccccchHHHHHHHHHhcCCCcc
Confidence 764 49999999999999999996 56544433222 2222222221 2234455667789999999999999
Q ss_pred CCCHHHHHHH
Q 005586 666 RPTMEAVIEE 675 (689)
Q Consensus 666 RPs~~evl~~ 675 (689)
|||+.|++..
T Consensus 862 RPtA~eLL~s 871 (1351)
T KOG1035|consen 862 RPTATELLNS 871 (1351)
T ss_pred CCCHHHHhhc
Confidence 9999999864
No 344
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-34 Score=298.68 Aligned_cols=252 Identities=19% Similarity=0.336 Sum_probs=202.8
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccC-CchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.|+..+.||+||.+.||++.-.+.+.+|+|++.... ..+...-|..|+..|.+++ |.+||+|++|-.. .+..|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~--d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT--DGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc--CceEEEEe
Confidence 466678999999999999998888888888876443 3455678999999999995 9999999999755 57899999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||- .-||..+|.+.... ..+| .+..+..|++.++.+.|+.+ |||.||||.|+|+-+ |.+||+|||+|..+
T Consensus 440 E~G-d~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH~~g-----IVHSDLKPANFLlVk-G~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIHQHG-----IVHSDLKPANFLLVK-GRLKLIDFGIANAI 509 (677)
T ss_pred ecc-cccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHHHhc-----eeecCCCcccEEEEe-eeEEeeeechhccc
Confidence 998 56999999887543 3456 67789999999999999988 999999999999975 68999999999988
Q ss_pred cCCcee-eeecCCCCCCCCCccccccC-----------CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh
Q 005586 568 ADDIVF-SVLKTSAAMGYLAPEYVTTG-----------RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 568 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-----------~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 635 (689)
..+... -.....||+.||+||.+... +.+.+|||||+||+||+|+.|+.||..-... ...+..+.
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~---~aKl~aI~ 586 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ---IAKLHAIT 586 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH---HHHHHhhc
Confidence 765432 22345799999999987532 2568999999999999999999999754322 23455566
Q ss_pred ccccCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 DRNLKGKFSES-EAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ~~~~~~~~~~~-~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++...-.|+.- ...++.++|..|+++||.+||+..|++++-
T Consensus 587 ~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 587 DPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred CCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 66544344321 123399999999999999999999999874
No 345
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=277.42 Aligned_cols=245 Identities=19% Similarity=0.383 Sum_probs=195.1
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
...||.|..|.|++++++ .|..+|||.+.....+.+.+.+...+.++..-+ .|.||+-+|||... ..+++.||.|.
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n--~dV~IcMelMs 174 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN--TDVFICMELMS 174 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC--chHHHHHHHHH
Confidence 456999999999999987 589999999998877777778888888877765 89999999999764 56788899984
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
.-++.+|.... .++++...=++...+.+||.||-+.+. |+|||+||+|||+|+.|++|++|||++..+.+..
T Consensus 175 -~C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH~----viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 175 -TCAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred -HHHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhcc----eeecccCccceEEccCCCEEeecccccceeeccc
Confidence 35666665443 247777778899999999999987664 9999999999999999999999999998887654
Q ss_pred eeeeecCCCCCCCCCcccccc---CCCCCcccchhHHHHHHHHHhCCCCcchh-HHHHHhhhhhhHhhc---cccCCCCC
Q 005586 572 VFSVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSS-MRLAAESATFENFID---RNLKGKFS 644 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~---~~~~~ksDV~sfGvvl~elltG~~p~~~~-~~~~~~~~~~~~~~~---~~~~~~~~ 644 (689)
...+..|.+.|||||.+.- .+|+.++|||||||.|+||.||+.||... ..... +..+++ +.+.+.
T Consensus 247 --AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~----ltkvln~ePP~L~~~-- 318 (391)
T KOG0983|consen 247 --AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV----LTKVLNEEPPLLPGH-- 318 (391)
T ss_pred --ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH----HHHHHhcCCCCCCcc--
Confidence 2345667788999999864 46899999999999999999999999652 11111 112222 222221
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..-+..+.+++..|+++|+.+||...+++++-
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 22467899999999999999999999999763
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6e-34 Score=299.38 Aligned_cols=255 Identities=16% Similarity=0.260 Sum_probs=190.1
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
+.+|.|+++.||++.. +|+.||+|++.... .......+.+|++++++++|+||+++++++.. .+..+++|||+++|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~ 84 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYG 84 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEEEEeccCCC
Confidence 3445555555555544 68999999997652 23455789999999999999999999998854 47789999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce-
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV- 572 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 572 (689)
+|.+++..... ..+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.+..+.....
T Consensus 85 ~l~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~-----ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~ 157 (314)
T cd08216 85 SCEDLLKTHFP--EGLPELAIAFILKDVLNALDYIHSKG-----FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR 157 (314)
T ss_pred CHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence 99999986532 24888999999999999999999987 99999999999999999999999998875532211
Q ss_pred -----eeeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhh----Hhhc-----
Q 005586 573 -----FSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE----NFID----- 636 (689)
Q Consensus 573 -----~~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~----~~~~----- 636 (689)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||.............. ..++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchh
Confidence 01122345667999999865 3578999999999999999999999964321111000000 0000
Q ss_pred ---------------cc----cCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 637 ---------------RN----LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 637 ---------------~~----~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+. ...........++.+++.+||+.||++||++.|++++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 00 00011223456789999999999999999999999876543
No 347
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=293.83 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=209.5
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+.||+|.|..|-+|++- .|..||||++.+...+ .....+.+|++.|+-++|||||+||.+. ......|+|.|
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi--DTQTKlyLiLE 97 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--DTQTKLYLILE 97 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh--cccceEEEEEE
Confidence 444578999999999999864 7999999999877643 3346788999999999999999999987 44577999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec-CCCCeEEecccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-QQFNPLIADCGLHKLL 567 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~-~~~~~kl~DfGla~~~ 567 (689)
.-.+|+|.+|+.++.. .+.+....++..||..|+.|+|+.+ +|||||||+||.+- +-|-+|+.|||++..+
T Consensus 98 LGD~GDl~DyImKHe~---Gl~E~La~kYF~QI~~AI~YCHqLH-----VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE---GLNEDLAKKYFAQIVHAISYCHQLH-----VVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred ecCCchHHHHHHhhhc---cccHHHHHHHHHHHHHHHHHHhhhh-----hhcccCCcceeEEeeecCceEeeeccccccC
Confidence 9999999999987653 3888999999999999999999988 89999999999876 5688999999999876
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCC-CcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHH
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 646 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (689)
.++. ......|+..|.|||++.+..|+ +++||||+||+||-|+.|+.||..... ...+..++|-.. ..|.-
T Consensus 170 ~PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND----SETLTmImDCKY--tvPsh 241 (864)
T KOG4717|consen 170 QPGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND----SETLTMIMDCKY--TVPSH 241 (864)
T ss_pred CCcc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc----hhhhhhhhcccc--cCchh
Confidence 5543 23334577889999999999996 689999999999999999999975433 234455555443 46777
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+.++.+++..|+..||.+|-+.+||+..-|.-
T Consensus 242 vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 242 VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred hhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 888999999999999999999999999775543
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.4e-34 Score=293.77 Aligned_cols=247 Identities=19% Similarity=0.278 Sum_probs=189.4
Q ss_pred ccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHH---HHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 416 LLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLY---LLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~---~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
.||+|+||.||+|... +|+.||+|.+...... .....+..|.. .++...||||+++++++.. .+..++||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEec
Confidence 4899999999999875 6899999998764322 22223444443 4445689999999988843 4789999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++|+|.+++.... .++|..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 79 ~~g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~~-----i~H~di~p~nili~~~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 79 MNGGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHNRF-----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (278)
T ss_pred CCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEcCCCCHHHEEECCCCCEEEccCcCccccCc
Confidence 99999999886532 4899999999999999999999987 99999999999999999999999999876543
Q ss_pred CceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.. .....++..|+|||.+.++ .++.++|||||||++|||++|+.||......... ...... .......+...+
T Consensus 150 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~-~~~~~~~~~~~s 223 (278)
T cd05606 150 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTMAVELPDSFS 223 (278)
T ss_pred cC---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHh-hccCCCCCCcCC
Confidence 22 1223577889999998754 6899999999999999999999999653211110 011111 011122333446
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHHHHHhh
Q 005586 649 AKLGKMALVCTHEDPENRP-----TMEAVIEELTVA 679 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RP-----s~~evl~~L~~~ 679 (689)
.++.+++.+|+..+|++|| ++.+++++.+..
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 7899999999999999999 999999876543
No 349
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.7e-34 Score=297.76 Aligned_cols=258 Identities=17% Similarity=0.324 Sum_probs=193.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC------C
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG------R 480 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~ 480 (689)
++|+..+.||+|+||.||+|..+ +++.||||++..... ......+.+|++++++++||||++++++|.... .
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888899999999999999975 689999999865432 222345678999999999999999999885432 2
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++||||+. ++|.+++.... ..+++.+.+.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~-----i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRNK-----ILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHEEECCCCcEEECc
Confidence 35699999996 58888886543 24899999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCcee---eeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhh-
Q 005586 561 CGLHKLLADDIVF---SVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI- 635 (689)
Q Consensus 561 fGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~- 635 (689)
||++......... ......++..|+|||.+.+. .++.++||||||+++|||+||+.|+......... ..+..+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~-~~~~~~~~ 241 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL-TLISQLCG 241 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhC
Confidence 9999866432211 11123356789999987654 4788999999999999999999988643221100 0000000
Q ss_pred ----------------cc-ccCCCC---------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 ----------------DR-NLKGKF---------SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ----------------~~-~~~~~~---------~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+. ...... +......+.+++..|++.||++||+++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 00 000000 001234577999999999999999999999763
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.7e-34 Score=305.02 Aligned_cols=259 Identities=17% Similarity=0.305 Sum_probs=197.4
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC-CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC---CeE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---GEC 483 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~---~~~ 483 (689)
++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|+.++..++|+||+++++++..... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 46888899999999999999875 68999999987542 22334567889999999999999999998754321 357
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
++||||+. ++|.+++.... .+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~-----i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHSAN-----VLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEEcCCCCEEECcCcc
Confidence 99999996 78998886542 4899999999999999999999987 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh--------------
Q 005586 564 HKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES-------------- 628 (689)
Q Consensus 564 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~-------------- 628 (689)
++....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||..........
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 155 ARTTSEKGD-FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred ccccCCCcc-cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 986644321 1122346778999998765 468999999999999999999999985431110000
Q ss_pred -----hhhhHhhcccc---CC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 629 -----ATFENFIDRNL---KG---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 629 -----~~~~~~~~~~~---~~---~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....+.+.... .. ......+.++.+++.+|++.+|++||+++|++++-+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~ 294 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence 00000110000 00 0012345678999999999999999999999988443
No 351
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.63 Aligned_cols=266 Identities=16% Similarity=0.229 Sum_probs=188.2
Q ss_pred HhccCCcccccccCCcceEEEEEecC--CcEEEEEEe--------------ccc--CCchHHHHHHHHHHHHhccCCCcc
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLRD--GTLVAIRSI--------------NVT--SCKSEEAEFVKGLYLLTSLRHENI 468 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l--------------~~~--~~~~~~~~f~~e~~~l~~l~H~ni 468 (689)
..++|...+.||+|+||.||++.++. +..+++|.+ .+. ........|.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999987642 222222211 100 112234578899999999999999
Q ss_pred eeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCc
Q 005586 469 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 547 (689)
Q Consensus 469 v~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~N 547 (689)
|++++++.. .+..++|+|++. ++|.+++...... ...........|+.|++.||+|||+.+ ||||||||+|
T Consensus 226 v~l~~~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-----IiHrDLKP~N 297 (501)
T PHA03210 226 LKIEEILRS--EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-----LIHRDIKLEN 297 (501)
T ss_pred CcEeEEEEE--CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHH
Confidence 999999854 467899999984 6788877543211 112334566789999999999999987 9999999999
Q ss_pred eeecCCCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCc-chhHH--H
Q 005586 548 VLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVL-TSSMR--L 624 (689)
Q Consensus 548 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~-~~~~~--~ 624 (689)
||+++++.+||+|||+++.+............|+..|+|||++.+..++.++|||||||++|||++|+.++ ..... .
T Consensus 298 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 298 IFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred EEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 99999999999999999877554332233346888999999999999999999999999999999988543 21100 0
Q ss_pred HHhhh-----------------hhhHhhccc-cC--C-CCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 625 AAESA-----------------TFENFIDRN-LK--G-KFSE-----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 625 ~~~~~-----------------~~~~~~~~~-~~--~-~~~~-----~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..... .+.+.++.. .. . ..+. .....+.+++.+|++.||++||++.|++++.+.
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 00000 000111100 00 0 0000 112356778899999999999999999988765
Q ss_pred hC
Q 005586 679 AA 680 (689)
Q Consensus 679 ~~ 680 (689)
..
T Consensus 458 ~~ 459 (501)
T PHA03210 458 SA 459 (501)
T ss_pred hc
Confidence 43
No 352
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-33 Score=296.66 Aligned_cols=248 Identities=19% Similarity=0.357 Sum_probs=194.1
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
|...+.||+|+||.||+|... +|..|++|++..... ......+.+|++++++++|||++++++++.+ ....++||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 100 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--EHTAWLVM 100 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEEEE
Confidence 555678999999999999875 689999999875432 2334578899999999999999999999854 47789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+. |++.+++.... ..++|.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 101 e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH~~g-----i~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 101 EYCL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSHN-----MIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred ecCC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 9995 68888876533 34899999999999999999999987 999999999999999999999999998654
Q ss_pred cCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
... ....++..|+|||++. ...++.++|||||||++|||++|+.|+......... .............
T Consensus 172 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~ 242 (313)
T cd06633 172 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTLQS 242 (313)
T ss_pred CCC-----CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCc
Confidence 321 1234677899999974 456889999999999999999999998653221111 1111111111112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 645 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
......+.+++.+|++.+|++||++.+++.+-+.
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~ 276 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLRHDFV 276 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 2334568899999999999999999999987443
No 353
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.3e-34 Score=295.75 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=202.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 484 (689)
++|...+.||+|+||.||+|..+ +|..||+|++..... ......+.+|++++.+++ ||||+++++++. ..+..+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--~~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ--DEENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--CCceEE
Confidence 36777889999999999999976 799999999876432 234467889999999998 999999999884 457899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||+++++|.+++.... .+++..+..|+.|++.||+|||+.+ ++|+||||+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~~-----~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSKG-----IIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred EEEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCHHHeEECCCCCEEecCCccc
Confidence 9999999999999997653 4899999999999999999999987 999999999999999999999999998
Q ss_pred ccccCCce-------------------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHH
Q 005586 565 KLLADDIV-------------------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA 625 (689)
Q Consensus 565 ~~~~~~~~-------------------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~ 625 (689)
........ .......++..|+|||......++.++||||||++++|+++|+.|+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 86644321 11112235678999999988889999999999999999999999986543211
Q ss_pred HhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHH
Q 005586 626 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTM----EAVIEE 675 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~----~evl~~ 675 (689)
.+..... .....+......+.+++.+|++.+|++||++ +|++++
T Consensus 230 ----~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 ----TFQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ----HHHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1122221 1223444456789999999999999999999 887765
No 354
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.3e-34 Score=302.23 Aligned_cols=265 Identities=20% Similarity=0.297 Sum_probs=201.8
Q ss_pred CHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEc
Q 005586 400 NLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCS 477 (689)
Q Consensus 400 ~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 477 (689)
...++..++++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.++.+++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34567778899999999999999999999864 789999999975432 2234578899999999999999999998743
Q ss_pred CC----CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC
Q 005586 478 RG----RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 553 (689)
Q Consensus 478 ~~----~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~ 553 (689)
.. ....+++++++ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~NIll~~~ 156 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNED 156 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCChHHEEEcCC
Confidence 21 23467888877 78998887643 3899999999999999999999987 9999999999999999
Q ss_pred CCeEEecccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh---
Q 005586 554 FNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA--- 629 (689)
Q Consensus 554 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~--- 629 (689)
+.+||+|||+++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.|+...........
T Consensus 157 ~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 157 CELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CCEEEecccccccccccc----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999999988654321 22346778999998766 4678999999999999999999999853211100000
Q ss_pred --------hh--------hHhh---ccccCCCC---CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 630 --------TF--------ENFI---DRNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 630 --------~~--------~~~~---~~~~~~~~---~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.. ..++ .......+ ......++.+++..|++.||++||++.+++.+-+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 00 0000 00000000 011245688999999999999999999999886544
No 355
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9.6e-34 Score=299.46 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=199.4
Q ss_pred HHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 404 VESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 404 l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
+..++++|+..+.||+|+||.||+|... +|+.||+|++..... ....+.+.+|++++.+++||||+++++++... ..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~ 83 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LE 83 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CC
Confidence 3456788999999999999999999865 799999998865322 23446788999999999999999999988543 35
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++|+||+ +++|.++++.. .+++.....++.|+++||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~~-----iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHSAG-----VVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEeECCCCCEEeCcc
Confidence 688999999 56899888643 3788888899999999999999987 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh---h--------
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES---A-------- 629 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~---~-------- 629 (689)
|+++...... ....++..|+|||++.+ ..++.++|||||||++|||+||+.||.......... .
T Consensus 153 g~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd07856 153 GLARIQDPQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228 (328)
T ss_pred ccccccCCCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9987653321 12345678999998766 568999999999999999999999985432110000 0
Q ss_pred --------hhhHhhcc-ccCCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 630 --------TFENFIDR-NLKGKFSE-----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 630 --------~~~~~~~~-~~~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+++.. ......+. .....+.+++.+|++.+|++||++.+++.+-+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~ 291 (328)
T cd07856 229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291 (328)
T ss_pred HHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence 00000000 00111111 234678999999999999999999999988544
No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.6e-34 Score=302.49 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=200.6
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC---CCeEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---RGECF 484 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~---~~~~~ 484 (689)
+|...+.||+|+||.||+|+.. +|..||+|++..... ....+.+.+|++++++++|+||+++++++.... ....+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677889999999999999976 589999999876542 334567999999999999999999999885432 13689
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||++ ++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||.||++++++.++|+|||++
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~g-----i~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSAN-----VIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 58998887543 5899999999999999999999987 999999999999999999999999999
Q ss_pred ccccCCce--eeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh----------
Q 005586 565 KLLADDIV--FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF---------- 631 (689)
Q Consensus 565 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~---------- 631 (689)
........ .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.............
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 87654321 111223456779999999887 78999999999999999999999986432211100000
Q ss_pred ---------hHhhcc-ccCCC-----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 632 ---------ENFIDR-NLKGK-----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 632 ---------~~~~~~-~~~~~-----~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.+.+.. ..... ........+.+++.+||+.+|++||++.+++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 293 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLA 293 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHH
Confidence 000000 00000 0112356789999999999999999999999885443
No 357
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.1e-33 Score=296.61 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=194.0
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCch-HHHHHHHHHHHHhccCCCcceeEeeEEEcCC------
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRLRGFCCSRG------ 479 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------ 479 (689)
.++|...+.||+|+||.||+|..+ +++.||+|++....... ....+.+|++++.+++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 357888899999999999999976 68999999986543222 2346778999999999999999999875432
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
....++|+||++. +|...+.... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~~-----i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHENH-----ILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCCCEEEC
Confidence 2357999999964 7877776532 24899999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceee----------eecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh
Q 005586 560 DCGLHKLLADDIVFS----------VLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 628 (689)
Q Consensus 560 DfGla~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~ 628 (689)
|||+++......... .....++..|+|||.+.+. .++.++|||||||++|||++|+.|+..........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~ 237 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999998654322111 1122346679999987654 57899999999999999999999986432211111
Q ss_pred hhhh-----------------HhhccccCCCCC-------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 629 ATFE-----------------NFIDRNLKGKFS-------ESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 629 ~~~~-----------------~~~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+. ...+.......+ ......+.+++.+|++.||++||++.|++.+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~ 309 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence 0000 000000000011 11235688999999999999999999998753
No 358
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=9.2e-34 Score=292.85 Aligned_cols=254 Identities=21% Similarity=0.387 Sum_probs=196.4
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|+..+.||+|+||.||+|+.. +++.||+|.+..... ......+..|+.++++++|+|++++++++.+ .+..++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCceEEEec
Confidence 445678999999999999976 599999999986542 2234678899999999999999999999854 478999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|++ ++|.+++.... ..+++..+..++.++++||+|||+.+ |+||||+|+||++++++.+||+|||+++...
T Consensus 79 ~~~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 79 YCD-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSHR-----ILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred CcC-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 997 59999998653 24899999999999999999999987 9999999999999999999999999998764
Q ss_pred CCceeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh-----------hhhHhh-
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA-----------TFENFI- 635 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~-----------~~~~~~- 635 (689)
.... .......+..|+|||.+.+. .++.++|||||||++|||++|+.|+........... .+..+.
T Consensus 150 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 150 IPLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred CCcc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 4321 11223345679999998776 789999999999999999999999865322111000 000000
Q ss_pred ----ccccCC-------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 636 ----DRNLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 636 ----~~~~~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
+..... .........+.+++..|++.+|++||++.+++.+-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p 280 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence 000000 00011256799999999999999999999998764
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.4e-33 Score=300.14 Aligned_cols=257 Identities=21% Similarity=0.330 Sum_probs=196.7
Q ss_pred HHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC---
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR--- 480 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~--- 480 (689)
...++|+..+.||+|+||.||+|... +|..||||++..... ......+.+|++++.+++||||+++++++.....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 34678999999999999999999865 799999999865332 2234568899999999999999999998854321
Q ss_pred -CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 481 -GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
...++||||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~~g-----i~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHAAG-----IIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEe
Confidence 2468999999 77999888642 3899999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhh--------
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT-------- 630 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~-------- 630 (689)
|||+++...... ....++..|+|||.+.+ ..++.++|||||||++||+++|+.||............
T Consensus 161 dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07880 161 DFGLARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS 236 (343)
T ss_pred ecccccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999998664322 22345778999998875 45889999999999999999999999643211110000
Q ss_pred --hh---------Hhhcc--ccCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 631 --FE---------NFIDR--NLKG----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 631 --~~---------~~~~~--~~~~----~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+. ..... .... ........++.+++.+|++.||++||++.+++++-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~ 300 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00 00000 0000 001123456889999999999999999999997643
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.7e-33 Score=297.24 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=191.4
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCch-------------HHHHHHHHHHHHhccCCCcceeEeeEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-------------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRG 479 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-------------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~ 479 (689)
.+.||+|+||.||+|..+ +++.||||++....... ....+.+|++++.+++|+||+++++++..
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 91 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE-- 91 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec--
Confidence 467999999999999975 68999999986543211 01257899999999999999999999854
Q ss_pred CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEe
Q 005586 480 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 559 (689)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~ 559 (689)
.+..++||||++ |+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~-----i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHKWY-----FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecccccHHHeEECCCCCEEEC
Confidence 468899999996 69999986532 3889999999999999999999987 9999999999999999999999
Q ss_pred cccccccccCCce-------------eeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHH
Q 005586 560 DCGLHKLLADDIV-------------FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLA 625 (689)
Q Consensus 560 DfGla~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~ 625 (689)
|||+++....... .......++..|+|||++.+. .++.++|||||||++|||+||+.|+.......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999986652110 011122346679999998764 46899999999999999999999986543221
Q ss_pred HhhhhhhHhhccc---------------cCCC-------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 626 AESATFENFIDRN---------------LKGK-------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 626 ~~~~~~~~~~~~~---------------~~~~-------~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
.........-.+. .... .......++.+++..|++.+|++||++.|++.+.+.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 1111000000000 0000 011225678899999999999999999999987654
No 361
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=280.71 Aligned_cols=248 Identities=19% Similarity=0.323 Sum_probs=192.8
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
...||.|+||+|+|-.++ .|+..|||+++......+++++..|.+...+- +.||||+++|.+..+ +..++.||.|.
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E--GdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE--GDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC--CceeeeHHHHh
Confidence 357999999999999876 79999999999887777888999999875555 799999999998664 67999999994
Q ss_pred CCCHHHHh---hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 492 KGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 492 ~gsL~~~L---~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
-||..+- +... ...+++.-.-+|+.....||.||-+.. .|||||+||+|||||..|.+|++|||++..+.
T Consensus 147 -~SlDklYk~vy~vq--~~~ipE~Ilg~ItvatV~AL~yLK~~l----kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 147 -ISLDKLYKRVYSVQ--KSRIPENILGHITVATVDALDYLKEEL----KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred -hhHHHHHHHHHHHH--hccCcHhhhhheeeeehhHHHHHHHHh----hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 4665543 2222 234788877889999999999998654 39999999999999999999999999998876
Q ss_pred CCceeeeecCCCCCCCCCcccccc--CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc--c-ccCCC-
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID--R-NLKGK- 642 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~- 642 (689)
+... .....|...|||||.+.. ..|+-+|||||+|+.|||+.||+.|+..+...-.. +..+.. + .+...
T Consensus 220 ~SiA--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeq---l~~Vv~gdpp~l~~~~ 294 (361)
T KOG1006|consen 220 DSIA--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQ---LCQVVIGDPPILLFDK 294 (361)
T ss_pred HHHH--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHH---HHHHHcCCCCeecCcc
Confidence 5432 122345566999999864 34899999999999999999999999876542211 111111 1 11111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 643 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 643 ~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
-....+..+.+.+..|+.+|-..||++.++.++
T Consensus 295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 112356789999999999999999999998764
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.9e-33 Score=299.16 Aligned_cols=258 Identities=18% Similarity=0.315 Sum_probs=193.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC-------
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR------- 480 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~------- 480 (689)
.+|...+.||+|+||.||+|... +|..||+|++..... ...+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46788899999999999999875 689999999876543 345678899999999999999999987643221
Q ss_pred -----CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec-CCC
Q 005586 481 -----GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-QQF 554 (689)
Q Consensus 481 -----~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~-~~~ 554 (689)
...++||||++ ++|.+++... .+++.....++.|+++||.|||+.+ |+||||||+||+++ +++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g-----ivH~dikp~Nili~~~~~ 152 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSAN-----VLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEEcCCCc
Confidence 35789999997 5898888542 3889999999999999999999987 99999999999998 456
Q ss_pred CeEEecccccccccCCceee--eecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh
Q 005586 555 NPLIADCGLHKLLADDIVFS--VLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 631 (689)
Q Consensus 555 ~~kl~DfGla~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~ 631 (689)
.+|++|||+++.+....... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||.............
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 78999999998654321111 112345678999998654 467889999999999999999999996432111100000
Q ss_pred -----------h-------Hhhc-cccCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 632 -----------E-------NFID-RNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 632 -----------~-------~~~~-~~~~~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
. .... .......+ .....++.+++..|++.||++||++.|++++-+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~ 303 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcc
Confidence 0 0000 00000001 1234578899999999999999999999977544
No 363
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=302.37 Aligned_cols=199 Identities=25% Similarity=0.421 Sum_probs=174.3
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----CCeEEEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RGECFLIYD 488 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~~~lV~e 488 (689)
.+.||+|+||.||+|+.+ .|+.||||.++........+...+|+++|++++|+|||++++.-.... .+...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 467999999999999965 799999999998877777888999999999999999999998653333 456889999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec--CCCC--eEEeccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQFN--PLIADCGLH 564 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~--~~~~--~kl~DfGla 564 (689)
||.+|||...|...+. ...|++.+.+.+..++..||.|||+++ |+||||||.||++- ++++ -||+|||.|
T Consensus 98 yC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn~-----IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLRENG-----IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHcC-----ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999987653 245999999999999999999999887 99999999999994 3344 499999999
Q ss_pred ccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcch
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTS 620 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~ 620 (689)
|.+.++. ......||..|.+||.+.. +.|+..+|.|||||++||.+||..||..
T Consensus 172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 9998876 4455679999999999984 7899999999999999999999999953
No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.1e-33 Score=282.63 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=195.2
Q ss_pred cccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 417 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
||+|+||.||++... +++.+|+|++...... .....+..|++++++++||||+++++.+. .....++||||++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ--TEEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee--cCCeeEEEEecCCCC
Confidence 689999999999976 5899999998765432 24568899999999999999999998873 457899999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|.+++.... .+++.....++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 79 ~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~~-----~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~- 148 (250)
T cd05123 79 ELFSHLSKEG----RFSEERARFYAAEIVLALEYLHSLG-----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS- 148 (250)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCcceEEEcCCCcEEEeecCcceecccCCC-
Confidence 9999997653 3899999999999999999999977 99999999999999999999999999887644321
Q ss_pred eeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
......++..|+|||...+...+.++|+||||+++||+++|+.|+...... .....+.. ....++......+.+
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~--~~~~~~~~~~~~l~~ 222 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK----EIYEKILK--DPLRFPEFLSPEARD 222 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhc--CCCCCCCCCCHHHHH
Confidence 122344677899999998888899999999999999999999999643221 11111211 122334444678899
Q ss_pred HHHHhccCCCCCCCCH---HHHHHH
Q 005586 654 MALVCTHEDPENRPTM---EAVIEE 675 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs~---~evl~~ 675 (689)
++.+|+..||++||++ .+++++
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHHhC
Confidence 9999999999999999 565544
No 365
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=299.93 Aligned_cols=251 Identities=18% Similarity=0.283 Sum_probs=199.5
Q ss_pred ccccccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 414 VNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
+..||.|+||.||+|+-++ +...|.|++.... ..+..+|+-||++|+.+.||+||+|++.|+.+ +.++++.|||.|
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nkLwiliEFC~G 113 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NKLWILIEFCGG 113 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--CceEEEEeecCC
Confidence 3568999999999999774 4556677776544 45567899999999999999999999866544 678999999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 572 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 572 (689)
|.+...+-.-+ ..|...++.-++.+++.||.|||+.. |||||||+-|||++-+|.++++|||.+.......
T Consensus 114 GAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~~-----iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~- 184 (1187)
T KOG0579|consen 114 GAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQN-----IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR- 184 (1187)
T ss_pred chHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhcc-----hhhhhccccceEEEecCcEeeecccccccchhHH-
Confidence 99998876543 35899999999999999999999987 9999999999999999999999999986443211
Q ss_pred eeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHH
Q 005586 573 FSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 647 (689)
Q Consensus 573 ~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (689)
.......||+.|||||++. ..+|+.++||||||+.|.||..+.+|........+... +..--.+.+ -.|...
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK-iaKSePPTL--lqPS~W 261 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPPTL--LQPSHW 261 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH-HhhcCCCcc--cCcchh
Confidence 1223456899999999864 56899999999999999999999998754322211111 111111222 235667
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 648 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 648 ~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
...+.++..+|+..+|..||+.++++++.+..
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 88899999999999999999999999987655
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5e-33 Score=294.77 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=193.6
Q ss_pred cCCcccccccCCcceEEEEEec-C--CcEEEEEEecccCC-chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcC--CCCe
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-D--GTLVAIRSINVTSC-KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR--GRGE 482 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~--~~~~ 482 (689)
+|...+.||+|+||.||++... + +..||+|++..... ....+.+.+|++++.++ +||||+++++++... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3667789999999999999975 4 78999999875432 22346788999999999 599999999875322 2245
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.++++||+. ++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~g-----ivH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHSAN-----VLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHeEEcCCCCEEeCcCC
Confidence 788899985 68999986532 4899999999999999999999987 9999999999999999999999999
Q ss_pred ccccccCCcee---eeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh----------
Q 005586 563 LHKLLADDIVF---SVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES---------- 628 (689)
Q Consensus 563 la~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~---------- 628 (689)
+++........ ......++..|+|||++.+ ..++.++|||||||++|||++|+.|+..........
T Consensus 151 ~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (332)
T cd07857 151 LARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD 230 (332)
T ss_pred CceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC
Confidence 99866432211 1122356788999998765 468999999999999999999999986432110000
Q ss_pred -hhhhHhhcc-----------ccCCC---CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 629 -ATFENFIDR-----------NLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 629 -~~~~~~~~~-----------~~~~~---~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+.++.++ ..... ........+.+++.+|++.||++||++.|++++-+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 000000000 00000 011124678999999999999999999999987544
No 367
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=296.44 Aligned_cols=249 Identities=24% Similarity=0.403 Sum_probs=205.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 486 (689)
..|.....||+|.|+.|..|+.. .|..||||.+.+.... ...+.+.+|+++|..++|||||+++.+.. ....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~--t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE--TEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee--ecceeEEE
Confidence 45667789999999999999976 6999999999877643 23356899999999999999999999884 45789999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|||..+|.++++|..+.. +.......+..|+.+|++|||+.. |+|||||++||||+.++++||+|||++..
T Consensus 134 ~eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k~-----ivHrdLk~eNilL~~~mnikIaDfgfS~~ 204 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSKN-----IVHRDLKAENILLDENMNIKIADFGFSTF 204 (596)
T ss_pred EEeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhcc-----eeccccchhhcccccccceeeecccccee
Confidence 999999999999987754 445777889999999999999988 99999999999999999999999999988
Q ss_pred ccCCceeeeecCCCCCCCCCccccccCCC-CCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCC--C
Q 005586 567 LADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK--F 643 (689)
Q Consensus 567 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~ 643 (689)
+..... .....|++.|.|||++.+.+| ++++|+||+||++|-|+.|..||++.. +.+.-++.++++ +
T Consensus 205 ~~~~~~--lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~--------lk~Lr~rvl~gk~rI 274 (596)
T KOG0586|consen 205 FDYGLM--LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN--------LKELRPRVLRGKYRI 274 (596)
T ss_pred eccccc--ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc--------cccccchheeeeecc
Confidence 764432 223457788999999999887 589999999999999999999997542 122222233332 2
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.-...+..+++++.+..+|.+|++++++.++-|.
T Consensus 275 p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 275 PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred cceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 33345678899999999999999999999877543
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.2e-33 Score=300.93 Aligned_cols=256 Identities=21% Similarity=0.322 Sum_probs=196.4
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC----
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---- 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~---- 480 (689)
..++|...+.||+|+||.||+|+.. ++..||+|++..... ......+.+|+.++++++|||++++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567888999999999999999986 688999999875422 2234567889999999999999999987643221
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEec
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 560 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~D 560 (689)
...++|+||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g-----i~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHSAG-----IIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEECCCCCEEEcc
Confidence 2489999999 67999998652 4899999999999999999999987 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh--------
Q 005586 561 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF-------- 631 (689)
Q Consensus 561 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~-------- 631 (689)
||++...... .....++..|+|||.+.+ ..++.++|||||||++||++||+.||.............
T Consensus 162 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 162 FGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred cccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 9999866433 122345677999998765 367899999999999999999999986432211100000
Q ss_pred -----------hHhhcccc---CCCC---CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 632 -----------ENFIDRNL---KGKF---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 632 -----------~~~~~~~~---~~~~---~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
..++.... +..+ ....+.++.+++.+|++.+|++|||+.||+++-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~ 300 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY 300 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence 00000000 0000 0123568999999999999999999999998743
No 369
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.4e-34 Score=275.66 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=196.0
Q ss_pred cCCcccccccCCcceEEEEEec---C--CcEEEEEEecccCCchH-HHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR---D--GTLVAIRSINVTSCKSE-EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~~~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
.|.....||+|.||.||+|+-+ + ...+|+|+++.++.... .....+||.+++.++|||++.|..++... +..+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~~v 103 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-DKKV 103 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-CceE
Confidence 4777889999999999999643 2 33799999987654322 25678999999999999999999988654 5789
Q ss_pred EEEEEcCCCCCHHHHhhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC----CCeEE
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGS-SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ----FNPLI 558 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~----~~~kl 558 (689)
++++||.+. ||...++-.+.. ...++-.....|+.||+.|+.|||++. |+||||||.|||+..+ |.+||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-----vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-----VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-----eeeccCCcceEEEeccCCccCeeEe
Confidence 999999975 899888765432 245888899999999999999999998 9999999999999877 89999
Q ss_pred ecccccccccCCc--eeeeecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHH---------HH
Q 005586 559 ADCGLHKLLADDI--VFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRL---------AA 626 (689)
Q Consensus 559 ~DfGla~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~---------~~ 626 (689)
+|+|++|.+.+.- ......+..|++|+|||.+.+. .||.+.||||.||++.||+|-++-|...... ..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999999886532 2233456678999999998874 6899999999999999999977655321100 00
Q ss_pred hhhhh------------------------hHhhccccCCCC-CH-------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 005586 627 ESATF------------------------ENFIDRNLKGKF-SE-------SEAAKLGKMALVCTHEDPENRPTMEAVIE 674 (689)
Q Consensus 627 ~~~~~------------------------~~~~~~~~~~~~-~~-------~~~~~l~~l~~~Cl~~dp~~RPs~~evl~ 674 (689)
..+++ .++-.... ... -. .-.....++...++..||.+|.|+++.++
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~-~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYY-DNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhc-CcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 00000 00000000 000 00 01223788999999999999999999998
Q ss_pred HHH
Q 005586 675 ELT 677 (689)
Q Consensus 675 ~L~ 677 (689)
+.-
T Consensus 337 h~y 339 (438)
T KOG0666|consen 337 HPY 339 (438)
T ss_pred ccc
Confidence 853
No 370
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-32 Score=300.22 Aligned_cols=266 Identities=18% Similarity=0.274 Sum_probs=188.0
Q ss_pred HhccCCcccccccCCcceEEEEEe-----------------cCCcEEEEEEecccCCchHHHH--------------HHH
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTL-----------------RDGTLVAIRSINVTSCKSEEAE--------------FVK 455 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~~~~~~--------------f~~ 455 (689)
..++|...++||+|+||.||+|.+ .+++.||||++..... ...++ +..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~-~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ-GVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch-hhHHHHHhhhhhhhcccchhHH
Confidence 356899999999999999999964 2457899999875432 22223 344
Q ss_pred HHHHHhccCCCcc-----eeEeeEEEcC------CCCeEEEEEEcCCCCCHHHHhhhcCCC-------------------
Q 005586 456 GLYLLTSLRHENI-----IRLRGFCCSR------GRGECFLIYDFAPKGKLSKYLDQEEGS------------------- 505 (689)
Q Consensus 456 e~~~l~~l~H~ni-----v~l~g~~~~~------~~~~~~lV~e~~~~gsL~~~L~~~~~~------------------- 505 (689)
|+.++.+++|.++ +++++||... ..++.++||||+++|+|.++++...+.
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6777888877655 6778887532 235689999999999999999753210
Q ss_pred -CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceeeeecCCCCCCC
Q 005586 506 -SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 584 (689)
Q Consensus 506 -~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y 584 (689)
...++|..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.+.............++.|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~-----ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y 376 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIG-----IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRY 376 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcce
Confidence 123578889999999999999999887 99999999999999999999999999976644322222223346789
Q ss_pred CCccccccCCC----------------------CCcccchhHHHHHHHHHhCCC-CcchhHHHHHhh----hh---hhHh
Q 005586 585 LAPEYVTTGRF----------------------TERSDIFAFGVIILQILTGSL-VLTSSMRLAAES----AT---FENF 634 (689)
Q Consensus 585 ~aPE~~~~~~~----------------------~~ksDV~sfGvvl~elltG~~-p~~~~~~~~~~~----~~---~~~~ 634 (689)
+|||.+..... ..+.||||+||+++||++|.. |+.......... .. +...
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 99998754321 235799999999999999985 554321111100 01 1111
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHh
Q 005586 635 IDRNLKGKFSESEAAKLGKMALVCTHEDP---ENRPTMEAVIEELTV 678 (689)
Q Consensus 635 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp---~~RPs~~evl~~L~~ 678 (689)
......-...........+++.+++..+| .+|+|++|+++|.+.
T Consensus 457 ~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 457 KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 11111111123345678899999999766 689999999998765
No 371
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=312.15 Aligned_cols=259 Identities=19% Similarity=0.275 Sum_probs=212.3
Q ss_pred HHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcC
Q 005586 402 EEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR 478 (689)
Q Consensus 402 ~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~ 478 (689)
.++.--.++|.+.++||+|+||.|..++++ .++.||+|++++.. ...+..-|..|-.+|..-+.+-||++.-.| .
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--Q 145 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--Q 145 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh--c
Confidence 445555678999999999999999999986 68999999998632 133456799999999999999999997555 5
Q ss_pred CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEE
Q 005586 479 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 558 (689)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl 558 (689)
+..+.|+|||||+||||-.++.... .++......++.+|..||+-+|+.| +|||||||.|||||.+|++||
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~mg-----yVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSMG-----YVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhcc-----ceeccCCcceeEecccCcEee
Confidence 5689999999999999999998764 3888888899999999999999999 899999999999999999999
Q ss_pred ecccccccccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH
Q 005586 559 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~ 633 (689)
+|||-+-.+..+.........||+.|++||++.. +.|+..+|+||+||++|||+.|..||+...-. ..+..
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv----eTY~K 292 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV----ETYGK 292 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH----HHHHH
Confidence 9999998887665556666789999999999752 57899999999999999999999999865433 23444
Q ss_pred hhccccCCCCC--HHHHHHHHHHHHHhccCCCCCCCC---HHHHHHHH
Q 005586 634 FIDRNLKGKFS--ESEAAKLGKMALVCTHEDPENRPT---MEAVIEEL 676 (689)
Q Consensus 634 ~~~~~~~~~~~--~~~~~~l~~l~~~Cl~~dp~~RPs---~~evl~~L 676 (689)
+++..-.-.+| .+.+.+..+++..-+. +|+.|-. +.++-.|.
T Consensus 293 Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 293 IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 44443222344 3456778888877554 8888888 88887664
No 372
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=322.75 Aligned_cols=255 Identities=21% Similarity=0.346 Sum_probs=202.6
Q ss_pred HHhccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeE
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 483 (689)
..+-+++....||.|.||.||-|.. .+|...|+|.++.... .+......+|+.++..++|||+|+++|+-.. ++..
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH--Rekv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH--REKV 1309 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec--HHHH
Confidence 3455677788999999999999984 5799999999876543 3334678899999999999999999998744 5788
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccc
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 563 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGl 563 (689)
+|.||||++|+|.+.+...+. .++..-..+-.|++.|++|||+.| ||||||||.||+|+.+|.+|.+|||.
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~g-----IVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEHG-----IVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhcC-----ceecCCCccceeeecCCcEEeecccc
Confidence 999999999999999975432 455555667889999999999988 99999999999999999999999999
Q ss_pred cccccCCcee---eeecCCCCCCCCCccccccCC---CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc
Q 005586 564 HKLLADDIVF---SVLKTSAAMGYLAPEYVTTGR---FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 564 a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~---~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|+........ ......||+-|||||++.+.. -.-+.||||+|||++||+||++|+..... .| .++-. +.-
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--e~-aIMy~-V~~ 1456 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--EW-AIMYH-VAA 1456 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--hh-HHHhH-Hhc
Confidence 9877654211 122346888899999997643 35689999999999999999999853211 01 11111 112
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 638 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 638 ~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
..++.+|+..+.+-.+++..|+..||++|.++.|++++
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 34456777788888999999999999999999888875
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-32 Score=315.55 Aligned_cols=146 Identities=23% Similarity=0.344 Sum_probs=128.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
++|...+.||+|+||.||+|... +++.||||+++.... ......+..|+.++..++||||+++++++.. ....++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~l 81 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVYL 81 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEEE
Confidence 46778899999999999999986 689999999975432 2234678899999999999999999988744 468999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++++|.++++... .+++...+.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~g-----IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRHG-----IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999997543 3788999999999999999999987 9999999999999999999999999986
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.6e-33 Score=278.01 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=175.4
Q ss_pred CCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHH
Q 005586 420 GNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKY 498 (689)
Q Consensus 420 G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~ 498 (689)
|.||.||+++.+ +|+.||+|++.... .+.+|...+....||||+++++++.. .+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCCCCCHHHH
Confidence 899999999975 78999999987543 23445555666789999999998854 4789999999999999999
Q ss_pred hhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceeeeecC
Q 005586 499 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 578 (689)
Q Consensus 499 L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 578 (689)
+.... .+++.....++.|+++||+|||+.+ |+||||||+||++++++.++++|||.+..+.... ...
T Consensus 76 l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~ 142 (237)
T cd05576 76 ISKFL----NIPEECVKRWAAEMVVALDALHREG-----IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGE 142 (237)
T ss_pred HHHhc----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccC
Confidence 97643 3899999999999999999999987 9999999999999999999999999887654421 123
Q ss_pred CCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHh
Q 005586 579 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVC 658 (689)
Q Consensus 579 ~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C 658 (689)
.++..|+|||...+..++.++||||+|+++|||++|+.|+....... ........+......+.+++.+|
T Consensus 143 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 143 AVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEWVSEEARSLLQQL 212 (237)
T ss_pred CcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcccCCHHHHHHHHHH
Confidence 34567999999988889999999999999999999998764321100 00001112333456789999999
Q ss_pred ccCCCCCCCCH
Q 005586 659 THEDPENRPTM 669 (689)
Q Consensus 659 l~~dp~~RPs~ 669 (689)
++.||++||++
T Consensus 213 l~~dp~~R~~~ 223 (237)
T cd05576 213 LQFNPTERLGA 223 (237)
T ss_pred ccCCHHHhcCC
Confidence 99999999996
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=279.66 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=199.3
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHH------HHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEE------AEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~------~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
++|-..++||+|||+.||+|+. ...+.||||+-..+....++ +...+|.++-+.+.||.||++|+|+.-. .+
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-td 541 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-TD 541 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-cc
Confidence 4555678999999999999985 46889999998766542222 4567889999999999999999998653 56
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec---CCCCeEE
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLI 558 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~---~~~~~kl 558 (689)
..+-|.||+++-+|.-||+.+. .+++.+...|+.||..||.||.+. +|||||-||||.||||- ..|++||
T Consensus 542 sFCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL~YLNEi---kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNALKYLNEI---KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred cceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHHHHHhcc---CCCeeeeccCCccEEEecCcccceeEe
Confidence 7899999999999999998765 388999999999999999999875 59999999999999995 4688999
Q ss_pred ecccccccccCCceee------eecCCCCCCCCCcccccc----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh
Q 005586 559 ADCGLHKLLADDIVFS------VLKTSAAMGYLAPEYVTT----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 628 (689)
Q Consensus 559 ~DfGla~~~~~~~~~~------~~~~~~~~~y~aPE~~~~----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~ 628 (689)
.||||++.|.++.+.. .....||.+|++||.+.- .+.+.|+||||.||++|..+.|+.||......-. .
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd-I 693 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD-I 693 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH-H
Confidence 9999999998765432 234568999999998643 3578999999999999999999999975422110 0
Q ss_pred hhhhHhhccccCCCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 629 ATFENFIDRNLKGKFS--ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 629 ~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
....-++... .-.+| +..+.+...++.+|++.--++|....++..+
T Consensus 694 LqeNTIlkAt-EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 694 LQENTILKAT-EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred Hhhhchhcce-eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 0000011110 00111 2345678899999999999999988887654
No 376
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-33 Score=270.15 Aligned_cols=250 Identities=24% Similarity=0.334 Sum_probs=199.0
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEE
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 484 (689)
.++|...++||+|.||+|-+++-+ .|+.+|+|+++++-. +.+...-..|-++|+..+||.+..|.--+ ...+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF--Qt~drlC 244 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF--QTQDRLC 244 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh--ccCceEE
Confidence 357888899999999999999876 799999999987643 34445667889999999999998885444 4467899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+||||..+|.|.-+|...+ .+++.....+-.+|..||.|||+.+ ||.||+|-+|.|||+||++||+|||++
T Consensus 245 FVMeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~~-----ivYRDlKLENLlLDkDGHIKitDFGLC 315 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSRN-----IVYRDLKLENLLLDKDGHIKITDFGLC 315 (516)
T ss_pred EEEEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhCC-----eeeeechhhhheeccCCceEeeecccc
Confidence 9999999999999987654 3777777788999999999999987 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 644 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (689)
+.--... .......||+.|+|||++....|...+|.|..|||||||+.|+.||+...... -++-++-..+ .+|
T Consensus 316 KE~I~~g-~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k----LFeLIl~ed~--kFP 388 (516)
T KOG0690|consen 316 KEEIKYG-DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK----LFELILMEDL--KFP 388 (516)
T ss_pred hhccccc-ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH----HHHHHHhhhc--cCC
Confidence 8432211 12334568999999999999999999999999999999999999997643221 1222222222 355
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 005586 645 ESEAAKLGKMALVCTHEDPENRP-----TMEAVIEE 675 (689)
Q Consensus 645 ~~~~~~l~~l~~~Cl~~dp~~RP-----s~~evl~~ 675 (689)
...+.+...+..--+.+||.+|. .+.||.++
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 55667788888888999999994 35555443
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.5e-33 Score=292.43 Aligned_cols=248 Identities=19% Similarity=0.282 Sum_probs=200.8
Q ss_pred HhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEE
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 484 (689)
.++.|.....+|.|+|+.|-++... +++..+||++..... +-.+|+.++... +||||+++.+.+ .+..+.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~--~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVY--EDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeeccee--cCCceee
Confidence 3566777788999999999999875 688999999976521 233566565555 799999999998 5568899
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee-cCCCCeEEecccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI-DQQFNPLIADCGL 563 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl-~~~~~~kl~DfGl 563 (689)
+|||++.+|-+.+.+..... .. ..+..|+.+++.|+.|||+.| +|||||||+|||+ ++.++++|+|||.
T Consensus 393 ~v~e~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~g-----vvhRDLkp~NIL~~~~~g~lrltyFG~ 462 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQG-----VVHRDLKPGNILLDGSAGHLRLTYFGF 462 (612)
T ss_pred eeehhccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhcC-----eeecCCChhheeecCCCCcEEEEEech
Confidence 99999999877777765431 23 677789999999999999988 9999999999999 6999999999999
Q ss_pred cccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCC
Q 005586 564 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 643 (689)
Q Consensus 564 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (689)
++....+ .....-|..|.|||+.....|++++|+||+|++||||++|+.|+...... .++..+...+.+
T Consensus 463 a~~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~ 531 (612)
T KOG0603|consen 463 WSELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKF 531 (612)
T ss_pred hhhCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCcc
Confidence 9988765 22234567799999999999999999999999999999999999654322 223333334455
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh-hCCc
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV-AAPV 682 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~-~~p~ 682 (689)
....+..+.+|+..|++.||.+||+|.++..+-+. ..|.
T Consensus 532 s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t 571 (612)
T KOG0603|consen 532 SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT 571 (612)
T ss_pred ccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence 57778899999999999999999999999988777 4443
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=2e-32 Score=263.21 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=197.8
Q ss_pred hccCCc-ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEc--CCCCe
Q 005586 408 TQCFSE-VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCS--RGRGE 482 (689)
Q Consensus 408 t~~f~~-~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~--~~~~~ 482 (689)
|++|+. .++||-|-.|.|-.+..+ +|+.+|+|++... ....+|+++--.. .|||||.++++|.. .+...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 444544 368999999999999876 7899999998653 2345677654444 69999999998732 23456
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC---CCCeEEe
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIA 559 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~---~~~~kl~ 559 (689)
+++|||.|++|.|...+++.+. .++++.+.-.|+.||..|+.|||+.+ |.||||||+|+|... +-..||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH~~n-----IAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLHSMN-----IAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred eEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHhcc-----hhhccCChhheeeecCCCCcceEec
Confidence 7899999999999999987653 56999999999999999999999988 999999999999974 5568999
Q ss_pred cccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 560 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 560 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|||+|+.-.... ......-|+.|.|||++...+|+...|+||+||++|-|+.|.+||++....+... .+..-+. ..
T Consensus 207 DfGFAK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp-gMk~rI~-~g 282 (400)
T KOG0604|consen 207 DFGFAKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMKRRIR-TG 282 (400)
T ss_pred ccccccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh-hHHhHhh-cc
Confidence 999999765322 2223345788999999999999999999999999999999999998753322111 1111111 01
Q ss_pred CCCCC----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 640 KGKFS----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 640 ~~~~~----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.-.+| ...++...++++..+..+|++|.|+.|++.+-|..
T Consensus 283 qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 283 QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence 11233 34577889999999999999999999999887654
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.4e-32 Score=292.94 Aligned_cols=264 Identities=22% Similarity=0.386 Sum_probs=214.5
Q ss_pred CHHHHHHHhccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEc
Q 005586 400 NLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCS 477 (689)
Q Consensus 400 ~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~ 477 (689)
.++.+...++-|.+.+.||+|.+|.||+++. ++|+.+|+|++.... ....+...|.+++... .|||++.++|++.-
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3444455667788889999999999999985 479999999987664 3345677788888877 69999999999864
Q ss_pred C---CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC
Q 005586 478 R---GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 554 (689)
Q Consensus 478 ~---~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~ 554 (689)
. .++++++|||||.+||..++++.-. ...+.|.....|++++++|+.+||... ++|||||-.|||+++++
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nk-----viHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNK-----VIHRDIKGQNVLLTENA 160 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcc-----eeeecccCceEEEeccC
Confidence 3 3578999999999999999998765 456999999999999999999999877 99999999999999999
Q ss_pred CeEEecccccccccCCceeeeecCCCCCCCCCcccccc-----CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh
Q 005586 555 NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 629 (689)
Q Consensus 555 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~ 629 (689)
.+|+.|||++..+..... ......||+.|||||++.- ..|+.++|+||+|++..||.-|.+|+.+..+...
T Consensus 161 ~VKLvDFGvSaQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--- 236 (953)
T KOG0587|consen 161 EVKLVDFGVSAQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--- 236 (953)
T ss_pred cEEEeeeeeeeeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---
Confidence 999999999988765432 2334568999999999863 3477899999999999999999999976533221
Q ss_pred hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 630 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
-+.-.-.|..+..-++...+++.+++..|+.+|-++||++.+++++-
T Consensus 237 LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 237 LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 11111223334445778899999999999999999999999998763
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.6e-31 Score=267.19 Aligned_cols=239 Identities=25% Similarity=0.382 Sum_probs=191.9
Q ss_pred CcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHh
Q 005586 421 NFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL 499 (689)
Q Consensus 421 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L 499 (689)
+||.||+|... +|+.+|+|++...........|.+|++.+++++|+|++++++++.. ....++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED--EDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee--CCEEEEEEeCCCCCCHHHHH
Confidence 58999999987 4899999999876533336789999999999999999999999854 46889999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceeeeecCC
Q 005586 500 DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 579 (689)
Q Consensus 500 ~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 579 (689)
..... +++..++.++.+++++++|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 79 ~~~~~----~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~ 147 (244)
T smart00220 79 KKRGR----LSEDEARFYARQILSALEYLHSNG-----IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFV 147 (244)
T ss_pred HhccC----CCHHHHHHHHHHHHHHHHHHHHcC-----eecCCcCHHHeEECCCCcEEEccccceeeecccc--cccccc
Confidence 76432 789999999999999999999987 9999999999999999999999999998765432 222344
Q ss_pred CCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH-HHHHHHHHHHHHh
Q 005586 580 AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE-SEAAKLGKMALVC 658 (689)
Q Consensus 580 ~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~C 658 (689)
++..|++||......++.++||||||++++||++|+.|+........ ................ ....++.+++.+|
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE---LFKKIGKPKPPFPPPEWKISPEAKDLIRKL 224 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHhccCCCCccccccCCHHHHHHHHHH
Confidence 66789999999888899999999999999999999999865211111 1111111111100000 1456899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005586 659 THEDPENRPTMEAVIEE 675 (689)
Q Consensus 659 l~~dp~~RPs~~evl~~ 675 (689)
+..+|++||++.+++++
T Consensus 225 l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 225 LVKDPEKRLTAEEALQH 241 (244)
T ss_pred ccCCchhccCHHHHhhC
Confidence 99999999999999974
No 381
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=7.3e-32 Score=301.79 Aligned_cols=263 Identities=17% Similarity=0.192 Sum_probs=173.2
Q ss_pred HhccCCcccccccCCcceEEEEEec-C----CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEE----Ec
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR-D----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC----CS 477 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~----~~ 477 (689)
..++|...+.||+|+||.||+|.+. + +..||+|++.... ....+..| .+....+.+++.+...+ ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~---~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG---AVEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc---hhHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4568889999999999999999986 4 6899999876432 11111111 12222233333222111 11
Q ss_pred CCCCeEEEEEEcCCCCCHHHHhhhcCCC----------------CCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeec
Q 005586 478 RGRGECFLIYDFAPKGKLSKYLDQEEGS----------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHR 541 (689)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~L~~~~~~----------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~ 541 (689)
....+.++||||+++++|.++++..... .....+.....|+.|++.||+|||+.+ |+||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-----IiHR 279 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-----IVHR 279 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-----EEeC
Confidence 3456799999999999999998754210 001123345679999999999999987 9999
Q ss_pred CCCCCceeecC-CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccC----------------------CCCCc
Q 005586 542 NLSVEKVLIDQ-QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG----------------------RFTER 598 (689)
Q Consensus 542 dlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~k 598 (689)
||||+|||+++ ++.+||+|||+++.+............++++|||||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999996 58999999999987654332222334567899999965321 24456
Q ss_pred ccchhHHHHHHHHHhCCCCcchhHHHHHh---h-----hhhhHhhccccCCC----C--CHHHHHHHHHHHHHhccCCCC
Q 005586 599 SDIFAFGVIILQILTGSLVLTSSMRLAAE---S-----ATFENFIDRNLKGK----F--SESEAAKLGKMALVCTHEDPE 664 (689)
Q Consensus 599 sDV~sfGvvl~elltG~~p~~~~~~~~~~---~-----~~~~~~~~~~~~~~----~--~~~~~~~l~~l~~~Cl~~dp~ 664 (689)
+|||||||+||||+++..+.......... . ..+.....+..... + .........+++..|++.||+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 79999999999999988776543211100 0 01111111110000 0 001122345899999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 005586 665 NRPTMEAVIEELTVA 679 (689)
Q Consensus 665 ~RPs~~evl~~L~~~ 679 (689)
+|||+.|++++-+..
T Consensus 440 kR~ta~e~L~Hpff~ 454 (566)
T PLN03225 440 QRISAKAALAHPYFD 454 (566)
T ss_pred cCCCHHHHhCCcCcC
Confidence 999999999986654
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=236.74 Aligned_cols=255 Identities=20% Similarity=0.361 Sum_probs=190.3
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCch-HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.|...++||+|.||+||+|+.+ .+..||+|+++...... -.....+||-+++.++|+|||++++...+ ....-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs--dkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc--CceeEEeH
Confidence 3555688999999999999865 68899999998765433 34678899999999999999999998743 46788999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+. .+|..+...-.+ .++......++.|+++||.|+|+.+ +.|||+||.|.|++.+|+.|++|||+++-+
T Consensus 81 e~cd-qdlkkyfdslng---~~d~~~~rsfmlqllrgl~fchshn-----vlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSHN-----VLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred HHhh-HHHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhhh-----hhhccCCcceEEeccCCcEEecccchhhhc
Confidence 9995 489988876554 3889999999999999999999988 899999999999999999999999999987
Q ss_pred cCCceeeeecCCCCCCCCCccccccCC-CCCcccchhHHHHHHHHHhCCCC-cchhHHHHHhhhhhh-------------
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLV-LTSSMRLAAESATFE------------- 632 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~ksDV~sfGvvl~elltG~~p-~~~~~~~~~~~~~~~------------- 632 (689)
+-... .......|.+|.+|.++.+.+ |+...|+||-||++.|+.....| |.+..-.....+++.
T Consensus 152 gipvr-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 152 GIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred CCceE-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 65432 223345688999999988765 78999999999999999875444 432211111111111
Q ss_pred -HhhccccCCCCCH---------HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 633 -NFIDRNLKGKFSE---------SEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 633 -~~~~~~~~~~~~~---------~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
...|....+.++. .....=+++...-+.-+|.+|.++++.+++.
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 1111111112221 1111224555555666999999999988864
No 383
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=258.57 Aligned_cols=258 Identities=20% Similarity=0.347 Sum_probs=198.0
Q ss_pred HHHHHHHhccCCcccccccCCcceEEEEE-ecCCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcC
Q 005586 401 LEEVESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSR 478 (689)
Q Consensus 401 ~~~l~~at~~f~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~ 478 (689)
++++-+-|+ +.||+|+|+.|--++ +.+|.++|||++.+.. ...+....+|++++...+ |+||++|+.|+ +
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-gHsR~RvfREVe~f~~Cqgh~nilqLiefF--E 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-GHSRSRVFREVETFYQCQGHKNILQLIEFF--E 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCC-chHHHHHHHHHHHHHHhcCCccHHHHHHHh--c
Confidence 455555553 789999999999886 5689999999998764 445667889999999995 99999999999 5
Q ss_pred CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC---
Q 005586 479 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN--- 555 (689)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~--- 555 (689)
+....|+|||-|.+|.|..++++.. .+++.+...+..+||.||.|||..+ |.|||+||+|||-.+...
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aLdFlH~kg-----IAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASALDFLHTKG-----IAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhhcC-----cccccCCccceeecCCCCcCc
Confidence 5678999999999999999998764 3889999999999999999999998 999999999999976554
Q ss_pred eEEecccccccccCCcee------eeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcchhH--
Q 005586 556 PLIADCGLHKLLADDIVF------SVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSM-- 622 (689)
Q Consensus 556 ~kl~DfGla~~~~~~~~~------~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG~~p~~~~~-- 622 (689)
+||+||.|..-....... ......|+..|||||++. ...|+.+.|.||+|||||-|+.|.+||.+.-
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~ 297 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA 297 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence 699999887544322111 122234566799999863 2458899999999999999999999995421
Q ss_pred -----HHH----HhhhhhhHhhccccCCCCCHH----HHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 623 -----RLA----AESATFENFIDRNLKGKFSES----EAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 623 -----~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
+.. -...-++.+.+. .-.+|+. .+.+..+++..-+..|+.+|-++.+++.+.+
T Consensus 298 dCGWdrGe~Cr~CQ~~LFesIQEG--kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 298 DCGWDRGEVCRVCQNKLFESIQEG--KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred cCCccCCCccHHHHHHHHHHHhcc--CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 110 011122222221 1233433 3667778888888899999999999998654
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=274.40 Aligned_cols=246 Identities=20% Similarity=0.320 Sum_probs=196.6
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
.++||+|-||+||-|.++ +|+.||||++.+.+. .+.+.+..+|+.+|++++||.||.+.-.| +..+..++|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~--ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF--ETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee--cCCceEEEEehhhc
Confidence 479999999999999986 799999999987764 44567899999999999999999998766 56788999999995
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC---CCCeEEeccccccccc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIADCGLHKLLA 568 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~---~~~~kl~DfGla~~~~ 568 (689)
+.=|+-.|....+ .|+...-..+..||+.||.|||..+ |+|+||||+||||.. --++||+|||+||..+
T Consensus 647 GDMLEMILSsEkg---RL~er~TkFlvtQIL~ALr~LH~kn-----IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 647 GDMLEMILSSEKG---RLPERITKFLVTQILVALRYLHFKN-----IVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred chHHHHHHHhhcc---cchHHHHHHHHHHHHHHHHHhhhcc-----eeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 5444545554443 3888888889999999999999988 999999999999964 3579999999999988
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc--CCCCCHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL--KGKFSES 646 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 646 (689)
+.... ....||+.|.|||++.++.|...-|+||.||++|--++|..||....... +++.+..+ ......+
T Consensus 719 EksFR--rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn------dQIQNAaFMyPp~PW~e 790 (888)
T KOG4236|consen 719 EKSFR--RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN------DQIQNAAFMYPPNPWSE 790 (888)
T ss_pred hhhhh--hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh------HHhhccccccCCCchhh
Confidence 76532 24679999999999999999999999999999999999999997543221 11111111 1122345
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 647 EAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 647 ~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
......+++..-++..-++|-+..+-+.+.|
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 5667778888888888889999888776654
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.9e-32 Score=257.03 Aligned_cols=263 Identities=20% Similarity=0.350 Sum_probs=193.9
Q ss_pred CCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcC------CCCe
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSR------GRGE 482 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~~~ 482 (689)
|....+||+|.||.||+|+.+ .|+.||+|+..-+..+ .-.....+|+++|..++|+|++.++..|... .+..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 334578999999999999976 5788898876533211 2224567899999999999999999988532 2345
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.++|+++++. +|..+|.... ..++..+..+++.++..||.|+|... |+|||+|+.|||++.++..||+|||
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~---vr~sls~Ikk~Mk~Lm~GL~~iHr~k-----ilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRK---VRFSLSEIKKVMKGLMNGLYYIHRNK-----ILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCcc---ccccHHHHHHHHHHHHHHHHHHHHhh-----HHhhcccHhhEEEcCCceEEeeccc
Confidence 8999999965 8999987653 34888999999999999999999987 9999999999999999999999999
Q ss_pred ccccccCCc-e--eeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh----------
Q 005586 563 LHKLLADDI-V--FSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES---------- 628 (689)
Q Consensus 563 la~~~~~~~-~--~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~---------- 628 (689)
++|.+.... . ........|..|++||.+.+ ..|+++.|||.-||+|.||.||.+-+..........
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 998664321 1 11223345788999999876 468999999999999999999988775433221100
Q ss_pred ---------hhhhHhh--ccccCCCCC--HHH------HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 629 ---------ATFENFI--DRNLKGKFS--ESE------AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 629 ---------~~~~~~~--~~~~~~~~~--~~~------~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
..+.+.+ .+-..+.+. ++. ..+..+++...+..||.+|++.++++.+-..-...
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 0111111 110111110 111 23677888899999999999999999887655433
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=265.29 Aligned_cols=240 Identities=21% Similarity=0.302 Sum_probs=190.9
Q ss_pred cCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 485 (689)
+|....+||+|+||.|-+|.-+ +...+|||++++.-. ....+--+.|-++|+-- +-|.++++...+ ...+.+|.
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF--QTmDRLyF 427 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF--QTMDRLYF 427 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh--hhhhheee
Confidence 6888899999999999999876 467899999986532 11222234556666655 678889888776 44678999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+.+|+|--++++.+. +.+.....+|.+||-||-|||+.+ ||.||||..|||||.+|++||+|||+++
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~kg-----IiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSKG-----IIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred EEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcCC-----eeeeeccccceEeccCCceEeeeccccc
Confidence 9999999999999987654 666778899999999999999998 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCH
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 645 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (689)
.---+.. .+....||+.|+|||++...+|+..+|+|||||+||||+.|++||+..... ..+..+.+.. -.||.
T Consensus 499 Eni~~~~-TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~----elF~aI~ehn--vsyPK 571 (683)
T KOG0696|consen 499 ENIFDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQAIMEHN--VSYPK 571 (683)
T ss_pred ccccCCc-ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHcc--CcCcc
Confidence 5322211 223345889999999999999999999999999999999999999765322 2233333333 24677
Q ss_pred HHHHHHHHHHHHhccCCCCCCC
Q 005586 646 SEAAKLGKMALVCTHEDPENRP 667 (689)
Q Consensus 646 ~~~~~l~~l~~~Cl~~dp~~RP 667 (689)
..+.+...+...-+...|.+|.
T Consensus 572 slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 572 SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred cccHHHHHHHHHHhhcCCcccc
Confidence 7778888888888889999884
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=263.06 Aligned_cols=259 Identities=18% Similarity=0.280 Sum_probs=199.1
Q ss_pred hccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCC------cceeEeeEEEcCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE------NIIRLRGFCCSRGR 480 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~------niv~l~g~~~~~~~ 480 (689)
+++|.....+|+|.||.|-.+..+ .+..||||+++... .-....+-|+++|+++.+. -+|.+.+|+ +..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF--dyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF--DYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh--hcc
Confidence 678899999999999999999875 47899999997543 3334567789999999432 478888888 456
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC--------
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-------- 552 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-------- 552 (689)
++.++|+|.| +-|+.++|..+. ..+++..+...|+.|+.++++|||+.+ ++|-||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~~k-----l~HTDLKPENILfvss~~~~~~~ 235 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHDLK-----LTHTDLKPENILFVSSEYFKTYN 235 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHhcc-----eeecCCChheEEEeccceEEEec
Confidence 8899999998 669999998754 345888899999999999999999988 999999999999931
Q ss_pred ------------CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcch
Q 005586 553 ------------QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTS 620 (689)
Q Consensus 553 ------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~ 620 (689)
+..+||.|||-|+.-.+.. .....|-.|+|||++.+-.++.++||||+||+|.|+.||...|+.
T Consensus 236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred cCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 3458999999998765543 233456779999999999999999999999999999999987753
Q ss_pred hH---HHHHhhhhh----hHhhccc----------cC-------C----------------CCCHHHHHHHHHHHHHhcc
Q 005586 621 SM---RLAAESATF----ENFIDRN----------LK-------G----------------KFSESEAAKLGKMALVCTH 660 (689)
Q Consensus 621 ~~---~~~~~~~~~----~~~~~~~----------~~-------~----------------~~~~~~~~~l~~l~~~Cl~ 660 (689)
-. ..+.-+..+ ..++.+. +. + .....+..++.+|+..++.
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 21 111100000 0001100 00 0 0123567789999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhCCc
Q 005586 661 EDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 661 ~dp~~RPs~~evl~~L~~~~p~ 682 (689)
.||.+|+|..|++++-......
T Consensus 392 fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 392 FDPARRITLREALSHPFFARLT 413 (415)
T ss_pred cCccccccHHHHhcCHHhhcCC
Confidence 9999999999999987766543
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=242.73 Aligned_cols=200 Identities=19% Similarity=0.349 Sum_probs=166.3
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
...||+|+||.|-+-++. +|+..|+|+++..-..+.+++...|+.+..+- ..|.+|.++|.+..+ ...++.||.|.
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--gdvwIcME~M~ 128 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--GDVWICMELMD 128 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--ccEEEeHHHhh
Confidence 467999999999888875 79999999998876667778888899876655 799999999987543 67999999994
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 571 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 571 (689)
-||..+-++.-.....+++.-.=+||..|.+||.|||+.-. +||||+||+|||++.+|++|++|||++..+.+..
T Consensus 129 -tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~----vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 129 -TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS----VIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred -hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh----hhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 58888766543344568888889999999999999998643 9999999999999999999999999998886643
Q ss_pred eeeeecCCCCCCCCCcccccc----CCCCCcccchhHHHHHHHHHhCCCCcchhH
Q 005586 572 VFSVLKTSAAMGYLAPEYVTT----GRFTERSDIFAFGVIILQILTGSLVLTSSM 622 (689)
Q Consensus 572 ~~~~~~~~~~~~y~aPE~~~~----~~~~~ksDV~sfGvvl~elltG~~p~~~~~ 622 (689)
.. .-..|...|||||.+.. ..|+-||||||+|+.+.||.+++.|+..+.
T Consensus 204 Ak--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 204 AK--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred HH--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 21 11345567999999753 368999999999999999999999998763
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-31 Score=282.61 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=186.0
Q ss_pred CCcccccccCCcc-eEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 411 FSEVNLLGKGNFS-SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 411 f~~~~~lg~G~~g-~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
|...+++|.|+-| .||+|... |+.||||++-.+. ..-..+|+..|..- +|||||+++ |.+.+++..||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyy--c~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYY--CSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEE--eeccCCceEEEEeh
Confidence 4445778998876 57999996 8899999987543 23346899999888 699999985 56678889999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC---C--CCeEEecccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---Q--FNPLIADCGL 563 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~---~--~~~kl~DfGl 563 (689)
.| ..+|.+++...........-...+.+..|+++||++||+.+ ||||||||.||||+. + ..++|+|||+
T Consensus 584 LC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-----iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 584 LC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-----IVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred Hh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-----cccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99 56999999874111111111344678899999999999987 999999999999986 3 4689999999
Q ss_pred cccccCCc--eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhC-CCCcchhHHHHHhhhhhhHhhccccC
Q 005586 564 HKLLADDI--VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG-SLVLTSSMRLAAESATFENFIDRNLK 640 (689)
Q Consensus 564 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
++.+..+. ........||-||+|||.+...+-+.++|+||+|||+|+.+|| +.||.+....... ++.... .+.
T Consensus 658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N--Il~~~~--~L~ 733 (903)
T KOG1027|consen 658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--ILTGNY--TLV 733 (903)
T ss_pred ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh--hhcCcc--cee
Confidence 99886543 2234456789999999999998888999999999999999997 8999765322111 110000 000
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
........+..+|+.+|++.||..||++.+|+.|
T Consensus 734 -~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 734 -HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -eeccCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0011111188899999999999999999999865
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.6e-30 Score=266.72 Aligned_cols=235 Identities=19% Similarity=0.337 Sum_probs=183.6
Q ss_pred ccCCcccccccCCcceEEEEEe-cCCcEEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
.-|..++.||-|+||+|.+++- ++...+|.|.+++.+. .........|-.+|+....+-||+|+--| .+.+.+|+
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF--QDkdnLYF 706 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF--QDKDNLYF 706 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe--ccCCceEE
Confidence 4577788999999999999974 4577899999987653 23345677899999999999999997655 55688999
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
||||+++|++-.+|...+ .+++.....++.+++.|+++.|..| +|||||||.|||||.||++||.||||+.
T Consensus 707 VMdYIPGGDmMSLLIrmg----IFeE~LARFYIAEltcAiesVHkmG-----FIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMG----IFEEDLARFYIAELTCAIESVHKMG-----FIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred EEeccCCccHHHHHHHhc----cCHHHHHHHHHHHHHHHHHHHHhcc-----ceecccCccceEEccCCceeeeeccccc
Confidence 999999999999997654 3788888889999999999999998 9999999999999999999999999975
Q ss_pred ccc---CCcee--------------------------------------eeecCCCCCCCCCccccccCCCCCcccchhH
Q 005586 566 LLA---DDIVF--------------------------------------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAF 604 (689)
Q Consensus 566 ~~~---~~~~~--------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sf 604 (689)
-+. +..++ ......||..|+|||++....|+.-+|+||.
T Consensus 778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV 857 (1034)
T ss_pred cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence 431 11000 0011357888999999999999999999999
Q ss_pred HHHHHHHHhCCCCcchhHHHHHh--hhhhhHhhccccCCCCCHHHHHHHHHH
Q 005586 605 GVIILQILTGSLVLTSSMRLAAE--SATFENFIDRNLKGKFSESEAAKLGKM 654 (689)
Q Consensus 605 Gvvl~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l 654 (689)
|||||||+.|+.||-........ ...++.+++-...+....++..-+.+|
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kL 909 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKL 909 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHH
Confidence 99999999999999654332221 224455555555555555555444444
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=265.39 Aligned_cols=250 Identities=18% Similarity=0.282 Sum_probs=203.4
Q ss_pred CcccccccCCcceEEEEEecCCc-EEEEEEecccCC--chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 412 SEVNLLGKGNFSSVYKGTLRDGT-LVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.....||-||||.|=++..+... .+|+|.+++... ...+.....|-.+|.+.+.|.||++|.-| .+...+|++||
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf--rd~kyvYmLmE 500 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF--RDSKYVYMLME 500 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--ccchhhhhhHH
Confidence 34457999999999999887433 488888876542 33455778899999999999999999877 55688999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
-|-+|.|...|++.+. ++..+...++..+.+|++|||+.+ ||.|||||+|.+||.+|-+||.|||+|+.+.
T Consensus 501 aClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k~-----iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRKG-----IIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhcC-----ceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 9999999999987653 888888999999999999999998 9999999999999999999999999999887
Q ss_pred CCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHH
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 648 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (689)
.+. .+....||+.|.|||++.+...+..+|.||+|+++|||+||++||...........++.. +| ...+|....
T Consensus 572 ~g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-id---~i~~Pr~I~ 645 (732)
T KOG0614|consen 572 SGR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-ID---KIEFPRRIT 645 (732)
T ss_pred cCC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-hh---hhhcccccc
Confidence 654 333456899999999999999999999999999999999999999765443333222221 11 123455666
Q ss_pred HHHHHHHHHhccCCCCCCCC-----HHHHHHHHHh
Q 005586 649 AKLGKMALVCTHEDPENRPT-----MEAVIEELTV 678 (689)
Q Consensus 649 ~~l~~l~~~Cl~~dp~~RPs-----~~evl~~L~~ 678 (689)
....+++++-+...|.+|.- +.|+-+|-|.
T Consensus 646 k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 646 KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 77888888888899999976 6777777654
No 392
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=6.3e-28 Score=236.55 Aligned_cols=212 Identities=32% Similarity=0.566 Sum_probs=182.0
Q ss_pred cccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCCH
Q 005586 417 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL 495 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL 495 (689)
||+|.+|.||++...+ |+.+++|++...........+.+|++.+.+++|++++++++++.. ....++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED--ENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec--CCeEEEEEecCCCCcH
Confidence 6899999999999864 899999999876533245689999999999999999999999854 3688999999999999
Q ss_pred HHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecccccccccCCceee
Q 005586 496 SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKLLADDIVFS 574 (689)
Q Consensus 496 ~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~ 574 (689)
.+++.... ..+++..+..++.+++++++|||+.+ ++|+||+|.||++++ ++.++|+|||.+........ .
T Consensus 79 ~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~-----~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~ 149 (215)
T cd00180 79 KDLLKENE---GKLSEDEILRILLQILEGLEYLHSNG-----IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-L 149 (215)
T ss_pred HHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-h
Confidence 99997652 24889999999999999999999987 999999999999999 89999999999986654321 1
Q ss_pred eecCCCCCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHH
Q 005586 575 VLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 653 (689)
Q Consensus 575 ~~~~~~~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 653 (689)
.....+...|++||..... .++.++|+|++|++++|| ..+.+
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~ 192 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKD 192 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHH
Confidence 1223456679999998877 788999999999999998 56889
Q ss_pred HHHHhccCCCCCCCCHHHHHHHH
Q 005586 654 MALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 654 l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
++..|++.+|++||++.++++.+
T Consensus 193 ~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 193 LIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHhhCCcccCcCHHHHhhCC
Confidence 99999999999999999998753
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2.7e-28 Score=294.63 Aligned_cols=211 Identities=40% Similarity=0.657 Sum_probs=150.0
Q ss_pred ChHHHHHHHHHHHccCCCCCccCCCCCCCCCCCCCcceEEcCCCCCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCc
Q 005586 24 GNTELRALLDLKASLDPENKLLQSWTENGDPCSGSFEGIACNEHRKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNS 103 (689)
Q Consensus 24 ~~~~~~all~~k~~~~~~~~~~~~W~~~~~~C~~~w~gv~C~~~~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~ 103 (689)
.+.|+.||++||++++++...+.+|+.+.++| .|.||+|+..++|+.|+|++|+++|.+++.|..+++|++|+|++|+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 56899999999999965555678998777888 7999999877899999999999999999999999999999999999
Q ss_pred ccccCCcccc-CCCCCcEEEecccCCCCCCC----------------------ccccCCccccEEeeecccCCCCCchhc
Q 005586 104 LSGEIPKEIR-NLTELTDLYLDVNNLSGNIP----------------------PEIGSMASLQVLQLCCNQLTGNIPAQI 160 (689)
Q Consensus 104 l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p----------------------~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 160 (689)
++|.+|..+. ++++|++|+|++|+++|.+| ..++++++|++|+|++|.+++.+|..+
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 9998887754 77777777777777665554 444555555555555555555555555
Q ss_pred CCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchhHHhcc
Q 005586 161 GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLN 236 (689)
Q Consensus 161 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~~~~~~ 236 (689)
+++++|++|+|++|++++.+|..++++++|+.|+|++|++++.+|..+..+++|++|++++|++++.+|..+..+.
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 5555555555555555555555555555555555555555555555555555555555555555555555555443
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=239.84 Aligned_cols=245 Identities=16% Similarity=0.280 Sum_probs=189.2
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 484 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 484 (689)
++|...++||+|+|.+|-.++++ +.+.+|+|+++++-.. ....-...|-.+..+. +||.+|-+..++. .....+
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq--tesrlf 327 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ--TESRLF 327 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc--ccceEE
Confidence 46778899999999999999976 6788999999865432 2222334555566655 7999999988773 346789
Q ss_pred EEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 485 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 485 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
+|.||+++|+|--+++..+ .+++.....+..+|..||.|||+.+ ||.||||..|||+|..|++|+.|||+.
T Consensus 328 fvieyv~ggdlmfhmqrqr----klpeeharfys~ei~lal~flh~rg-----iiyrdlkldnvlldaeghikltdygmc 398 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLALNFLHERG-----IIYRDLKLDNVLLDAEGHIKLTDYGMC 398 (593)
T ss_pred EEEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHHHHHHhhcC-----eeeeeccccceEEccCCceeecccchh
Confidence 9999999999987776543 3888888899999999999999998 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHH----HHHhhhhhhHhhccccC
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR----LAAESATFENFIDRNLK 640 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~ 640 (689)
+.--.+.. .+....||+.|+|||++.+..|...+|+|++||+|+||+.|+.||+-... ...+.--+.-++.+.+
T Consensus 399 ke~l~~gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi- 476 (593)
T KOG0695|consen 399 KEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI- 476 (593)
T ss_pred hcCCCCCc-ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-
Confidence 85322211 12234588999999999999999999999999999999999999963211 1111111222233322
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRP 667 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RP 667 (689)
.+|...+.+...+...-+.+||.+|.
T Consensus 477 -riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 477 -RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -cccceeehhhHHHHHHhhcCCcHHhc
Confidence 24555667788888899999999985
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=1.7e-28 Score=227.54 Aligned_cols=252 Identities=17% Similarity=0.294 Sum_probs=193.4
Q ss_pred ccCCcccccccCCcceEEEEE-ecCCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 486 (689)
++|+..+++|+|.|+.||.|. ..+...++||.++.. ..+.+.+|+++|..++ ||||+.|++...+.......+|
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 567778999999999999997 457889999999854 3457889999999997 9999999999877777788999
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC-CCCeEEecccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHK 565 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~-~~~~kl~DfGla~ 565 (689)
+||+.|.+...+-. .|+-......+.++++||.|+|++| |.|||+||.||++|. ....+|.|+|+|.
T Consensus 114 FE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~G-----ImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSMG-----IMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhcC-----cccccCCcceeeechhhceeeeeecchHh
Confidence 99999988776653 2677788889999999999999999 999999999999996 5678999999999
Q ss_pred cccCCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhH---HHHHh--------------
Q 005586 566 LLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSM---RLAAE-------------- 627 (689)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~---~~~~~-------------- 627 (689)
+......+... ..+..|.-||.+.. ..|+..-|+|||||++.+|+..+.||-... .+.+.
T Consensus 182 FYHp~~eYnVR--VASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 182 FYHPGKEYNVR--VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hcCCCceeeee--eehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 98776544332 23445788998765 457889999999999999999999984221 11100
Q ss_pred -------hhhhhHhhccccCC---CC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 628 -------SATFENFIDRNLKG---KF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 628 -------~~~~~~~~~~~~~~---~~-----~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...+.+++.+..+. .+ ..-...++.++...-+..|-.+|||++|.+.+...
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF 325 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYF 325 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchH
Confidence 00111111111100 00 01124678888888999999999999999877543
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.4e-30 Score=242.07 Aligned_cols=255 Identities=19% Similarity=0.322 Sum_probs=190.0
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC---CeEEEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---GECFLIYD 488 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV~e 488 (689)
.+.||-|+||.||....+ +|+.||.|++..... -...+.+.+|+++|..++|.|++..+++...... .+.|+|+|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 478999999999999875 899999999864321 2334678899999999999999999876532211 35678889
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
.|. .+|.+.+-. .+.++-....-+..||++||.|||+.+ |.||||||-|.|++.+...||+|||++|.-.
T Consensus 138 LmQ-SDLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~-----ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 138 LMQ-SDLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTAN-----ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHH-hhhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcc-----hhhccCCCccEEeccCceEEecccccccccc
Confidence 884 477777653 346888888899999999999999988 9999999999999999999999999999776
Q ss_pred CCceeeeecCCCCCCCCCcccccc-CCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHh-------------------h
Q 005586 569 DDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE-------------------S 628 (689)
Q Consensus 569 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~-------------------~ 628 (689)
.+..........|-.|+|||.+.+ +.|+.+.||||.||++.|++..+..|......... +
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 555444444456678999999887 46899999999999999999888776432111000 0
Q ss_pred hhhhHhhccccCCC---------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 629 ATFENFIDRNLKGK---------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 629 ~~~~~~~~~~~~~~---------~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
+.-..++....+.. -+.....+...+.+.++..||.+|.+..+.+.++..
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 00011111111111 112334566777888899999999999998876543
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-28 Score=236.63 Aligned_cols=254 Identities=20% Similarity=0.305 Sum_probs=192.6
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCC-chHHHHHHHHHHHHhccCCCcceeEeeEEEcCC----CCe
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RGE 482 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~ 482 (689)
.+|.....+|.|.- .|..+... .++.||+|++..... ....+...+|...+..++|+||++++.++.... -.+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35666778888887 66666543 588999998865421 234456778999999999999999999884321 135
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 562 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfG 562 (689)
.|+||||| .++|...++.. ++-.+...|..|+..|+.|||+.+ |+||||||+||++..+...||.|||
T Consensus 96 ~y~v~e~m-~~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs~~-----IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILME------LDHETISYILYQMLCGIKHLHSAG-----IIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHHhh-hhHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHhcc-----eeecccCcccceecchhheeeccch
Confidence 79999999 56999998832 677888999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhh-----------
Q 005586 563 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF----------- 631 (689)
Q Consensus 563 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~----------- 631 (689)
+|+.-..+ ........+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+..+...+....
T Consensus 164 ~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 164 LARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred hhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 99865544 22233445667999999999889999999999999999999998775433222221111
Q ss_pred ----------------------hHhhccc-cCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 005586 632 ----------------------ENFIDRN-LKG--KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 677 (689)
Q Consensus 632 ----------------------~~~~~~~-~~~--~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~ 677 (689)
.+.+... +.. +.+......+.+++.+|+..+|++|-+.+++++|.-
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 0111111 000 011234567889999999999999999999998853
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=7.1e-27 Score=232.42 Aligned_cols=200 Identities=28% Similarity=0.482 Sum_probs=169.0
Q ss_pred CCcccccccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 411 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
|...+.||+|++|.||++...+ +..+++|.+.........+.+.+|++.+.+++|+|++++++++.. ....++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED--PEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec--CCceEEEEec
Confidence 4456789999999999999875 899999999866533256789999999999999999999999854 4678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+++++|.+++..... .+++..+..++.+++.++.|||+.+ ++|+|++++||+++.++.++|+|||.+.....
T Consensus 79 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 79 CEGGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLHSLG-----IVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred cCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 999999999976432 1789999999999999999999887 99999999999999999999999999987754
Q ss_pred CceeeeecCCCCCCCCCcccc-ccCCCCCcccchhHHHHHHHHHhCCCCcch
Q 005586 570 DIVFSVLKTSAAMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVLTS 620 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~-~~~~~~~ksDV~sfGvvl~elltG~~p~~~ 620 (689)
..........++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 151 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 151 DLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 320011123355679999998 667788899999999999999999999965
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-27 Score=246.39 Aligned_cols=197 Identities=21% Similarity=0.299 Sum_probs=166.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCc--hH-----HHHHHHHHHHHhccC---CCcceeEeeEEEc
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SE-----EAEFVKGLYLLTSLR---HENIIRLRGFCCS 477 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~-----~~~f~~e~~~l~~l~---H~niv~l~g~~~~ 477 (689)
.+|+..+.+|+|+||.|+.|.++ +...|+||.+.+++.- .. .-..-.||++|+.++ |+||++++.|+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF-- 638 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF-- 638 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee--
Confidence 45888899999999999999987 5678999999876531 11 113446899999997 99999999999
Q ss_pred CCCCeEEEEEEcC-CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCe
Q 005586 478 RGRGECFLIYDFA-PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 556 (689)
Q Consensus 478 ~~~~~~~lV~e~~-~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~ 556 (689)
++.+.+|++||-- ++-+|.+++..+. .+++.+..-|..||+.|+++||+.+ |||||||-+||.++.+|-+
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp----~m~E~eAk~IFkQV~agi~hlh~~~-----ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKP----RMDEPEAKLIFKQVVAGIKHLHDQG-----IVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccC----ccchHHHHHHHHHHHhccccccccC-----ceecccccccEEEecCCeE
Confidence 6678899999865 5569999997654 3899999999999999999999998 9999999999999999999
Q ss_pred EEecccccccccCCceeeeecCCCCCCCCCccccccCCC-CCcccchhHHHHHHHHHhCCCCcc
Q 005586 557 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLT 619 (689)
Q Consensus 557 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~ksDV~sfGvvl~elltG~~p~~ 619 (689)
||.|||-+.....+. .....||++|.|||++.+.+| ...-|||++|++||-++....||+
T Consensus 710 klidfgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEeeccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999988766543 233468999999999999888 566899999999999999888875
No 400
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.8e-26 Score=232.00 Aligned_cols=133 Identities=20% Similarity=0.299 Sum_probs=110.9
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC-----C---CcceeEeeEEEcC-
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-----H---ENIIRLRGFCCSR- 478 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-----H---~niv~l~g~~~~~- 478 (689)
.+|...++||=|.|++||+|... +.+.||+|+.+... .-.+..+.||++|++++ | ..||+|+++|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 57888899999999999999875 67899999987543 23346778999999984 2 3699999988543
Q ss_pred -CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee
Q 005586 479 -GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 550 (689)
Q Consensus 479 -~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl 550 (689)
.+.++++|+||+ +.+|..++....- ..++...+.+|+.||+.||.|||..+. |||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ecg----IIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHRECG----IIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhcC----ccccCCCcceeee
Confidence 346899999999 7799999976543 348889999999999999999998764 9999999999999
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-26 Score=220.88 Aligned_cols=247 Identities=20% Similarity=0.346 Sum_probs=179.7
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 486 (689)
+.|.+.+.+|+|.||.+-+++++ ..+.+|+|.+... ....++|.+|..---.+ .|.||+.-|+...+. .+.++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p--~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d~YvF~ 100 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP--QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SDAYVFV 100 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc--hhhHHHHHHHhccceeeccchhhhHHHHHHhhc-CceEEEe
Confidence 45777889999999999999987 5788999988765 34567899998654455 599999988765543 4678899
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec--CCCCeEEeccccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQFNPLIADCGLH 564 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~--~~~~~kl~DfGla 564 (689)
+||.|.|||.+.+...+ +.+..-.+++.|++.|+.|+|+.+ +||||||.+|||+- +...+|++|||++
T Consensus 101 qE~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHskn-----lVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSKN-----LVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred eccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhccc-----hhhcccccceEEEecCCccEEEeeecccc
Confidence 99999999998886533 677788899999999999999988 99999999999994 4568999999998
Q ss_pred ccccCCceeeeecCCCCCCCCCcccccc---C--CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc--
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVTT---G--RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-- 637 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~--~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-- 637 (689)
+..+... .....+..|.+||.... + ...+.+|||.||++++..+||+.|+....-.......++....+
T Consensus 171 ~k~g~tV----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 171 RKVGTTV----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred cccCcee----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC
Confidence 7654321 11223345999997643 2 35678999999999999999999996321111111112222111
Q ss_pred -ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 005586 638 -NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVI 673 (689)
Q Consensus 638 -~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl 673 (689)
.+... ...-+..+.++..+-+..+|++|=...++-
T Consensus 247 ~~~P~~-F~~fs~~a~r~Fkk~lt~~~~drcki~~~k 282 (378)
T KOG1345|consen 247 PALPKK-FNPFSEKALRLFKKSLTPRFKDRCKIWTAK 282 (378)
T ss_pred ccCchh-hcccCHHHHHHHHHhcCCcccccchhHHHH
Confidence 11111 112345677888888899999884444443
No 402
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.8e-27 Score=221.96 Aligned_cols=247 Identities=21% Similarity=0.394 Sum_probs=193.5
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCch-HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCC
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 493 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~g 493 (689)
.+|.+...|..|+|++. |..+++|+++...... ..++|..|.-.|+.+.||||++++|.|. .+....++..|||.|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn--sppnlv~isq~mp~g 272 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN--SPPNLVIISQYMPFG 272 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc--CCCCceEeeeeccch
Confidence 36888999999999997 4556668887665432 3368999999999999999999999994 457889999999999
Q ss_pred CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCcee
Q 005586 494 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 573 (689)
Q Consensus 494 sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 573 (689)
+|...||+.. .-..+-.+..++|.++|+|++|||+.. |-|.---|.+..|++|++.++||+- +-+++ ..
T Consensus 273 slynvlhe~t--~vvvd~sqav~faldiargmaflhsle---p~ipr~~lns~hvmidedltarism-ad~kf-----sf 341 (448)
T KOG0195|consen 273 SLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLE---PMIPRFYLNSKHVMIDEDLTARISM-ADTKF-----SF 341 (448)
T ss_pred HHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcc---hhhhhhhcccceEEecchhhhheec-cccee-----ee
Confidence 9999999754 345777889999999999999999975 4344457999999999999999862 11111 11
Q ss_pred eeecCCCCCCCCCccccccCCC---CCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHH
Q 005586 574 SVLKTSAAMGYLAPEYVTTGRF---TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAK 650 (689)
Q Consensus 574 ~~~~~~~~~~y~aPE~~~~~~~---~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (689)
...+..-.+.||+||.+...+- -..+|+|||.+++||+.|...||.+....... .++.-..++..+|+..+..
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~h 417 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRH 417 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHH
Confidence 1112223456999999876653 35799999999999999999999765433222 2233346677788888999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 651 LGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 651 l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
+.+++.-|...||.+||.+..|+-.|+..
T Consensus 418 m~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 418 MNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 99999999999999999999999888764
No 403
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=8.2e-26 Score=216.41 Aligned_cols=167 Identities=16% Similarity=0.203 Sum_probs=127.5
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCce
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 572 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 572 (689)
|+|.++++... ..++|.+++.|+.|+++||+|||+.+ ||+|||+++++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH~~~-----------kp~Nil~~~~~~~~~--fG~~~~~~~~~- 63 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELHRQA-----------KSGNILLTWDGLLKL--DGSVAFKTPEQ- 63 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhcC-----------CcccEeEcCccceee--ccceEeecccc-
Confidence 78999998643 24999999999999999999999752 999999999999999 99998765432
Q ss_pred eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCC--CCCHHHHH-
Q 005586 573 FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--KFSESEAA- 649 (689)
Q Consensus 573 ~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 649 (689)
..++..|||||++.+..++.++|||||||++|||+||+.|+............+.....+.... ..+.....
T Consensus 64 -----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAA 138 (176)
T ss_pred -----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhh
Confidence 2577899999999999999999999999999999999999864322111111111111111000 11222233
Q ss_pred -HHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 650 -KLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 650 -~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
++.+++.+|++.+|++||++.|+++++....+
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 69999999999999999999999999987643
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.3e-26 Score=272.63 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=143.2
Q ss_pred ccCC-CcceeEeeEEEcC-----CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCC
Q 005586 462 SLRH-ENIIRLRGFCCSR-----GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 535 (689)
Q Consensus 462 ~l~H-~niv~l~g~~~~~-----~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 535 (689)
.++| +||++++++|... ..+..+.++||+ .++|.++|.... ..+++.+++.|+.||++||+|||+.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~g--- 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQG--- 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 4455 5888888876211 123467788988 569999997532 34899999999999999999999988
Q ss_pred CceeecCCCCCceeecC-------------------CCCeEEecccccccccCCce---------------eeeecCCCC
Q 005586 536 PAIVHRNLSVEKVLIDQ-------------------QFNPLIADCGLHKLLADDIV---------------FSVLKTSAA 581 (689)
Q Consensus 536 ~~ivH~dlk~~NiLl~~-------------------~~~~kl~DfGla~~~~~~~~---------------~~~~~~~~~ 581 (689)
|+||||||+||||+. ++.+|++|||+++....... .......+|
T Consensus 101 --IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 101 --IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred --eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 999999999999954 45567777777764321000 000112467
Q ss_pred CCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccC
Q 005586 582 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHE 661 (689)
Q Consensus 582 ~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~ 661 (689)
..|||||++.+..++.++|||||||+||||++|..|+........ ........+ .......+...++.+||+.
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~L~~ 251 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMS--SLRHRVLPP-----QILLNWPKEASFCLWLLHP 251 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHH--HHHHhhcCh-----hhhhcCHHHHHHHHHhCCC
Confidence 789999999999999999999999999999999888653211110 000111111 1111233456888899999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 005586 662 DPENRPTMEAVIEELTVA 679 (689)
Q Consensus 662 dp~~RPs~~evl~~L~~~ 679 (689)
+|.+||+|.|++++.+..
T Consensus 252 ~P~~Rps~~eil~h~~~~ 269 (793)
T PLN00181 252 EPSCRPSMSELLQSEFIN 269 (793)
T ss_pred ChhhCcChHHHhhchhhh
Confidence 999999999999886654
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-27 Score=247.35 Aligned_cols=252 Identities=19% Similarity=0.296 Sum_probs=197.3
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++|.....+|.|.||.|||++.+ .+...|+|.++... .....-..+|+-++...+|||||.++|-|.. ++..++.|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsylr--~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--RDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhhh--hcCcEEEE
Confidence 46677789999999999999975 79999999998765 3344556788999999999999999998854 46789999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||+.+|+|++.-+... ++++.+.-...++..+||+|||+.+ =+|||||-.|||+++.+.+|++|||.+...
T Consensus 92 EycgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~g-----k~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQG-----KIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred EecCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcCC-----cccccccccceeecccCceeecccCchhhh
Confidence 9999999999877543 4888888889999999999999988 599999999999999999999999998766
Q ss_pred cCCceeeeecCCCCCCCCCccccc---cCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc-cccCCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID-RNLKGKF 643 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 643 (689)
.... .+.....||+.|||||+.. .+.|.+++|||+.|+...|+---+.|..+...............+ +.++ -
T Consensus 163 tati-~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lk--D 239 (829)
T KOG0576|consen 163 TATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLK--D 239 (829)
T ss_pred hhhh-hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCccc--C
Confidence 5432 1233456899999999864 467899999999999999998888776443221111000011111 1121 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 644 SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 644 ~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.......+-++++.|+..+|++||+...++++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 23446678899999999999999999887754
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=2.6e-26 Score=235.44 Aligned_cols=263 Identities=17% Similarity=0.232 Sum_probs=198.0
Q ss_pred ccCHHHHHHHhccCCcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccC------CCccee
Q 005586 398 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR------HENIIR 470 (689)
Q Consensus 398 ~~~~~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~------H~niv~ 470 (689)
++.+.|+.. .+|......|+|-|+.|.+|... -|..||||++..+. ...+.=.+|+++|.+|+ --++++
T Consensus 423 rv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 423 RVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred EEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 344445443 57888889999999999999875 48899999998764 23345568899999985 347788
Q ss_pred EeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceee
Q 005586 471 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 550 (689)
Q Consensus 471 l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl 550 (689)
|+..|. ...++++|+|-+ .-+|.+.|...+. +-.|....+..++.|+..||..|-..+ |+|.||||.|||+
T Consensus 499 l~r~F~--hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c~-----vlHaDIKPDNiLV 569 (752)
T KOG0670|consen 499 LFRHFK--HKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKCG-----VLHADIKPDNILV 569 (752)
T ss_pred HHHHhh--hcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhcC-----eeecccCccceEe
Confidence 877663 358899999988 4599999987653 345888899999999999999999877 9999999999999
Q ss_pred cCC-CCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhh-
Q 005586 551 DQQ-FNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES- 628 (689)
Q Consensus 551 ~~~-~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~- 628 (689)
++. ...||||||-|....+....+.. .+-.|.|||++.+.+|+...|+||.||.||||.||+..|.+........
T Consensus 570 NE~k~iLKLCDfGSA~~~~eneitPYL---VSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl 646 (752)
T KOG0670|consen 570 NESKNILKLCDFGSASFASENEITPYL---VSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL 646 (752)
T ss_pred ccCcceeeeccCccccccccccccHHH---HHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHH
Confidence 975 45699999999877665443322 2234999999999999999999999999999999998886432110000
Q ss_pred ---------------hhh---------------------------hHhhcc------ccC--CCCCHH---HHHHHHHHH
Q 005586 629 ---------------ATF---------------------------ENFIDR------NLK--GKFSES---EAAKLGKMA 655 (689)
Q Consensus 629 ---------------~~~---------------------------~~~~~~------~~~--~~~~~~---~~~~l~~l~ 655 (689)
..+ ...+.| .+. ..++.+ ...++.+|.
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence 000 000011 111 112333 356788999
Q ss_pred HHhccCCCCCCCCHHHHHHHH
Q 005586 656 LVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 656 ~~Cl~~dp~~RPs~~evl~~L 676 (689)
..|+..||++|.+..|.+++.
T Consensus 727 dkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred HHHhccChhhcCCHHHHhcCC
Confidence 999999999999999999874
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=1.7e-24 Score=218.96 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=191.4
Q ss_pred HHHHhccCCcccccccCCcceEEEEEec----CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeEEEcC
Q 005586 404 VESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR 478 (689)
Q Consensus 404 l~~at~~f~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~ 478 (689)
+....+.|...++||+|.|++||++.+. .+..||+|.+.... .......|++.|..+ -|.||+++.+++ .
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts---~p~ri~~El~~L~~~gG~~ni~~~~~~~--r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS---SPSRILNELEMLYRLGGSDNIIKLNGCF--R 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc---CchHHHHHHHHHHHhccchhhhcchhhh--c
Confidence 3345567888999999999999999864 46789999997654 334688999999999 499999999877 6
Q ss_pred CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-CCeE
Q 005586 479 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPL 557 (689)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~k 557 (689)
..+...+|+||++.....++... ++......+.+.+.+||+++|+.| ||||||||+|+|.+.. +.-.
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~G-----IvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKNG-----IVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhccC-----ccccCCCccccccccccCCce
Confidence 67899999999999999988864 667888899999999999999998 9999999999999864 5568
Q ss_pred EecccccccccCC-----------------------------------cee--------eeecCCCCCCCCCcccccc-C
Q 005586 558 IADCGLHKLLADD-----------------------------------IVF--------SVLKTSAAMGYLAPEYVTT-G 593 (689)
Q Consensus 558 l~DfGla~~~~~~-----------------------------------~~~--------~~~~~~~~~~y~aPE~~~~-~ 593 (689)
|.|||+|...... ... ......||+||.|||++.. .
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 9999998722100 000 0112458999999999865 4
Q ss_pred CCCCcccchhHHHHHHHHHhCCCCcchhH------------------HH-HHhhhh--h---------hHh------hc-
Q 005586 594 RFTERSDIFAFGVIILQILTGSLVLTSSM------------------RL-AAESAT--F---------ENF------ID- 636 (689)
Q Consensus 594 ~~~~ksDV~sfGvvl~elltG~~p~~~~~------------------~~-~~~~~~--~---------~~~------~~- 636 (689)
..++++||||-||+++-+++++.||-... +. +...+. + .+. ++
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 56899999999999999999999983210 00 000000 0 000 00
Q ss_pred cccCC-C--------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 637 RNLKG-K--------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 637 ~~~~~-~--------~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
..+.. . ..+..+..++++..+|+..+|.+|.+++|.+++.
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 00000 0 0111244788999999999999999999999874
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.1e-23 Score=218.54 Aligned_cols=166 Identities=16% Similarity=0.145 Sum_probs=127.2
Q ss_pred HhccCCcccccccCCcceEEEEEec--CCcEEEEEEecccC----CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCC
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR--DGTLVAIRSINVTS----CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 480 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~----~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 480 (689)
..++|...+.||+|+||+||+|.++ +++.||||++.... .......|.+|+++|.+++|+|+++.+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 3456888899999999999999875 57888999875331 122356799999999999999999633222
Q ss_pred CeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCC-CCCceeecCCCCeEEe
Q 005586 481 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL-SVEKVLIDQQFNPLIA 559 (689)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dl-k~~NiLl~~~~~~kl~ 559 (689)
+..++||||+++++|... .. .. ...++.++++||+|||+.+ |+|||| ||+|||++.++.+||+
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~g-----IiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRAG-----ITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHCC-----CeeCCCCCcceEEEcCCCCEEEE
Confidence 357999999999999732 11 11 1457889999999999987 999999 9999999999999999
Q ss_pred cccccccccCCceee-------eecCCCCCCCCCccccccC
Q 005586 560 DCGLHKLLADDIVFS-------VLKTSAAMGYLAPEYVTTG 593 (689)
Q Consensus 560 DfGla~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~ 593 (689)
|||+++.+....... .....+++.|+|||++...
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999765432111 1233466779999998653
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=4.8e-21 Score=201.14 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=195.7
Q ss_pred CCcccccccCCcceEEEEEecCCcEEEEEEecccCCch--HHHHHHHHHHHHhccCCC-cceeEeeEEEcCCCCeEEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS--EEAEFVKGLYLLTSLRHE-NIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--~~~~f~~e~~~l~~l~H~-niv~l~g~~~~~~~~~~~lV~ 487 (689)
|...+.||.|+||.||++... ..+++|.+....... ....|.+|+.+++.+.|+ +++++.+++. .....++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ--DEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe--cCCEEEEEE
Confidence 455678999999999999987 789999998766444 367899999999999988 7999999883 334579999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCC-CeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl~DfGla~~ 566 (689)
||+.++++.+++...... ..+.......++.|++.++.|+|+.+ ++|||+||+||+++... .+++.|||.++.
T Consensus 78 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~-----~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG-----IIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred ecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 999999999777654311 24788899999999999999999987 99999999999999988 799999999986
Q ss_pred ccCCcee-----eeecCCCCCCCCCcccccc---CCCCCcccchhHHHHHHHHHhCCCCcchhHH---HHHhhhhhhHhh
Q 005586 567 LADDIVF-----SVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMR---LAAESATFENFI 635 (689)
Q Consensus 567 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~---~~~~~ksDV~sfGvvl~elltG~~p~~~~~~---~~~~~~~~~~~~ 635 (689)
+...... ......++..|+|||.+.+ ..+....|+||+|++++++++|..|+..... .......+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 231 (384)
T COG0515 152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP 231 (384)
T ss_pred cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC
Confidence 6543321 2344567889999999987 5788999999999999999999999754432 111111111111
Q ss_pred ccccCCCCC----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 005586 636 DRNLKGKFS----ESEAAKLGKMALVCTHEDPENRPTMEAVIEE 675 (689)
Q Consensus 636 ~~~~~~~~~----~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~ 675 (689)
.+....... ......+.++...|+..+|..|.++.+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 110111111 1123578899999999999999999987765
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=5.2e-21 Score=201.19 Aligned_cols=261 Identities=17% Similarity=0.184 Sum_probs=190.3
Q ss_pred cCCcccccccCCcceEEEEEecCC--cEEEEEEecccCCchHHHHHHHHHHHHhccCC----CcceeEeeEEEcCCCCeE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDG--TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH----ENIIRLRGFCCSRGRGEC 483 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g--~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H----~niv~l~g~~~~~~~~~~ 483 (689)
+|...+.||+|+||.||++...+. ..+|+|.-......... .+..|..++..+.+ +++..+++... ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCcee
Confidence 678889999999999999997643 57888887665433222 67788888888863 57777777653 234678
Q ss_pred EEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-----CCeEE
Q 005586 484 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-----FNPLI 558 (689)
Q Consensus 484 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-----~~~kl 558 (689)
++||+.+ +.+|.++..... ...++-.+.+.|+.|++.+|.++|+.| ++||||||.|+++... ..+.|
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G-----~iHRDiKp~N~~~g~~~~~~~~~~~l 168 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKG-----FIHRDIKPENFVVGQSSRSEVRTLYL 168 (322)
T ss_pred EEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcC-----cccCCcCHHHeeecCCCCcccceEEE
Confidence 9999988 889999876544 345899999999999999999999998 9999999999999865 46899
Q ss_pred ecccccc--cccCCce---ee----eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhh
Q 005586 559 ADCGLHK--LLADDIV---FS----VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 629 (689)
Q Consensus 559 ~DfGla~--~~~~~~~---~~----~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~ 629 (689)
.|||+++ ....... .. .....||..|.++....+...+.+.|+||++.++.|++.|..|+........ ..
T Consensus 169 lDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~ 247 (322)
T KOG1164|consen 169 LDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KS 247 (322)
T ss_pred EecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HH
Confidence 9999998 3322111 11 1234589999999999999999999999999999999999999854321111 11
Q ss_pred hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCC
Q 005586 630 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 681 (689)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p 681 (689)
.+.+................++.++...+-..+..++|....+...++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 248 KFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred HHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 1111111111110112234456666666666899999999999988766633
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2e-21 Score=217.01 Aligned_cols=254 Identities=18% Similarity=0.220 Sum_probs=182.2
Q ss_pred ccccccCCcceEEEEEec-CCcEEEEEEec----ccCCc-hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLR-DGTLVAIRSIN----VTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~----~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.+++|.|++|.|+..... .....+.|... ..... .-...+..|..+-..++|+|++..+..+.+. ....-+|
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~~~~~~m 400 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--DGILQSM 400 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--ccchhhh
Confidence 578999999988877643 34444444333 11111 1112366677788889999998887766433 3344459
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||++. +|..++.... .+.-.++..+..|+..|+.|+|+.| |.|||+|++|++++.++.+||+|||.+...
T Consensus 401 E~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h~~G-----iahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLHSMG-----LAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred hcccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHHhcC-----ceeccCccccEEEecCCceEEeecCcceee
Confidence 99999 9999997642 3777888899999999999999998 999999999999999999999999998765
Q ss_pred cCCce---eeeecCCCCCCCCCccccccCCCCC-cccchhHHHHHHHHHhCCCCcchhHHHHHh---hhhhhHhhccccC
Q 005586 568 ADDIV---FSVLKTSAAMGYLAPEYVTTGRFTE-RSDIFAFGVIILQILTGSLVLTSSMRLAAE---SATFENFIDRNLK 640 (689)
Q Consensus 568 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~-ksDV~sfGvvl~elltG~~p~~~~~~~~~~---~~~~~~~~~~~~~ 640 (689)
.-+.. ....+..|+-.|+|||++.+..|.+ ..||||.||++..|++|+.|+......... .....+.-...-.
T Consensus 471 ~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 471 RYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGP 550 (601)
T ss_pred ccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccCh
Confidence 43222 3344556777899999999999976 589999999999999999998532211100 0000000000000
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 005586 641 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 679 (689)
Q Consensus 641 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~ 679 (689)
.......+.+...++.++++.||++|-++++|+++-|..
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~ 589 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR 589 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence 011234466788999999999999999999999886654
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=2.9e-20 Score=179.34 Aligned_cols=140 Identities=18% Similarity=0.158 Sum_probs=107.9
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCch-H-------HHHH-----------------HHHHHHHhccCCCcce
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS-E-------EAEF-----------------VKGLYLLTSLRHENII 469 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~-------~~~f-----------------~~e~~~l~~l~H~niv 469 (689)
..||+|+||.||+|..++|+.||||+++...... . ...| ..|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5799999999999998899999999997643110 0 1122 3499999999887764
Q ss_pred eEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhh-hCCCCCCCceeecCCCCCce
Q 005586 470 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL-HSSEVNKPAIVHRNLSVEKV 548 (689)
Q Consensus 470 ~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~~~ivH~dlk~~Ni 548 (689)
....+.. ...++||||++++++....... ..+++.+...++.|++.+|+|+ |+.+ |+||||||+||
T Consensus 83 ~p~~~~~----~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~~g-----iiHrDlkP~NI 149 (190)
T cd05147 83 CPEPILL----KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQDCR-----LVHADLSEYNL 149 (190)
T ss_pred CCcEEEe----cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHE
Confidence 4333321 2238999999988776543222 2488899999999999999999 6777 99999999999
Q ss_pred eecCCCCeEEeccccccccc
Q 005586 549 LIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 549 Ll~~~~~~kl~DfGla~~~~ 568 (689)
|++ ++.++|+|||++....
T Consensus 150 li~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 150 LYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred EEE-CCcEEEEEccccccCC
Confidence 998 4789999999987543
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=3.4e-21 Score=213.99 Aligned_cols=248 Identities=21% Similarity=0.271 Sum_probs=179.1
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHH--HhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYL--LTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~--l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
++...+.+|.+.|=+|.+|+.++|. |+||++-+.......+.|.++++- ..-++|||.+++.-+- ......|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~--~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL--VTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH--HhhHHHHHHH
Confidence 3555688999999999999999887 889999776644444455554433 4455899999987653 3335567888
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc-
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL- 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~- 566 (689)
+|+. -+|.+.|.... -+...+.+-||.|++.||..+|..+ |.|||||++|||++....+.|+||.--|.
T Consensus 101 qyvk-hnLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH~~g-----VcHGDIKsENILiTSWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 101 QYVK-HNLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCHKLG-----VCHGDIKSENILITSWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHHh-hhhhhhhccch----HHHHHHHHHHHHHHHHHHHHHHHcC-----ccccccccceEEEeeechhhhhcccccCCc
Confidence 8884 48888886543 3777788899999999999999988 99999999999999999999999987653
Q ss_pred -ccCCc----eeeeecCCCCCCCCCccccccC-----------CCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 005586 567 -LADDI----VFSVLKTSAAMGYLAPEYVTTG-----------RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 629 (689)
Q Consensus 567 -~~~~~----~~~~~~~~~~~~y~aPE~~~~~-----------~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~ 629 (689)
++.+. .+-......-..|+|||.+... ..+++.||||.|||+.||++ |++||.-..-.+-...
T Consensus 171 YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~ 250 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSG 250 (1431)
T ss_pred cCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhcc
Confidence 23322 2222233344579999987541 15788999999999999988 6777754322111111
Q ss_pred ---hhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 630 ---TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 630 ---~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..+..+. .-+...+++++..|++.||++|-++++.++.-+.
T Consensus 251 ~~~~~e~~Le--------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 251 NADDPEQLLE--------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred CccCHHHHHH--------hCcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1111110 0012257899999999999999999999987443
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=6.9e-20 Score=171.92 Aligned_cols=255 Identities=16% Similarity=0.236 Sum_probs=189.5
Q ss_pred ccCCcccccccCCcceEEEEE-ecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCC-CcceeEeeEEEcCCCCeEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH-ENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H-~niv~l~g~~~~~~~~~~~lV 486 (689)
+.|...+.||+|+||.+|.|. ..+|..||||.=.... ...+...|.++...++| ..|..++.|. .+...-.+|
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a---~hpqL~yEskvY~iL~~g~GiP~i~~y~--~e~~ynvlV 89 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA---KHPQLLYESKVYRILQGGVGIPHIRHYG--TEKDYNVLV 89 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC---CCcchhHHHHHHHHhccCCCCchhhhhc--cccccceee
Confidence 468888999999999999997 4689999999755432 23457778888888875 5666666665 335677899
Q ss_pred EEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC---CCeEEecccc
Q 005586 487 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FNPLIADCGL 563 (689)
Q Consensus 487 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~---~~~kl~DfGl 563 (689)
||.+ +.||++++.-... .++..+.+-.|-|++.-++|+|..+ +|||||||+|+|..-+ ..+.++|||+
T Consensus 90 MdLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r~-----fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLRN-----FIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred eecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhhc-----cccccCCccceeeccccccceEEEEeccc
Confidence 9998 8899999876543 4889999999999999999999988 9999999999999743 4577999999
Q ss_pred cccccCCce------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcc
Q 005586 564 HKLLADDIV------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 637 (689)
Q Consensus 564 a~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 637 (689)
|+.+.+... .......||.+|.+--...+...+.+-|+=|.|.||...-.|..|+.+... .......+.+...
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka-~tk~QKyEkI~Ek 239 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA-ATKKQKYEKISEK 239 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch-hhHHHHHHHHHHh
Confidence 997754321 112234578888877666666778899999999999999999999975422 2222223333222
Q ss_pred ccCC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 638 NLKG---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 638 ~~~~---~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
...- ......+.++.-.+..|-..--++-|....+-+..+.
T Consensus 240 K~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 240 KMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred hcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 2211 1122336678888888988888889988777665543
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.3e-20 Score=181.96 Aligned_cols=174 Identities=11% Similarity=0.101 Sum_probs=134.9
Q ss_pred HhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHH--HH------HHHHHHHHhccCCCcceeEeeEEEcC
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE--AE------FVKGLYLLTSLRHENIIRLRGFCCSR 478 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~--~~------f~~e~~~l~~l~H~niv~l~g~~~~~ 478 (689)
..++|...+++|.|+||.||.... ++..+|+|.+.......+. .. |.+|++.+.+++|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999765 5778999999765432221 22 68999999999999999999886533
Q ss_pred C------CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC
Q 005586 479 G------RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 552 (689)
Q Consensus 479 ~------~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~ 552 (689)
. ....++||||+++.+|.++.. ++. ....+++.+|..+|..+ ++|||+||+||++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g-----i~H~Dikp~Nili~~ 170 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG-----MVSGDPHKGNFIVSK 170 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC-----CccCCCChHHEEEeC
Confidence 2 235789999999999988732 222 24568999999999988 999999999999999
Q ss_pred CCCeEEecccccccccCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHH
Q 005586 553 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 612 (689)
Q Consensus 553 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ell 612 (689)
++ ++++|||..+....+... ..++....+..++|+|||||.+.-+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 88 999999988755332110 11344556778999999999886543
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=4.3e-20 Score=196.80 Aligned_cols=214 Identities=25% Similarity=0.396 Sum_probs=160.3
Q ss_pred HhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCcee
Q 005586 460 LTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 539 (689)
Q Consensus 460 l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~iv 539 (689)
|..+.|.|+.+++|.+... ...++|.+|+..|+|.+.+.... ..++|.-...+.+++++||+|||.. |-..
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~s----~i~~ 71 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHNS----PIGY 71 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhcC----ccee
Confidence 4578999999999999765 78899999999999999998743 3599999999999999999999964 3349
Q ss_pred ecCCCCCceeecCCCCeEEecccccccccCCce-eeeecCCCCCCCCCccccccC---C----CCCcccchhHHHHHHHH
Q 005586 540 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTG---R----FTERSDIFAFGVIILQI 611 (689)
Q Consensus 540 H~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~----~~~ksDV~sfGvvl~el 611 (689)
|+.++++|+++|..+.+|++|||+......... ..........-|.|||.+... . .+.+.||||||++++|+
T Consensus 72 hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 72 HGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred eeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 999999999999999999999999887643100 011111122459999998653 1 47789999999999999
Q ss_pred HhCCCCcchhHHHHHhhhhhhHhhc---cccCCCCC-H-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhCCc
Q 005586 612 LTGSLVLTSSMRLAAESATFENFID---RNLKGKFS-E-SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 682 (689)
Q Consensus 612 ltG~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~~~p~ 682 (689)
++.+.||............+..+.+ ..+++... . +...++..++..||..+|++||++++|-..++..-..
T Consensus 152 ~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred HhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9999999753222111111111111 11232222 1 3344799999999999999999999999888776553
No 417
>PLN03150 hypothetical protein; Provisional
Probab=99.81 E-value=1.7e-19 Score=204.63 Aligned_cols=142 Identities=39% Similarity=0.673 Sum_probs=99.7
Q ss_pred cCChHHHHHHHHHHHccCCCCCccCCCCCCCCCCCC---CcceEEcCCCCCEEEEEcCCCCcccccCcCcCCCCCCCEEE
Q 005586 22 VCGNTELRALLDLKASLDPENKLLQSWTENGDPCSG---SFEGIACNEHRKVANISLQGKGLTGKLSPSLSGLKCLSGLY 98 (689)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~~~~W~~~~~~C~~---~w~gv~C~~~~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~ 98 (689)
.+.++|..||+++|.++..+.. .+|+ +++|.. .|.||.|+.... . ....++.|+
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~--g~~C~p~~~~w~Gv~C~~~~~-----------~--------~~~~v~~L~ 424 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWN--GDPCVPQQHPWSGADCQFDST-----------K--------GKWFIDGLG 424 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCC--CCCCCCcccccccceeeccCC-----------C--------CceEEEEEE
Confidence 4567899999999999864322 3795 567742 599999952110 0 001245566
Q ss_pred ccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCC
Q 005586 99 LHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNG 178 (689)
Q Consensus 99 L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 178 (689)
|++|.|+|.+|..++.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|
T Consensus 425 L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g 504 (623)
T PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504 (623)
T ss_pred CCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccc
Confidence 66666667777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCcccCC
Q 005586 179 GIPDSLGN 186 (689)
Q Consensus 179 ~~p~~~~~ 186 (689)
.+|..++.
T Consensus 505 ~iP~~l~~ 512 (623)
T PLN03150 505 RVPAALGG 512 (623)
T ss_pred cCChHHhh
Confidence 77766543
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.6e-19 Score=173.40 Aligned_cols=141 Identities=17% Similarity=0.154 Sum_probs=111.4
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCch-------------------------HHHHHHHHHHHHhccCCCcc
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS-------------------------EEAEFVKGLYLLTSLRHENI 468 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-------------------------~~~~f~~e~~~l~~l~H~ni 468 (689)
...||+|+||.||+|...+|+.||||+++...... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 36799999999999998889999999998653110 01234578999999999998
Q ss_pred eeEeeEEEcCCCCeEEEEEEcCCCCCHHHH-hhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCC
Q 005586 469 IRLRGFCCSRGRGECFLIYDFAPKGKLSKY-LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVE 546 (689)
Q Consensus 469 v~l~g~~~~~~~~~~~lV~e~~~~gsL~~~-L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~ 546 (689)
.....+... ..++||||++++++... +.. ..++..+...++.+++.++.|+|+ .+ |+||||||+
T Consensus 82 ~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~g-----ivHrDlkP~ 147 (190)
T cd05145 82 PVPEPILLK----KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEAG-----LVHGDLSEY 147 (190)
T ss_pred CCceEEEec----CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhCC-----EecCCCChh
Confidence 655544322 24899999998865433 332 136778889999999999999999 77 999999999
Q ss_pred ceeecCCCCeEEecccccccccC
Q 005586 547 KVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 547 NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
||+++ ++.++|+|||+++.+..
T Consensus 148 NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE-CCCEEEEEcccceecCC
Confidence 99999 88999999999986654
No 419
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.1e-21 Score=174.80 Aligned_cols=174 Identities=29% Similarity=0.488 Sum_probs=156.3
Q ss_pred CCCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEe
Q 005586 67 HRKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQ 146 (689)
Q Consensus 67 ~~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 146 (689)
..+++.|.|++|.|+ .+|+.+..|.+|+.|++++|+|+ .+|..++.|++|++|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 457899999999998 78899999999999999999999 89999999999999999999998 8999999999999999
Q ss_pred eecccCC-CCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCC
Q 005586 147 LCCNQLT-GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS 225 (689)
Q Consensus 147 Ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 225 (689)
|.+|++. ..+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|+.|.+++|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 9999997 478999999999999999999999 89999999999999999999998 89999999999999999999999
Q ss_pred cccchhHHhcc-----CccccccCCC
Q 005586 226 GIVPSALKRLN-----GGFQFQNNPG 246 (689)
Q Consensus 226 ~~~p~~~~~~~-----~~~~~~~n~~ 246 (689)
-..|+ +..+. ..+...+|||
T Consensus 187 vlppe-l~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 187 VLPPE-LANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred ecChh-hhhhhhhhhHHHHhhhhCCC
Confidence 66554 44332 1234556665
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=1.8e-18 Score=169.63 Aligned_cols=254 Identities=18% Similarity=0.205 Sum_probs=182.8
Q ss_pred cCCcccccccCCcceEEEEE-ecCCcEEEEEEecccCCchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEE
Q 005586 410 CFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.|...++||+|.||.++.|+ +-++..||||.=... .+.-+...|.+..+.+. .++|..++-| ...+.+-.+|+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYF--GqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYF--GQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeee--ccccchhhhhh
Confidence 47778999999999999997 457999999964432 23345667777777664 5788777533 34456678999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-----CCeEEeccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-----FNPLIADCG 562 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-----~~~kl~DfG 562 (689)
|.+ +.||+++..-... .++..++..||.|+..-++|+|+.. +|.|||||+|+||... ..+.|.|||
T Consensus 104 dLL-GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~k~-----LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHEKD-----LIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred hhh-CcCHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHhcc-----eeecccCccceeecCCCCCCCceEEEEecc
Confidence 998 8899999876543 4899999999999999999999988 9999999999999743 347899999
Q ss_pred ccccccCCce------eeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhc
Q 005586 563 LHKLLADDIV------FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 636 (689)
Q Consensus 563 la~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 636 (689)
+|+.+.+... .......||.+||+--...+.+-+.+-|.=|+|-|+++.+.|..|+.+.. .+......+.+-+
T Consensus 175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK-A~tnK~kYeKIGe 253 (449)
T KOG1165|consen 175 MAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK-ADTNKEKYEKIGE 253 (449)
T ss_pred chhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc-CcchHHHHHHhcc
Confidence 9998765432 12234568999999988889999999999999999999999999996531 1111222222222
Q ss_pred cccCCC---CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 637 RNLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 637 ~~~~~~---~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
..-... ..+..+.++..-+..--..+-.+-|..+-+..-+..
T Consensus 254 ~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 254 TKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 111100 112224445544444445677788888776555443
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=4.4e-19 Score=177.51 Aligned_cols=195 Identities=17% Similarity=0.237 Sum_probs=138.7
Q ss_pred CCCcceeEeeEEEcC-------------------------CCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHH
Q 005586 464 RHENIIRLRGFCCSR-------------------------GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 518 (689)
Q Consensus 464 ~H~niv~l~g~~~~~-------------------------~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia 518 (689)
+|||||++.++|+++ .+...|+||.-.+ -+|.++|.... .+...+.-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-----~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-----RSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-----CchHHHHHHH
Confidence 699999999887643 1245788988774 48999997643 4556677799
Q ss_pred HHHHHHHhhhhCCCCCCCceeecCCCCCceee--cCCCC--eEEecccccccccC-----CceeeeecCCCCCCCCCccc
Q 005586 519 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI--DQQFN--PLIADCGLHKLLAD-----DIVFSVLKTSAAMGYLAPEY 589 (689)
Q Consensus 519 ~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl--~~~~~--~kl~DfGla~~~~~-----~~~~~~~~~~~~~~y~aPE~ 589 (689)
.|+++|..|||..+ |.|||+|+.|||+ |+|.. ..|+|||.+---.. ..........|...-||||+
T Consensus 348 aQlLEav~hL~~hg-----vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 348 AQLLEAVTHLHKHG-----VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHHcc-----chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 99999999999988 9999999999999 44544 47899998642221 11111222234455899998
Q ss_pred cccCC------CCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCC
Q 005586 590 VTTGR------FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDP 663 (689)
Q Consensus 590 ~~~~~------~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp 663 (689)
....+ --.|+|.|+.|.+.||+++...||+...+.......+.+..-+ ..++.++..+.+++..-+++||
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP----alp~~vpp~~rqlV~~lL~r~p 498 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP----ALPSRVPPVARQLVFDLLKRDP 498 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC----CCcccCChHHHHHHHHHhcCCc
Confidence 76432 1369999999999999999999998643332222233222222 3455566678899999999999
Q ss_pred CCCCCHHHHH
Q 005586 664 ENRPTMEAVI 673 (689)
Q Consensus 664 ~~RPs~~evl 673 (689)
.+||+..-..
T Consensus 499 skRvsp~iAA 508 (598)
T KOG4158|consen 499 SKRVSPNIAA 508 (598)
T ss_pred cccCCccHHH
Confidence 9999865443
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=7e-19 Score=167.71 Aligned_cols=185 Identities=14% Similarity=0.056 Sum_probs=136.6
Q ss_pred cccccccCCcceEEEEEecCCcEEEEEEecccCCc---hHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEEE
Q 005586 413 EVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK---SEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
....|++|+||+||.+.- ++..++.+.+....-- .....|.+|+++|.++. |+++.+++++. ..+++||
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------~~~lvme 78 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------GRHLDRS 78 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------CEEEEEe
Confidence 357899999999997765 5778887877654321 11235889999999995 58899998862 3589999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCC-CCCceeecCCCCeEEecccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL-SVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dl-k~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
|+++.+|...+.. ....+..|++.+|.|+|+.+ |+|||| ||.|||+++++.++|+|||++...
T Consensus 79 yI~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~G-----IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 79 YLAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRCG-----VAHNDLAKEANWLVQEDGSPAVIDFQLAVRG 142 (218)
T ss_pred eecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHCc-----CccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence 9999998754321 11357789999999999988 999999 799999999999999999999855
Q ss_pred cCCcee----e--------eecCCCCCCCCCccccccC-CCC-CcccchhHHHHHHHHHhCCCCcch
Q 005586 568 ADDIVF----S--------VLKTSAAMGYLAPEYVTTG-RFT-ERSDIFAFGVIILQILTGSLVLTS 620 (689)
Q Consensus 568 ~~~~~~----~--------~~~~~~~~~y~aPE~~~~~-~~~-~ksDV~sfGvvl~elltG~~p~~~ 620 (689)
...... . ......+..|++|+...-. ..+ ...+.++-|.-+|.++|++.+..+
T Consensus 143 ~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 143 NPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 432210 0 0012245667777753221 223 567899999999999999988643
No 423
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=7.5e-20 Score=194.53 Aligned_cols=226 Identities=22% Similarity=0.340 Sum_probs=176.6
Q ss_pred ccccCCcceEEEEE----ecCCcEEEEEEecccCCchH-HHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEEEEc
Q 005586 416 LLGKGNFSSVYKGT----LRDGTLVAIRSINVTSCKSE-EAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYDF 489 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~----~~~g~~vavK~l~~~~~~~~-~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e~ 489 (689)
.+|+|.||.|+.++ .+.|..+|.|.+++...... ......|..++..++ ||.+|++.-.+ ..+...+++.+|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf--qt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF--QTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee--ccccchhHhhhh
Confidence 37899999999865 23578899998876543221 124566788888887 99999986544 345678999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 490 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 490 ~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
..+|+|...+.... .++..........+|-+++++|+.+ |+|||+|++||+++.+|++|+.|||+++...+
T Consensus 79 ~rgg~lft~l~~~~----~f~~~~~~~~~aelaLald~lh~l~-----iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEV----MFDELDVAFYLAELALALDHLHKLG-----IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred cccchhhhccccCC----chHHHHHHHHHHHHHHHHhhcchhH-----HHHhcccccceeecccCccccCCchhhhHhHh
Confidence 99999998887654 3667777788889999999999998 99999999999999999999999999997755
Q ss_pred CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHH
Q 005586 570 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 649 (689)
Q Consensus 570 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (689)
.... .||..|||||++. .....+|.||||++++||+||..||... .+..++. ....+|.+...
T Consensus 150 ~~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~--------~~~~Il~--~~~~~p~~l~~ 212 (612)
T KOG0603|consen 150 EKIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD--------TMKRILK--AELEMPRELSA 212 (612)
T ss_pred hhhc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH--------HHHHHhh--hccCCchhhhH
Confidence 4321 5788899999987 4678999999999999999999999751 1111211 12245666777
Q ss_pred HHHHHHHHhccCCCCCCCCH
Q 005586 650 KLGKMALVCTHEDPENRPTM 669 (689)
Q Consensus 650 ~l~~l~~~Cl~~dp~~RPs~ 669 (689)
.+..+.......+|..|--.
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHhhCHHHHhcc
Confidence 77888888888888888654
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=7.8e-18 Score=163.87 Aligned_cols=137 Identities=23% Similarity=0.328 Sum_probs=105.1
Q ss_pred CcccccccCCcceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhcc-----CCCcceeEeeEEEcCCC-CeEE
Q 005586 412 SEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-----RHENIIRLRGFCCSRGR-GECF 484 (689)
Q Consensus 412 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-----~H~niv~l~g~~~~~~~-~~~~ 484 (689)
...+.||+|+||.||. ++ ++.. +||++.... ....+++.+|++++.++ .||||++++|++....+ +..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 3457899999999996 44 4444 689887653 23456799999999999 57999999999855421 2333
Q ss_pred -EEEEc--CCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHH-hhhhCCCCCCCceeecCCCCCceeecC----CCCe
Q 005586 485 -LIYDF--APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI-GYLHSSEVNKPAIVHRNLSVEKVLIDQ----QFNP 556 (689)
Q Consensus 485 -lV~e~--~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL-~yLH~~~~~~~~ivH~dlk~~NiLl~~----~~~~ 556 (689)
+|+|| +++|+|.+++.... +++. ..++.+++.++ +|||+.+ |+||||||+|||++. ++.+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~~-----IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDNR-----IVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHCC-----EeecCCCHHHEEEeccCCCCCcE
Confidence 78999 66899999996531 4544 35678888888 9999988 999999999999974 3479
Q ss_pred EEeccccc
Q 005586 557 LIADCGLH 564 (689)
Q Consensus 557 kl~DfGla 564 (689)
+|+||+-+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995433
No 425
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.76 E-value=5.1e-20 Score=192.02 Aligned_cols=192 Identities=23% Similarity=0.269 Sum_probs=168.2
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
++..|+|..|+++..-.+.+.+|+.|+.|+||+|.|+...++++..+++|++|+||+|+|+..-+..|..|.+|++|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 57788888888888888888999999999999999999999999999999999999999997778889999999999999
Q ss_pred cccCCCCCchhcCCCCCCCEEeccCCcCCCCCCc---ccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCC
Q 005586 149 CNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPD---SLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS 225 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~---~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 225 (689)
+|.++..--..|..+.+|++|||++|.|++.|-+ .|..|++|+.|+|.+|+|....-.+|.++..|++|||.+|.|.
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcce
Confidence 9999877777888999999999999999988765 4778999999999999999666689999999999999999999
Q ss_pred cccchhHHhccC-ccccccCCCCCCCCCCCCccccc
Q 005586 226 GIVPSALKRLNG-GFQFQNNPGLCGDGIASLRACTV 260 (689)
Q Consensus 226 ~~~p~~~~~~~~-~~~~~~n~~~c~~~~~~l~~~~~ 260 (689)
.+-|++|..+.- .+.+..-..+|+|.+.++...-.
T Consensus 430 SIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl~ 465 (873)
T KOG4194|consen 430 SIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQWLY 465 (873)
T ss_pred eecccccccchhhhhhhcccceEEeccHHHHHHHHH
Confidence 999999987632 35566667899999988776543
No 426
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=1.6e-17 Score=166.87 Aligned_cols=234 Identities=19% Similarity=0.286 Sum_probs=150.0
Q ss_pred cccccccCCcceEEEEEec-CCcEEEEEEecccCC--chHHHHHHHHHHHHhccCC-----------CcceeEeeEEEc-
Q 005586 413 EVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRH-----------ENIIRLRGFCCS- 477 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~f~~e~~~l~~l~H-----------~niv~l~g~~~~- 477 (689)
..+.||.|+++.||.+.+. +|+.+|+|.+..... ....+++.+|.-....+.+ .-++++--.-..
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3578999999999999986 589999999865442 3345677777765555333 222222111111
Q ss_pred ------CCC--C-----eEEEEEEcCCCCCHHHHhhh---cCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeec
Q 005586 478 ------RGR--G-----ECFLIYDFAPKGKLSKYLDQ---EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHR 541 (689)
Q Consensus 478 ------~~~--~-----~~~lV~e~~~~gsL~~~L~~---~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~ 541 (689)
... . ..+++|+-+ .+||.+++.. .......+....|+.+..|+.+.+++||+.| ++|+
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-----lVHg 169 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-----LVHG 169 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-----EEES
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-----eEec
Confidence 000 1 236677777 5688888642 2222223556678889999999999999998 9999
Q ss_pred CCCCCceeecCCCCeEEecccccccccCCceeeeecCCCCCCCCCcccccc--------CCCCCcccchhHHHHHHHHHh
Q 005586 542 NLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT--------GRFTERSDIFAFGVIILQILT 613 (689)
Q Consensus 542 dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~ksDV~sfGvvl~ellt 613 (689)
||||+|++++++|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|.+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999877655442211 233466999997643 247889999999999999999
Q ss_pred CCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCC
Q 005586 614 GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENR 666 (689)
Q Consensus 614 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~R 666 (689)
|+.|+........... .+. ...+.++.+..++...++.+|++|
T Consensus 246 ~~lPf~~~~~~~~~~~--------~f~--~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW--------DFS--RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG--------GGT--TSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc--------cch--hcCCcCHHHHHHHHHHccCCcccC
Confidence 9999974422111111 111 122567789999999999999987
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=6.8e-17 Score=157.68 Aligned_cols=147 Identities=18% Similarity=0.129 Sum_probs=112.9
Q ss_pred HHHHHHhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCc---------------------hHHHHHHHHHHHH
Q 005586 402 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK---------------------SEEAEFVKGLYLL 460 (689)
Q Consensus 402 ~~l~~at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------------~~~~~f~~e~~~l 460 (689)
+++......|...+.||+|+||.||+|..++|+.||||++...... .....+..|...+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 3444444447778999999999999999888999999987653210 0112367788999
Q ss_pred hccCCCc--ceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCce
Q 005586 461 TSLRHEN--IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAI 538 (689)
Q Consensus 461 ~~l~H~n--iv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~i 538 (689)
.++.|++ +...++. ...++||||+++++|...... .....++.+++.++.++|+.+ |
T Consensus 88 ~~l~~~~i~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~g-----i 146 (198)
T cd05144 88 KALYEEGFPVPKPIDW------NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHG-----I 146 (198)
T ss_pred HHHHHcCCCCCceeec------CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCC-----C
Confidence 9998874 4444432 345899999999998765421 223568899999999999977 9
Q ss_pred eecCCCCCceeecCCCCeEEecccccccccC
Q 005586 539 VHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 539 vH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
+||||||.||+++++++++|+|||++.....
T Consensus 147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 147 IHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999999999875543
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.2e-16 Score=157.75 Aligned_cols=135 Identities=14% Similarity=0.284 Sum_probs=111.8
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCch-------HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS-------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
+.||+|++|.||+|.. +|..|++|+........ ....+.+|++++..++|+++.....++... ...++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCCEEEE
Confidence 5799999999999988 57789999865433211 124688899999999999988777776443 5678999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
||+++++|.+++... .+ .+..++.+++.+|.++|+.+ ++|||++|.|||++ ++.++|+|||.++.
T Consensus 79 e~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~~-----i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSAG-----IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhCC-----cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998642 22 78899999999999999987 99999999999999 78999999998864
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1e-16 Score=180.10 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=110.5
Q ss_pred hccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCc------hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCC
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK------SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 481 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~ 481 (689)
...|...+.||+|+||.||+|.+.+...++.++....... .....+.+|++++.+++|++++....++... .
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP--E 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--C
Confidence 3445567899999999999998865443333323221111 1235688999999999999999887777543 4
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++||||+++++|.+++. .+..++.+++++|.|||+.+ |+||||||+|||+ +++.++|+||
T Consensus 410 ~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g-----iiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG-----IVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred CCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC-----CccCCCChHHEEE-ECCcEEEEeC
Confidence 5789999999999999875 34678999999999999987 9999999999999 6789999999
Q ss_pred cccccc
Q 005586 562 GLHKLL 567 (689)
Q Consensus 562 Gla~~~ 567 (689)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 998753
No 430
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.4e-16 Score=159.08 Aligned_cols=144 Identities=15% Similarity=0.101 Sum_probs=109.9
Q ss_pred cCCcccccccCCcceEEEEE--ecCCcEEEEEEecccCCc-------------------h----HHHHHHHHHHHHhccC
Q 005586 410 CFSEVNLLGKGNFSSVYKGT--LRDGTLVAIRSINVTSCK-------------------S----EEAEFVKGLYLLTSLR 464 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~l~~~~~~-------------------~----~~~~f~~e~~~l~~l~ 464 (689)
.|...+.||+|+||.||+|. ..+|+.||+|+++..... . ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999998 568999999998754210 0 1124568999999997
Q ss_pred CCc--ceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecC
Q 005586 465 HEN--IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRN 542 (689)
Q Consensus 465 H~n--iv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~d 542 (689)
+.. +.+++++ ...++||||+++++|........ .++..+...++.|++.+++|||+.+. |+|||
T Consensus 109 ~~~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~g~----iiH~D 174 (237)
T smart00090 109 EAGVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLYKEGE----LVHGD 174 (237)
T ss_pred hcCCCCCeeeEe------cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHHhcCC----EEeCC
Confidence 643 3344432 12479999999988876643221 24555678899999999999998763 89999
Q ss_pred CCCCceeecCCCCeEEeccccccccc
Q 005586 543 LSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 543 lk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|||+||+++ ++.++|+|||.+....
T Consensus 175 ikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 175 LSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999 8899999999987544
No 431
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.69 E-value=2.5e-18 Score=172.23 Aligned_cols=199 Identities=22% Similarity=0.257 Sum_probs=156.4
Q ss_pred ceEEcCC----------CCCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecc-cCC
Q 005586 60 EGIACNE----------HRKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDV-NNL 128 (689)
Q Consensus 60 ~gv~C~~----------~~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l 128 (689)
.-|.|+. ....+.|+|..|+|+-..|.+|+.|.+|+.||||+|+|+-+-|+.|.+|++|..|-+.+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 4478863 34679999999999988889999999999999999999999999999999988886655 999
Q ss_pred CCCCCccccCCccccEEeeecccCCCCC----------------------------------------------------
Q 005586 129 SGNIPPEIGSMASLQVLQLCCNQLTGNI---------------------------------------------------- 156 (689)
Q Consensus 129 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~---------------------------------------------------- 156 (689)
+...-..|++|.+|+.|.+.-|++.-..
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 8433334555544444333332222100
Q ss_pred ---------------------------------------------------------c-hhcCCCCCCCEEeccCCcCCC
Q 005586 157 ---------------------------------------------------------P-AQIGSLKSLSVLTLQHNRLNG 178 (689)
Q Consensus 157 ---------------------------------------------------------p-~~~~~l~~L~~L~l~~N~l~~ 178 (689)
| ..|..|++|++|+|++|++++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 0 124556788999999999998
Q ss_pred CCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchhHHhccC--ccccccCCCCCCCCCCCCc
Q 005586 179 GIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLR 256 (689)
Q Consensus 179 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~ 256 (689)
.-+.+|..+..++.|.|..|+|...-...|.++..|+.|+|.+|+|+..-|.+|..+.. .+.+..||+.|.|.+.++.
T Consensus 289 i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~ 368 (498)
T KOG4237|consen 289 IEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLG 368 (498)
T ss_pred hhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHH
Confidence 88888999999999999999988666678889999999999999999999999987654 5678899999999988776
Q ss_pred cc
Q 005586 257 AC 258 (689)
Q Consensus 257 ~~ 258 (689)
..
T Consensus 369 ~W 370 (498)
T KOG4237|consen 369 EW 370 (498)
T ss_pred HH
Confidence 54
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=2e-17 Score=172.86 Aligned_cols=171 Identities=21% Similarity=0.343 Sum_probs=131.1
Q ss_pred eEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecc
Q 005586 482 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 561 (689)
Q Consensus 482 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~Df 561 (689)
..++.|+++...+|.+||..... ....+|...+.++.|++.|++| ++ .+|||+||.||+...+.++||.||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k~-----~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---KG-----LIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---cc-----chhhhccccccccccchhhhhhhh
Confidence 57899999999999999975443 3457888999999999999999 45 799999999999999999999999
Q ss_pred cccccccCCc-----eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHh-CCCCcchhHHHHHhhhhhhHhh
Q 005586 562 GLHKLLADDI-----VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFI 635 (689)
Q Consensus 562 Gla~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 635 (689)
|+...+.... ........+|..||+||.+.+..|+.|+|+||+|++|+|+++ -..++. ..+.+.++-
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------r~~t~~d~r 473 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------RIATLTDIR 473 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-------HHHhhhhhh
Confidence 9988776543 233445678899999999999999999999999999999997 222111 112222222
Q ss_pred cc----ccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 005586 636 DR----NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVI 673 (689)
Q Consensus 636 ~~----~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl 673 (689)
|. .....++ +-..+..+++.+.|++||++.++.
T Consensus 474 ~g~ip~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 474 DGIIPPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred cCCCChHHhhcCc-----HHHHHHHHhcCCCcccCchHHHHh
Confidence 22 2222233 235688899999999999655553
No 433
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.3e-16 Score=154.12 Aligned_cols=131 Identities=18% Similarity=0.288 Sum_probs=104.9
Q ss_pred ccccCCcceEEEEEecCCcEEEEEEecccCCc-------hHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEE
Q 005586 416 LLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-------SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 488 (689)
Q Consensus 416 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 488 (689)
.||+|+||.||+|.+ +|..|++|+....... ....++.+|++++..++|+++.....++... ...++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEE
Confidence 489999999999996 4788999986543211 1235678899999999988765554444333 45689999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 489 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 489 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
|+++++|.+++.... . .++.+++.+|.+||+.+ ++|||++|.||+++ ++.+++.|||+++.
T Consensus 78 ~~~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~~g-----i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN-----D------ELLREIGRLVGKLHKAG-----IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH-----H------HHHHHHHHHHHHHHHCC-----eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999875421 1 78999999999999987 99999999999999 88999999998865
No 434
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=2.1e-16 Score=180.03 Aligned_cols=194 Identities=19% Similarity=0.265 Sum_probs=150.6
Q ss_pred HHhccCCcccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccC---CCcceeEeeEEEcCCCCe
Q 005586 406 SATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR---HENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 406 ~at~~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~ 482 (689)
..-+.|.+.+.||+|+||+||+|...+|+.||+|+=+..... +|.--.+++.||+ -+-|..+...+. ..+.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W----EfYI~~q~~~RLk~~~~~~~~~~~~a~~--~~~~ 768 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW----EFYICLQVMERLKPQMLPSIMHISSAHV--FQNA 768 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce----eeeehHHHHHhhchhhhcchHHHHHHHc--cCCc
Confidence 344677888999999999999999988999999987655432 2333334455555 111222222221 1356
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeec-------CCCC
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-------QQFN 555 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~-------~~~~ 555 (689)
.++|+||.+.|+|.+++... ..++|...+.++.|+++-+++||..+ |||+||||+|.||. +...
T Consensus 769 S~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~~~-----IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHAMG-----IIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred ceeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHhcc-----eecccCCcceeEeecccCCCCcccc
Confidence 78999999999999999843 35999999999999999999999988 99999999999995 2345
Q ss_pred eEEecccccccc---cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCC
Q 005586 556 PLIADCGLHKLL---ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 616 (689)
Q Consensus 556 ~kl~DfGla~~~---~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~ 616 (689)
++|+|||-+-.| .+. .......+|-++-.+|...++.++.+.|-|.+.-+++-|+-|+.
T Consensus 840 l~lIDfG~siDm~lfp~~--~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEEEecccceeeeEcCCC--cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 799999998755 232 24445567778999999999999999999999999999999974
No 435
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.65 E-value=1.4e-17 Score=174.83 Aligned_cols=162 Identities=29% Similarity=0.389 Sum_probs=80.4
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
.++.|+|++|.|+ ..|..+..-.++-+|+||+|+|..+...-|.+|+.|-+||||+|+|. .+|+.+..|..|+.|+|+
T Consensus 104 dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 104 DLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred cceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 4556666666655 45555555555555555555555222233445555555555555555 445554444444444444
Q ss_pred cc-------------------------------------------------cCCCCCchhcCCCCCCCEEeccCCcCCCC
Q 005586 149 CN-------------------------------------------------QLTGNIPAQIGSLKSLSVLTLQHNRLNGG 179 (689)
Q Consensus 149 ~N-------------------------------------------------~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (689)
+| .|. .+|+.+.++.+|+.|+||+|+++ .
T Consensus 182 ~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-e 259 (1255)
T KOG0444|consen 182 NNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-E 259 (1255)
T ss_pred CChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-e
Confidence 44 443 34444444444444444444444 3
Q ss_pred CCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCC-cccchhHHhc
Q 005586 180 IPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS-GIVPSALKRL 235 (689)
Q Consensus 180 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~-~~~p~~~~~~ 235 (689)
+....+...+|++|+||.|+|+ .+|..+..+++|+.|.+.+|+|+ .-+|+.++.+
T Consensus 260 L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 260 LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 3333334444444445555554 45555555555555555555553 2234444433
No 436
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.63 E-value=1.2e-16 Score=167.09 Aligned_cols=165 Identities=22% Similarity=0.258 Sum_probs=79.6
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
++..|+|++|.|+..--..|.+|.+|.+|-|+.|+++...+..|.+|++|+.|+|..|++.-.---.|.+|++|+.|.|.
T Consensus 174 ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklq 253 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQ 253 (873)
T ss_pred CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhh
Confidence 34555555555554444455555555555555555554444445555555555555555541112233333333333333
Q ss_pred cccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCccc
Q 005586 149 CNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIV 228 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~ 228 (689)
.|.++..-...|..|.++++|+|+.|+++..--.++.+|++|+.|+||+|.+...-++++....+|+.|+|++|+|+...
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~ 333 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLD 333 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCC
Confidence 33333222233334444455555555555444444555555555555555555444555555555555555555555555
Q ss_pred chhHH
Q 005586 229 PSALK 233 (689)
Q Consensus 229 p~~~~ 233 (689)
++.|.
T Consensus 334 ~~sf~ 338 (873)
T KOG4194|consen 334 EGSFR 338 (873)
T ss_pred hhHHH
Confidence 54443
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.62 E-value=2.3e-17 Score=147.30 Aligned_cols=153 Identities=28% Similarity=0.455 Sum_probs=136.6
Q ss_pred cCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCC
Q 005586 88 LSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLS 167 (689)
Q Consensus 88 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 167 (689)
+.++++.+.|-||+|+|+ .+|+.+..|.+|+.|++++|+++ .+|..+..++.|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 456788889999999999 78889999999999999999999 89999999999999999999998 8999999999999
Q ss_pred EEeccCCcCCC-CCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchhHHhccC--ccccccC
Q 005586 168 VLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNN 244 (689)
Q Consensus 168 ~L~l~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~~~~~~~--~~~~~~n 244 (689)
.|||++|+++. .+|..|..+..|+.|+|++|.|. .+|..++.+++|+.|.+..|.+- .+|..++.+.. .+..++|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 99999999974 57999999999999999999999 88889999999999999999987 45666665543 4566666
Q ss_pred C
Q 005586 245 P 245 (689)
Q Consensus 245 ~ 245 (689)
.
T Consensus 184 r 184 (264)
T KOG0617|consen 184 R 184 (264)
T ss_pred e
Confidence 4
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=1e-15 Score=170.81 Aligned_cols=206 Identities=23% Similarity=0.350 Sum_probs=138.6
Q ss_pred ccCCcccccccCCcceEEEEEecC-CcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
.+|..++.|..|+||.||..+++. .+..|. ++++... ++ +||..+. +..++|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l------------il-----Rnilt~a--------~npfvv- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL------------IL-----RNILTFA--------GNPFVV- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccch------------hh-----hcccccc--------CCccee-
Confidence 567788999999999999999873 566776 3332210 11 1233222 122333
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
||-...++..+. ++- +++.+++|||+.+ |+|||+||.|.+++.-|++|+.|||+++.-
T Consensus 136 -----gDc~tllk~~g~----lPv--------dmvla~Eylh~yg-----ivhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP----LPV--------DMVLAVEYLHSYG-----IVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred -----chhhhhcccCCC----Ccc--------hhhHHhHhhccCC-----eecCCCCCCcceeeecccccccchhhhhhh
Confidence 555555543221 221 2278899999987 999999999999999999999999998753
Q ss_pred cC--------Cc------eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH
Q 005586 568 AD--------DI------VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 568 ~~--------~~------~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~ 633 (689)
-. +. ........+|+.|+|||++....|...+|+|++|+++||.+.|..||........ +..
T Consensus 194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel----fg~ 269 (1205)
T KOG0606|consen 194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL----FGQ 269 (1205)
T ss_pred hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH----Hhh
Confidence 11 10 1112235789999999999999999999999999999999999999976532211 111
Q ss_pred hhccc-cCCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 005586 634 FIDRN-LKGKFSESEAAKLGKMALVCTHEDPENRP 667 (689)
Q Consensus 634 ~~~~~-~~~~~~~~~~~~l~~l~~~Cl~~dp~~RP 667 (689)
++... ...+-.+....++.+++.+-++.+|.+|-
T Consensus 270 visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 270 VISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 21111 11111233345677788888888998884
No 439
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.59 E-value=1.4e-16 Score=167.38 Aligned_cols=153 Identities=31% Similarity=0.424 Sum_probs=116.7
Q ss_pred CCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCC-CCCCccccCCccccEEe
Q 005586 68 RKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLS-GNIPPEIGSMASLQVLQ 146 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 146 (689)
.+++.|.|...+|. .+|.+++.|.+|++|.+++|+|. .+-.+++.|+.|+.+++..|+|. .-||.++..|..|+.||
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 46777777777765 67778888888888888888877 55567777888888888888776 23677788888888888
Q ss_pred eecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcc-cCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCC
Q 005586 147 LCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDS-LGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS 225 (689)
Q Consensus 147 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 225 (689)
||+|+|. ..|..+..-.++-.|+||+|++. .||.. |.+|..|-.||||+|+|. .+|..+..+..|++|+|++|.|.
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhh
Confidence 8888887 67777777788888888888887 55554 567778888888888887 56666777888888888888764
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=8e-15 Score=141.72 Aligned_cols=138 Identities=18% Similarity=0.188 Sum_probs=98.2
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCch-HHHHH----------------------HHHHHHHhccCCCc--c
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS-EEAEF----------------------VKGLYLLTSLRHEN--I 468 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~~~~f----------------------~~e~~~l~~l~H~n--i 468 (689)
.+.||+|+||.||+|...+|+.||||++....... ....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 36799999999999998889999999987543211 11111 34566666665443 3
Q ss_pred eeEeeEEEcCCCCeEEEEEEcCCCCCHHHH-hhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhC-CCCCCCceeecCCCCC
Q 005586 469 IRLRGFCCSRGRGECFLIYDFAPKGKLSKY-LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVE 546 (689)
Q Consensus 469 v~l~g~~~~~~~~~~~lV~e~~~~gsL~~~-L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~~~ivH~dlk~~ 546 (689)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. .+ |+||||||+
T Consensus 82 ~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~~-----ivH~Dl~p~ 144 (187)
T cd05119 82 PKPIDL------NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREAG-----LVHGDLSEY 144 (187)
T ss_pred CceEec------CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhccC-----cCcCCCChh
Confidence 333332 235899999999654321 21110 11 4567899999999999998 66 999999999
Q ss_pred ceeecCCCCeEEecccccccccC
Q 005586 547 KVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 547 NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
||+++ ++.++++|||.+.....
T Consensus 145 Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 145 NILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred hEEEE-CCcEEEEECcccccccC
Confidence 99999 89999999999875543
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=2e-14 Score=133.11 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=111.3
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCC--CcceeEeeEEEcCCCCeEEEEEEcCC
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH--ENIIRLRGFCCSRGRGECFLIYDFAP 491 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~~~lV~e~~~ 491 (689)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++| .++.+++++.. ..+..++++||++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~--~~~~~~~v~e~~~ 76 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGE--SDGWSYLLMEWIE 76 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcC--CCCccEEEEEecC
Confidence 4679999999999999864 7899999866542 4578899999999977 58888888763 3467899999998
Q ss_pred CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 492 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 492 ~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
++.+..+ ++.....++.+++++++++|... ...++|+|++|.||++++.+.+++.|||.++..
T Consensus 77 g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~--~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 77 GETLDEV-----------SEEEKEDIAEQLAELLAKLHQLP--LLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred CeecccC-----------CHHHHHHHHHHHHHHHHHHhCCC--ceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 8766543 45667789999999999999853 245999999999999999999999999988643
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=3.2e-14 Score=142.36 Aligned_cols=138 Identities=15% Similarity=0.133 Sum_probs=106.3
Q ss_pred ccccc-cCCcceEEEEEecCCcEEEEEEecccCC------------chHHHHHHHHHHHHhccCCCcc--eeEeeEEEcC
Q 005586 414 VNLLG-KGNFSSVYKGTLRDGTLVAIRSINVTSC------------KSEEAEFVKGLYLLTSLRHENI--IRLRGFCCSR 478 (689)
Q Consensus 414 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------~~~~~~f~~e~~~l~~l~H~ni--v~l~g~~~~~ 478 (689)
...|| .||.|+||.+... +..++||++..... ......+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999886 67889998853210 1223568889999999998885 6677765433
Q ss_pred CCC--eEEEEEEcCCC-CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC
Q 005586 479 GRG--ECFLIYDFAPK-GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 555 (689)
Q Consensus 479 ~~~--~~~lV~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~ 555 (689)
... ..++|+||+++ .+|.+++... .++.. .+.+++.+|.+||+.+ |+||||||.|||++.++.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~G-----I~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDAG-----VYHADLNAHNILLDPDGK 180 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHCC-----CCCCCCCchhEEEcCCCC
Confidence 221 23599999997 6999988642 24433 3568999999999988 999999999999999999
Q ss_pred eEEeccccccc
Q 005586 556 PLIADCGLHKL 566 (689)
Q Consensus 556 ~kl~DfGla~~ 566 (689)
++|+|||.++.
T Consensus 181 v~LIDfg~~~~ 191 (239)
T PRK01723 181 FWLIDFDRGEL 191 (239)
T ss_pred EEEEECCCccc
Confidence 99999998764
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.2e-14 Score=142.76 Aligned_cols=207 Identities=21% Similarity=0.300 Sum_probs=142.5
Q ss_pred HHhccCCCcceeEeeEEEcCC---CCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCC
Q 005586 459 LLTSLRHENIIRLRGFCCSRG---RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 535 (689)
Q Consensus 459 ~l~~l~H~niv~l~g~~~~~~---~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 535 (689)
-|-++.|.|||++..|+.+.. ..+..++.|||..|++..+|+........+....-.+++.||..||.|||+ |.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs---~~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS---CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc---cC
Confidence 455667999999999885432 345789999999999999998765444456667778899999999999998 46
Q ss_pred CceeecCCCCCceeecCCCCeEEecccccccccC---CceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHH
Q 005586 536 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD---DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 612 (689)
Q Consensus 536 ~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~ell 612 (689)
|||+|+++.-+-|++..++-+|+.--........ ..........+-++|.+||+-.....+..+|||+||...+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 9999999999999999999888753221111100 0000111234557899999887777888999999999999998
Q ss_pred hCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 613 TGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 613 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.+..-.......... ++.+.....+ .+...-...+..|++..|..||+|++++.+.
T Consensus 277 ilEiq~tnseS~~~~----ee~ia~~i~~----len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEV----EENIANVIIG----LENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeeh----hhhhhhheee----ccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 876542211111111 1111111100 0011123466789999999999999998664
No 444
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.51 E-value=2e-16 Score=158.78 Aligned_cols=169 Identities=27% Similarity=0.381 Sum_probs=125.4
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
.+..++..+|+++ .+|+.++++..|..|++.+|++....|..+. ++.|++||...|-++ .+|++++.|.+|..|||.
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~ 214 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLR 214 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhh
Confidence 3455666677776 6777778888888888888888855554444 888888888888887 788888888888888888
Q ss_pred cccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccC-CCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcc
Q 005586 149 CNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLG-NLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGI 227 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~ 227 (689)
.|++. .+| +|.++..|.+|+++.|++. .+|.... ++.+|..|||..|+++ ..|+.+.-+.+|.+||+++|.+++.
T Consensus 215 ~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~L 290 (565)
T KOG0472|consen 215 RNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSL 290 (565)
T ss_pred hcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccC
Confidence 88887 666 7888888888888888887 6776655 7888888888888888 7788888888888888888888876
Q ss_pred cchhHHhcc-CccccccCC
Q 005586 228 VPSALKRLN-GGFQFQNNP 245 (689)
Q Consensus 228 ~p~~~~~~~-~~~~~~~n~ 245 (689)
.+. ++.+. ..+.+.|||
T Consensus 291 p~s-LgnlhL~~L~leGNP 308 (565)
T KOG0472|consen 291 PYS-LGNLHLKFLALEGNP 308 (565)
T ss_pred Ccc-cccceeeehhhcCCc
Confidence 543 33331 134455554
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.50 E-value=1.4e-15 Score=152.87 Aligned_cols=152 Identities=32% Similarity=0.440 Sum_probs=136.3
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEE-EccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGL-YLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQL 147 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L-~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 147 (689)
-|+.+++++|+|. .+|..+..+..+.+. ++++|.+ +.+|..++.+++|..|+|++|-+. .+|.+++.+..||.||+
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~Lnl 465 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNL 465 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecc
Confidence 3899999999997 788888888877664 5555555 599999999999999999999998 89999999999999999
Q ss_pred ecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCC
Q 005586 148 CCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS 225 (689)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 225 (689)
|.|+|. .+|..+..+..|+.+-.++|++...-|+.+.+|.+|.+|||.+|.+. .+|..++++.+|++|++.+|+|.
T Consensus 466 S~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 466 SFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 999998 89999888888998888889999655666999999999999999999 88999999999999999999998
No 446
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=1.3e-15 Score=159.47 Aligned_cols=167 Identities=32% Similarity=0.510 Sum_probs=89.3
Q ss_pred EEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeec
Q 005586 70 VANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCC 149 (689)
Q Consensus 70 v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 149 (689)
.+..+|+.|.++ .+|..++.+..|+.|.|..|.+. .+|..+.+|..|++|||+.|+++ .+|..++.|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 445566666665 45555555555555555555555 55555555555555555555555 5555555554 55555555
Q ss_pred ccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccc
Q 005586 150 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVP 229 (689)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p 229 (689)
|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|+.+..++ |..||++.|+++ .+|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iP 227 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLP 227 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecc
Confidence 5554 45555555555555555555555 45555555555555555555555 3444444332 555555555554 334
Q ss_pred hhHHhccC--ccccccCC
Q 005586 230 SALKRLNG--GFQFQNNP 245 (689)
Q Consensus 230 ~~~~~~~~--~~~~~~n~ 245 (689)
-.|..+.. .+.+.+||
T Consensus 228 v~fr~m~~Lq~l~LenNP 245 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNP 245 (722)
T ss_pred hhhhhhhhheeeeeccCC
Confidence 44444432 23444444
No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=3.8e-13 Score=146.22 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=106.3
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCch---------------------------------------HH
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS---------------------------------------EE 450 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---------------------------------------~~ 450 (689)
.|+ .+.||.|++|.||+|++++|+.||||+.+....+. .+
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36899999999999999999999999986542100 01
Q ss_pred HHHHHHHHHHhcc----CCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHH-HH
Q 005586 451 AEFVKGLYLLTSL----RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK-GI 525 (689)
Q Consensus 451 ~~f~~e~~~l~~l----~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~-gL 525 (689)
-+|..|.+.+.++ +|.+-+.+-..+.+- ....++||||+++++|.++....... . .+.+++..++. .+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l 270 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFL 270 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHH
Confidence 1355566655555 244444444444322 34579999999999999887543211 2 24567777766 47
Q ss_pred hhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 526 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 526 ~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
.++|..+ ++|+|++|.||++++++.+++.|||+++.+.+
T Consensus 271 ~ql~~~g-----~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 271 NQVLRDG-----FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHhCC-----ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8889877 99999999999999999999999999987754
No 448
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.5e-14 Score=162.04 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=180.1
Q ss_pred CCcccccccCCcceEEEEEec--CCcEEEEEEecccC-CchHHHHHHHHHHHHhccC-CCcceeEeeEEEcCCCCeEEEE
Q 005586 411 FSEVNLLGKGNFSSVYKGTLR--DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLI 486 (689)
Q Consensus 411 f~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~-~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 486 (689)
|...+.||+|.|+.|-..... ....+|+|.+.... ..........|..+=..+. |+|++.+++.. ...+..+++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~--~~~~~~~~~ 99 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS--SSPRSYLLS 99 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc--CCCcccccc
Confidence 445567999999999888754 34556666665443 1122233344666656665 99999999977 556788999
Q ss_pred EEcCCCCCHHHHh-hhcCCCCCCCCHHHHHHHHHHHHHHHhhhh-CCCCCCCceeecCCCCCceeecCCC-CeEEecccc
Q 005586 487 YDFAPKGKLSKYL-DQEEGSSNVLDWSTRVSIIIGIAKGIGYLH-SSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGL 563 (689)
Q Consensus 487 ~e~~~~gsL~~~L-~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~~~~~~ivH~dlk~~NiLl~~~~-~~kl~DfGl 563 (689)
.||.++|++.+-+ +.... ..+-.....+..|+..++.|+| ..+ +.|||+||+|.+++..+ ..|++|||+
T Consensus 100 ~~~s~g~~~f~~i~~~~~~---~~~~~~~~~~~~ql~s~l~~~H~~~~-----~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDST---GTSSSSASRYLPQLNSGLSYLHPENG-----VTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred cCcccccccccccccCCcc---CCCCcchhhhhhhhccCccccCcccc-----cccCCCCCccchhccCCCcccCCCchh
Confidence 9999999999888 43321 2344455678899999999999 666 89999999999999999 999999999
Q ss_pred cccccC--CceeeeecCCC-CCCCCCccccccC-CCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 564 HKLLAD--DIVFSVLKTSA-AMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 564 a~~~~~--~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|..+.. +.........| ++-|+|||...+. ...+..|+||.|+++.-+++|..|.......... +..+.....
T Consensus 172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~---~~~~~~~~~ 248 (601)
T KOG0590|consen 172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR---YSSWKSNKG 248 (601)
T ss_pred hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc---ceeeccccc
Confidence 987655 33334444556 8889999998874 4467899999999999999999998654322211 111111110
Q ss_pred --CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 005586 640 --KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 676 (689)
Q Consensus 640 --~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L 676 (689)
.............++...++..+|..|.+.+++..+-
T Consensus 249 ~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~ 287 (601)
T KOG0590|consen 249 RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDN 287 (601)
T ss_pred ccccCccccCChhhhhcccccccCCchhccccccccccc
Confidence 1111223345567777888889999999998886553
No 449
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.45 E-value=2.8e-13 Score=153.89 Aligned_cols=72 Identities=33% Similarity=0.438 Sum_probs=34.5
Q ss_pred CCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchhHHhccC--ccccc
Q 005586 165 SLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQ 242 (689)
Q Consensus 165 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~~~~~~~--~~~~~ 242 (689)
+|+.|+|++|+|+ .+|... ++|+.|++++|+|++ +|... .+|+.|++++|+|+ .+|..+..+.. .+.+.
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCcc---cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 4556666666665 344322 345555666665553 34321 23445555555555 34444443332 23444
Q ss_pred cCC
Q 005586 243 NNP 245 (689)
Q Consensus 243 ~n~ 245 (689)
+|+
T Consensus 454 ~N~ 456 (788)
T PRK15387 454 GNP 456 (788)
T ss_pred CCC
Confidence 444
No 450
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.38 E-value=8.1e-13 Score=150.99 Aligned_cols=143 Identities=27% Similarity=0.445 Sum_probs=86.3
Q ss_pred CCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEee
Q 005586 68 RKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQL 147 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 147 (689)
.+++.|+|++|.|+ .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 220 ~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~L 290 (754)
T PRK15370 220 GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSV 290 (754)
T ss_pred cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEEC
Confidence 46788888888887 4565443 46777888888777 5666553 46777777777777 4666554 46777777
Q ss_pred ecccCCCCCchhcCC-------------------CCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhh
Q 005586 148 CCNQLTGNIPAQIGS-------------------LKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESL 208 (689)
Q Consensus 148 s~N~l~g~~p~~~~~-------------------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l 208 (689)
++|+|++ +|..+.. .++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+
T Consensus 291 s~N~Lt~-LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l 365 (754)
T PRK15370 291 YDNSIRT-LPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL 365 (754)
T ss_pred CCCcccc-CcccchhhHHHHHhcCCccccCCccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh
Confidence 7777763 3433220 1345555555555552 444332 45666666666655 344433
Q ss_pred hCCCCCcEEecccCcCCc
Q 005586 209 ANNAELLFLDVQNNTLSG 226 (689)
Q Consensus 209 ~~~~~L~~l~l~~N~l~~ 226 (689)
. ++|+.|+|++|+|+.
T Consensus 366 p--~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 366 P--PTITTLDVSRNALTN 381 (754)
T ss_pred c--CCcCEEECCCCcCCC
Confidence 2 456666666666654
No 451
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=2.7e-14 Score=149.63 Aligned_cols=154 Identities=30% Similarity=0.509 Sum_probs=140.9
Q ss_pred EEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeec
Q 005586 70 VANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCC 149 (689)
Q Consensus 70 v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 149 (689)
+..+.|..|.+. .+|..+++|..|++|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.+.
T Consensus 100 Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 556778888887 89999999999999999999999 8999999887 999999999998 8999999999999999999
Q ss_pred ccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccc
Q 005586 150 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVP 229 (689)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p 229 (689)
|++. .+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|.|+++ .+|-.|..+..|++|-|.+|.|... |
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP-P 250 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP-P 250 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC-h
Confidence 9998 88999999999999999999999 688888865 5899999999999 8999999999999999999999855 4
Q ss_pred hhH
Q 005586 230 SAL 232 (689)
Q Consensus 230 ~~~ 232 (689)
..+
T Consensus 251 AqI 253 (722)
T KOG0532|consen 251 AQI 253 (722)
T ss_pred HHH
Confidence 443
No 452
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.36 E-value=1.1e-12 Score=149.79 Aligned_cols=141 Identities=27% Similarity=0.531 Sum_probs=105.7
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
+.+.|+|++++++ .+|..+. +.|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 4688999999888 4666553 57889999999998 5666554 58899999999988 5676654 478888888
Q ss_pred cccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcc
Q 005586 149 CNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGI 227 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~ 227 (689)
+|+++ .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+|+..
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC
Confidence 88887 6676664 47888888888888 5777654 478888888888884 454432 3577777788877754
No 453
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.36 E-value=3.3e-14 Score=156.80 Aligned_cols=161 Identities=34% Similarity=0.509 Sum_probs=107.5
Q ss_pred ccCcCcCCCCCCCEEEccCCcccccCCccc--------------------------cCCCCCcEEEecccCCCCCCCccc
Q 005586 83 KLSPSLSGLKCLSGLYLHYNSLSGEIPKEI--------------------------RNLTELTDLYLDVNNLSGNIPPEI 136 (689)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~--------------------------~~l~~L~~L~Ls~N~l~g~~p~~~ 136 (689)
.+|+.+..++.|++|+|..|+|. .+|+.+ ...+.|+.|+|.+|.|+...-+.|
T Consensus 301 yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l 379 (1081)
T KOG0618|consen 301 YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVL 379 (1081)
T ss_pred hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhh
Confidence 45666666777777777777765 333221 122336666666777766665566
Q ss_pred cCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcE
Q 005586 137 GSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 216 (689)
Q Consensus 137 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~ 216 (689)
.+...|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|+.+.+++.|++|...+|+|. ..| .+..++.|+.
T Consensus 380 ~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~ 456 (1081)
T KOG0618|consen 380 VNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKV 456 (1081)
T ss_pred ccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceE
Confidence 77777888888888887444445677888888888888887 67788888888888888888887 666 6777888888
Q ss_pred EecccCcCCccc-chhHH-hccCccccccCCCC
Q 005586 217 LDVQNNTLSGIV-PSALK-RLNGGFQFQNNPGL 247 (689)
Q Consensus 217 l~l~~N~l~~~~-p~~~~-~~~~~~~~~~n~~~ 247 (689)
+|++.|+|+... |.... .--.-+.+++|.++
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 888888887443 22222 10113567777753
No 454
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.35 E-value=3.4e-12 Score=145.09 Aligned_cols=52 Identities=31% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchhHHhccCccccccCC
Q 005586 188 GKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNGGFQFQNNP 245 (689)
Q Consensus 188 ~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~n~ 245 (689)
.+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.....+. .+.+.+|.
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~~~L~-~L~Ls~Nq 433 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLPSGLL-SLSVYRNQ 433 (788)
T ss_pred cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcchhhhh-hhhhccCc
Confidence 367788888888884 5543 3578889999999986 455443332 24455553
No 455
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.31 E-value=3.5e-13 Score=141.91 Aligned_cols=159 Identities=26% Similarity=0.343 Sum_probs=110.4
Q ss_pred CCCEEEEEcCCCCcccccCcCcCCCCC---CCEEEccCCcccc----cCCccccCC-CCCcEEEecccCCCCC----CCc
Q 005586 67 HRKVANISLQGKGLTGKLSPSLSGLKC---LSGLYLHYNSLSG----EIPKEIRNL-TELTDLYLDVNNLSGN----IPP 134 (689)
Q Consensus 67 ~~~v~~l~L~~~~l~g~~~~~~~~l~~---L~~L~L~~N~l~g----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 134 (689)
..+++.|+|++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 457888888888887666666655555 8888888888773 344455666 7888888888888743 233
Q ss_pred cccCCccccEEeeecccCCCC----CchhcCCCCCCCEEeccCCcCCCC----CCcccCCCCCCCeeeccCCcCCCCchh
Q 005586 135 EIGSMASLQVLQLCCNQLTGN----IPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFNSLFGTIPE 206 (689)
Q Consensus 135 ~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~ 206 (689)
.+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++....
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 456667788888888888742 334455667888888888887643 334556677888888888888753333
Q ss_pred hhhC-----CCCCcEEecccCcCC
Q 005586 207 SLAN-----NAELLFLDVQNNTLS 225 (689)
Q Consensus 207 ~l~~-----~~~L~~l~l~~N~l~ 225 (689)
.+.. .+.|+.|++++|.++
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCC
Confidence 3322 367888888888876
No 456
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.31 E-value=2e-13 Score=150.77 Aligned_cols=151 Identities=32% Similarity=0.465 Sum_probs=126.9
Q ss_pred CEEEEEcCCCCcccccCcCc-------------------------CCCCCCCEEEccCCcccccCCccccCCCCCcEEEe
Q 005586 69 KVANISLQGKGLTGKLSPSL-------------------------SGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYL 123 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~-------------------------~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 123 (689)
.+..|+|..|+|....+..| ...+.|+.|+|.+|+|+...=+.|.+.++|+.|+|
T Consensus 311 sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhL 390 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHL 390 (1081)
T ss_pred eeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeee
Confidence 48899999998864322111 12355788999999999887778999999999999
Q ss_pred cccCCCCCCCc-cccCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCC
Q 005586 124 DVNNLSGNIPP-EIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFG 202 (689)
Q Consensus 124 s~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 202 (689)
++|+|. .+|+ .+.++..|++|+||+|+|+ .+|..+.++..|++|...+|++. .+| .+..++.|+.+|+|.|+|+.
T Consensus 391 syNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 391 SYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred cccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 999998 5554 5789999999999999999 89999999999999999999999 788 79999999999999999985
Q ss_pred C-chhhhhCCCCCcEEecccCcC
Q 005586 203 T-IPESLANNAELLFLDVQNNTL 224 (689)
Q Consensus 203 ~-~p~~l~~~~~L~~l~l~~N~l 224 (689)
. +|... ..++|++|||++|.=
T Consensus 467 ~~l~~~~-p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 467 VTLPEAL-PSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhhC-CCcccceeeccCCcc
Confidence 4 44333 348999999999973
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.30 E-value=3.1e-12 Score=145.58 Aligned_cols=94 Identities=44% Similarity=0.682 Sum_probs=90.9
Q ss_pred CCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeecc
Q 005586 117 ELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLS 196 (689)
Q Consensus 117 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 196 (689)
.++.|+|++|.|+|.+|..++++++|+.|+|++|+|+|.+|..++++++|+.|+|++|+|+|.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCchhhhhC
Q 005586 197 FNSLFGTIPESLAN 210 (689)
Q Consensus 197 ~N~l~g~~p~~l~~ 210 (689)
+|+++|.+|..+..
T Consensus 499 ~N~l~g~iP~~l~~ 512 (623)
T PLN03150 499 GNSLSGRVPAALGG 512 (623)
T ss_pred CCcccccCChHHhh
Confidence 99999999998865
No 458
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.27 E-value=1.7e-11 Score=116.26 Aligned_cols=132 Identities=17% Similarity=0.078 Sum_probs=97.4
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCccee-EeeEEEcCCCCeEEEEEEcCCC
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR-LRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~-l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
.+.++.|.++.||++... |..|++|....... ....+.+|++.+..+.+.++++ ++.+. . ...++||||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~--~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--P--ETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--C--CCCeEEEEecCC
Confidence 357899999999999876 77899998765431 2235678888888887666554 44332 2 234799999999
Q ss_pred CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 493 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 493 gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
.++... . . ....++.+++++|+.||+.+.....++|+|++|.||+++ ++.+++.|||.+.
T Consensus 76 ~~l~~~----~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 76 SELLTE----D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred Cccccc----c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 877543 0 0 113456789999999998763344579999999999999 6689999999875
No 459
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.27 E-value=1.8e-11 Score=134.59 Aligned_cols=148 Identities=11% Similarity=0.143 Sum_probs=97.7
Q ss_pred hccCCcccccccCCcceEEEEEecC-CcEEEEEEecccCCc---------------------------------h-----
Q 005586 408 TQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCK---------------------------------S----- 448 (689)
Q Consensus 408 t~~f~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~---------------------------------~----- 448 (689)
...|+. +.||+|++|.||+|++++ |+.||||+.+....+ .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999987 999999999754210 0
Q ss_pred -HHHHHHHHHHHHhccC----CCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHh--hhcCCCCCCCCHHHHHHHHHHH
Q 005586 449 -EEAEFVKGLYLLTSLR----HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL--DQEEGSSNVLDWSTRVSIIIGI 521 (689)
Q Consensus 449 -~~~~f~~e~~~l~~l~----H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L--~~~~~~~~~l~~~~~~~ia~~i 521 (689)
.+-+|.+|+..+.+++ +.+.+.+-.++++- ..+.++||||++++.+.++- ...+.....+.......+..|
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q- 275 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ- 275 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-
Confidence 0123555555555553 55555554444332 35678999999999998753 221100011222222222333
Q ss_pred HHHHhhhhCCCCCCCceeecCCCCCceeecCCC----CeEEecccccccccC
Q 005586 522 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF----NPLIADCGLHKLLAD 569 (689)
Q Consensus 522 a~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~----~~kl~DfGla~~~~~ 569 (689)
++..+ ++|+|+||.||+++.++ .+++.|||++..+..
T Consensus 276 ------if~~G-----ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ------VFRDG-----FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HHhCC-----eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33445 99999999999999988 999999999987754
No 460
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.27 E-value=1.8e-11 Score=149.25 Aligned_cols=159 Identities=25% Similarity=0.301 Sum_probs=83.6
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
+++.|+|.++.+. .++..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|..-..+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 4555555555544 3444444555555555554433334442 4445555555555544334445555555555555554
Q ss_pred cccCCCCCchhcCCCC---------------------CCCEEeccCCcCCCCCCccc-----------------------
Q 005586 149 CNQLTGNIPAQIGSLK---------------------SLSVLTLQHNRLNGGIPDSL----------------------- 184 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~---------------------~L~~L~l~~N~l~~~~p~~~----------------------- 184 (689)
+|...+.+|..+ +++ +|+.|+|++|.+. .+|..+
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~ 767 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQ 767 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhcccccc
Confidence 443333344322 233 3444445555543 344321
Q ss_pred -------CCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCcccchh
Q 005586 185 -------GNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSA 231 (689)
Q Consensus 185 -------~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~ 231 (689)
...++|+.|+|++|...+.+|..+.++++|+.|++++|..-+.+|..
T Consensus 768 ~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~ 821 (1153)
T PLN03210 768 PLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG 821 (1153)
T ss_pred ccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC
Confidence 11246777777777777778888888888888888876544455543
No 461
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.27 E-value=8.2e-13 Score=139.07 Aligned_cols=159 Identities=24% Similarity=0.295 Sum_probs=101.9
Q ss_pred CEEEEEcCCCCccc------ccCcCcCCCCCCCEEEccCCcccccCCccccCCCC---CcEEEecccCCCC----CCCcc
Q 005586 69 KVANISLQGKGLTG------KLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTE---LTDLYLDVNNLSG----NIPPE 135 (689)
Q Consensus 69 ~v~~l~L~~~~l~g------~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---L~~L~Ls~N~l~g----~~p~~ 135 (689)
.++.++++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...
T Consensus 52 ~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~ 131 (319)
T cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKG 131 (319)
T ss_pred CceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHH
Confidence 46677777766652 23345666777777777777777666666655555 7777777777763 22334
Q ss_pred ccCC-ccccEEeeecccCCCC----CchhcCCCCCCCEEeccCCcCCCC----CCcccCCCCCCCeeeccCCcCCCC---
Q 005586 136 IGSM-ASLQVLQLCCNQLTGN----IPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFNSLFGT--- 203 (689)
Q Consensus 136 ~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~--- 203 (689)
+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.
T Consensus 132 l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 211 (319)
T cd00116 132 LKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS 211 (319)
T ss_pred HHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH
Confidence 4555 6777777777777742 233455666777777777777642 333445556777777777777643
Q ss_pred -chhhhhCCCCCcEEecccCcCCcc
Q 005586 204 -IPESLANNAELLFLDVQNNTLSGI 227 (689)
Q Consensus 204 -~p~~l~~~~~L~~l~l~~N~l~~~ 227 (689)
++..+..+++|++|++++|.+++.
T Consensus 212 ~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 212 ALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHHHHhcccCCCCEEecCCCcCchH
Confidence 233455567777777777777653
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=6.1e-12 Score=134.77 Aligned_cols=248 Identities=21% Similarity=0.256 Sum_probs=170.7
Q ss_pred cCCccccccc--CCcceEEEEEe--c-CCcEEEEEEecccCC-chHHHHHHHHHHHHhcc-CCCcceeEeeEEEcCCCCe
Q 005586 410 CFSEVNLLGK--GNFSSVYKGTL--R-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 410 ~f~~~~~lg~--G~~g~Vy~~~~--~-~g~~vavK~l~~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 482 (689)
.|.....+|. |.+|.||.+.. + ++..+|+|+-+.... ......=.+|...-.++ .|+|.|+....+ .+++.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~--e~~~~ 192 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW--EGSGI 192 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc--ccCCc
Confidence 3555678999 99999999987 3 688899988433221 11111223445555555 499999977666 44678
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHH----HHhhhhCCCCCCCceeecCCCCCceeecCC-CCeE
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK----GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPL 557 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~----gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~k 557 (689)
.++-+|++ +.+|..+-+.... .++....+.+..+... |+.++|+.. |+|-|+||.||+..++ ...+
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~~---~~p~~~l~~~~~~~~~~~~~al~~~hs~~-----~~~~~~kp~~i~~~~~~~s~~ 263 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPCN---FLPDNLLWNSLRDWLSRDVTALSHLHSNN-----IVHDDLKPANIFTTSDWTSCK 263 (524)
T ss_pred ceeeeccc-cchhHHhhhcccc---cCCchhhhhHHhhhhhcccccccccCCCc-----ccccccchhheecccccceee
Confidence 88888988 5788888776433 2444555566666666 999999877 9999999999999999 8899
Q ss_pred EecccccccccCCceee----eecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhH
Q 005586 558 IADCGLHKLLADDIVFS----VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 633 (689)
Q Consensus 558 l~DfGla~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~ 633 (689)
+.|||+...+.+..... .....+...|++||.. .+.++.+.|+|++|.+.+|..++..+.... ....| .+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g-~~~~W----~~ 337 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVG-KNSSW----SQ 337 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCC-CCCCc----cc
Confidence 99999998876654211 1222455669999976 457899999999999999999986654221 00111 11
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 005586 634 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 674 (689)
Q Consensus 634 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~ 674 (689)
+-...+..++...-..++......+++.+|..|++.+.+..
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111222233333445666888999999999999888764
No 463
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.26 E-value=3e-11 Score=147.34 Aligned_cols=127 Identities=22% Similarity=0.247 Sum_probs=97.6
Q ss_pred CCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEee
Q 005586 68 RKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQL 147 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 147 (689)
.+++.|++.++.+. .+|..| .+.+|+.|+|++|+|. .+|..+..+++|+.|+|++|..-+.+| .++.+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEe
Confidence 35788888887775 667666 5688899999998887 677788888999999998876555777 4788889999999
Q ss_pred ecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCc
Q 005586 148 CCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNS 199 (689)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 199 (689)
++|.....+|..++++++|+.|++++|..-+.+|..+ ++++|+.|++++|.
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCS 715 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCC
Confidence 8887777888888889999999998865545677654 56666666665553
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.6e-11 Score=131.58 Aligned_cols=248 Identities=20% Similarity=0.220 Sum_probs=173.0
Q ss_pred HhccCCcccccccCCcceEEEEEec--CCcEEEEEEecccCCchHHHHH-HHHHHHHhcc-CCCcceeEeeEEEcCCCCe
Q 005586 407 ATQCFSEVNLLGKGNFSSVYKGTLR--DGTLVAIRSINVTSCKSEEAEF-VKGLYLLTSL-RHENIIRLRGFCCSRGRGE 482 (689)
Q Consensus 407 at~~f~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~~~~~~~f-~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 482 (689)
-+.+|.....||.|.|+.|++...+ ++..|++|.+.........+.| ..|+.+...+ -|.+++....-+.. .+.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~--~r~ 340 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ--LRQ 340 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--ccc
Confidence 4457888999999999999998754 6889999988766543333222 4555555555 48888876544422 245
Q ss_pred EEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCC-CCeEEecc
Q 005586 483 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPLIADC 561 (689)
Q Consensus 483 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~-~~~kl~Df 561 (689)
.++=-||++++++...+.. ...++...++++..+++.++.++|+.. ++|+|+||+||++..+ +.-+++||
T Consensus 341 ~~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~~-----~~~~d~~psni~i~~~~~~~~~~~~ 411 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSKL-----FVHLDVKPSNILISNDGFFSKLGDF 411 (524)
T ss_pred ccCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccchh-----hhcccccccceeeccchhhhhcccc
Confidence 6688899999988877632 234777888999999999999999887 9999999999999986 88899999
Q ss_pred cccccccCCceeeeecCCCCCCCC--CccccccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhcccc
Q 005586 562 GLHKLLADDIVFSVLKTSAAMGYL--APEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 639 (689)
Q Consensus 562 Gla~~~~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 639 (689)
|.+..+.-.. .. ....-+++ +++......+..+.|+||||.-+.|.++|..-......+.. +....
T Consensus 412 ~~~t~~~~~~---~~-~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~--------i~~~~ 479 (524)
T KOG0601|consen 412 GCWTRLAFSS---GV-FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT--------IRSGD 479 (524)
T ss_pred ccccccceec---cc-ccccccccccchhhccccccccccccccccccccccccCcccCccccccee--------eeccc
Confidence 9987532211 11 11222344 45545556778999999999999999998754332211110 00111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHh
Q 005586 640 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 678 (689)
Q Consensus 640 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~evl~~L~~ 678 (689)
....+. ...++..++..+..+++..||.+.++..+...
T Consensus 480 ~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 480 TPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111122 22667778888899999999999988776544
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=2.7e-12 Score=124.78 Aligned_cols=136 Identities=25% Similarity=0.301 Sum_probs=110.4
Q ss_pred cCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCC
Q 005586 88 LSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLS 167 (689)
Q Consensus 88 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 167 (689)
+.....|++||||+|.|+ .+..+..-+++++.|+||+|++. .+- .+..|++|+.||||+|.++ .+-.+-..|.+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334567999999999998 77788888899999999999998 343 3888999999999999998 5555556788899
Q ss_pred EEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCc-hhhhhCCCCCcEEecccCcCCcccc
Q 005586 168 VLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI-PESLANNAELLFLDVQNNTLSGIVP 229 (689)
Q Consensus 168 ~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~~~~L~~l~l~~N~l~~~~p 229 (689)
.|.|+.|.+.. + +.++.|-+|..||+++|++...- -..++++|.|+.|.|.+|.|++.+.
T Consensus 356 tL~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 356 TLKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eeehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 99999998862 2 34677788999999999987321 2467889999999999999998765
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=2.8e-11 Score=113.50 Aligned_cols=126 Identities=25% Similarity=0.300 Sum_probs=43.0
Q ss_pred cCCCCCCCEEEccCCcccccCCcccc-CCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhc-CCCCC
Q 005586 88 LSGLKCLSGLYLHYNSLSGEIPKEIR-NLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQI-GSLKS 165 (689)
Q Consensus 88 ~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~ 165 (689)
+.+...+++|+|++|.|+. + +.++ .|.+|+.|||++|.++ .++ .+..+++|+.|+|++|+++. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3445567888888888873 3 2354 5778888888888887 343 46677888888888888874 43333 35788
Q ss_pred CCEEeccCCcCCCCC-CcccCCCCCCCeeeccCCcCCCCc---hhhhhCCCCCcEEe
Q 005586 166 LSVLTLQHNRLNGGI-PDSLGNLGKLKRLDLSFNSLFGTI---PESLANNAELLFLD 218 (689)
Q Consensus 166 L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~---p~~l~~~~~L~~l~ 218 (689)
|+.|+|++|++...- -..+..+++|+.|+|.+|.++... ...+..+|+|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 888888888876321 134566777777777777776331 12345567777766
No 467
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.14 E-value=2.1e-11 Score=132.44 Aligned_cols=156 Identities=33% Similarity=0.532 Sum_probs=117.8
Q ss_pred CCEEEEEcCCCCcccccCcCcCCCC-CCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEe
Q 005586 68 RKVANISLQGKGLTGKLSPSLSGLK-CLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQ 146 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 146 (689)
..++.+++.+|.++ .+++....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 46888899888887 6777777774 8999999999988 67777888999999999999998 7777777888899999
Q ss_pred eecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCc
Q 005586 147 LCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSG 226 (689)
Q Consensus 147 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~ 226 (689)
+++|+++ .+|..+..+..|+.|.+++|++. .++..+.++.++..|.+++|++. .++..+..+++++.|++++|.++.
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~ 269 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS 269 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccc
Confidence 9999988 67776666666888888888544 45556666666666666666665 335556666667777777776665
Q ss_pred ccc
Q 005586 227 IVP 229 (689)
Q Consensus 227 ~~p 229 (689)
..+
T Consensus 270 i~~ 272 (394)
T COG4886 270 ISS 272 (394)
T ss_pred ccc
Confidence 443
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=4.3e-10 Score=111.63 Aligned_cols=148 Identities=19% Similarity=0.238 Sum_probs=111.6
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCC--CcceeEeeEEEcCC-CCeEEEEEEcC
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH--ENIIRLRGFCCSRG-RGECFLIYDFA 490 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~-~~~~~lV~e~~ 490 (689)
.+.|+.|..+.||++...+|..+++|............++..|.+++..+++ .++.+++.+..... .+..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 3578999999999999877789999997654322234578899999999876 44566777663321 12468999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCC-------------------------------------
Q 005586 491 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV------------------------------------- 533 (689)
Q Consensus 491 ~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~------------------------------------- 533 (689)
++.++.+.+.. ..++...+..++.+++++|++||+...
T Consensus 83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99888776532 136777888899999999999996321
Q ss_pred --------------CCCceeecCCCCCceeecC--CCCeEEeccccccc
Q 005586 534 --------------NKPAIVHRNLSVEKVLIDQ--QFNPLIADCGLHKL 566 (689)
Q Consensus 534 --------------~~~~ivH~dlk~~NiLl~~--~~~~kl~DfGla~~ 566 (689)
....++|+|+.+.||++++ +..+.|.||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1355799999999999998 66689999997753
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.12 E-value=8.8e-10 Score=119.35 Aligned_cols=167 Identities=17% Similarity=0.199 Sum_probs=120.9
Q ss_pred cCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCC
Q 005586 431 RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLD 510 (689)
Q Consensus 431 ~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~ 510 (689)
.++.+|.|...+.... .......+.++.|+.+|||||++++.-+.. .+..|+|+|-+. -|..++... .
T Consensus 35 ~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~--Pl~~~lk~l-------~ 102 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVR--PLETVLKEL-------G 102 (690)
T ss_pred ccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccc--cHHHHHHHh-------H
Confidence 3688888888876543 334456777889999999999999987743 468899999884 466666542 2
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceeeeecCCCCCCCCCcccc
Q 005586 511 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 590 (689)
Q Consensus 511 ~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~ 590 (689)
-....-.+.||+.||.|||..+. ++|++|.-..|++++.|+.||++|-++........ ......--..|..|+.+
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~~----lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDCN----LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC----eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhc
Confidence 34555678999999999997654 99999999999999999999999988764432211 00000011236777754
Q ss_pred ccCCCCCcccchhHHHHHHHHHhCCC
Q 005586 591 TTGRFTERSDIFAFGVIILQILTGSL 616 (689)
Q Consensus 591 ~~~~~~~ksDV~sfGvvl~elltG~~ 616 (689)
.... -..|.|-||++++|++.|..
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCccc
Confidence 3222 34699999999999999943
No 470
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.10 E-value=5.1e-11 Score=129.36 Aligned_cols=149 Identities=30% Similarity=0.480 Sum_probs=102.8
Q ss_pred EEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCC-CCcEEEecccCCCCCCCccccCCccccEEeeecc
Q 005586 72 NISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLT-ELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCN 150 (689)
Q Consensus 72 ~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 150 (689)
.+++..+.+...+ ..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 3556665553222 23344567777777777777 5666666664 7777788887777 66667777777888888888
Q ss_pred cCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEecccCcCCc
Q 005586 151 QLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSG 226 (689)
Q Consensus 151 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~ 226 (689)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|++++|++. .++..+..+.++..+.+.+|++..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee
Confidence 777 56665557777777778887777 67766666666777777777544 455566777777777777777654
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=2.2e-09 Score=102.73 Aligned_cols=137 Identities=15% Similarity=0.090 Sum_probs=97.5
Q ss_pred cccccCCcceEEEEEecC-------CcEEEEEEecccCC---------------------chHHHHHH----HHHHHHhc
Q 005586 415 NLLGKGNFSSVYKGTLRD-------GTLVAIRSINVTSC---------------------KSEEAEFV----KGLYLLTS 462 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~---------------------~~~~~~f~----~e~~~l~~ 462 (689)
..||.|.-+.||.|.-.+ +..+|||+.+.... ....+.+. +|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999998553 47999998863211 01122333 78999998
Q ss_pred cCC--CcceeEeeEEEcCCCCeEEEEEEcCCCCCHHH-HhhhcCCCCCCCCHHHHHHHHHHHHHHHhhh-hCCCCCCCce
Q 005586 463 LRH--ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSK-YLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL-HSSEVNKPAI 538 (689)
Q Consensus 463 l~H--~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~-~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~~~i 538 (689)
+.- -++..++++ ..-++||||+.++.+.. .|.+. .++..+...+..+++.+|.+| |..+ |
T Consensus 83 l~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~~g-----l 146 (197)
T cd05146 83 MQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKECN-----L 146 (197)
T ss_pred HHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHhCC-----e
Confidence 853 456666654 23579999997654421 22221 244455667889999999999 7776 9
Q ss_pred eecCCCCCceeecCCCCeEEeccccccccc
Q 005586 539 VHRNLSVEKVLIDQQFNPLIADCGLHKLLA 568 (689)
Q Consensus 539 vH~dlk~~NiLl~~~~~~kl~DfGla~~~~ 568 (689)
|||||++.||++++ +.+.|+|||.+....
T Consensus 147 VHGDLs~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 147 VHADLSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred ecCCCCHHHEEEEC-CcEEEEECCCceeCC
Confidence 99999999999974 679999999876543
No 472
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.00 E-value=3.2e-11 Score=121.74 Aligned_cols=169 Identities=25% Similarity=0.341 Sum_probs=89.4
Q ss_pred ceEEcCCCCCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCC
Q 005586 60 EGIACNEHRKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSM 139 (689)
Q Consensus 60 ~gv~C~~~~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 139 (689)
.+-+|+... -..++-.+.+|+ .+|..+- ..-+.|+|..|+|+...|..|+.+++|+.||||+|+|+-.-|.+|..+
T Consensus 39 ~pC~Cs~~~-g~~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL 114 (498)
T KOG4237|consen 39 APCTCSDVE-GGIVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGL 114 (498)
T ss_pred CCcccCCCC-CceEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhh
Confidence 344565433 345566666666 4444331 233456666666665555556666666666666666665555555555
Q ss_pred ccccEEeeec-ccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCchhhhhCCCCCcEEe
Q 005586 140 ASLQVLQLCC-NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 218 (689)
Q Consensus 140 ~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~~~~L~~l~ 218 (689)
.+|..|-+.+ |+|+...-..|++|.+|+.| .+.-|++.-...+.|..+++|..|.
T Consensus 115 ~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL------------------------llNan~i~Cir~~al~dL~~l~lLs 170 (498)
T KOG4237|consen 115 ASLLSLVLYGNNKITDLPKGAFGGLSSLQRL------------------------LLNANHINCIRQDALRDLPSLSLLS 170 (498)
T ss_pred HhhhHHHhhcCCchhhhhhhHhhhHHHHHHH------------------------hcChhhhcchhHHHHHHhhhcchhc
Confidence 5555444433 55553333344444444444 4444444444444455555555555
Q ss_pred cccCcCCcccchhHHhccC--ccccccCCCCCCCCCCCCc
Q 005586 219 VQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLR 256 (689)
Q Consensus 219 l~~N~l~~~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~ 256 (689)
+-+|.+..+.-..|..+.. .+.+.-||+.|.|.++++.
T Consensus 171 lyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla 210 (498)
T KOG4237|consen 171 LYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLA 210 (498)
T ss_pred ccchhhhhhccccccchhccchHhhhcCccccccccchhh
Confidence 5555554333333333322 3556778888998776543
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.98 E-value=5.2e-11 Score=115.96 Aligned_cols=130 Identities=25% Similarity=0.300 Sum_probs=108.7
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeee
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLC 148 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 148 (689)
.++.+||++|.++ .+..+..-++.++.|++|+|+|. .+- .+..|++|+.||||+|.++ .+-..=.+|-+.+.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4688999999998 77888888999999999999998 333 3889999999999999998 555555678899999999
Q ss_pred cccCCCCCchhcCCCCCCCEEeccCCcCCCC-CCcccCCCCCCCeeeccCCcCCCCc
Q 005586 149 CNQLTGNIPAQIGSLKSLSVLTLQHNRLNGG-IPDSLGNLGKLKRLDLSFNSLFGTI 204 (689)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~ 204 (689)
.|.+.. -..+..|-+|..||+++|++... --..+|+|+-|++|.|.+|.+.+.+
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999863 24578889999999999999732 1246899999999999999999553
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=3.9e-10 Score=105.80 Aligned_cols=111 Identities=32% Similarity=0.439 Sum_probs=44.2
Q ss_pred ccCCCCCcEEEecccCCCCCCCcccc-CCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCccc-CCCCC
Q 005586 112 IRNLTELTDLYLDVNNLSGNIPPEIG-SMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSL-GNLGK 189 (689)
Q Consensus 112 ~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~ 189 (689)
+.+..++++|+|++|.|+ .| +.++ .+.+|+.|+|++|+++. ++ .+..++.|+.|+|++|+++ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 456668999999999998 44 3566 58899999999999984 43 5888999999999999999 565555 46899
Q ss_pred CCeeeccCCcCCCCc-hhhhhCCCCCcEEecccCcCCcc
Q 005586 190 LKRLDLSFNSLFGTI-PESLANNAELLFLDVQNNTLSGI 227 (689)
Q Consensus 190 L~~L~ls~N~l~g~~-p~~l~~~~~L~~l~l~~N~l~~~ 227 (689)
|+.|+|++|++...- -..+..+++|+.|+|.+|+++..
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch
Confidence 999999999997431 24677899999999999998744
No 475
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.95 E-value=9.2e-09 Score=95.00 Aligned_cols=132 Identities=14% Similarity=0.256 Sum_probs=94.1
Q ss_pred cccccCCcceEEEEEecCCcEEEEEE-ecccCCch------HHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEEEE
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKS------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 487 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~~~~~------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 487 (689)
..+++|+-..+|.+.+.+. .+++|. +.+.-... ....-.+|.+++.+++--.|-.-+=|.++ .+...++|
T Consensus 2 ~~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCCCEEEE
Confidence 3688999999999987543 455554 33222111 12355678889888863333222223322 45678999
Q ss_pred EcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccccc
Q 005586 488 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 566 (689)
Q Consensus 488 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~ 566 (689)
||+++-.|.+.+... +..++..|-+-+.-||..+ |+|+||.++||.+..+. +.+.||||+..
T Consensus 79 e~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~g-----ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 79 EYIEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAG-----IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcC-----eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999998888653 2456777888888999988 99999999999998875 99999999874
No 476
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.94 E-value=1.2e-08 Score=93.74 Aligned_cols=143 Identities=20% Similarity=0.277 Sum_probs=99.9
Q ss_pred cccccccCCcceEEEEEecCCcEEEEEE-ecccCC------chHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 413 EVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSC------KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~~~------~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
...+|-+|+-+.|+++.+. |+...||. +.+.-. +-..+.-.+|++.|.+++--.|.--.-|+++... -.+
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~--~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG--GQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC--CeE
Confidence 3568999999999999987 66655554 332221 1123567789999998864444443334444433 358
Q ss_pred EEEcCCC-CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC---eEEecc
Q 005586 486 IYDFAPK-GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---PLIADC 561 (689)
Q Consensus 486 V~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~---~kl~Df 561 (689)
+|||+++ .++.+++...... +..+ ......+..|-+-+.-||..+ |+|+||.++||+|..++. +-+.||
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~-~~~d-~~~~~~~~~iG~~igklH~nd-----iiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMED-ESED-EGLAELARRIGELIGKLHDND-----IIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred EEEeccchhHHHHHHHHHccC-cccc-hhHHHHHHHHHHHHHHhhhCC-----eecccccccceEEecCCCcCceEEEee
Confidence 9999976 4888888764321 1112 222678888999999999988 999999999999976554 479999
Q ss_pred cccc
Q 005586 562 GLHK 565 (689)
Q Consensus 562 Gla~ 565 (689)
|++.
T Consensus 161 gls~ 164 (229)
T KOG3087|consen 161 GLSS 164 (229)
T ss_pred cchh
Confidence 9975
No 477
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.89 E-value=2.3e-08 Score=105.11 Aligned_cols=170 Identities=20% Similarity=0.318 Sum_probs=125.9
Q ss_pred ceEEEEEec-CCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcceeEeeEEE--cCCCCeEEEEEEcCCC-CCHHHH
Q 005586 423 SSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC--SRGRGECFLIYDFAPK-GKLSKY 498 (689)
Q Consensus 423 g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~--~~~~~~~~lV~e~~~~-gsL~~~ 498 (689)
.+.||+... ||..|++||++..+.. .......-++..+++.|+|+|++..++. .-+....++||+|.|+ ++|.+.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeecccccc-CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 578999865 8999999999544321 1112334567889999999999988764 1233568899999997 577665
Q ss_pred hhhcCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccc
Q 005586 499 LDQEEG-----------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 567 (689)
Q Consensus 499 L~~~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~ 567 (689)
-..... .+...++...|.++.|++.||.++|+.| +.-+-|.+++|+++.+.+++|+.+|..-.+
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-----LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-----LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-----ceeecccHhHeEeeCcceEEEecccceeee
Confidence 432211 1234678889999999999999999988 788999999999999999999999987655
Q ss_pred cCCceeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCCC
Q 005586 568 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 616 (689)
Q Consensus 568 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~~ 616 (689)
..+.. |-+.+ -.+-|.=.||.+++-|.||..
T Consensus 444 ~~d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT---------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC---------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 44320 11111 246788899999999999954
No 478
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=1.2e-09 Score=84.29 Aligned_cols=60 Identities=33% Similarity=0.426 Sum_probs=35.0
Q ss_pred CCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccC
Q 005586 93 CLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQL 152 (689)
Q Consensus 93 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 152 (689)
+|++|+|++|+|+...+..|.++++|++|+|++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666644445556666666666666666544445555566666666655543
No 479
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=2.3e-09 Score=82.66 Aligned_cols=61 Identities=31% Similarity=0.433 Sum_probs=34.9
Q ss_pred CCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcC
Q 005586 116 TELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRL 176 (689)
Q Consensus 116 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 176 (689)
++|++|+|++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3456666666666644344555566666666666666555555555566666666655543
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.82 E-value=1.2e-09 Score=123.06 Aligned_cols=247 Identities=19% Similarity=0.199 Sum_probs=159.0
Q ss_pred ccCCcccccccCCcceEEEEEec-CCcEEEEEEecccC--CchHHHHHHHHHHHHhccCCCcceeEeeEEEcCCCCeEEE
Q 005586 409 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 485 (689)
Q Consensus 409 ~~f~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 485 (689)
+.|...+-+.+|.++.++.+.-. .|...++|...... .+...+....+-.++-..+||-++...--+ ......++
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~--~~rsP~~L 881 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF--PCRSPLPL 881 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC--CCCCCcch
Confidence 34555677889999999887643 34334444332211 011111122222222223445555432211 23467889
Q ss_pred EEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccc
Q 005586 486 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 486 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
|++|..+++|..-||.... .+..-.......+..+++|||... +.|||++|.|.+...++..+++|||...
T Consensus 882 ~~~~~~~~~~~Skl~~~~~----~saepaRs~i~~~vqs~e~L~s~~-----r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC----LSAEPARSPILERVQSLESLHSSL-----RKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred hhHHhccCCchhhhhcCCC----cccccccchhHHHHhhhhccccch-----hhcccccccchhhcccCCcccCcccccc
Confidence 9999999999999987653 222222334455677899999865 7999999999999999999999998433
Q ss_pred cccC------C---------------c---------eeeeecCCCCCCCCCccccccCCCCCcccchhHHHHHHHHHhCC
Q 005586 566 LLAD------D---------------I---------VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 615 (689)
Q Consensus 566 ~~~~------~---------------~---------~~~~~~~~~~~~y~aPE~~~~~~~~~ksDV~sfGvvl~elltG~ 615 (689)
.... . . ........+|..|.+||...+......+|+|+.|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 2110 0 0 00112245678899999999999999999999999999999999
Q ss_pred CCcchhHHHHHhhhhhhHhhccccC-CCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 005586 616 LVLTSSMRLAAESATFENFIDRNLK-GKFSESEAAKLGKMALVCTHEDPENRPTME 670 (689)
Q Consensus 616 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~ 670 (689)
.|+....... .++.++..... ...+.+...+...+...-+..+|.+|-.|.
T Consensus 1033 pp~na~tpq~----~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQQ----IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchhh----hhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9997654322 23333333222 233455566677777777788888886665
No 481
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.82 E-value=8.1e-08 Score=97.30 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=100.5
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCc----------hHHHHHHHHHHHHhccCCC--cceeEeeEEEcCC---
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK----------SEEAEFVKGLYLLTSLRHE--NIIRLRGFCCSRG--- 479 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----------~~~~~f~~e~~~l~~l~H~--niv~l~g~~~~~~--- 479 (689)
+.+-+-....|++..+ +|+.|.||+.....-. .....+.+|.+.+.++... ...++++|.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455445556777766 5788999987433211 1112477888888887432 3334455543221
Q ss_pred CCeEEEEEEcCCCC-CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecC------
Q 005586 480 RGECFLIYDFAPKG-KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ------ 552 (689)
Q Consensus 480 ~~~~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~------ 552 (689)
....++|+|++++. +|.+++..... ...+...+..++.+++..+.-||..| |+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~G-----i~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAAG-----INHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHCc-----CccCCCChhhEEEeccccCCC
Confidence 23578999999886 89999854221 22455677789999999999999998 999999999999985
Q ss_pred -CCCeEEeccccccc
Q 005586 553 -QFNPLIADCGLHKL 566 (689)
Q Consensus 553 -~~~~kl~DfGla~~ 566 (689)
++.+.++||+.++.
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 46789999998753
No 482
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.75 E-value=5.7e-08 Score=92.76 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=81.3
Q ss_pred eEEEEEecCCcEEEEEEecccCC-------------------------chHHHHHHHHHHHHhccCCC--cceeEeeEEE
Q 005586 424 SVYKGTLRDGTLVAIRSINVTSC-------------------------KSEEAEFVKGLYLLTSLRHE--NIIRLRGFCC 476 (689)
Q Consensus 424 ~Vy~~~~~~g~~vavK~l~~~~~-------------------------~~~~~~f~~e~~~l~~l~H~--niv~l~g~~~ 476 (689)
.||.|...+|..+|+|..+.... ........+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999999999999999864210 00123567899999999765 456666543
Q ss_pred cCCCCeEEEEEEcCC--CCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhh-hhCCCCCCCceeecCCCCCceeecCC
Q 005586 477 SRGRGECFLIYDFAP--KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY-LHSSEVNKPAIVHRNLSVEKVLIDQQ 553 (689)
Q Consensus 477 ~~~~~~~~lV~e~~~--~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~y-LH~~~~~~~~ivH~dlk~~NiLl~~~ 553 (689)
.-++||||++ +..+..+.... ++......+..+++..+.. +|..+ |+|+|+.+.||+++++
T Consensus 80 -----~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~g-----ivHGDLs~~NIlv~~~ 143 (188)
T PF01163_consen 80 -----RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKAG-----IVHGDLSEYNILVDDG 143 (188)
T ss_dssp -----TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCTT-----EEESS-STTSEEEETT
T ss_pred -----CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhcC-----ceecCCChhhEEeecc
Confidence 2369999998 44444332221 1123345677777776666 46777 9999999999999988
Q ss_pred CCeEEecccccccc
Q 005586 554 FNPLIADCGLHKLL 567 (689)
Q Consensus 554 ~~~kl~DfGla~~~ 567 (689)
.+.|+|||.+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 9999999987644
No 483
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.66 E-value=1.1e-09 Score=95.12 Aligned_cols=82 Identities=28% Similarity=0.440 Sum_probs=45.5
Q ss_pred CCcEEEecccCCCCCCCccccC-CccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeec
Q 005586 117 ELTDLYLDVNNLSGNIPPEIGS-MASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDL 195 (689)
Q Consensus 117 ~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 195 (689)
.|+..+|++|.|. .+|+.|.. .+.++.|+|++|+++ .+|.+++.++.|+.|+++.|.|. ..|..+..|.+|-.|+.
T Consensus 54 el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 54 ELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred eEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 3444456666655 34444432 335556666666665 55555666666666666666665 45555555556666666
Q ss_pred cCCcCC
Q 005586 196 SFNSLF 201 (689)
Q Consensus 196 s~N~l~ 201 (689)
.+|.+.
T Consensus 131 ~~na~~ 136 (177)
T KOG4579|consen 131 PENARA 136 (177)
T ss_pred CCCccc
Confidence 666555
No 484
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=3.8e-09 Score=108.40 Aligned_cols=156 Identities=25% Similarity=0.203 Sum_probs=75.4
Q ss_pred CEEEEEcCCCCcccccC--cCcCCCCCCCEEEccCCcccccCC--ccccCCCCCcEEEecccCCCCCCCccc-cCCcccc
Q 005586 69 KVANISLQGKGLTGKLS--PSLSGLKCLSGLYLHYNSLSGEIP--KEIRNLTELTDLYLDVNNLSGNIPPEI-GSMASLQ 143 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~--~~~~~l~~L~~L~L~~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~ 143 (689)
.++.+.|.+.... ..+ .....|++++.||||.|-|....| .-...|++|+.|+|+.|+|.-..-... ..++.|+
T Consensus 122 kL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 4455555544432 111 234456667777777776664433 234566777777777777653332221 2345566
Q ss_pred EEeeecccCCC-CCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCc-hhhhhCCCCCcEEeccc
Q 005586 144 VLQLCCNQLTG-NIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI-PESLANNAELLFLDVQN 221 (689)
Q Consensus 144 ~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~~~~L~~l~l~~ 221 (689)
.|.|+.+.|+- .+-..+..+++|+.|+|..|...+.--.....+..|+.|||++|++-... -...+.++.|..|++++
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~ 280 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSS 280 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccc
Confidence 66666665551 11112334455555555555322222223333445555555555554221 02234445555555555
Q ss_pred CcCC
Q 005586 222 NTLS 225 (689)
Q Consensus 222 N~l~ 225 (689)
+.++
T Consensus 281 tgi~ 284 (505)
T KOG3207|consen 281 TGIA 284 (505)
T ss_pred cCcc
Confidence 5444
No 485
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.62 E-value=4.3e-08 Score=69.30 Aligned_cols=39 Identities=41% Similarity=0.899 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHccC-CCCCccCCCCCC--CCCCCCCcceEEcC
Q 005586 25 NTELRALLDLKASLD-PENKLLQSWTEN--GDPCSGSFEGIACN 65 (689)
Q Consensus 25 ~~~~~all~~k~~~~-~~~~~~~~W~~~--~~~C~~~w~gv~C~ 65 (689)
++|++||++||+++. ++...+.+|+.+ .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 679999999999997 455678999986 7899 69999995
No 486
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.60 E-value=1.1e-08 Score=111.48 Aligned_cols=154 Identities=21% Similarity=0.295 Sum_probs=104.4
Q ss_pred HHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccCCceeeeec--------CCCCCCCCCcccc
Q 005586 519 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK--------TSAAMGYLAPEYV 590 (689)
Q Consensus 519 ~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~--------~~~~~~y~aPE~~ 590 (689)
.+++.||.|+|.. +.+||++|.|++|.+++.+..||+.|+.+........+.... ......|.|||++
T Consensus 106 ~~v~dgl~flh~s----Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 106 GNVADGLAFLHRS----AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hcccchhhhhccC----cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455999999963 569999999999999999999999999876544322111110 1122459999999
Q ss_pred ccCCCCCcccchhHHHHHHHHHhCCCCcchhHHHHHhhhhhhHhhccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 005586 591 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTME 670 (689)
Q Consensus 591 ~~~~~~~ksDV~sfGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dp~~RPs~~ 670 (689)
.....+.++|+||+||++|-+..|+.+.-....... ...+....+..-...+....+.++.+-+.+.+..++.-||++.
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~ 260 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-SYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLD 260 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCCcc-hhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchh
Confidence 998889999999999999999955444321111000 0111111111112233445567888888899999999999988
Q ss_pred HHHHHHH
Q 005586 671 AVIEELT 677 (689)
Q Consensus 671 evl~~L~ 677 (689)
++.....
T Consensus 261 ~l~~~~f 267 (700)
T KOG2137|consen 261 LLLSIPF 267 (700)
T ss_pred hhhcccc
Confidence 8865443
No 487
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.54 E-value=1.6e-09 Score=94.02 Aligned_cols=137 Identities=24% Similarity=0.298 Sum_probs=97.0
Q ss_pred cCCCCCEEEEEcCCCCcccccCcC---cCCCCCCCEEEccCCcccccCCcccc-CCCCCcEEEecccCCCCCCCccccCC
Q 005586 64 CNEHRKVANISLQGKGLTGKLSPS---LSGLKCLSGLYLHYNSLSGEIPKEIR-NLTELTDLYLDVNNLSGNIPPEIGSM 139 (689)
Q Consensus 64 C~~~~~v~~l~L~~~~l~g~~~~~---~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l 139 (689)
|++......++|+++.|- .++.. +.....|+..+|++|.|. .+|+.|. ..+.++.|+|++|.|+ .+|.++..+
T Consensus 23 cedakE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam 99 (177)
T KOG4579|consen 23 CEDAKELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAM 99 (177)
T ss_pred hHHHHHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhh
Confidence 555555666777777764 45554 344556667799999998 5555554 4468899999999998 889999999
Q ss_pred ccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCch
Q 005586 140 ASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP 205 (689)
Q Consensus 140 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p 205 (689)
+.|+.|+++.|.|. ..|..+..|.+|-.|+..+|.+. .||-.+-.-..+-..++.+|.+.+.-+
T Consensus 100 ~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 100 PALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred HHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 99999999999998 67777777999999999999887 666553222222233445555554444
No 488
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.48 E-value=1e-08 Score=111.13 Aligned_cols=126 Identities=26% Similarity=0.293 Sum_probs=78.3
Q ss_pred CCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcc-cCCCCCCCeeec
Q 005586 117 ELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDS-LGNLGKLKRLDL 195 (689)
Q Consensus 117 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l 195 (689)
.|...+.++|+|. ....++.-++.|+.|||++|+++..- .+..|+.|++|||++|.|. .+|.. ...+ .|+.|++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 4666677777776 56666666777777777777776442 6677777777777777777 45542 2223 3777777
Q ss_pred cCCcCCCCchhhhhCCCCCcEEecccCcCCcccchh-HHhccC--ccccccCCCCCC
Q 005586 196 SFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSA-LKRLNG--GFQFQNNPGLCG 249 (689)
Q Consensus 196 s~N~l~g~~p~~l~~~~~L~~l~l~~N~l~~~~p~~-~~~~~~--~~~~~~n~~~c~ 249 (689)
++|.++.. ..+.++.+|+.|||+.|-|++----. +..+.. .+.+.|||-.|.
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 77777632 24566777777777777776543211 111111 345677776665
No 489
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.47 E-value=1.2e-06 Score=85.91 Aligned_cols=107 Identities=23% Similarity=0.249 Sum_probs=81.3
Q ss_pred HHHHHHHHHHhccC--CCcceeEeeEEEcCCC--CeEEEEEEcCCCC-CHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 005586 451 AEFVKGLYLLTSLR--HENIIRLRGFCCSRGR--GECFLIYDFAPKG-KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 525 (689)
Q Consensus 451 ~~f~~e~~~l~~l~--H~niv~l~g~~~~~~~--~~~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL 525 (689)
..+.+|...+.++. .-...+.+++...... ...++|+|++++. +|.+++..... .+...+..++.++++.+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLI 131 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHH
Confidence 45677777777764 3334455555543221 3458999999984 89999876332 45566788999999999
Q ss_pred hhhhCCCCCCCceeecCCCCCceeecCCC---CeEEeccccccc
Q 005586 526 GYLHSSEVNKPAIVHRNLSVEKVLIDQQF---NPLIADCGLHKL 566 (689)
Q Consensus 526 ~yLH~~~~~~~~ivH~dlk~~NiLl~~~~---~~kl~DfGla~~ 566 (689)
+-||..+ |+|+|+++.|||++.+. .+.++||+-++.
T Consensus 132 ~~lH~~g-----i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHDAG-----IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHCc-----CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999998 99999999999999887 789999997664
No 490
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=4e-08 Score=101.09 Aligned_cols=157 Identities=24% Similarity=0.272 Sum_probs=118.5
Q ss_pred CCEEEEEcCCCCcccccC--cCcCCCCCCCEEEccCCcccccCCcc-ccCCCCCcEEEecccCCCCC-CCccccCCcccc
Q 005586 68 RKVANISLQGKGLTGKLS--PSLSGLKCLSGLYLHYNSLSGEIPKE-IRNLTELTDLYLDVNNLSGN-IPPEIGSMASLQ 143 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~--~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~ 143 (689)
.+|+.|||+.|-+...-+ .-...|++|+.|+|+.|+|.-..... -..++.|+.|.|+.+.|+-. +-..+..+|+|.
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 479999999998775433 23567999999999999987433322 23678999999999999821 122345679999
Q ss_pred EEeeecccCCCCCchhcCCCCCCCEEeccCCcCCCCCC--cccCCCCCCCeeeccCCcCCCC-chhh-----hhCCCCCc
Q 005586 144 VLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIP--DSLGNLGKLKRLDLSFNSLFGT-IPES-----LANNAELL 215 (689)
Q Consensus 144 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~L~ls~N~l~g~-~p~~-----l~~~~~L~ 215 (689)
.|+|..|...+.-......+..|+.|||++|++- ..+ ...+.++.|+.|+++.+.+... .|+. ...+++|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 9999999644444445566788999999999987 455 4578899999999999988743 3332 45678999
Q ss_pred EEecccCcCC
Q 005586 216 FLDVQNNTLS 225 (689)
Q Consensus 216 ~l~l~~N~l~ 225 (689)
+|++..|++.
T Consensus 305 ~L~i~~N~I~ 314 (505)
T KOG3207|consen 305 YLNISENNIR 314 (505)
T ss_pred eeecccCccc
Confidence 9999999985
No 491
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=4.5e-06 Score=80.23 Aligned_cols=140 Identities=11% Similarity=0.122 Sum_probs=102.2
Q ss_pred cccCCcceEEEEEecCCcEEEEEEecccCC-----chHHHHHHHHHHHHhccCC--CcceeEeeEEE-c--CCCCeEEEE
Q 005586 417 LGKGNFSSVYKGTLRDGTLVAIRSINVTSC-----KSEEAEFVKGLYLLTSLRH--ENIIRLRGFCC-S--RGRGECFLI 486 (689)
Q Consensus 417 lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~-~--~~~~~~~lV 486 (689)
-|+||-+.|++-.+. |..+-+|+-...-. .-.+..|.+|...|.++.. -.+.+.+ |+. . .....-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467888889998775 44688887642111 2356789999999998853 3344444 331 1 112346899
Q ss_pred EEcCCC-CCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCC--eEEecccc
Q 005586 487 YDFAPK-GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN--PLIADCGL 563 (689)
Q Consensus 487 ~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~--~kl~DfGl 563 (689)
+|-+++ -+|.+++.+..- .+.+...+..+..+++..++-||..+ +.|+|+.+.||+++.++. +++.||.-
T Consensus 104 Te~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~G-----v~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSVN-----RQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHCC-----CcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 997764 589999865432 23567778899999999999999998 999999999999986666 89999986
Q ss_pred cc
Q 005586 564 HK 565 (689)
Q Consensus 564 a~ 565 (689)
++
T Consensus 177 ~r 178 (216)
T PRK09902 177 SR 178 (216)
T ss_pred cc
Confidence 65
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.38 E-value=6.2e-09 Score=112.69 Aligned_cols=126 Identities=29% Similarity=0.388 Sum_probs=87.0
Q ss_pred CCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCch-hcCCCCCCCEEec
Q 005586 93 CLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPA-QIGSLKSLSVLTL 171 (689)
Q Consensus 93 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~l 171 (689)
.|.+.+.+.|+|. .+-..+.-++.|++|||++|+++.. +.+..|+.|+.|||++|+|. .+|. ....+. |+.|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 3666677777776 5666677778888888888888733 26777788888888888887 3443 333444 888888
Q ss_pred cCCcCCCCCCcccCCCCCCCeeeccCCcCCCCch-hhhhCCCCCcEEecccCcCC
Q 005586 172 QHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP-ESLANNAELLFLDVQNNTLS 225 (689)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~ 225 (689)
++|.++ .+- .+.+|.+|+.|||+.|-|++.-- ..+..+..|..|+|.+|.+.
T Consensus 240 rnN~l~-tL~-gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALT-TLR-GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHH-hhh-hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 888877 232 36778888888888887765321 22445667778888888875
No 493
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.37 E-value=1.2e-07 Score=103.36 Aligned_cols=104 Identities=27% Similarity=0.318 Sum_probs=66.5
Q ss_pred CCEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEee
Q 005586 68 RKVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQL 147 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 147 (689)
..+..|+|.+|.|.+... .+..+++|++|+|++|.|+...+ +..|+.|+.|++++|.++. + ..+..+.+|+.|++
T Consensus 95 ~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcchh-c-cCCccchhhhcccC
Confidence 456777777777764332 25667777777777777774443 4556667777777777762 2 34455777777777
Q ss_pred ecccCCCCCc-hhcCCCCCCCEEeccCCcCC
Q 005586 148 CCNQLTGNIP-AQIGSLKSLSVLTLQHNRLN 177 (689)
Q Consensus 148 s~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~ 177 (689)
++|+++..-+ . +..+.+|+.+++.+|.+.
T Consensus 170 ~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 170 SYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred Ccchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 7777764333 1 456666777777777665
No 494
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.34 E-value=3e-06 Score=83.24 Aligned_cols=134 Identities=17% Similarity=0.153 Sum_probs=93.1
Q ss_pred cccccccCCcceEEEEEecCCcEEEEEEecccCC---------------------chHHHHHHHHHHHHhccCCC--cce
Q 005586 413 EVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC---------------------KSEEAEFVKGLYLLTSLRHE--NII 469 (689)
Q Consensus 413 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------------------~~~~~~f~~e~~~l~~l~H~--niv 469 (689)
..+.||-|.-+.||.|..++|.++|||.-+.... ........+|.++|.++.-. .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 3578999999999999999999999997643221 01123567888999998655 666
Q ss_pred eEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCcee
Q 005586 470 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL 549 (689)
Q Consensus 470 ~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiL 549 (689)
+.+++ +.-++||||+++--|...= ++-...-.|+..|++-+.-.-..| |||+|+..-||+
T Consensus 175 ~P~~~------nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~G-----iVHGDlSefNIl 234 (304)
T COG0478 175 KPIAW------NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRRG-----IVHGDLSEFNIL 234 (304)
T ss_pred Ccccc------ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHcC-----ccccCCchheEE
Confidence 66654 2357999999875443321 111112233444444444443445 999999999999
Q ss_pred ecCCCCeEEeccccccc
Q 005586 550 IDQQFNPLIADCGLHKL 566 (689)
Q Consensus 550 l~~~~~~kl~DfGla~~ 566 (689)
+++|+.+.+.||-.+..
T Consensus 235 V~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 235 VTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EecCCCEEEEeCccccc
Confidence 99999999999986643
No 495
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.32 E-value=1.3e-07 Score=103.00 Aligned_cols=130 Identities=32% Similarity=0.389 Sum_probs=67.8
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEeeecccCCCCCchhcCCCCCCCEE
Q 005586 90 GLKCLSGLYLHYNSLSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQLCCNQLTGNIPAQIGSLKSLSVL 169 (689)
Q Consensus 90 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 169 (689)
.+..++.+++..|.+.. +-..+..+++|+.|+|.+|+|. .+...+..+++|++|+|++|+++... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34445555555555552 2233555566666666666665 33333555566666666666665332 24444556666
Q ss_pred eccCCcCCCCCCcccCCCCCCCeeeccCCcCCCCch-hhhhCCCCCcEEecccCcCCc
Q 005586 170 TLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP-ESLANNAELLFLDVQNNTLSG 226 (689)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~~ 226 (689)
++++|.++ .+. .+..+..|+.+++++|+++..-+ . +..+.+++.+++.+|.+.-
T Consensus 146 ~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 146 NLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred eeccCcch-hcc-CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 66666665 222 24445566666666666553322 1 3445555566666665543
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.23 E-value=1e-05 Score=83.45 Aligned_cols=254 Identities=16% Similarity=0.162 Sum_probs=147.9
Q ss_pred ccccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhcc-CCCcceeEeeE----EEcCCCCe-EEEEE
Q 005586 414 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGF----CCSRGRGE-CFLIY 487 (689)
Q Consensus 414 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~----~~~~~~~~-~~lV~ 487 (689)
.+.||+|+-+.+|-.-.- +..|| |++...-. ....+- +..|... .||-+-.=+.| .+..++.. .-++|
T Consensus 16 gr~LgqGgea~ly~l~e~-~d~VA-KIYh~Ppp-a~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-RDQVA-KIYHAPPP-AAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CccccCCccceeeecchh-hchhh-eeecCCCc-hHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 467999999999864311 22344 66654331 112221 2333333 45543321111 11122222 44566
Q ss_pred EcCCCC-CHHHHhhh--cCCCCCCCCHHHHHHHHHHHHHHHhhhhCCCCCCCceeecCCCCCceeecCCCCeEEeccccc
Q 005586 488 DFAPKG-KLSKYLDQ--EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 564 (689)
Q Consensus 488 e~~~~g-sL~~~L~~--~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla 564 (689)
..+++- -...++.. .+.+-...+|.-.+..++.+|.+.+-||..| .+-+|+.++|+|+.++..+.+.|-.--
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G-----h~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG-----HVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC-----CcccccCccceeeecCceEEEEcccce
Confidence 666543 22223221 1122345889999999999999999999988 578999999999999999999874322
Q ss_pred ccccCCceeeeecCCCCCCCCCccccc-----cCCCCCcccchhHHHHHHHHHhC-CCCcchhHHH---------HHhhh
Q 005586 565 KLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTG-SLVLTSSMRL---------AAESA 629 (689)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~ksDV~sfGvvl~elltG-~~p~~~~~~~---------~~~~~ 629 (689)
.....+. ......+...|.+||.-. +..-+...|-|.+||+++|++.| +.||.+-... .....
T Consensus 165 qi~~ng~--~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 165 QINANGT--LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeccCCc--eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 2222222 222345667799999754 33457889999999999999987 8888542100 00011
Q ss_pred hhhHhhcc--ccCC---CCC-HHHHHHHHHHHHHhccCC--CCCCCCHHHHHHHHHhhC
Q 005586 630 TFENFIDR--NLKG---KFS-ESEAAKLGKMALVCTHED--PENRPTMEAVIEELTVAA 680 (689)
Q Consensus 630 ~~~~~~~~--~~~~---~~~-~~~~~~l~~l~~~Cl~~d--p~~RPs~~evl~~L~~~~ 680 (689)
.+...-+. .++. ..+ .-....+..+..+|+... +.-||+.+.-+..|...+
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 11111111 1110 111 122445677788888754 468999998887766543
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.23 E-value=7.3e-06 Score=90.08 Aligned_cols=147 Identities=13% Similarity=0.174 Sum_probs=96.4
Q ss_pred cCCcccccccCCcceEEEEEecCCcEEEEEEecccCCc---------------------------------------hHH
Q 005586 410 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK---------------------------------------SEE 450 (689)
Q Consensus 410 ~f~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------------------------------~~~ 450 (689)
.|. .+.|+.++-|.||+|++++|+.||||+.+..-.+ ..+
T Consensus 127 eF~-~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 127 EFE-PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HcC-CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 444 3689999999999999999999999998532100 011
Q ss_pred HHHHHHHHHHhcc----CCCcceeEeeEEEcCCCCeEEEEEEcCCCCCHHHHhhhcCCCCCCCCHHHHHHHHHHHHHH-H
Q 005586 451 AEFVKGLYLLTSL----RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG-I 525 (689)
Q Consensus 451 ~~f~~e~~~l~~l----~H~niv~l~g~~~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~ia~~ia~g-L 525 (689)
-+|.+|..-+.++ +...-+.+=..|++- .....++|||++|-.+.+........ .+ +..|+..++++ +
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~-t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDVYVPKVYWEY-TTRRVLTMEWIDGIKISDIAALKSAG---ID---RKELAELLVRAFL 278 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCeEeceeehhc-cCCcEEEEEeeCCEecccHHHHHhcC---CC---HHHHHHHHHHHHH
Confidence 2444555555544 233333444445432 35678999999998888884322211 44 23333333332 2
Q ss_pred hhhhCCCCCCCceeecCCCCCceeecCCCCeEEecccccccccC
Q 005586 526 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 569 (689)
Q Consensus 526 ~yLH~~~~~~~~ivH~dlk~~NiLl~~~~~~kl~DfGla~~~~~ 569 (689)
..+-..+ +.|.|..|-||+++.+++.-+.|||+...+.+
T Consensus 279 ~q~~~dg-----ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRDG-----FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhcC-----ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2222234 89999999999999999999999999887754
No 498
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.21 E-value=2.1e-05 Score=78.13 Aligned_cols=139 Identities=11% Similarity=0.143 Sum_probs=81.3
Q ss_pred cccccCCcceEEEEEecCCcEEEEEEecccCCchHHHHHHHHHHHHhccCCCcc--eeEeeEEEcCCCCeEEEEEEcCCC
Q 005586 415 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI--IRLRGFCCSRGRGECFLIYDFAPK 492 (689)
Q Consensus 415 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~f~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~~~lV~e~~~~ 492 (689)
..||+|..+.||+. .|..+++|...... ......+|.+++..+..-.+ .+.++++ +..+...+|||+++|
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~--~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLV--EDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEE--ecCCeeeeeeeecCC
Confidence 57999999999984 24567788876533 22345788888888764433 4555555 334556789999988
Q ss_pred CC-HHHHh---------------------hhcCCCCCCCCHHHHHHHH-----------HHH-HHHHhhhhCCCCCCCce
Q 005586 493 GK-LSKYL---------------------DQEEGSSNVLDWSTRVSII-----------IGI-AKGIGYLHSSEVNKPAI 538 (689)
Q Consensus 493 gs-L~~~L---------------------~~~~~~~~~l~~~~~~~ia-----------~~i-a~gL~yLH~~~~~~~~i 538 (689)
.+ +...+ |...... .....+..-. ..+ .....+|... ...+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 155 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEV-PDTSTC 155 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhC-CCCCce
Confidence 63 22111 1110000 1111100000 000 1112223221 134567
Q ss_pred eecCCCCCceeecCCCCeEEecccccc
Q 005586 539 VHRNLSVEKVLIDQQFNPLIADCGLHK 565 (689)
Q Consensus 539 vH~dlk~~NiLl~~~~~~kl~DfGla~ 565 (689)
+|+|+.|.||++++++ +.|.||+.+.
T Consensus 156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 156 LHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred EecCCCCCcEEEcCCC-cEEEechhcC
Confidence 9999999999999988 9999999764
No 499
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.19 E-value=1.2e-06 Score=102.45 Aligned_cols=148 Identities=27% Similarity=0.294 Sum_probs=97.4
Q ss_pred CEEEEEcCCCCcccccCcCcCCCCCCCEEEccCCc--ccccCCccccCCCCCcEEEecccCCCCCCCccccCCccccEEe
Q 005586 69 KVANISLQGKGLTGKLSPSLSGLKCLSGLYLHYNS--LSGEIPKEIRNLTELTDLYLDVNNLSGNIPPEIGSMASLQVLQ 146 (689)
Q Consensus 69 ~v~~l~L~~~~l~g~~~~~~~~l~~L~~L~L~~N~--l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 146 (689)
.+..+.+-+|.+. .++... ..+.|++|-+..|. +.-..++.|..++.|++||||+|.=-+.+|..+++|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 3445555555443 222222 22367888888886 4434444577788888888888776667888888888888888
Q ss_pred eecccCCCCCchhcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCeeeccCCc--CCCCchhhhhCCCCCcEEec
Q 005586 147 LCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNS--LFGTIPESLANNAELLFLDV 219 (689)
Q Consensus 147 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~--l~g~~p~~l~~~~~L~~l~l 219 (689)
|++..++ .+|..+++|..|.+|++..+.-...+|..+..|.+|++|.+.... .+...-..+.++.+|+.+..
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 8888887 788888888888888888777655666666678888888776554 22223334444555555444
No 500
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.16 E-value=5.1e-07 Score=90.69 Aligned_cols=158 Identities=23% Similarity=0.293 Sum_probs=71.9
Q ss_pred CCEEEEEcCCCCcccc----cCcCcCCCCCCCEEEccCC---cccccCCcc-------ccCCCCCcEEEecccCCCCCCC
Q 005586 68 RKVANISLQGKGLTGK----LSPSLSGLKCLSGLYLHYN---SLSGEIPKE-------IRNLTELTDLYLDVNNLSGNIP 133 (689)
Q Consensus 68 ~~v~~l~L~~~~l~g~----~~~~~~~l~~L~~L~L~~N---~l~g~~p~~-------~~~l~~L~~L~Ls~N~l~g~~p 133 (689)
..++.|+|++|.+.-. +...+.+.++|+.-++|.= ++...+|.. +..+++|+.||||.|.|.-.-+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 3566677777665422 2233444455555555431 122223322 2334455555555555543333
Q ss_pred ccc----cCCccccEEeeecccCCCCCc--------------hhcCCCCCCCEEeccCCcCCCC----CCcccCCCCCCC
Q 005586 134 PEI----GSMASLQVLQLCCNQLTGNIP--------------AQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLK 191 (689)
Q Consensus 134 ~~~----~~l~~L~~L~Ls~N~l~g~~p--------------~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~ 191 (689)
..| ..+.+|+.|+|.+|.+. ..- .-.++-+.|+++..++|++... +...|...+.|+
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 322 33455555555555543 111 1122334555555555555421 112334445555
Q ss_pred eeeccCCcCCCC----chhhhhCCCCCcEEecccCcCCc
Q 005586 192 RLDLSFNSLFGT----IPESLANNAELLFLDVQNNTLSG 226 (689)
Q Consensus 192 ~L~ls~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~~ 226 (689)
.+.++.|.+.-. +-..|..+++|+.|||++|.|+-
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~ 227 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL 227 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh
Confidence 555555554311 22344555555555555555553
Done!