BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005587
(689 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ F++ LQ +++FS +N++G G G VY+ +L DG L+AVK+L K Q + +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQFQT 84
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V I H N++ L+G+C +RLL+Y Y +NG++ L E + L W R R+
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
ALG+AR L YLH+ C P I+HR+ K+ANI V D GLA L+
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ F++ LQ +++F +N++G G G VY+ +L DG L+AVK+L K +Q + +F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL-KEERTQGGELQFQT 76
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V I H N++ L+G+C +RLL+Y Y +NG++ L E + L W R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
ALG+AR L YLH+ C P I+HR+ K+ANI V D GLA L+
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA 545
S+ PF + R + L++ TN+F + LIG G+ G VY+ L DG +A+K+ +
Sbjct: 17 SSSYLVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTP 73
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
S Q +EF + + RH ++V L G+C E + +LIY+Y NG L+ L+ D
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++SW R+ + +GAAR L YLH I+HR+ KS NI ++D G++
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA 545
S+ PF + R + L++ TN+F + LIG G+ G VY+ L DG +A+K+ +
Sbjct: 17 SSSYLVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTP 73
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
S Q +EF + + RH ++V L G+C E + +LIY+Y NG L+ L+ D
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++SW R+ + +GAAR L YLH I+HR+ KS NI ++D G++
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IGAG G+V+RA+ G +AVK L ++ ++ +EFL V + R+RH NIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ EY S G+L +LH + L R+ MA A+ + YLH PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
HRN KS N+ V V D GL+ L +S +S S
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IGAG G+V+RA+ G +AVK L ++ ++ +EFL V + R+RH NIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ EY S G+L +LH + L R+ MA A+ + YLH PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
HR+ KS N+ V V D GL+ L +S
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 129 -PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 129 -PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 62
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 123 -PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N G G G VY+ + + +AVKKL
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 120 -PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 130
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + + S+ D+F+E + ++ H +
Sbjct: 30 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKL 84
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 141
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
C ++HR+ + N + VSD G+ +
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 173
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ KS NI V + D GLA
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 64
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 121
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
C ++HR+ + N + VSD G+ +
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 8 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 62
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 119
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
C ++HR+ + N + VSD G+ +
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 151
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 13 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 67
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 124
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
C ++HR+ + N + VSD G+ +
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 156
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA S S S L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 128
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 153
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR------- 563
+ E +IG G G VYRA G +AVK A+ D++ + + N+ +
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVK-----AARHDPDEDISQTIENVRQEAKLFAM 62
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
++H NI+ L+G C + L+ E+ G L +L + + + A+ AR
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARG 117
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
+ YLH+ PI+HR+ KS+NI
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNI 139
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 11 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 65
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L+ E+ +G L D L + L + T + M L + YL E
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 122
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
C ++HR+ + N + VSD G+ +
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV 154
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
HR+ KS NI V + D GLA + S S S L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ KS NI V + D GLA
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 512 SQENLIGAGMLGSVYRAQLP--DGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
+++ +IGAG G VY+ L GK +A+K L + +Q+ D FL + + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSH 105
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY 626
NI+ L+G +++ ++I EY NG L L D S + M G A ++Y
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKY 162
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
L + VHR+ + NI VSD GL+ ++
Sbjct: 163 LANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 146
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ KS NI V + D GLA
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ KS NI V + D GLA
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 64
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 121
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
++HR+ + N + VSD G+ +
Sbjct: 122 ---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFV 153
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX-----XAVSVSDCGLA 661
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI V+D GL
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL- 175
Query: 662 PLISSGSVSQVS 673
S SV VS
Sbjct: 176 ---SQQSVHSVS 184
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANI 645
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNI 155
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANI 645
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNI 155
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 514 ENLIGAGMLGSVYRAQL--PDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +L P K +A+K L K ++++ EFL + + + H NI
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G +++ E+ NG L L +D + + M G A + YL E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAE 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ VHR+ + NI VSD GL+ + S
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 170
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 514 ENLIGAGMLGSVYRAQL--PDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +L P K +A+K L K ++++ EFL + + + H NI
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G +++ E+ NG L L +D + + M G A + YL E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAE 136
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ VHR+ + NI VSD GL+ + S
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 172
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 74 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HRN ++ANI + ++D GLA LI +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKGY 575
+G G G V+R L G+ +AVK SS+ + F E + N +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF----SSRDEQSWFRETEIYNTVLLRHDNIL---GF 67
Query: 576 CAE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q LI Y +G+L D L + L + +R+A+ AA L +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLH 122
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
EI +P I HR+FKS N+ ++D GLA + S GS
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GLA ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVL 197
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 88 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 86 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIE 168
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIE 166
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 87 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIE 169
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 83 TQEPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 136
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
E ++G G G V +A+ K +A+K+++ S+ + F+ + + R+ H NIV+L
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-----KNNLSWNTRIRMALGAARALEYLH 628
G C L+ EY G+L ++LH + L + +SW L ++ + YLH
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 120
Query: 629 EICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLA 661
+ ++HR+ K N+ V + D G A
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 339
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HRN + N V V+D GL+ L++ + +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 73 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 80 TQEPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 133
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIE 162
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 79 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 132
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIE 161
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L + ++ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ ++C +L LH + I +A A+ ++YLH I+
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHA---KNII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
HR+ KS NI V + D GLA + S S SQ
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 514 ENLIGAGMLGSVYRAQLP-DGK---LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V L GK +A+K L + +Q+ D FL + + + H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 96
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I E+ NG+L L +D + + M G A ++YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ + NI VSD GL+ +
Sbjct: 154 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ ++ANI + ++D GLA LI
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +LP + L A+K L + +Q+ D FL + + + H NI
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNI 85
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + +++ EY NG+L L +D + + M G + ++YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND---GQFTVIQLVGMLRGISAGMKYLSD 142
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ + NI VSD GL+ ++
Sbjct: 143 MGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 91
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 148
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 131
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
E ++G G G V +A+ K +A+K+++ S+ + F+ + + R+ H NIV+L
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-----KNNLSWNTRIRMALGAARALEYLH 628
G C L+ EY G+L ++LH + L + +SW L ++ + YLH
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 119
Query: 629 EICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLA 661
+ ++HR+ K N+ V + D G A
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 101
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 158
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 159 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ A AR ++YL Q +HRN + NI ++D GL+
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++ANI + ++D GLA LI +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXT 165
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 76
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 123
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HRN + NI V + D GL ++
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 33/195 (16%)
Query: 511 FSQENL-----IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
F +ENL +G+G G V A + +AVK L ++A S +++ EL
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH------SDDELK-------- 605
H NIV L G C G LI+EYC G L + L S+DE++
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 606 -----NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
N L++ + A A+ +E+L VHR+ + N+ V + D GL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 661 APLISSGSVSQVSHN 675
A I S S V N
Sbjct: 219 ARDIMSDSNYVVRGN 233
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 488 KTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRAS 546
K KP S + + ++ +G G G VY L +AVK L +
Sbjct: 238 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--- 294
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+ +EFL+ + I+H N+V+L G C +I E+ + G L D L + +
Sbjct: 295 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
N + MA + A+EYL + +HRN + N V V+D GL+ L++
Sbjct: 355 NAV--VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 409
Query: 667 GSVS 670
+ +
Sbjct: 410 DTYT 413
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 488 KTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRAS 546
K KP S + + ++ +G G G VY L +AVK L +
Sbjct: 196 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--- 252
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+ +EFL+ + I+H N+V+L G C +I E+ + G L D L + +
Sbjct: 253 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 312
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
N + MA + A+EYL + +HRN + N V V+D GL+ L++
Sbjct: 313 NAV--VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 367
Query: 667 GSVS 670
+ +
Sbjct: 368 DTYT 371
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 165
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 516 LIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G + G+++ +K+L + Q+ FL+ V + + H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT--FLKEVKVMRCLEHPNVLKFIG 74
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + I EY GTL+ ++ S D + W+ R+ A A + YLH +
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---N 128
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
I+HR+ S N V V+D GLA L+
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLM 158
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHAN 568
FS IG G G+VY A+ + + +++A+KK+ S +K + ++ V + ++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 569 IVELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++ +G Y EH L+ EYC G+ D+L K L + GA + L YL
Sbjct: 116 TIQYRGCYLREHTA-WLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL 170
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
H ++HR+ K+ NI V + D G A +++
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 514 ENLIGAGMLGSVYRAQLP-DGK---LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V L GK +A+K L + +Q+ D FL + + + H N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 70
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I E+ NG+L L +D + + M G A ++YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR + NI VSD GL+ +
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLSRFL 159
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYV 154
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 106
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 153
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYV 161
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 136
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYV 150
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ A AR ++YL Q +HR+ + NI ++D GL+
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 494 TTARSFTIASLQQYTNSFSQE---------NLIGAGMLGSVY--RAQLPDGK--LLAVKK 540
T FT Q F++E +IG G G V R ++P + +A+K
Sbjct: 5 TFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKT 64
Query: 541 LDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS 600
L + +Q+ D FL + + + H NI+ L+G + ++I EY NG+L L
Sbjct: 65 LKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D + + M G ++YL ++ VHR+ + NI VSD G+
Sbjct: 124 ND---GRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGM 177
Query: 661 APLI 664
+ ++
Sbjct: 178 SRVL 181
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHAN 568
FS IG G G+VY A+ + + +++A+KK+ S +K + ++ V + ++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 569 IVELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++ +G Y EH L+ EYC G+ D+L K L + GA + L YL
Sbjct: 77 TIQYRGCYLREHTA-WLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL 131
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
H ++HR+ K+ NI V + D G A +++
Sbjct: 132 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ A AR ++YL Q +HR+ + NI ++D GL+
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 82
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 129
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 133
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ + N V VSD GL+ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 80
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 127
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 172
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 134
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 81
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 128
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 140
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 145
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 140
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 134
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 133
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 168
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 134
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+HR+ + N V V+D GL+ L++ + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 74
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 121
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 79
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 126
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++I EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 73
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 120
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ + +AVK L S Q FLE N + ++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+I EY + G+L D L SD+ K L ++ +A+ E + I + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-----KLIDFSAQIAEGMAYIERKNYI 132
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
HR+ ++AN+ ++D GLA +I +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 166
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++I EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 520 GMLGSVYRAQLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
G G V++AQL + + +AVK DK++ + + V ++ ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYE------VYSLPGMKHENILQFIG-A 86
Query: 577 AEHGQRL-----LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ G + LI + G+L D L + N +SWN +A AR L YLHE
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDI 141
Query: 632 -------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSH 674
+P I HR+ KS N+ ++D GLA +G + +H
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L + E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC NGTL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
R+ AL Y+H I+HR+ K NI V + D GLA
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IG G G V R ++P + +A+K L + +Q+ D FL + + + H NI
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 71
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I EY NG+L L +D + + M G ++YL +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ + NI VSD G++ ++
Sbjct: 129 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IG G G V R ++P + +A+K L + +Q+ D FL + + + H NI
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I EY NG+L L +D + + M G ++YL +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ + NI VSD G++ ++
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + +IRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKIRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 29 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 79
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 134
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ VSD GL SS
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 128 LRYIHSMS---LVHMDIKPSNI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 126 LRYIHSMS---LVHMDIKPSNI 144
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 20 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 70
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 125
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ VSD GL SS
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 160
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +LP + +A+K L + +Q+ D FL + + + H N+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-FLCEASIMGQFDHPNV 106
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V L+G +++ E+ NG L L D + + M G A + YL +
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD---GQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ + NI VSD GL+ +I
Sbjct: 164 M---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIE 196
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 201 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 251
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 306
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ VSD GL SS
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 124 LRYIHSMS---LVHMDIKPSNI 142
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 22/159 (13%)
Query: 517 IGAGMLG-SVYRAQLPDGKLLAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
IG G G ++ DG+ +K+++ R SS+++++ E V + ++H NIV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRRE-VAVLANMKHPNIVQYRE 90
Query: 575 YCAEHGQRLLIYEYCSNGTL-------QDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
E+G ++ +YC G L + +L +D++ L W +I + AL+++
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI---LDWFVQICL------ALKHV 141
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
H+ I+HR+ KS NI V + D G+A +++S
Sbjct: 142 HD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 126 LRYIHSMS---LVHMDIKPSNI 144
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 14 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 64
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ VSD GL SS
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C ++ EY G L D L + + ++ + MA + A+EYL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISSAMEYLE-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
+ +HR+ + N V V+D GL+ L++ + +
Sbjct: 148 -KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC N TL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
R+ AL Y+H I+HRN K NI V + D GLA
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ + +AVK L S Q FLE N + ++H +V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 76
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I E+ + G+L D L SD+ K L ++ +A+ E + I + +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-----KLIDFSAQIAEGMAYIERKNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLI 664
HR+ ++AN+ ++D GLA +I
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVI 159
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 35/182 (19%)
Query: 511 FSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELVN 559
F ++NL+ G G G V +A K +AVK L + AS + D L N
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFN 78
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL--------------- 604
+ ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 605 -----KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD G
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 660 LA 661
L+
Sbjct: 196 LS 197
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 131
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+YL ++ VHR+ + NI VSD GL+ ++
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 510 SFSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELV 558
F ++NL+ G G G V +A K +AVK L + AS + D L
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEF 77
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-------------- 604
N + ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 605 ------KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDC 658
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDF 194
Query: 659 GLA 661
GL+
Sbjct: 195 GLS 197
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 123 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 156
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 63
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 64 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 121 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 154
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 510 SFSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELV 558
F ++NL+ G G G V +A K +AVK L + AS + D L
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEF 77
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-------------- 604
N + ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 605 ------KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDC 658
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDF 194
Query: 659 GLA 661
GL+
Sbjct: 195 GLS 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 491 KPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRAS 546
+P RSFT + + E +IG+G G V R ++P + +A+K L +
Sbjct: 34 EPGRAGRSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+Q+ D FL + + + H NI+ L+G +++ EY NG+L L + D
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---G 146
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ + M G + YL ++ VHR+ + N+ VSD GL+ ++
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 72 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 125
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
I Q +HR+ ++ANI ++D GLA +I +
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 167
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 244
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 245 LVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 298
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
I Q +HR+ ++ANI ++D GLA +I
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI 334
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 491 KPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRAS 546
+P RSFT + + E +IG+G G V R ++P + +A+K L +
Sbjct: 34 EPGRAGRSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+Q+ D FL + + + H NI+ L+G +++ EY NG+L L + D
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---G 146
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ + M G + YL ++ VHR+ + N+ VSD GL+ ++
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 323
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 324 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 380
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ ++ANI V+D GLA LI
Sbjct: 381 RMN---YVHRDLRAANILVGENLVCKVADFGLARLI 413
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K+ NI + ++D G++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K+ NI + ++D G++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ +ANI V+D GLA LI
Sbjct: 132 RM---NYVHRDLAAANILVGENLVCKVADFGLARLIE 165
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K+ NI + ++D G++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI E+ G+L++ L E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ +HR+ + NI V + D GL ++
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 67
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 68 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 125 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 158
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 64
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 65 LVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 122 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 155
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ ++ANI V+D GLA LI
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ ++ANI V+D GLA LI
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC N TL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
R+ AL Y+H I+HR+ K NI V + D GLA
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 238
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 239 LVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 292
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I Q +HR+ ++ANI ++D GLA
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 517 IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+ +L D L+AVK + K +FL+ + + H NIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C + ++ E G L ++ L T ++M AA +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ + N + +SD G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 101
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 156
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 517 IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+ +L D L+AVK + K +FL+ + + H NIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C + ++ E G L ++ L T ++M AA +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ + N + +SD G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ ++ANI V+D GLA LI
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 88
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 143
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 510 SFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKK------LDKRASSQQKDDEFLELVNNID 562
+F E IG G VYRA L DG +A+KK +D +A + + ++ ++ +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA-----DCIKEIDLLK 87
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
++ H N+++ E + ++ E G L M+ + K + T + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLT 677
ALE++H ++HR+ K AN+ V + D GL SS + + +H+L
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLV 197
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L + FL+ + ++RH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMSPEAFLQEAQVMKKLRHEK 241
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 242 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+ VHR+ ++ANI V+D GL LI
Sbjct: 299 RM---NYVHRDLRAANILVGENLVCKVADFGLGRLI 331
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 68
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 123
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 63
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 118
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNI 561
S+++Y N L+G G G V + + D G+++A+KK + + + + +
Sbjct: 23 SMEKYENL----GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 562 DRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
++RH N+V L C + + L++E+ + L D+ + N L + +
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL----ELFPNGLDYQVVQKYLFQII 134
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ + H I+HR+ K NI V + D G A +++
Sbjct: 135 NGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 65
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 120
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 62
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 117
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
EI +P I HR+ KS NI ++D GLA
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 27/164 (16%)
Query: 520 GMLGSVYRAQLPDGKLLAVK--KLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCA 577
G G V++AQL + +AVK L + S Q + + F + ++H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIF-----STPGMKHENLLQFIA-AE 78
Query: 578 EHGQRL-----LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE--- 629
+ G L LI + G+L D L N ++WN +A +R L YLHE
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 630 IC-----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
C +P I HR+FKS N+ ++D GLA G
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G GSVY+A G+++A+K++ + Q E ++ ++ + + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ----EIIKEISIMQQCDSPHVVKYYGS 92
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA-RALEYLHEICQPP 634
++ ++ EYC G++ D++ L+N I L + + LEYLH + +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K+ NI ++D G+A
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 517 IGAGMLGSVYRAQL-PDG----KLLAVKKLDKRASSQQKDD--EFLELVNNIDRIRHANI 569
+G G G V + P+G + +AVK L + D + +E++ N+ H NI
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL---YHENI 85
Query: 570 VELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
V+ KG C E G LI E+ +G+L++ L + KN ++ +++ A+ + ++YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYL 142
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ V + D GL I +
Sbjct: 143 G---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 517 IGAGMLGSVYRAQL-PDG----KLLAVKKLDKRASSQQKDD--EFLELVNNIDRIRHANI 569
+G G G V + P+G + +AVK L + D + +E++ N+ H NI
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL---YHENI 73
Query: 570 VELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
V+ KG C E G LI E+ +G+L++ L + KN ++ +++ A+ + ++YL
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYL 130
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ V + D GL I +
Sbjct: 131 G---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 166
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 480 GTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQ---ENLIGAGMLGSVYRAQLPDGKLL 536
G + S +A+ F S T LQ++ F Q LIG G G VY + G++
Sbjct: 1 GPEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEV- 58
Query: 537 AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQD 596
A++ +D ++ + F V + RH N+V G C +I C TL
Sbjct: 59 AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS 118
Query: 597 MLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVS 656
++ + K L N ++A + + YLH I+H++ KS N+ V ++
Sbjct: 119 VVR---DAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-IT 171
Query: 657 DCGL 660
D GL
Sbjct: 172 DFGL 175
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY + G+L D L E L + M+ A + Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY + G+L D L E L + M+ A + Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ VHR+ ++ANI V+D GLA LI
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDMLHSDD----ELKNNLSWNTR--------IRMALGAARALEYLHEICQPPIVHRNFK 641
L++ L + + E N S N + A AR +EYL +HR+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 642 SANIXXXXXXAVSVSDCGLA 661
+ N+ + ++D GLA
Sbjct: 178 ARNVLVTEDNVMKIADFGLA 197
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI----R 565
F NL+G G VYRA+ + G +A+K +DK+A + ++ V N +I +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG---MVQRVQNEVKIHCQLK 69
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNL---SWNTRIRMALGAAR 622
H +I+EL Y + L+ E C NG + + LKN + S N
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEM------NRYLKNRVKPFSENEARHFMHQIIT 123
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ YLH I+HR+ +N+ + ++D GLA
Sbjct: 124 GMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 30/162 (18%)
Query: 516 LIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI---RHANIVEL 572
LIG G G+VY+ L D + +AVK A+ Q +E NI R+ H NI
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF-SFANRQNFINE-----KNIYRVPLMEHDNIARF 72
Query: 573 -----KGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALE 625
+ + LL+ EY NG+L L H+ D W + R+A R L
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-------WVSSCRLAHSVTRGLA 125
Query: 626 YLH------EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH + +P I HR+ S N+ +SD GL+
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 515 NLIGAGMLGSVYRAQLP--DGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G G GSV L DG L AVK + SSQ++ +EFL + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 571 ELKGYCAEHGQR-----LLIYEYCSNGTLQD-MLHSDDEL-KNNLSWNTRIRMALGAARA 623
L G C E + ++I + G L +L+S E ++ T ++ + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
+EYL +HR+ + N V V+D GL+ I SG
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV-----E 571
IG G G V+ + K+ +S ++ E + V +RH NI+ +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTV----LMRHENILGFIAAD 100
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH-EI 630
+KG Q LI +Y NG+L D L S L + +++A + L +LH EI
Sbjct: 101 IKG-TGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 631 C----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+P I HR+ KS NI ++D GLA
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 77
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 133
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 520 GMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEH 579
G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAFYYE 79
Query: 580 GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRN 639
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+HR+
Sbjct: 80 NNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRD 133
Query: 640 FKSANIXXXXXXAVSVSDCGLA 661
K+ NI + ++D G++
Sbjct: 134 LKAGNILFTLDGDIKLADFGVS 155
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 215
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLA 238
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 504 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + + +G G G VY+A+ G+++A+K++ A + + ++ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL-GAAR 622
+ H NIV L L++E+ +D+ DE K L +++I++ L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLR 130
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ + H Q I+HR+ K N+ A+ ++D GLA
Sbjct: 131 GVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 30/188 (15%)
Query: 517 IGAGMLGSVYRAQLP------DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
IG G G V++A+ P ++AVK L + AS+ + D F + + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPNIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML------------HSDDELKNN--------LSW 610
+L G CA L++EY + G L + L HSD + LS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 611 NTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
++ +A A + YL E VHR+ + N V ++D GL+ I S
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 671 QVSHNLTI 678
+ N I
Sbjct: 231 KADGNDAI 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 74
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 130
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 74
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVR---EHKDNIGSQYLLNWCVQIAKG 130
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ VHR+ + NI V ++D GLA L+
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRI 564
+ ++G+G G+VY+ +P+G+ + + K+ + + + EF++ + +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H ++V L G C +L + + +G L + +H E K+N+ + + A+ +
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGM 153
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
YL E +VHR+ + N+ V ++D GLA L+
Sbjct: 154 MYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 98
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 99 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 154
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 106
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 165
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 108
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 167
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 103 SSIRVIDLSNNHIGGSI-PSIL---PVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNN 158
+S+ +DLS+N+ G I P++ T+Q +L +N F+G IP +L+ + L + L+
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 159 NLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSL 193
N LSG IP + SL+ L GE+P L
Sbjct: 425 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 105 IRVIDLSNNHIGGSIP-SILPVTMQNFF-LSDNQFSGSIPSSLATLTLLTDMSLNNNLLS 162
+ +++L +N I GSIP + + N LS N+ G IP +++ LT+LT++ L+NN LS
Sbjct: 655 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 714
Query: 163 GEIPDAFQ 170
G IP+ Q
Sbjct: 715 GPIPEMGQ 722
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 102 FSSIRVIDLSNNHIGGSIPSILPV--TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNN 159
S +R + L N + G IP L T++ L N +G IPS L+ T L +SL+NN
Sbjct: 438 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 497
Query: 160 LLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
L+GEIP L L G +P L + L
Sbjct: 498 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD--------------------CRSL 537
Query: 220 PLRDLNIENNLFSGPIPEKMLQ 241
DLN NLF+G IP M +
Sbjct: 538 IWLDLNT--NLFNGTIPAAMFK 557
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 SSIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNN 159
+++ I LSNN + G IP + ++N LS+N FSG+IP+ L L + LN N
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 160 LLSGEIPDAFQSLTGLI 176
L +G IP A +G I
Sbjct: 546 LFNGTIPAAMFKQSGKI 562
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S+ +D+S N + G IP + +M F L N SGSIP + L L + L++N
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 161 LSGEIPDAFQSLTGLIXXXXXXXXXXGELP 190
L G IP A +LT L G +P
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 104 SIRVIDLSNNHIGGSIPSILPV---TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S++ + L+ N G IP L T+ LS N F G++P + +LL ++L++N
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 326
Query: 161 LSGEIP-DAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
SGE+P D + GL GELP SL
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS-------------------- 366
Query: 220 PLRDLNIENNLFSGPIPEKMLQIP 243
L L++ +N FSGPI + Q P
Sbjct: 367 -LLTLDLSSNNFSGPILPNLCQNP 389
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 126 TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXX 185
+M +S N SG IP + ++ L ++L +N +SG IPD L GL
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 186 XGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDLPLRDLNIENNLFSGPIPEKMLQIPNF 245
G +P ++ L ++++ NN SGPIPE M Q F
Sbjct: 690 DGRIPQAMSALTM----------------------LTEIDLSNNNLSGPIPE-MGQFETF 726
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 504 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + + +G G G VY+A+ G+++A+K++ A + + ++ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL-GAAR 622
+ H NIV L L++E+ +D+ DE K L +++I++ L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLR 130
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ + H Q I+HR+ K N+ A+ ++D GLA
Sbjct: 131 GVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLA 197
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 76
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 123
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ VHR+ + NI V ++D GLA L+
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 106
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 165
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 151
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 210
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 255
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 88
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 135
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ VHR+ + NI V ++D GLA L+
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS--------DDELKNNLSWNTRIRMALGAA 621
L G C + G L+ I E+C G L L S D K+ L+ I + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ +E+L +HR+ + NI V + D GLA
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS----------DDELKNNLSWNTRIRMALG 619
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 72
Query: 572 LKG--YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G Y + L+ EY +G L+D L R R L A+R L Y +
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 119
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
IC+ VHR+ + NI V ++D GLA L+
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 110
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 169
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 83
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 84 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 139
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 100
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 159
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 106
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQV 672
A + YL + VHR+ + N V + D G++ I S +V
Sbjct: 167 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 79
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 80 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 135
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 68 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 123
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 84
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 143
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 91
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 150
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 195
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 80
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 139
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 184
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKR 544
S + P + +++L+ F L+G G G VY+ + + G+L A+K +D
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 545 ASSQQKDDEFLELVNNIDRI-RHANIVELKGYCAEHG------QRLLIYEYCSNGTLQDM 597
+ +++E + +N + + H NI G + Q L+ E+C G++ D+
Sbjct: 59 -VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 598 LHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSD 657
+ + W I + R L +LH Q ++HR+ K N+ V + D
Sbjct: 118 IKNTKGNTLKEEWIAYICREI--LRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 172
Query: 658 CGLA 661
G++
Sbjct: 173 FGVS 176
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 85
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 144
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+ +A+K L S + FLE + +++H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS---PESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+E ++ EY + G+L D L + L + MA A + Y+ + +
Sbjct: 74 SEE-PIYIVTEYMNKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
HR+ +SANI ++D GLA LI
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIE 156
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 77
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 136
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 181
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L Q + + + ++ + + H +I++ KG C + G++ L+ EY
Sbjct: 43 GEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HRN +
Sbjct: 102 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAAR 146
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG 667
N+ V + D GLA + G
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L Q + + + ++ + + H +I++ KG C + G++ L+ EY
Sbjct: 43 GEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HRN +
Sbjct: 102 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAAR 146
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG 667
N+ V + D GLA + G
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 76
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 135
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 180
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ R L++LH C IVHR+ K NI V ++D GLA + S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++HR+ K AN+ V + D GLA +++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQV 672
A + YL + VHR+ + N V + D G++ I S +V
Sbjct: 138 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 103 SSIRVIDLSNNHIGGSI-PSIL---PVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNN 158
+S+ +DLS+N+ G I P++ T+Q +L +N F+G IP +L+ + L + L+
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 159 NLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSL 193
N LSG IP + SL+ L GE+P L
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 105 IRVIDLSNNHIGGSIP-SILPVTMQNFF-LSDNQFSGSIPSSLATLTLLTDMSLNNNLLS 162
+ +++L +N I GSIP + + N LS N+ G IP +++ LT+LT++ L+NN LS
Sbjct: 658 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 163 GEIPDAFQ 170
G IP+ Q
Sbjct: 718 GPIPEMGQ 725
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 102 FSSIRVIDLSNNHIGGSIPSILPV--TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNN 159
S +R + L N + G IP L T++ L N +G IPS L+ T L +SL+NN
Sbjct: 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 500
Query: 160 LLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
L+GEIP L L G +P L + L
Sbjct: 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD--------------------CRSL 540
Query: 220 PLRDLNIENNLFSGPIPEKMLQ 241
DLN NLF+G IP M +
Sbjct: 541 IWLDLNT--NLFNGTIPAAMFK 560
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 SSIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNN 159
+++ I LSNN + G IP + ++N LS+N FSG+IP+ L L + LN N
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 160 LLSGEIPDAFQSLTGLI 176
L +G IP A +G I
Sbjct: 549 LFNGTIPAAMFKQSGKI 565
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S+ +D+S N + G IP + +M F L N SGSIP + L L + L++N
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 161 LSGEIPDAFQSLTGLIXXXXXXXXXXGELP 190
L G IP A +LT L G +P
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 104 SIRVIDLSNNHIGGSIPSILPV---TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S++ + L+ N G IP L T+ LS N F G++P + +LL ++L++N
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 161 LSGEIP-DAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
SGE+P D + GL GELP SL
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS-------------------- 369
Query: 220 PLRDLNIENNLFSGPIPEKMLQIP 243
L L++ +N FSGPI + Q P
Sbjct: 370 -LLTLDLSSNNFSGPILPNLCQNP 392
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 126 TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXX 185
+M +S N SG IP + ++ L ++L +N +SG IPD L GL
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 186 XGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDLPLRDLNIENNLFSGPIPEKMLQIPNF 245
G +P ++ L ++++ NN SGPIPE M Q F
Sbjct: 693 DGRIPQAMSALTM----------------------LTEIDLSNNNLSGPIPE-MGQFETF 729
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 73
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 132
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 177
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ R L++LH C IVHR+ K NI V ++D GLA + S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G G+VY+ +P+G+ + + K+ + + + EF++ + + H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C +L + + +G L + +H E K+N+ + + A+ + YL E
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEE- 135
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+VHR+ + N+ V ++D GLA L+
Sbjct: 136 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLA 197
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G+G G V + +AVK + + + S +DEF + + ++ H +V+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ---- 632
++ ++ EY SNG L + L S + L ++ LE +++C+
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGK-------------GLEPSQLLEMCYDVCEGMAF 119
Query: 633 ---PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+HR+ + N V VSD G+ +
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 84
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 143
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ R L++LH C IVHR+ K NI V ++D GLA + S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQV 672
A + YL + VHR+ + N V + D G++ I S +V
Sbjct: 144 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 167
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLA 190
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++HR+ K AN+ V + D GLA +++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 166
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLA 189
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 163
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLA 186
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++HR+ K AN+ V + D GLA +++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HANIVELK 573
++ G VY AQ + G+ A+K+L ++ ++K+ ++ V + ++ H NIV+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 574 GYCAE-----------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
+C+ + LL+ E C G L + L E + LS +T +++ R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFL-KKMESRGPLSCDTVLKIFYQTCR 147
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
A++++H +PPI+HR+ K N+ + + D G A IS
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLA 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLE--------LV 558
T+ + IG G G+VY+A+ P G +A+K + R + L L+
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGGGGGGGLPISTVREVALL 65
Query: 559 NNIDRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNT 612
++ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAET 121
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ R L++LH C IVHR+ K NI V ++D GLA + S
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ + + +IG+G V A P + +A+K+++ Q DE L+ + + + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 68
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAA-RA 623
NIV + L+ + S G++ D++ + E K+ + + I L
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
LEYLH+ Q +HR+ K+ NI +V ++D G++ +++G
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + ++D GLA
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 159
Query: 639 NFKSANIXXXXXXAVSVSDCGLA 661
+ + N+ + ++D GLA
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLA 182
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + ++D GLA
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ + + +IG+G V A P + +A+K+++ Q DE L+ + + + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 73
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAA-RA 623
NIV + L+ + S G++ D++ + E K+ + + I L
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
LEYLH+ Q +HR+ K+ NI +V ++D G++ +++G
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + ++D GLA
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLA 147
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 70
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A
Sbjct: 71 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAEG 126
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 127 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 166
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS--------DDELKNNLSWNTRIRMALGAA 621
L G C + G L+ I E+C G L L S D K+ L+ I + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ +E+L +HR+ + NI V + D GLA
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + ++ + IG G V A+ + G+ +AVK +DK + + V +
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ H NIV+L L+ EY S G + D L + +K + + R + A
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVS---A 126
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 127 VQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AV+ +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 97
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
EI +P I HR+ KS NI ++D GLA + S +
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AV+ +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMAL 618
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G+ G+V++ +P+G+ + + K+ + S +Q + + I + HA+IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 571 ELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G C G L L+ +Y G+L D + + L + + A+ + YL E
Sbjct: 97 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+VHRN + N+ V V+D G+A L+
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 68
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
EI +P I HR+ KS NI ++D GLA + S +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 68
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
EI +P I HR+ KS NI ++D GLA + S +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDE-----FLELVNNIDRIRHANIVE 571
+G G + +VY L + +L +K K ++ E F V+N ++ H NIV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ E L+ EY TL + + S LS +T I +++ H++
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM- 130
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNL 676
IVHR+ K NI + + D G+A +S S++Q +H L
Sbjct: 131 --RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL 173
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 516 LIGAGMLGSVYRAQLPD--GKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L D GK + AVK L+ R + + +FL + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N V V+D GLA
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 150 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 204
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ ++ + L +A
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 259
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
L LH ++HR+ KS +I V +SD G +S
Sbjct: 260 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 30 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 84
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 139
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
L LH ++HR+ KS +I V +SD G +S
Sbjct: 140 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 179
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G+ G+V++ +P+G+ + + K+ + S +Q + + I + HA+IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 571 ELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G C G L L+ +Y G+L D + + L + + A+ + YL E
Sbjct: 79 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+VHRN + N+ V V+D G+A L+
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 165
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 128
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
L LH ++HR+ KS +I V +SD G +S
Sbjct: 129 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 168
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 77
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
L LH ++HR+ KS +I V +SD G +S
Sbjct: 133 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 172
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 144
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 613 RIRMALGAARALEYL-HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL + C +HR+ + N+ + ++D GLA
Sbjct: 205 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G VY+ L + +A+K L +A ++ EF R++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 92
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML-----HS-------DDELKNNLSWNTRIRMAL 618
L G + +I+ YCS+G L + L HS D +K+ L + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
A +EYL +VH++ + N+ V +SD GL
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYL-HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL + C +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 73 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 127
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 182
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
L LH ++HR+ KS +I V +SD G +S
Sbjct: 183 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 517 IGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++ + D G+++A+KK + L + + +++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSD----DELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ L++EYC + L ++ + L +++W T +A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCH--- 119
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ +HR+ K NI + + D G A L++ S
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G VY+ L + +A+K L +A ++ EF R++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 75
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML-----HS-------DDELKNNLSWNTRIRMAL 618
L G + +I+ YCS+G L + L HS D +K+ L + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
A +EYL +VH++ + N+ V +SD GL
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 28 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 82
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 137
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
L LH ++HR+ KS +I V +SD G +S
Sbjct: 138 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 177
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 74/195 (37%), Gaps = 22/195 (11%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 15 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 67
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 68 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 593 TLQDMLHS------DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
L + L D E L + + A+ + +L +HR+ + N+
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 184
Query: 647 XXXXXAVSVSDCGLA 661
+ D GLA
Sbjct: 185 LTNGHVAKIGDFGLA 199
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 197
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYL-HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL + C +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 90
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 502 ASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNN 560
A Q + ++ IG G V A+ + G+ +A+K +DK + + V
Sbjct: 8 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
+ + H NIV+L LI EY S G + D L + +K + ++ R +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVS- 125
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
A++Y H Q IVHR+ K+ N+ + ++D G + + G
Sbjct: 126 --AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP--DGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
F+ ++G G GSV AQL DG + AVK L + +EFL +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 565 RHANIVELKGYCAEHGQR------LLIYEYCSNGTLQDMLHSDDELKN--NLSWNTRIRM 616
H ++ +L G + ++I + +G L L + +N NL T +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
+ A +EYL +HR+ + N V V+D GL+ I SG
Sbjct: 143 MVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ D L+AVK L + + +KD F + ++H +IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD--FHREAELLTNLQHEHIV 78
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDEL-------KNNLSWNTRIRMALGAA 621
+ G C E ++++EY +G L L H D + L+ + + +A A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQV 672
+ YL VHR+ + N V + D G++ + S +V
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
+Q +++ +IG G G V++A+L + +A+KK+ + + ++ + + +V
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIV------ 89
Query: 565 RHANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL 618
+H N+V+LK + +G + L+ EY + H +LK +
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY-AKLKQTMPMLLIKLYMY 148
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
R+L Y+H I I HR+ K N+ V + D G A ++ +G
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 85
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ +E+L +HR+ + NI V + D GLA
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 87
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 74/195 (37%), Gaps = 22/195 (11%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 75
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 593 TLQDMLHS------DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
L + L D E L + + A+ + +L +HR+ + N+
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 192
Query: 647 XXXXXAVSVSDCGLA 661
+ D GLA
Sbjct: 193 LTNGHVAKIGDFGLA 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKD-DEFLELVNNIDRIRHANI 569
+G G G V+ A+ D L+AVK L + +KD EL+ N+ +H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL---QHEHI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDEL----------KNNLSWNTRIRMA 617
V+ G C + ++++EY +G L L H D + K L + + +A
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQV-SHNL 676
A + YL VHR+ + N V + D G++ + S +V H +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 677 TIMR 680
+R
Sbjct: 197 LPIR 200
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + ++ IG G V A+ + G+ +A+K +DK + + V +
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ H NIV+L LI EY S G + D L + +K + ++ R + A
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVS---A 123
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
++Y H Q IVHR+ K+ N+ + ++D G + + G
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G V A+ + GK +AVK +DK + + V + + H NIV+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
L+ EY S G + D L + +K + + R + A++Y H Q I
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA-RAKFRQIVS---AVQYCH---QKFI 127
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
VHR+ K+ N+ + ++D G + + G+
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 160
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K+A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDLG-- 136
Query: 634 PIVHRNFKSANIXXXX---XXAVSVSDCGLAPLISSGSV 669
IVHR+ K N+ + +SD GL+ + GSV
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+ +L + A+S + + E L+ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMEL-REATSPKANKEILDEAYVMAS 107
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 108 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 163
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
+ YL + +VHR+ + N+ V ++D GLA L+ +
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 198
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG 667
+L Y+H I HR+ K N+ AV + D G A + G
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + H NIV+L L+ EY S G + D L + K + + R
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN 167
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
++Y +F + IG G G V A + GK +AVKK+D R QQ+ + V +
Sbjct: 44 REYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRD 98
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
H N+V++ + ++ E+ G L D++ + ++ + L RA
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRA 153
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
L YLH ++HR+ KS +I + +SD G +S
Sbjct: 154 LSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 173
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV+L + L++E+ LH D + + S T I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 625 EYLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ L C ++HR+ K N+ A+ ++D GLA
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ + K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 126 -SKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV+L + L++E+ LH D + + S T I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 625 EYLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ L C ++HR+ K N+ A+ ++D GLA
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 517 IGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+GAG G V A D L +AVK L A + +K+ EL +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL----------KNNLSWNTRIRMALGA 620
L G C G L+I EYC G L + L + + LS + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
A+ + +L +HR+ + N+ + D GLA
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L A Q + + + ++ + + H +I++ KG C + G L+ EY
Sbjct: 60 GEMVAVKALKADAGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HR+ +
Sbjct: 119 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAAR 163
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG 667
N+ V + D GLA + G
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEG 187
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 31/168 (18%)
Query: 35 VTNPNDVAAINSLYAALGSPV-LPGWVASAGDPCGESWQGVQCNASDIIAIIXXXXXXXX 93
+ NP D A+ + LG+P L W+ + D C +W GV C+
Sbjct: 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTT-DCCNRTWLGVLCDTDT------------- 47
Query: 94 XXXXXXXXFSSIRVIDLSNNHIGGSIPSILPVTMQNF----FL---SDNQFSGSIPSSLA 146
+ RV +L + + P +P ++ N FL N G IP ++A
Sbjct: 48 ---------QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIA 98
Query: 147 TLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLE 194
LT L + + + +SG IPD + L+ G LPPS+
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 104 SIRVIDLSNNHIGGSIP---SILPVTMQNFFLSDNQFSGSIPSSLATLT-LLTDMSLNNN 159
++ +D S N + G++P S LP + N+ SG+IP S + + L T M+++ N
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLP-NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 160 LLSGEIPDAFQSL 172
L+G+IP F +L
Sbjct: 185 RLTGKIPPTFANL 197
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 170
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 517 IGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+GAG G V A D L +AVK L A + +K+ EL +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L+I EYC G L + L + L + +A A + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV---LETDPAFAIANSTASTRDLLHFS 170
Query: 631 CQPP----------IVHRNFKSANIXXXXXXAVSVSDCGLA 661
Q +HR+ + N+ + D GLA
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSV 669
IVHR+ K N+ + +SD GL+ + GSV
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
Y+H + I+HR+ K+AN+ + ++D GLA S SQ
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELV 558
+ S Q F +G G G+VY A+ K + K+ +A ++ + + V
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRM 616
+RH NI+ L GY + + LI EY GT+ L S + + ++ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 120
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
A AL Y H ++HR+ K N+ + ++D G
Sbjct: 121 ----ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQ----LPDGKLLAVKKLDKRASSQQ-KDDEFLELVNNI-DRI 564
F ++G G G V++ + GK+ A+K L K + KD + NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLS--WNTRIRMALGAAR 622
+H IV+L G+ LI EY S G L L + + + + I MALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQV 672
+LH Q I++R+ K NI V ++D GL I G+V+
Sbjct: 136 ---HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F + +G G V A+ GKL AVK + K+A + K+ + + +I+H NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL-KGKESSIENEIAVLRKIKHENI 82
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V L+ L+ + S G L D + + +T IR L A+ YLH
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQVLD---AVYYLHR 138
Query: 630 ICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSV 669
+ IVHR+ K N+ + +SD GL+ + G V
Sbjct: 139 M---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV 178
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 498 SFTIASLQQYTNSFSQENL---IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKD 551
++T+ S + Y + L IG G G V++ P+ +AV K K +S
Sbjct: 376 TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 435
Query: 552 DEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
++FL+ + + H +IV+L G E+ +I E C+ G L+ L K +L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLA 491
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
+ I A + AL YL VHR+ + N+ V + D GL+ + + +
Sbjct: 492 SLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 672 VS 673
S
Sbjct: 549 AS 550
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
VHR+ + N+ V + D GL+ + + + S
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS 170
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 129
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 130 -SKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQ----LPDGKLLAVKKLDKRASSQQ-KDDEFLELVNNI-DRI 564
F ++G G G V++ + GK+ A+K L K + KD + NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLS--WNTRIRMALGAAR 622
+H IV+L G+ LI EY S G L L + + + + I MALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQ 671
+LH Q I++R+ K NI V ++D GL I G+V+
Sbjct: 136 ---HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSV 669
IVHR+ K N+ + +SD GL+ + GSV
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 498 SFTIASLQQYTNSFSQENL---IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKD 551
++T+ S + Y + L IG G G V++ P+ +AV K K +S
Sbjct: 376 TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR 435
Query: 552 DEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
++FL+ + + H +IV+L G E+ +I E C+ G L+ L K +L
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLA 491
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
+ I A + AL YL VHR+ + N+ V + D GL+ + + +
Sbjct: 492 SLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 672 VS 673
S
Sbjct: 549 AS 550
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSV 669
IVHR+ K N+ + +SD GL+ + GSV
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 124
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 125 -SKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY GT+ L S + + ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 137
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
Y+H + I+HR+ K+AN+ + ++D GLA S SQ
Sbjct: 138 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
Y+H + I+HR+ K+AN+ + ++D GLA S SQ
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY GT+ L S + + ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 151
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 152 -SKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY GT+ L S + + ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 501 IASLQQYT-NSFSQENLIGAGMLGSVYRAQLPDGK-LLAVK-----KLDKRASSQQKDDE 553
+ S +Q+T F +G G G+VY A+ K +LA+K +L+K Q E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLS 609
V +RH NI+ L GY + + LI EY GT LQ + D++ +
Sbjct: 63 ----VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--RTAT 116
Query: 610 WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ T + A AL Y H ++HR+ K N+ + ++D G
Sbjct: 117 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY GT+ L S + + ++ T + A AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 152
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I Y S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 501 IASLQQYT-NSFSQENLIGAGMLGSVYRAQLPDGK-LLAVK-----KLDKRASSQQKDDE 553
+ S +Q+T F +G G G+VY A+ K +LA+K +L+K Q E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLS 609
V +RH NI+ L GY + + LI EY GT LQ + D++ +
Sbjct: 63 ----VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--RTAT 116
Query: 610 WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ T + A AL Y H ++HR+ K N+ + ++D G
Sbjct: 117 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 132
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
IVHR+ K N+ V ++D GL+ +++ G+ + S
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 127
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 143 -SKRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 133
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
IVHR+ K N+ V ++D GL+ +++ G+ + S
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 172
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 123
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
IVHR+ K N+ V ++D GL+ +++ G+ + S
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 162
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY GT+ L S + + ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 127
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
IVHR+ K N+ V ++D GL+ +++ G+ + S
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 166
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L + Q + E + + + H +IV+ KG C + G++ L+ EY
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQRE-IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R +G A+ L + +IC+ +HR +
Sbjct: 97 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 141
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG 667
N+ V + D GLA + G
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEG 165
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L + Q + E + + + H +IV+ KG C + G++ L+ EY
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQRE-IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R +G A+ L + +IC+ +HR +
Sbjct: 96 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 140
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG 667
N+ V + D GLA + G
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEG 164
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 122
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 123 -SKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 74/198 (37%), Gaps = 22/198 (11%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 75
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 593 TLQDMLHSDDELKNNLSWNT--RIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
L + L S+N L + L + ++ Q +HR+ +
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 195
Query: 644 NIXXXXXXAVSVSDCGLA 661
N+ + D GLA
Sbjct: 196 NVLLTNGHVAKIGDFGLA 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 31/169 (18%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I Y S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ AR +EYL +HR+ + N+ + ++D GLA
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY G + L S + + ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY G + L S + + ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + ++D G
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV+Q +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
H NIV+L + L++E+ LH D + + S T I + L + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 626 YLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
L C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV+Q +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 9 RKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 59
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ A AL Y HE ++HR+ K N+ + ++D G
Sbjct: 120 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E H D +LK + + + L ++ YL
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-----------HVDQDLKKFMDASALTGIPLPLIKS--YL 112
Query: 628 HEICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++ Q ++HR+ K N+ A+ ++D GLA
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 10 RKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 60
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ A AL Y HE ++HR+ K N+ + ++D G
Sbjct: 121 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 9 RKFTI-------DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 59
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ A AL Y HE ++HR+ K N+ + ++D G
Sbjct: 120 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 8 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 60
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 61 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 593 TLQDMLHSDDE 603
L + L E
Sbjct: 121 DLLNFLRRKAE 131
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
NI AV V D G+A I S SV+Q +
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 162
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
NI AV V D G+A I S SV+Q +
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
NI AV V D G+A I S SV+Q +
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+ +IG G G VY + D A+K L R + Q+ + FL + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 570 VELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ L G G ++ Y +G L + S + N + I L AR +EYL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLA 141
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E VHR+ + N V V+D GLA
Sbjct: 142 E---QKFVHRDLAARNCMLDESFTVKVADFGLA 171
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G +VY+ + + +A +L R ++ + F E + ++H NIV
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 576 CAE--HGQR--LLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHE 629
G++ +L+ E ++GTL+ L ++K SW +I + L++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH- 146
Query: 630 ICQPPIVHRNFKSANIXXXX-XXAVSVSDCGLAPL 663
PPI+HR+ K NI +V + D GLA L
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + +SD GLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 72
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 125
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + +SD GLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 504 LQQYTNSFSQENL-----IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDE 553
LQ T +++L +G G G V R + P GK + AVK L SQ + D+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWN 611
F+ VN + + H N++ L G + ++ E G+L D L H L LS
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-- 124
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
R A+ A + YL +HR+ + N+ V + D GL
Sbjct: 125 ---RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQVS 673
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV Q +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY+A + +A+K++ + + V+ + ++H NI+ELK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS- 100
Query: 576 CAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI--CQ 632
H RL LI+EY N +LK + N + M + + + ++ + C
Sbjct: 101 VIHHNHRLHLIFEYAEN-----------DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 633 P-PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLTIMRAGGVTHRNF 689
+HR+ K N+ +SVSD P++ G + + RA G+ R F
Sbjct: 150 SRRCLHRDLKPQNLL------LSVSDASETPVLKIG-------DFGLARAFGIPIRQF 194
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +N
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--IN 67
Query: 560 NIDRIR---HANIVE-LKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
I +R + NIV L Y G L ++ EY + G+L D++ + ++ R
Sbjct: 68 EILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR- 124
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+ALE+LH ++HRN KS NI +V ++D G I+
Sbjct: 125 ----ECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + +++ G
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 504 LQQYTNSFSQENL-----IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDE 553
LQ T +++L +G G G V R + P GK + AVK L SQ + D+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWN 611
F+ VN + + H N++ L G + ++ E G+L D L H L LS
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-- 124
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
R A+ A + YL +HR+ + N+ V + D GL
Sbjct: 125 ---RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEHGQRL--------LIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
Y+H + I+HR+ K+AN+ + ++D GLA S SQ
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 127
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
++HR+ K N+ + +++ G
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEF 554
+A+ ++T+ + +G G V R Q K++ KKL R D +
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR------DHQK 76
Query: 555 LELVNNIDRI-RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNT 612
LE I R+ +H NIV L +E G L+++ + G L +D++ + + +
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYS 128
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
+ + LE ++ I Q IVHR+ K N+ AV ++D GLA
Sbjct: 129 EADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G G V QL ++ +AVK +D KRA ++ + +N + + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVVK 68
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG 124
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + +SD GLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + +SD GLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
HR+ K N+ + +SD GLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S L+D + + L L A +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
H ++HR+ K N+ A+ ++D GLA
Sbjct: 125 HR-----VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 132
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+HR+ + N+ V + D GL
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ H N+V+ G+ E + L EYCS G L D + D + + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH I I HR+ K N+ + +SD GLA
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+HR+ + N+ V + D GL
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G G V QL ++ +AVK +D KRA ++ + +N + + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVVK 68
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG 124
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S L+D + + L L A +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
H ++HR+ K N+ A+ ++D GLA
Sbjct: 124 HR-----VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 68
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 123
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ +H D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH---------VHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 501 IASLQQYTNSF---SQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ + Q NSF S+ ++G G G V++ + G LA K + R + +E
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKN 135
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN-TRIR 615
++ ++++ HAN+++L +L+ EY G L D + + S+N T +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-------SYNLTELD 188
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA--VSVSDCGLA 661
L + E + + Q I+H + K NI A + + D GLA
Sbjct: 189 TILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 132
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+HR+ + N+ V + D GL
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 70
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 125
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 70
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 125
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+HR+ + N+ V + D GL
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+HR+ + N+ V + D GL
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 536 LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQ 595
+AVK +D + + ++ E+ N + H N+V+ G+ E + L EYCS G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 596 DMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSV 655
D + D + + ++ G YLH I I HR+ K N+ + +
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 656 SDCGLA 661
SD GLA
Sbjct: 146 SDFGLA 151
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL-KG 574
IG G G V A + G+ +AVK +D R QQ+ + V + +H N+VE+ K
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 575 YCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
Y G+ L ++ E+ G L D++ + L+ + +AL YLH
Sbjct: 111 YLV--GEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHA---Q 160
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++HR+ KS +I V +SD G IS
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 192
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINA-MLNHENVVKF 70
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 125
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
I HR+ K N+ + +SD GLA
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+ K+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+ K+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVEL 572
+ +G G G V + G +AVK L++ + S + + N+ RH +I++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
+ ++ EY S G L D + + L S R+ ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR----RLFQQILSGVDYCH---R 134
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
+VHR+ K N+ ++D GL+ ++S G + S
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS 175
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S + M + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFM---------DASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 515 NLIGAGMLGSVYRA-QLPDG---KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G G+VY+ +PDG K+ K+ + +S + + E L+ + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C +L + + G L D + E + L + + A+ + YL ++
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVR---ENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI 664
+VHR+ + N+ V ++D GLA L+
Sbjct: 139 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S + M + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFM---------DASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLA 661
C ++HR+ K N+ A+ ++D GLA
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 511 FSQENL-----IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
F++E L +G G G V +A + P + +AVK L + A++ + EL
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKI 83
Query: 560 NIDRIRHANIVELKGYCAEHGQRLL-IYEYCSNGTLQDMLHSDDEL 604
H N+V L G C + G L+ I EYC G L + L S +L
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F ++G+G V+ Q GKL A+K + K S +D + + +I+H
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK--SPAFRDSSLENEIAVLKKIKHE 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV L+ L+ + S G L D + + + + I+ L A + YL
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVK---YL 122
Query: 628 HEICQPPIVHRNFKSANIXXXX---XXAVSVSDCGLAPLISSGSVS 670
HE IVHR+ K N+ + ++D GL+ + +G +S
Sbjct: 123 HE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P T Q +L DNQ + P LT LT + L+NN L+ F LT L
Sbjct: 22 ASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL 80
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 87/218 (39%), Gaps = 46/218 (21%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+++ F + LIG+G G V++A+ DGK ++++ +++ V + +
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE------VKALAK 61
Query: 564 IRHANIVELKG--------------------YCAEHGQR---------LLIYEYCSNGTL 594
+ H NIV G Y E+ + + E+C GTL
Sbjct: 62 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 595 QDMLHSD--DELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA 652
+ + ++L L+ + + + ++Y+H ++HR+ K +NI
Sbjct: 122 EQWIEKRRGEKLDKVLA----LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQ 174
Query: 653 VSVSDCGLAP-LISSGSVSQVSHNLTIMRAGGVTHRNF 689
V + D GL L + G ++ L M ++ +++
Sbjct: 175 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDD---EFLELVNNIDRIRH 566
+ + + +G G +VY+A+ + +++A+KK+ S+ KD L + + + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY 626
NI+ L L++++ T +++ D+ L S + + M L + LEY
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPS-HIKAYM-LMTLQGLEY 127
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLTIMR 680
LH Q I+HR+ K N+ + ++D GLA S GS ++ + + R
Sbjct: 128 LH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTR 176
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G+++AVK++ +SQ++ ++L ++ + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 175
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K +N+ V + D G++
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 511 FSQENL-----IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
F+ E+L IG G GSV + P G+++AVK++ R++ +K+ + +L+ ++D +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQK--QLLMDLDVV 74
Query: 565 RHAN----IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
++ IV+ G G + E S + + L + + ++ L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+AL +L E + I+HR+ K +NI + + D G++
Sbjct: 135 VKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 517 IGAGMLGSVY--RAQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G V QL G +AVK L++ + S + + N+ RH +I++L
Sbjct: 19 LGVGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ EY S G L D + ++ R R+ A++Y H +
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEAR-RLFQQILSAVDYCH---RH 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
+VHR+ K N+ ++D GL+ ++S G + S
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 16/174 (9%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL---- 557
S + ++ + ++G G+ V R P K AVK +D +E EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 558 VNNIDRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
+ +D +R H NI++LK + L+++ G L D L K LS
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKET 126
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
++ + LH++ IVHR+ K NI + ++D G + + G
Sbjct: 127 RKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 177
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL---- 557
S + ++ + ++G G+ V R P K AVK +D +E EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 558 VNNIDRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
+ +D +R H NI++LK + L+++ G L D L K LS
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKET 126
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
++ + LH++ IVHR+ K NI + ++D G + + G
Sbjct: 127 RKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 558 VNNIDRIRHANIVELKG--YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIR 615
+ + R+RH N+++L Y E + ++ EYC G +Q+ML S E + +
Sbjct: 57 IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYF 115
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
L LEYLH IVH++ K N+ + +S G+A
Sbjct: 116 CQL--IDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 16/171 (9%)
Query: 507 YTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL----VNNI 561
+ ++ + ++G G+ V R P K AVK +D +E EL + +
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 562 DRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMA 617
D +R H NI++LK + L+++ G L D L K LS ++
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIM 117
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ LH++ IVHR+ K NI + ++D G + + G
Sbjct: 118 RALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 509 NSFSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEF 554
++F QE++ +G+G V + Q GK A K + KR S + +E
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 555 LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
VN + IRH NI+ L +LI E S G L D L K +L+ +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEAT 118
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ + YLH I H + K NI + + D G+A I +G+
Sbjct: 119 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 523 GSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC----AE 578
G +++ + G + VK L R S +K +F E + H N++ + G C A
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 579 HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
H LI + G+L ++LH + S ++ AL AR + +LH + P++ R
Sbjct: 83 HPT--LITHWMPYGSLYNVLHEGTNFVVDQS--QAVKFALDMARGMAFLHTL--EPLIPR 136
Query: 639 ---NFKSANIXXXXXXAVSVSDCGLA 661
N +S I +S++D +
Sbjct: 137 HALNSRSVMIDEDMTARISMADVKFS 162
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G+++AVK++ +SQ++ ++L ++ + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 131
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K +N+ V + D G++
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLELVNNIDRIRHANIVE 571
+G+G V + Q GK A K + KR S + +E VN + IRH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L +LI E S G L D L K +L+ + + + YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 125
Query: 632 QPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
I H + K NI + + D G+A I +G+
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I ++ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKLNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 158 EE---NHFIHRDIAARN 171
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 30/185 (16%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q N E ++G G G+V G+ +AV KR D +E+ +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAV----KRMLIDFCDIALMEIKLLTESD 66
Query: 565 RHANIVELKGYCAEHGQRLLI--YEYCSNGTLQDMLH----SDDELKNNLSWNTRIRMAL 618
H N++ + YC+E R L E C N LQD++ SD+ LK +N I +
Sbjct: 67 DHPNVI--RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP-ISLLR 122
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS-------------VSDCGLAPLIS 665
A + +LH + I+HR+ K NI + +SD GL +
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 666 SGSVS 670
SG S
Sbjct: 180 SGQSS 184
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I ++ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKLNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 172 EE---NHFIHRDIAARN 185
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 517 IGAGMLGSVY--RAQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G V QL G +AVK L++ + S + + N+ RH +I++L
Sbjct: 19 LGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ EY S G L D + ++ R R+ A++Y H +
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEAR-RLFQQILSAVDYCH---RH 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+VHR+ K N+ ++D GL+ ++S G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G VY + L + +A+K++ +R S + E + ++H NIV+ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ--PLHEEIALHKHLKHKNIVQYLG 72
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSD-DELKNN---LSWNTRIRMALGAARALEYLHEI 630
+E+G + E G+L +L S LK+N + + T+ + L+YLH+
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAV-SVSDCG 659
IVHR+ K N+ V +SD G
Sbjct: 127 --NQIVHRDIKGDNVLINTYSGVLKISDFG 154
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQ-YTNSFSQENLIGAGMLGSVYRAQLPDGKLLA 537
E K ++ K +R I + +Q N E ++G G G+V G+ +A
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVA 61
Query: 538 VKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLI--YEYCSNGTLQ 595
V KR D +E+ + H N++ + YC+E R L E C N LQ
Sbjct: 62 V----KRMLIDFCDIALMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELC-NLNLQ 114
Query: 596 DMLH----SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXX 651
D++ SD+ LK +N I + A + +LH + I+HR+ K NI
Sbjct: 115 DLVESKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSS 170
Query: 652 AVS-------------VSDCGLAPLISSG 667
+ +SD GL + SG
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSG 199
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKR--ASSQQKDDEFLELVNNIDRIRHA 567
+ IG G V A + G+++A+K +DK S + +E + N+ RH
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL---RHQ 68
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+I +L + ++ EYC G L D + S D L TR+ A+ Y+
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRVVFR-QIVSAVAYV 124
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
H HR+ K N+ + + D GL
Sbjct: 125 H---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G VY + L + +A+K++ +R S + E + ++H NIV+ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ--PLHEEIALHKHLKHKNIVQYLG 86
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSD-DELKNN---LSWNTRIRMALGAARALEYLHEI 630
+E+G + E G+L +L S LK+N + + T+ + L+YLH+
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD- 140
Query: 631 CQPPIVHRNFKSANIXXXXXXAV-SVSDCG 659
IVHR+ K N+ V +SD G
Sbjct: 141 --NQIVHRDIKGDNVLINTYSGVLKISDFG 168
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 107 VIDLSNNHIGGSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIP 166
+D S + S+P+ +P T Q +L DNQ + P LT LT + L+NN L+
Sbjct: 21 TVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPA 79
Query: 167 DAFQSLTGL 175
F LT L
Sbjct: 80 GVFDKLTQL 88
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQ-YTNSFSQENLIGAGMLGSVYRAQLPDGKLLA 537
E K ++ K +R I + +Q N E ++G G G+V G+ +A
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVA 61
Query: 538 VKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLI--YEYCSNGTLQ 595
V KR D +E+ + H N++ + YC+E R L E C N LQ
Sbjct: 62 V----KRMLIDFCDIALMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELC-NLNLQ 114
Query: 596 DMLH----SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXX 651
D++ SD+ LK +N I + A + +LH + I+HR+ K NI
Sbjct: 115 DLVESKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSS 170
Query: 652 AVS-------------VSDCGLAPLISSG 667
+ +SD GL + SG
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSG 199
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 517 IGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G+V++A+ + +++A+K++ + L + + ++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
+ L++E+C QD+ D +L + L + H +
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K N+ + ++D GLA
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 96
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 157 EE---NHFIHRDIAARN 170
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 88
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 149 EEN---HFIHRDIAARN 162
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 158 EE---NHFIHRDIAARN 171
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 96
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 157 EE---NHFIHRDIAARN 170
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 137
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 198 EE---NHFIHRDIAARN 211
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P T Q +L DN+ + P LT LT + L+NN L+ F LT L
Sbjct: 22 ASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL 80
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 158 EE---NHFIHRDIAARN 171
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML 598
H NIV L G C G L+I EYC G L + L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 6/175 (3%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G+G G V+ + L V K + SQ ++ + + + H NI+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ ++ E C G L + + S LS + AL Y H +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 637 HRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQVSHNLTIMRAGGVTHRN 688
H++ K NI + + D GLA L S S + + A V R+
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD 201
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 30/182 (16%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q N E ++G G G+V G+ +AV KR D +E+ +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAV----KRMLIDFCDIALMEIKLLTESD 66
Query: 565 RHANIVELKGYCAEHGQRLLI--YEYCSNGTLQDMLH----SDDELKNNLSWNTRIRMAL 618
H N++ + YC+E R L E C N LQD++ SD+ LK +N I +
Sbjct: 67 DHPNVI--RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP-ISLLR 122
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS-------------VSDCGLAPLIS 665
A + +LH + I+HR+ K NI + +SD GL +
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 666 SG 667
SG
Sbjct: 180 SG 181
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 172 EE---NHFIHRDIAARN 185
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 517 IGAGMLGSVYRAQ-LPDG-KLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ L +G + +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+LH +VHR+ K NI + ++D GLA + S
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 174 EE---NHFIHRDIAARN 187
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 517 IGAGMLGSVYRAQ-LPDG-KLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ L +G + +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+LH +VHR+ K NI + ++D GLA + S
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 114
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 175 EE---NHFIHRDIAARN 188
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML 598
H NIV L G C G L+I EYC G L + L
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + +G G V R ++P G+ A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV L +E G L+++ + G L +D++ + + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
E ++ IVHR+ K N+ AV ++D GLA
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 103
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 164 EE---NHFIHRDIAARN 177
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML 598
H NIV L G C G L+I EYC G L + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 517 IGAGMLGSVYRAQ-LPDG-KLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ L +G + +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
+LH +VHR+ K NI + ++D GLA + S
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML 598
H NIV L G C G L+I EYC G L + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + +G G V R ++P G+ A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV L +E G L+++ + G L +D++ + + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
E ++ IVHR+ K N+ AV ++D GLA
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML 598
H NIV L G C G L+I EYC G L + L
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 136
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKR--ASSQQ--KDDEFLELVNNIDRIRHANIVE 571
+G+G V + Q GK A K + KR SS++ +E VN + IRH NI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L +LI E S G L D L K +L+ + + + YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 146
Query: 632 QPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
I H + K NI + + D G+A I +G+
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALI-ISKFNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 172 EE---NHFIHRDIAARN 185
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 523 GSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC----AE 578
G +++ + G + VK L R S +K +F E + H N++ + G C A
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 579 HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
H LI + G+L ++LH + S ++ AL AR +LH + P++ R
Sbjct: 83 HPT--LITHWXPYGSLYNVLHEGTNFVVDQS--QAVKFALDXARGXAFLHTL--EPLIPR 136
Query: 639 ---NFKSANIXXXXXXAVSVSDCGLA 661
N +S I +S +D +
Sbjct: 137 HALNSRSVXIDEDXTARISXADVKFS 162
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 123
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 628 HEICQPPIVHRNFKSAN 644
E +HR+ + N
Sbjct: 184 EE---NHFIHRDIAARN 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 509 NSFSQENLIGAGMLGSVYR--AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
++ + + +G G +VY+ ++L D L+A+K++ + + + V+ + ++H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEI-RLEHEEGAPCTAIREVSLLKDLKH 59
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY 626
ANIV L L++EY +D+ D+ N ++ + R L Y
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
H + ++HR+ K N+ + ++D GLA
Sbjct: 116 CH---RQKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++T + +G G V R ++ G+ A ++ + S +D + LE I R+
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRL 66
Query: 565 -RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAAR 622
+H NIV L +E G LI++ + G L +D++ + + + S + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ--------Q 118
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
LE + Q +VHRN K N+ AV ++D GLA
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + IG G V R +L G A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H+NIV L +E G L+++ + G L +D++ + + + S + + L
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ--------QIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
E + Q +VHR+ K N+ AV ++D GLA
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 22/176 (12%)
Query: 489 TAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQ 548
+ P R FTI + F +G G G+VY A+ + K+ ++ +
Sbjct: 10 SGTPDILTRHFTI-------DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIE 62
Query: 549 QKDDEFLELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++ E +L I+ + H NI+ L Y + + LI EY G L EL+
Sbjct: 63 KEGVEH-QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELY------KELQ 115
Query: 606 NNLSWNTRIRMAL--GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ +++ + + A AL Y H ++HR+ K N+ + ++D G
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
AA + L + +V+R+ K ANI V +SD GLA
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 517 IGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G+V++A+ + +++A+K++ + L + + ++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
+ L++E+C QD+ D +L + L + H +
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K N+ + +++ GLA
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 248 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 294
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
AA + L + +V+R+ K ANI V +SD GLA
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V + Q L+ +KL ++ + + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ R L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG----KVSIAVLRGLAYLR 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E Q I+HR+ K +NI + + D G++
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
AA + L + +V+R+ K ANI V +SD GLA
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
AA + L + +V+R+ K ANI V +SD GLA
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 517 IGAGMLGSV-----YRAQLPDGKLLAVKKLDKRASSQ---QKDDEFLELVNNIDRIRHAN 568
+G G G V Y+ Q ++L K++ +++ +L+L +RH +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL------LRHPH 70
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
I++L +++ EY + G L D + K ++ + R A+EY H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH 125
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVS 673
+ IVHR+ K N+ V ++D GL+ +++ G+ + S
Sbjct: 126 ---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS 167
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 517 IGAGMLGSVYRA---------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+G G +++ QL + ++L +K LDK + + + F E + + ++ H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDK--AHRNYSESFFEAASMMSKLSHK 72
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G C + +L+ E+ G+L L + N L W + L AA +
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAAA-----M 126
Query: 628 HEICQPPIVHRNFKSANI 645
H + + ++H N + NI
Sbjct: 127 HFLEENTLIHGNVCAKNI 144
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
++ F Q +G G +VY+ G +A+K++ K S + + ++ + ++H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKH 62
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN----LSWNTRIRMALGAAR 622
NIV L + L++E+ N + M D N L N +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
L + HE I+HR+ K N+ + + D GLA
Sbjct: 120 GLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G++ AVK++ +SQ++ +L + + V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 158
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLA 661
+HR+ K +N+ V D G++
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-RHANIVELKG 574
+G G V R ++ G+ A K ++ + S +D + LE I R+ +H NIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA-RDHQKLEREARICRLLKHPNIVRLHD 88
Query: 575 YCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+E G LI++ + G L +D++ + + + + + LE + Q
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVARE--------YYSEADASHCIQQILEAVLHCHQM 140
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
+VHR+ K N+ AV ++D GLA
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 515 NLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G +V+R + G L A+K + + + D + E + ++ H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
E R +LI E+C G+L +L E +N + + ++ +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 632 QPPIVHRNFKSANI 645
+ IVHRN K NI
Sbjct: 130 ENGIVHRNIKPGNI 143
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 83
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 138
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH + +HR+ K+AN+ V ++D G+A
Sbjct: 139 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 78
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 133
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH + +HR+ K+AN+ V ++D G+A
Sbjct: 134 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 63
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 118
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH + +HR+ K+AN+ V ++D G+A
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 515 NLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G +V+R + G L A+K + + + D + E + ++ H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKN--NLSWNTRIRMALGAARALEYLHE 629
E R +LI E+C G+L +L + +R +G L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---- 129
Query: 630 ICQPPIVHRNFKSANI 645
+ IVHRN K NI
Sbjct: 130 --ENGIVHRNIKPGNI 143
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+++ ++LIG G G VY A + K +A+KK+++ L + ++R++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 568 NIVELKGYCAEHG----QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I+ L L I ++ L+ + + L + LG
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE--- 144
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNL 676
+++HE I+HR+ K AN +V + D GLA I+S + ++L
Sbjct: 145 -KFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 63
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 118
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
YLH + +HR+ K+AN+ V ++D G+A
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLL-AVKKLDKRASSQQKDDEFLELV 558
T + QY ++ EN IG G G V A ++ A KK+ K + D F + +
Sbjct: 3 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEI 57
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMA 617
+ + H NI+ L ++ L+ E C+ G L + ++H K + R+
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIM 112
Query: 618 LGAARALEYLHEICQPPIVHRNFKSAN---IXXXXXXAVSVSDCGLAPLISSGSV 669
A+ Y H++ + HR+ K N + + + D GLA G +
Sbjct: 113 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F++ + IG G G VY+ K ++A+K +D + + +D E + + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCDSPYI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
G + + +I EY G+ D+L + ++ T +R L + L+YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA--TILREIL---KGLDYLHS 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ +HR+ K+AN+ V ++D G+A
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLL-AVKKLDKRASSQQKDDEFLELV 558
T + QY ++ EN IG G G V A ++ A KK+ K + D F + +
Sbjct: 20 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEI 74
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMA 617
+ + H NI+ L ++ L+ E C+ G L + ++H K + R+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIM 129
Query: 618 LGAARALEYLHEICQPPIVHRNFKSAN---IXXXXXXAVSVSDCGLAPLISSGSV 669
A+ Y H++ + HR+ K N + + + D GLA G +
Sbjct: 130 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q +++A+K +D + + +D E + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQ----QVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 79
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMALGAARA 623
+ + + G + + +I EY G+ D+L + DE + T ++ L +
Sbjct: 80 SSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA----TMLKEIL---KG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
L+YLH + +HR+ K+AN+ V ++D G+A
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 513 QENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ +G+G G+V Y K +AVK L A+ DE L N + ++ + I
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V + G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE 487
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N+ +SD GL+
Sbjct: 488 ---SNFVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 517 IGAGMLGSVYRA---------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+G G +++ QL + ++L +K LDK + + + F E + + ++ H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDK--AHRNYSESFFEAASMMSKLSHK 72
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G C + +L+ E+ G+L L + KN ++ ++ +A A A+ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAWAMHFL 129
Query: 628 HEICQPPIVHRNFKSANI 645
E ++H N + NI
Sbjct: 130 EE---NTLIHGNVCAKNI 144
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 513 QENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ +G+G G+V Y K +AVK L A+ DE L N + ++ + I
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V + G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE 488
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N+ +SD GL+
Sbjct: 489 ---SNFVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 183
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 184 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 119 IPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
IP+ LP T+ L N P + + L + L+NN +S PDAFQ L L
Sbjct: 26 IPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 119 IPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
IP+ LP T+ L N P + + L + L+NN +S PDAFQ L L
Sbjct: 26 IPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELV 558
F + + ++++++ + +G G V R L K+ +D + LE
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 559 NNIDR-IRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRM 616
I R ++H NIV L E L+++ + G L +D++ E + + I+
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQ 136
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLA 661
L ++ Y H IVHRN K N+ AV ++D GLA
Sbjct: 137 IL---ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 517 IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFL-ELVNNIDRIRHANIVELKG 574
+G G G V+R + G A K + + + D E + + + + +RH +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + ++IYE+ S G L + + + N +S + + + L ++HE
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENN--- 275
Query: 635 IVHRNFKSANI 645
VH + K NI
Sbjct: 276 YVHLDLKPENI 286
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 22/173 (12%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDK---------------RASSQQK 550
+Y N + + G + + D K A+KK +K + S + K
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSK 86
Query: 551 DDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSW 610
D+F + I I++ + +G + + +IYEY N ++ L N +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 611 NTRIRMALGAAR----ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
I++ + + Y+H + I HR+ K +NI V +SD G
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 124
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ +SD GL+ + +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ +SD GL+ + +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 517 IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFL-ELVNNIDRIRHANIVELKG 574
+G G G V+R + G A K + + + D E + + + + +RH +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + ++IYE+ S G L + + + N +S + + + L ++HE
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENN--- 169
Query: 635 IVHRNFKSANI 645
VH + K NI
Sbjct: 170 YVHLDLKPENI 180
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ + F + +G G G V + + G A+K LDK+ + K+ +E N RI
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRIL 95
Query: 566 HA----NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
A +V+L+ ++ ++ EY G + L + ++ L
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL--- 152
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
EYLH + +++R+ K N+ + V+D GLA +
Sbjct: 153 -TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK 192
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ + F + +G G G V + + G A+K LDK+ + K+ +E N RI
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRIL 95
Query: 566 HA----NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
A +V+L+ ++ ++ EY G + L + ++ L
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL--- 152
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
EYLH + +++R+ K N+ + V+D GLA +
Sbjct: 153 -TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK 192
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 126
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ +SD GL+ + +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 144
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N+ +SD GL+
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 124
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ +SD GL+ + +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 157
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
VHR+ + N+ +SD GL+ + +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 146
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N+ +SD GL+
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 146
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHR+ + N+ +SD GL+
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 148
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 12/186 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+++ ++LIG G G VY A + K +A+KK+++ L + ++R++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 568 NIVELKGYCAEHG----QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I+ L L I ++ L+ + + L + LG
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE--- 142
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNLTIMRAGG 683
++HE I+HR+ K AN +V V D GLA I+S + + ++L G
Sbjct: 143 -NFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 684 VTHRNF 689
++N
Sbjct: 199 PHNKNL 204
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
+Y F +G G G V+ A+ D A+K++ + + + ++ + V + ++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKL 60
Query: 565 RHANIVE-----LKGYCAEHGQ----RLLIY---EYCSNGTLQDMLHSDDELKNNLSWNT 612
H IV L+ E Q ++ +Y + C L+D ++ ++ +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER-ERSV 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ + L A A+E+LH ++HR+ K +NI V V D GL
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 38/178 (21%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYE-----YCSNGTLQDMLH--------SDDELKNNLSW 610
+H NI+ + QR +E Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 611 NTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
RA++ LH ++HR+ K +N+ + V D GLA +I +
Sbjct: 117 -----FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKL-DKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
+G G G V+++ G+++AVKK+ D +S F E++ + H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 575 YCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
R L+++Y L ++ + N L + + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETD-LHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQVSHNL 676
++HR+ K +NI V V+D GL+ S ++ +V++N+
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSR--SFVNIRRVTNNI 169
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 140
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
E + I+HR+ K +NI + + D G++
Sbjct: 141 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 38/178 (21%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYE-----YCSNGTLQDMLH--------SDDELKNNLSW 610
+H NI+ + QR +E Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 611 NTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
RA++ LH ++HR+ K +N+ + V D GLA +I +
Sbjct: 117 -----FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 38/178 (21%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYE-----YCSNGTLQDMLH--------SDDELKNNLSW 610
+H NI+ + QR +E Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 611 NTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
RA++ LH ++HR+ K +N+ + V D GLA +I +
Sbjct: 117 -----FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P Q +L DNQ + P +L L ++ L +N L F SLT L
Sbjct: 32 ASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 120
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 118
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 19/176 (10%)
Query: 502 ASLQQYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNN 560
A+ +++ + +++IG G+ V R G AVK ++ ++++ E LE V
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME--VTAERLSPEQLEEVRE 144
Query: 561 IDRIR---------HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
R H +I+ L L+++ G L D L K LS
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEK 200
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG 667
+ A+ +LH IVHR+ K NI + +SD G + + G
Sbjct: 201 ETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANIXXXXXXA---VSVSDCGLA 661
IVHR+ K NI + + D GL+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 514 ENL--IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
ENL +G+G G V++ + G ++AVK++ + + ++ ++L + IV
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+ G + + E GT + L ++ + +M + +AL YL E
Sbjct: 88 QCFGTFITNTDVFIAMELM--GTCAEKLKK--RMQGPIPERILGKMTVAIVKALYYLKE- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+ ++HR+ K +NI + + D G++
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 116
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
+ Y H IVHRN K N+ AV ++D GLA
Sbjct: 117 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 117
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
+ Y H IVHRN K N+ AV ++D GLA
Sbjct: 118 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 117
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLA 661
+ Y H IVHRN K N+ AV ++D GLA
Sbjct: 118 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
Q I++R+ K N+ V +SD GLA + +G
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSG 163
SI V++LS+N + GS+ LP ++ L +N+ SIP + L L ++++ +N L
Sbjct: 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS 487
Query: 164 EIPD-AFQSLTGL 175
+PD F LT L
Sbjct: 488 -VPDGVFDRLTSL 499
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
Q I++R+ K N+ V +SD GLA + +G
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
Q I++R+ K N+ V +SD GLA + +G
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P T Q L NQ + P +LT LT ++L N L+ F LT L
Sbjct: 32 ASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKL 90
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
Q I++R+ K N+ V +SD GLA + +G
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 140
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 506 QYTNSFSQENLIGAGMLGSVY--RAQLPDG--KLLAVKKLDKRASSQQKDDEF--LELVN 559
Q +N F E+ IG G SVY AQL G + +A+K L + + E L +
Sbjct: 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAG 77
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLI-YEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL 618
D N++ +K YC ++I Y + + D+L N+LS+ L
Sbjct: 78 GQD-----NVMGVK-YCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYML 124
Query: 619 GAARALEYLHEICQPPIVHRNFKSAN-IXXXXXXAVSVSDCGLA 661
+AL+ +H+ IVHR+ K +N + ++ D GLA
Sbjct: 125 NLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 160
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 65/180 (36%), Gaps = 33/180 (18%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLEL------------- 557
F QEN+ G +L GK VKK ++++ Q +F++
Sbjct: 4 FRQENVDDYYDTGE----ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 558 -----VNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEE 115
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 116 ATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANI 645
IVHR+ K NI
Sbjct: 142 IVHRDLKPENI 152
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 158
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G+ V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANI 645
IVHR+ K NI
Sbjct: 142 IVHRDLKPENI 152
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 9/148 (6%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 134
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLA 661
++HR+ K N+ V + D GLA
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ F E + G G G+V + G +A+KK+ + + ++ L+++ ++ + H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---LQIMQDLAVLHHP 79
Query: 568 NIVELKGYCAEHGQR 582
NIV+L+ Y G+R
Sbjct: 80 NIVQLQSYFYTLGER 94
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 621 ARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
ARA+ Y EIC + IV+R+ K NI + +SD GLA + G
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 621 ARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
ARA+ Y EIC + IV+R+ K NI + +SD GLA + G
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P Q +L++NQ + P L L + N+N L+ F LT L
Sbjct: 25 ASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 537 AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQD 596
A+K + K + S + + LE V + + H NI++L + + L+ E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF- 124
Query: 597 MLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---V 653
DE+ + + +N + A+ + L + + + IVHR+ K N+ +
Sbjct: 125 -----DEIIHRMKFN-EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178
Query: 654 SVSDCGLAPLI 664
+ D GL+ +
Sbjct: 179 KIVDFGLSAVF 189
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 517 IGAGMLGSVYRA---QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G VY+A D K A+K+++ S E + + ++H N++ L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE----IALLRELKHPNVISLQ 84
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY----- 626
H R L+++Y + D+ H + + + +++ G ++L Y
Sbjct: 85 KVFLSHADRKVWLLFDYAEH----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 627 LHEICQPPIVHRNFKSANIXXX----XXXAVSVSDCGLAPLISS 666
+H + ++HR+ K ANI V ++D G A L +S
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 12/155 (7%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++Q IG G G V A K +A+KK+ Q L + + R RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRTLREIQILLRFRHENV 103
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAARALEY 626
+ ++ + Y +QD++ +D LK+ N I L R L+Y
Sbjct: 104 IGIRDILRASTLEAMRDVY----IVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+H ++HR+ K +N+ + + D GLA
Sbjct: 160 IHSAN---VLHRDLKPSNLLINTTCDLKICDFGLA 191
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 517 IGAGMLGSVYRA--QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
+G G GSV + ++ ++ K+ K+ + + +E + + ++ + IV L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
C +L+ E G L L E + + + + ++YL E
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KN 456
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLA 661
VHRN + N+ +SD GL+
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLS 483
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSG 667
+ YLH + I H + K NI + + D GLA I G
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSG 667
+ YLH + I H + K NI + + D GLA I G
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 17/173 (9%)
Query: 496 ARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF 554
ARSF + + + IG G G V A+ G+ +A+KK+
Sbjct: 44 ARSFDVTF--DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 555 LELVNNIDRIRHANIVELKGY---CAEHGQRLLIYEYCS--NGTLQDMLHSDDELKNNLS 609
L + + +H NI+ +K +G+ +Y L ++HS L
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-- 159
Query: 610 WNTRIRMAL-GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+R L R L+Y+H ++HR+ K +N+ + + D G+A
Sbjct: 160 ---HVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 517 IGAGMLG--SVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
IG+G G + R +L +L+AVK +++ A+ + E++N+ +RH NIV K
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQR--EIINH-RSLRHPNIVRFKE 83
Query: 575 YCAEHGQRLLIYEYCSNGTLQDML 598
+I EY S G L + +
Sbjct: 84 VILTPTHLAIIMEYASGGELYERI 107
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 17/173 (9%)
Query: 496 ARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF 554
ARSF + + + IG G G V A+ G+ +A+KK+
Sbjct: 43 ARSFDVTF--DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 555 LELVNNIDRIRHANIVELKGY---CAEHGQRLLIYEYCS--NGTLQDMLHSDDELKNNLS 609
L + + +H NI+ +K +G+ +Y L ++HS L
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-- 158
Query: 610 WNTRIRMAL-GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA 661
+R L R L+Y+H ++HR+ K +N+ + + D G+A
Sbjct: 159 ---HVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,742,324
Number of Sequences: 62578
Number of extensions: 526513
Number of successful extensions: 2403
Number of sequences better than 100.0: 676
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 1798
Number of HSP's gapped (non-prelim): 715
length of query: 689
length of database: 14,973,337
effective HSP length: 105
effective length of query: 584
effective length of database: 8,402,647
effective search space: 4907145848
effective search space used: 4907145848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)