Query 005590
Match_columns 689
No_of_seqs 405 out of 2988
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 01:51:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005590.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005590hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0696 Serine/threonine prote 100.0 1.7E-70 3.7E-75 567.7 17.6 410 216-687 155-611 (683)
2 KOG0667 Dual-specificity tyros 100.0 7.3E-56 1.6E-60 487.2 26.3 320 364-687 169-507 (586)
3 KOG0615 Serine/threonine prote 100.0 1.3E-49 2.8E-54 414.9 16.7 259 377-687 168-442 (475)
4 KOG0661 MAPK related serine/th 100.0 8.2E-50 1.8E-54 422.6 14.2 283 378-688 7-297 (538)
5 KOG0575 Polo-like serine/threo 100.0 2.6E-48 5.5E-53 423.4 25.6 251 381-689 18-276 (592)
6 KOG0593 Predicted protein kina 100.0 5.7E-48 1.2E-52 388.6 14.7 279 381-686 2-288 (396)
7 KOG0659 Cdk activating kinase 100.0 2.8E-47 6.1E-52 378.2 18.8 278 381-687 2-286 (318)
8 KOG0581 Mitogen-activated prot 100.0 3.8E-47 8.3E-52 394.2 20.0 253 379-687 77-340 (364)
9 KOG0600 Cdc2-related protein k 100.0 1.8E-46 3.9E-51 399.9 20.0 281 377-685 113-403 (560)
10 KOG0660 Mitogen-activated prot 100.0 8.8E-46 1.9E-50 382.6 21.1 280 379-687 20-315 (359)
11 KOG0663 Protein kinase PITSLRE 100.0 5.1E-46 1.1E-50 378.9 18.8 282 379-687 74-366 (419)
12 KOG0598 Ribosomal protein S6 k 100.0 1.2E-45 2.6E-50 383.0 21.3 251 380-687 24-286 (357)
13 KOG0592 3-phosphoinositide-dep 100.0 8.5E-45 1.9E-49 389.8 21.6 250 381-687 73-343 (604)
14 KOG0671 LAMMER dual specificit 100.0 4.1E-45 8.9E-50 378.7 15.2 314 369-688 77-412 (415)
15 PTZ00284 protein kinase; Provi 100.0 3.2E-43 6.9E-48 395.9 31.0 299 380-688 128-444 (467)
16 KOG0616 cAMP-dependent protein 100.0 3.9E-44 8.4E-49 360.4 20.8 249 381-687 44-302 (355)
17 KOG0658 Glycogen synthase kina 100.0 3.4E-44 7.3E-49 371.5 17.9 277 381-687 24-311 (364)
18 KOG0670 U4/U6-associated splic 100.0 5.5E-45 1.2E-49 387.4 11.5 317 368-688 419-752 (752)
19 KOG0583 Serine/threonine prote 100.0 4.7E-43 1E-47 380.9 26.6 255 378-687 14-280 (370)
20 KOG1290 Serine/threonine prote 100.0 4.9E-43 1.1E-47 371.5 25.4 319 360-687 56-555 (590)
21 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-42 3E-47 365.3 28.1 276 381-685 5-288 (288)
22 KOG0594 Protein kinase PCTAIRE 100.0 2.2E-43 4.8E-48 365.8 20.3 284 381-687 11-307 (323)
23 KOG0694 Serine/threonine prote 100.0 3.6E-43 7.7E-48 387.0 22.4 253 378-687 365-629 (694)
24 KOG0595 Serine/threonine-prote 100.0 1E-42 2.2E-47 363.9 23.1 255 380-687 9-273 (429)
25 KOG0605 NDR and related serine 100.0 7.5E-43 1.6E-47 375.3 22.6 253 380-687 140-450 (550)
26 KOG0588 Serine/threonine prote 100.0 5.4E-43 1.2E-47 382.6 20.5 249 381-687 12-268 (786)
27 cd07848 STKc_CDKL5 Catalytic d 100.0 6.7E-42 1.5E-46 358.6 27.1 276 381-685 1-287 (287)
28 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-41 2.5E-46 360.7 27.3 281 380-687 4-293 (303)
29 cd07862 STKc_CDK6 Catalytic do 100.0 2.5E-41 5.5E-46 354.8 26.6 279 381-685 1-290 (290)
30 cd07876 STKc_JNK2 Catalytic do 100.0 3.7E-41 8.1E-46 365.9 28.6 298 370-687 7-320 (359)
31 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.3E-41 9.3E-46 360.8 27.9 277 382-687 1-295 (338)
32 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-43 3.3E-48 347.2 8.0 259 377-687 7-272 (355)
33 PTZ00036 glycogen synthase kin 100.0 4.9E-41 1.1E-45 375.4 28.1 282 379-687 64-356 (440)
34 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-40 2.3E-45 354.3 28.1 280 381-687 6-291 (309)
35 cd07874 STKc_JNK3 Catalytic do 100.0 1E-40 2.2E-45 361.7 27.9 289 379-687 15-316 (355)
36 cd05612 STKc_PRKX_like Catalyt 100.0 5.5E-41 1.2E-45 353.9 23.5 249 381-687 1-259 (291)
37 PHA03212 serine/threonine kina 100.0 9.6E-41 2.1E-45 367.5 26.0 279 380-687 91-381 (391)
38 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-40 4.8E-45 360.5 28.6 290 379-687 22-323 (364)
39 cd07863 STKc_CDK4 Catalytic do 100.0 2E-40 4.4E-45 347.3 26.8 278 382-685 1-288 (288)
40 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-40 2.9E-45 361.9 25.9 261 375-687 29-298 (382)
41 PTZ00263 protein kinase A cata 100.0 9.7E-41 2.1E-45 358.7 24.3 250 380-687 17-276 (329)
42 KOG0582 Ste20-like serine/thre 100.0 1.4E-40 3E-45 350.3 24.7 265 378-688 23-299 (516)
43 KOG0597 Serine-threonine prote 100.0 6.5E-42 1.4E-46 367.2 14.6 250 381-688 2-257 (808)
44 KOG0578 p21-activated serine/t 100.0 1.7E-41 3.6E-46 367.5 17.0 251 381-687 273-528 (550)
45 cd07853 STKc_NLK Catalytic dom 100.0 2.7E-40 5.9E-45 361.0 25.3 279 382-687 1-293 (372)
46 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-40 2.3E-45 352.9 19.2 255 378-688 94-378 (576)
47 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.4E-40 9.4E-45 354.9 23.9 279 379-687 13-303 (343)
48 PTZ00426 cAMP-dependent protei 100.0 6.7E-40 1.4E-44 354.2 25.0 254 376-687 25-289 (340)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.6E-40 1.4E-44 352.3 24.5 257 381-687 1-262 (333)
50 KOG0591 NIMA (never in mitosis 100.0 9.2E-42 2E-46 340.8 8.9 244 381-676 19-275 (375)
51 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-39 3.1E-44 346.4 26.4 286 387-685 7-317 (317)
52 cd05571 STKc_PKB Catalytic dom 100.0 5.5E-40 1.2E-44 351.7 22.6 243 387-687 1-256 (323)
53 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-39 8E-44 341.0 27.7 278 381-687 6-291 (301)
54 KOG0198 MEKK and related serin 100.0 2.1E-40 4.5E-45 348.5 17.6 253 381-687 17-281 (313)
55 KOG4717 Serine/threonine prote 100.0 3.2E-40 7E-45 350.1 18.5 256 376-687 13-275 (864)
56 cd05628 STKc_NDR1 Catalytic do 100.0 3E-39 6.4E-44 351.8 26.4 252 381-687 1-298 (363)
57 cd07850 STKc_JNK Catalytic dom 100.0 3.9E-39 8.4E-44 349.3 27.2 299 370-688 2-317 (353)
58 KOG0599 Phosphorylase kinase g 100.0 1.1E-40 2.3E-45 331.5 13.2 253 381-686 17-287 (411)
59 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-39 6.8E-44 345.9 25.4 249 383-687 1-262 (324)
60 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-39 4.5E-44 352.5 23.8 252 381-687 1-301 (364)
61 cd05631 STKc_GRK4 Catalytic do 100.0 2.5E-39 5.4E-44 340.1 23.5 253 383-687 2-266 (285)
62 cd05587 STKc_cPKC Catalytic do 100.0 4.8E-39 1E-43 344.5 26.1 249 382-687 1-262 (324)
63 cd07839 STKc_CDK5 Catalytic do 100.0 4.5E-39 9.8E-44 336.4 24.9 276 382-685 1-284 (284)
64 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-38 3.9E-43 331.7 28.5 278 382-685 1-285 (285)
65 KOG0610 Putative serine/threon 100.0 1E-39 2.2E-44 341.4 18.7 254 380-687 76-397 (459)
66 cd06649 PKc_MEK2 Catalytic dom 100.0 7.3E-39 1.6E-43 344.2 25.7 291 379-688 3-307 (331)
67 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.3E-39 5E-44 349.6 21.7 252 381-687 1-290 (350)
68 cd05626 STKc_LATS2 Catalytic d 100.0 5.3E-39 1.1E-43 352.2 24.6 252 382-687 2-310 (381)
69 KOG0580 Serine/threonine prote 100.0 6.6E-40 1.4E-44 321.6 15.5 256 380-687 21-278 (281)
70 cd05585 STKc_YPK1_like Catalyt 100.0 5.6E-39 1.2E-43 342.1 23.8 241 389-687 1-252 (312)
71 cd05629 STKc_NDR_like_fungal C 100.0 3.9E-39 8.4E-44 352.5 22.5 252 381-687 1-310 (377)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 6.2E-39 1.3E-43 343.3 23.5 244 387-687 1-258 (320)
73 cd05625 STKc_LATS1 Catalytic d 100.0 6.3E-39 1.4E-43 351.5 23.9 252 381-687 1-310 (382)
74 cd07867 STKc_CDC2L6 Catalytic 100.0 1.9E-38 4.2E-43 337.2 26.7 285 387-685 7-317 (317)
75 cd05593 STKc_PKB_gamma Catalyt 100.0 6.3E-39 1.4E-43 344.6 23.1 244 387-688 1-257 (328)
76 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-38 2.8E-43 341.0 25.3 249 382-687 1-262 (323)
77 KOG0611 Predicted serine/threo 100.0 6.1E-40 1.3E-44 340.0 14.2 253 378-689 50-310 (668)
78 KOG0666 Cyclin C-dependent kin 100.0 5.7E-40 1.2E-44 331.5 13.6 292 381-687 24-342 (438)
79 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-38 2.3E-43 340.9 24.0 244 387-687 1-253 (316)
80 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-38 2.3E-43 341.3 23.4 244 387-687 1-259 (321)
81 cd05598 STKc_LATS Catalytic do 100.0 5.5E-39 1.2E-43 351.1 21.4 252 381-687 1-306 (376)
82 KOG0662 Cyclin-dependent kinas 100.0 1.6E-39 3.4E-44 305.9 14.5 278 382-687 3-288 (292)
83 cd05595 STKc_PKB_beta Catalyti 100.0 1.2E-38 2.7E-43 341.4 23.4 243 387-687 1-256 (323)
84 PHA03209 serine/threonine kina 100.0 2E-38 4.3E-43 344.8 24.6 277 381-687 66-356 (357)
85 cd07845 STKc_CDK10 Catalytic d 100.0 4.2E-38 9.1E-43 334.2 26.5 281 380-687 6-295 (309)
86 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-38 4.6E-43 341.2 24.4 293 378-688 2-305 (333)
87 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-38 3.5E-43 347.3 23.5 253 380-687 42-309 (370)
88 cd05614 STKc_MSK2_N N-terminal 100.0 2.5E-38 5.4E-43 339.8 24.5 249 382-687 1-272 (332)
89 PF00069 Pkinase: Protein kina 100.0 4.3E-38 9.4E-43 323.4 25.1 252 383-685 1-260 (260)
90 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-38 4.6E-43 346.4 23.8 253 380-687 42-309 (370)
91 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-38 2.3E-43 342.3 21.0 253 381-687 1-268 (330)
92 cd07832 STKc_CCRK Catalytic do 100.0 9.2E-38 2E-42 326.2 27.4 278 382-686 1-286 (286)
93 PHA03207 serine/threonine kina 100.0 3.5E-38 7.6E-43 347.2 25.4 283 376-687 87-380 (392)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-38 2.7E-43 341.5 21.0 244 387-688 1-258 (325)
95 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-38 6.8E-43 337.3 23.8 244 387-687 1-253 (316)
96 cd05570 STKc_PKC Catalytic dom 100.0 3.5E-38 7.6E-43 337.1 24.0 244 387-687 1-257 (318)
97 cd05619 STKc_nPKC_theta Cataly 100.0 4.6E-38 1E-42 336.1 24.6 244 387-687 1-253 (316)
98 cd05627 STKc_NDR2 Catalytic do 100.0 2.7E-38 5.9E-43 343.7 22.8 252 381-687 1-298 (360)
99 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-37 3.5E-42 326.1 27.7 278 381-685 5-291 (291)
100 cd07837 STKc_CdkB_plant Cataly 100.0 1.7E-37 3.8E-42 326.2 27.9 283 381-686 1-295 (295)
101 cd05615 STKc_cPKC_alpha Cataly 100.0 8.6E-38 1.9E-42 334.9 25.8 249 382-687 1-262 (323)
102 cd05588 STKc_aPKC Catalytic do 100.0 5.7E-38 1.2E-42 337.2 23.6 253 387-687 1-267 (329)
103 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-37 2.3E-42 328.6 25.2 279 382-689 1-289 (298)
104 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-37 2.7E-42 330.3 25.6 287 382-685 1-316 (316)
105 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-37 3.3E-42 324.8 25.8 277 382-685 1-284 (284)
106 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.7E-37 8E-42 323.6 28.4 279 381-685 5-291 (291)
107 cd07831 STKc_MOK Catalytic dom 100.0 3.2E-37 6.9E-42 321.4 27.7 273 383-685 1-282 (282)
108 cd05584 STKc_p70S6K Catalytic 100.0 8.2E-38 1.8E-42 335.0 23.4 243 387-687 2-261 (323)
109 cd05597 STKc_DMPK_like Catalyt 100.0 1.9E-37 4.1E-42 333.4 26.1 255 381-687 1-271 (331)
110 cd07865 STKc_CDK9 Catalytic do 100.0 2.7E-37 6E-42 326.4 26.6 280 381-685 12-310 (310)
111 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-37 3.8E-42 326.0 24.7 254 382-687 1-266 (285)
112 PHA03211 serine/threonine kina 100.0 1.5E-37 3.4E-42 347.9 25.8 280 379-687 167-460 (461)
113 cd07847 STKc_CDKL1_4 Catalytic 100.0 7E-37 1.5E-41 319.5 28.9 276 381-685 1-286 (286)
114 PLN00009 cyclin-dependent kina 100.0 5.3E-37 1.2E-41 322.9 27.9 281 381-687 2-289 (294)
115 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-37 2.7E-42 334.7 23.5 253 387-687 1-267 (329)
116 cd05575 STKc_SGK Catalytic dom 100.0 9.4E-38 2E-42 334.4 22.2 244 387-687 1-256 (323)
117 cd05622 STKc_ROCK1 Catalytic d 100.0 1.3E-37 2.9E-42 340.2 23.8 254 379-687 41-309 (371)
118 PLN00034 mitogen-activated pro 100.0 8.3E-38 1.8E-42 339.0 21.0 251 381-688 74-334 (353)
119 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-37 4.6E-42 324.6 23.4 249 389-687 1-262 (280)
120 KOG0201 Serine/threonine prote 100.0 1.1E-39 2.3E-44 343.6 6.0 248 381-687 13-268 (467)
121 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-37 9E-42 331.0 25.8 280 379-688 3-298 (336)
122 cd07843 STKc_CDC2L1 Catalytic 100.0 4.8E-37 1.1E-41 323.0 25.6 280 381-685 5-293 (293)
123 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-36 2.3E-41 318.1 27.5 276 382-685 1-284 (284)
124 PTZ00024 cyclin-dependent prot 100.0 4.1E-37 8.8E-42 330.5 25.0 280 378-687 5-318 (335)
125 cd05582 STKc_RSK_N N-terminal 100.0 8.7E-38 1.9E-42 333.7 19.4 243 387-687 2-259 (318)
126 PHA03210 serine/threonine kina 100.0 2.6E-37 5.7E-42 350.7 23.9 292 375-687 142-459 (501)
127 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-36 2.4E-41 320.4 26.8 249 381-687 1-259 (290)
128 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.1E-37 1.1E-41 329.5 24.8 245 387-687 1-265 (327)
129 PTZ00283 serine/threonine prot 100.0 5.8E-37 1.3E-41 347.3 26.5 255 379-686 30-301 (496)
130 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-37 1.2E-41 329.7 24.9 255 381-687 1-271 (332)
131 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-36 2.3E-41 318.4 26.2 279 381-685 1-288 (288)
132 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-37 2.8E-42 334.1 19.7 245 389-687 1-258 (330)
133 cd05604 STKc_SGK3 Catalytic do 100.0 2E-37 4.3E-42 332.1 20.8 244 387-687 1-256 (325)
134 cd05624 STKc_MRCK_beta Catalyt 100.0 5.8E-37 1.3E-41 329.6 24.2 255 381-687 1-271 (331)
135 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.7E-37 2.1E-41 328.4 24.9 280 379-687 3-296 (337)
136 cd05630 STKc_GRK6 Catalytic do 100.0 9.7E-37 2.1E-41 320.6 24.3 254 382-687 1-266 (285)
137 PTZ00267 NIMA-related protein 100.0 1.4E-36 3E-41 343.1 27.2 253 381-686 67-327 (478)
138 cd06619 PKc_MKK5 Catalytic dom 100.0 6.9E-37 1.5E-41 320.1 22.8 255 381-687 1-258 (279)
139 KOG0192 Tyrosine kinase specif 100.0 7E-37 1.5E-41 330.3 23.4 245 381-681 41-298 (362)
140 cd05602 STKc_SGK1 Catalytic do 100.0 5.1E-37 1.1E-41 329.0 22.1 243 387-687 1-256 (325)
141 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.4E-36 5.2E-41 326.4 27.5 279 379-687 13-303 (343)
142 cd07851 STKc_p38 Catalytic dom 100.0 1E-36 2.2E-41 329.2 24.2 280 379-688 13-304 (343)
143 cd07835 STKc_CDK1_like Catalyt 100.0 2E-36 4.3E-41 316.2 25.4 276 383-685 1-283 (283)
144 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-36 3.9E-41 327.2 25.8 279 380-687 14-302 (342)
145 cd05603 STKc_SGK2 Catalytic do 100.0 6.6E-37 1.4E-41 327.3 22.0 243 387-687 1-256 (321)
146 cd07840 STKc_CDK9_like Catalyt 100.0 2.3E-36 5E-41 315.1 25.5 276 383-685 1-287 (287)
147 KOG0604 MAP kinase-activated p 100.0 5.3E-38 1.2E-42 316.1 12.5 260 379-687 59-327 (400)
148 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-36 5.5E-41 311.4 25.4 249 381-685 2-263 (263)
149 KOG0589 Serine/threonine prote 100.0 1.2E-37 2.6E-42 335.7 15.9 251 381-686 4-262 (426)
150 cd07834 STKc_MAPK Catalytic do 100.0 9.9E-37 2.1E-41 326.4 22.7 277 382-687 1-294 (330)
151 cd06637 STKc_TNIK Catalytic do 100.0 2E-36 4.3E-41 314.1 24.0 253 380-685 5-272 (272)
152 cd08227 PK_STRAD_alpha Pseudok 100.0 1.8E-36 3.9E-41 324.8 24.5 288 385-687 2-312 (327)
153 cd05632 STKc_GRK5 Catalytic do 100.0 3E-36 6.5E-41 316.7 25.5 254 382-687 1-266 (285)
154 cd07866 STKc_BUR1 Catalytic do 100.0 2.8E-36 6.1E-41 318.8 25.2 279 380-685 7-311 (311)
155 cd05607 STKc_GRK7 Catalytic do 100.0 2.8E-36 6.2E-41 315.6 24.9 248 389-687 1-259 (277)
156 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-36 5.8E-41 315.5 24.7 279 381-685 1-286 (286)
157 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.2E-36 4.7E-41 316.1 23.8 253 380-685 15-282 (282)
158 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.5E-36 1.4E-40 321.2 28.1 279 379-687 8-293 (328)
159 KOG0579 Ste20-like serine/thre 100.0 3.8E-38 8.2E-43 340.3 10.6 254 381-687 32-294 (1187)
160 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-36 3.1E-41 326.6 22.9 279 380-687 4-299 (334)
161 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.8E-36 8.2E-41 324.6 26.0 280 380-687 4-305 (342)
162 cd07877 STKc_p38alpha_MAPK14 C 100.0 7E-36 1.5E-40 323.1 27.8 279 379-687 15-305 (345)
163 KOG0690 Serine/threonine prote 100.0 5.3E-38 1.2E-42 318.3 10.4 252 379-687 166-429 (516)
164 PTZ00266 NIMA-related protein 100.0 3.1E-36 6.8E-41 354.5 26.7 261 376-687 8-300 (1021)
165 cd08529 STKc_FA2-like Catalyti 100.0 9.6E-36 2.1E-40 305.6 27.1 249 382-685 1-256 (256)
166 cd06615 PKc_MEK Catalytic doma 100.0 4.6E-36 1E-40 319.0 25.6 287 381-688 1-293 (308)
167 cd07857 STKc_MPK1 Catalytic do 100.0 8.1E-36 1.8E-40 320.4 27.7 279 382-686 1-296 (332)
168 KOG0596 Dual specificity; seri 100.0 7.6E-37 1.6E-41 328.5 18.9 254 380-687 360-632 (677)
169 cd07864 STKc_CDK12 Catalytic d 100.0 5.1E-36 1.1E-40 316.1 25.0 283 376-685 2-302 (302)
170 cd05118 STKc_CMGC Catalytic do 100.0 4.6E-36 9.9E-41 312.6 24.2 274 383-685 1-283 (283)
171 KOG4236 Serine/threonine prote 100.0 1.2E-37 2.6E-42 331.3 12.1 255 380-687 561-824 (888)
172 cd08223 STKc_Nek4 Catalytic do 100.0 1.5E-35 3.3E-40 304.6 27.4 249 382-685 1-257 (257)
173 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.2E-36 1.4E-40 312.2 24.7 256 381-687 1-266 (283)
174 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.4E-36 9.6E-41 322.9 24.0 255 378-681 4-329 (338)
175 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-35 2.8E-40 309.8 26.8 277 383-685 1-287 (287)
176 cd05574 STKc_phototropin_like 100.0 1.1E-35 2.4E-40 316.3 26.6 254 381-688 1-295 (316)
177 cd06608 STKc_myosinIII_like Ca 100.0 9.6E-36 2.1E-40 308.1 25.2 256 380-685 5-275 (275)
178 KOG0574 STE20-like serine/thre 100.0 6.2E-39 1.3E-43 322.1 1.0 252 382-688 34-289 (502)
179 cd06644 STKc_STK10_LOK Catalyt 100.0 1E-35 2.2E-40 313.1 25.4 254 380-687 11-274 (292)
180 cd07829 STKc_CDK_like Catalyti 100.0 7.5E-36 1.6E-40 310.8 23.9 275 383-685 1-282 (282)
181 cd07830 STKc_MAK_like Catalyti 100.0 7.7E-36 1.7E-40 311.5 23.9 276 383-685 1-283 (283)
182 cd06639 STKc_myosinIIIB Cataly 100.0 2.5E-35 5.4E-40 309.7 27.9 258 379-686 20-291 (291)
183 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-35 2.4E-40 305.2 24.4 250 381-685 3-256 (256)
184 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-35 3.6E-40 309.8 26.0 257 379-685 16-286 (286)
185 KOG0197 Tyrosine kinases [Sign 100.0 2.4E-36 5.2E-41 326.7 19.4 242 383-680 208-455 (468)
186 KOG1989 ARK protein kinase fam 100.0 3E-36 6.5E-41 341.7 20.8 246 380-682 36-307 (738)
187 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-35 2.6E-40 314.1 24.2 252 380-687 18-274 (297)
188 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-35 2.3E-40 309.6 23.4 251 381-688 1-257 (274)
189 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-35 5.8E-40 302.9 25.9 249 382-685 1-256 (256)
190 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-35 5.8E-40 311.3 26.5 252 380-687 19-275 (296)
191 cd06611 STKc_SLK_like Catalyti 100.0 1E-35 2.3E-40 310.6 23.0 254 381-688 5-268 (280)
192 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-35 3.2E-40 310.1 24.0 251 383-687 7-267 (282)
193 cd06645 STKc_MAP4K3 Catalytic 100.0 7.9E-36 1.7E-40 309.1 21.2 252 380-684 8-267 (267)
194 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.1E-35 8.9E-40 302.4 26.3 256 381-685 1-267 (267)
195 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-35 5.3E-40 305.1 24.6 247 382-685 1-267 (267)
196 cd08221 STKc_Nek9 Catalytic do 100.0 6.3E-35 1.4E-39 300.1 27.5 249 382-685 1-256 (256)
197 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-35 3.6E-40 306.6 23.1 252 380-684 8-267 (267)
198 cd06655 STKc_PAK2 Catalytic do 100.0 3.8E-35 8.3E-40 310.3 26.2 251 381-687 19-274 (296)
199 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-35 3.2E-40 318.9 23.3 282 378-687 4-300 (337)
200 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.7E-36 2.1E-40 311.8 20.9 256 381-687 1-267 (286)
201 cd08220 STKc_Nek8 Catalytic do 100.0 5.3E-35 1.1E-39 300.1 25.7 250 382-685 1-256 (256)
202 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-35 3.8E-40 306.0 22.2 253 382-686 1-268 (268)
203 cd06631 STKc_YSK4 Catalytic do 100.0 4.7E-35 1E-39 302.9 25.4 248 382-685 1-265 (265)
204 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-34 2.2E-39 304.9 28.1 260 381-687 1-271 (287)
205 cd06607 STKc_TAO Catalytic dom 100.0 4.1E-35 9E-40 311.1 24.7 255 378-688 12-273 (307)
206 KOG0607 MAP kinase-interacting 100.0 2.3E-36 4.9E-41 306.2 14.0 271 381-687 77-366 (463)
207 cd05609 STKc_MAST Catalytic do 100.0 1.1E-34 2.4E-39 307.6 27.7 252 381-687 1-278 (305)
208 cd08217 STKc_Nek2 Catalytic do 100.0 9.6E-35 2.1E-39 298.7 26.1 251 382-685 1-265 (265)
209 cd06613 STKc_MAP4K3_like Catal 100.0 1.1E-34 2.3E-39 298.8 26.4 252 381-684 3-262 (262)
210 KOG1151 Tousled-like protein k 100.0 4.8E-37 1E-41 321.2 8.6 266 377-686 459-745 (775)
211 cd06605 PKc_MAPKK Catalytic do 100.0 2.1E-35 4.6E-40 304.9 20.7 252 381-687 1-262 (265)
212 cd06616 PKc_MKK4 Catalytic dom 100.0 3E-35 6.5E-40 308.4 22.0 261 381-687 4-272 (288)
213 cd06632 STKc_MEKK1_plant Catal 100.0 9.8E-35 2.1E-39 298.1 25.1 248 382-685 1-258 (258)
214 KOG0669 Cyclin T-dependent kin 100.0 1.8E-37 3.9E-42 305.6 4.5 282 380-687 16-320 (376)
215 cd05096 PTKc_DDR1 Catalytic do 100.0 1E-34 2.2E-39 307.6 25.8 258 380-681 4-300 (304)
216 cd05611 STKc_Rim15_like Cataly 100.0 8E-35 1.7E-39 300.3 24.0 247 387-687 2-256 (260)
217 cd05578 STKc_Yank1 Catalytic d 100.0 3.8E-35 8.2E-40 302.4 21.4 246 382-685 1-258 (258)
218 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-34 3.4E-39 299.2 25.7 249 379-682 4-258 (263)
219 PHA03390 pk1 serine/threonine- 100.0 9.3E-35 2E-39 302.7 24.1 248 381-687 14-267 (267)
220 cd08225 STKc_Nek5 Catalytic do 100.0 1.3E-34 2.8E-39 297.4 24.7 250 382-685 1-257 (257)
221 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-34 3.1E-39 300.5 25.3 252 382-685 2-272 (272)
222 cd06651 STKc_MEKK3 Catalytic d 100.0 9.4E-35 2E-39 301.4 23.8 249 381-686 2-265 (266)
223 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-34 2.7E-39 299.3 24.2 243 389-687 1-257 (262)
224 cd05581 STKc_PDK1 Catalytic do 100.0 6.9E-35 1.5E-39 302.9 22.4 248 381-685 1-280 (280)
225 cd08219 STKc_Nek3 Catalytic do 100.0 2E-34 4.3E-39 296.5 25.4 246 382-682 1-252 (255)
226 cd05633 STKc_GRK3 Catalytic do 100.0 1.7E-34 3.6E-39 302.7 25.2 246 388-687 1-260 (279)
227 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-34 2.4E-39 302.9 23.2 249 381-687 4-258 (277)
228 cd06652 STKc_MEKK2 Catalytic d 100.0 2.1E-34 4.5E-39 298.4 24.9 249 381-686 2-265 (265)
229 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.2E-34 4.7E-39 299.1 25.1 246 380-681 4-260 (266)
230 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-34 3.5E-39 300.8 24.1 253 382-688 2-261 (277)
231 cd06623 PKc_MAPKK_plant_like C 100.0 2.2E-34 4.8E-39 296.4 24.8 251 381-687 1-261 (264)
232 cd06626 STKc_MEKK4 Catalytic d 100.0 3E-34 6.5E-39 295.8 25.2 249 382-685 1-264 (264)
233 KOG0665 Jun-N-terminal kinase 100.0 1.4E-35 3E-40 301.6 14.7 288 378-686 14-314 (369)
234 PHA02988 hypothetical protein; 100.0 2E-34 4.4E-39 303.2 24.2 237 387-681 26-274 (283)
235 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.1E-34 2.4E-39 303.9 22.1 264 380-688 4-272 (284)
236 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-34 3.5E-39 316.2 24.1 255 378-681 35-367 (374)
237 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.4E-34 9.4E-39 294.4 25.7 244 381-681 4-253 (256)
238 KOG0668 Casein kinase II, alph 100.0 7.1E-36 1.5E-40 290.8 11.5 286 369-686 28-326 (338)
239 cd08215 STKc_Nek Catalytic dom 100.0 4.9E-34 1.1E-38 291.8 25.8 251 382-685 1-258 (258)
240 cd06658 STKc_PAK5 Catalytic do 100.0 8.4E-35 1.8E-39 307.1 20.5 251 381-687 22-277 (292)
241 cd05061 PTKc_InsR Catalytic do 100.0 5.4E-34 1.2E-38 299.6 26.5 260 377-687 2-285 (288)
242 cd05606 STKc_beta_ARK Catalyti 100.0 2.9E-34 6.3E-39 300.5 24.4 245 388-687 1-260 (278)
243 cd05122 PKc_STE Catalytic doma 100.0 7.2E-34 1.6E-38 289.0 26.6 249 382-684 1-253 (253)
244 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-34 3E-39 306.2 21.8 250 383-688 23-277 (297)
245 KOG0612 Rho-associated, coiled 100.0 4E-36 8.6E-41 344.1 10.4 254 379-687 73-343 (1317)
246 KOG0603 Ribosomal protein S6 k 100.0 2.8E-35 6.1E-40 323.2 16.6 248 379-688 320-570 (612)
247 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-34 5E-39 300.5 22.7 247 389-687 1-259 (277)
248 KOG4279 Serine/threonine prote 100.0 1.9E-35 4.1E-40 322.4 14.8 244 388-687 582-837 (1226)
249 cd05104 PTKc_Kit Catalytic dom 100.0 3E-34 6.6E-39 314.1 24.4 254 380-682 34-370 (375)
250 cd05072 PTKc_Lyn Catalytic dom 100.0 6.3E-34 1.4E-38 293.8 25.4 247 379-681 4-256 (261)
251 cd05049 PTKc_Trk Catalytic dom 100.0 2.7E-34 5.9E-39 299.3 22.8 250 381-681 5-276 (280)
252 cd06618 PKc_MKK7 Catalytic dom 100.0 4.3E-34 9.4E-39 301.5 24.4 255 380-687 14-278 (296)
253 cd08228 STKc_Nek6 Catalytic do 100.0 8.1E-34 1.8E-38 293.7 25.8 250 381-682 2-261 (267)
254 KOG2345 Serine/threonine prote 100.0 4.3E-35 9.3E-40 288.9 15.4 253 380-682 20-296 (302)
255 cd05062 PTKc_IGF-1R Catalytic 100.0 7E-34 1.5E-38 296.6 25.4 255 377-682 2-274 (277)
256 cd06641 STKc_MST3 Catalytic do 100.0 4.9E-34 1.1E-38 298.0 24.2 249 382-688 5-259 (277)
257 cd06633 STKc_TAO3 Catalytic do 100.0 9.6E-34 2.1E-38 302.0 26.9 251 381-687 21-278 (313)
258 cd08226 PK_STRAD_beta Pseudoki 100.0 2.1E-34 4.6E-39 308.9 21.9 289 387-687 4-313 (328)
259 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.1E-34 2E-38 296.0 26.1 254 380-682 5-274 (277)
260 cd05048 PTKc_Ror Catalytic Dom 100.0 4.8E-34 1.1E-38 298.2 24.0 251 381-682 5-279 (283)
261 cd06647 STKc_PAK_I Catalytic d 100.0 2.7E-34 5.9E-39 303.2 22.2 253 380-688 18-275 (293)
262 cd06606 STKc_MAPKKK Catalytic 100.0 1.3E-33 2.8E-38 288.3 26.1 248 382-685 1-260 (260)
263 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.9E-34 1.9E-38 292.8 25.0 245 381-682 4-254 (256)
264 cd05071 PTKc_Src Catalytic dom 100.0 1E-33 2.2E-38 293.4 25.6 247 378-681 3-255 (262)
265 cd06627 STKc_Cdc7_like Catalyt 100.0 1.5E-33 3.2E-38 288.3 26.3 247 382-685 1-254 (254)
266 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.1E-35 1.1E-39 305.2 15.7 248 381-686 4-257 (277)
267 cd06648 STKc_PAK_II Catalytic 100.0 1E-33 2.2E-38 297.5 25.6 251 382-688 20-275 (285)
268 cd05068 PTKc_Frk_like Catalyti 100.0 1.4E-33 3E-38 291.6 26.0 248 378-681 3-256 (261)
269 cd08222 STKc_Nek11 Catalytic d 100.0 2.5E-34 5.5E-39 296.6 20.0 250 382-685 1-260 (260)
270 KOG0586 Serine/threonine prote 100.0 8.5E-35 1.9E-39 317.9 17.1 251 380-688 55-312 (596)
271 KOG0577 Serine/threonine prote 100.0 3.8E-35 8.3E-40 315.9 14.1 251 382-688 27-284 (948)
272 cd06624 STKc_ASK Catalytic dom 100.0 1.6E-33 3.4E-38 292.3 25.7 248 387-685 14-268 (268)
273 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-33 2.7E-38 291.7 24.8 248 377-681 2-255 (260)
274 KOG0983 Mitogen-activated prot 100.0 7.1E-35 1.5E-39 290.2 14.8 253 382-687 93-354 (391)
275 cd05089 PTKc_Tie1 Catalytic do 100.0 1.3E-33 2.9E-38 298.1 25.4 252 381-682 2-271 (297)
276 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-33 2.3E-38 293.2 24.2 249 383-682 1-268 (273)
277 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-33 2.7E-38 291.7 24.6 247 378-681 3-255 (260)
278 cd06614 STKc_PAK Catalytic dom 100.0 9.1E-34 2E-38 297.1 23.8 256 379-688 17-276 (286)
279 cd05579 STKc_MAST_like Catalyt 100.0 6.9E-34 1.5E-38 292.3 22.0 244 389-688 1-263 (265)
280 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-33 3.1E-38 289.6 24.1 239 387-681 1-248 (252)
281 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-33 2.5E-38 291.5 23.5 245 381-682 4-254 (256)
282 cd05034 PTKc_Src_like Catalyti 100.0 2.6E-33 5.7E-38 288.9 26.1 248 378-681 3-256 (261)
283 cd05075 PTKc_Axl Catalytic dom 100.0 1.5E-33 3.3E-38 292.5 24.4 248 384-682 2-267 (272)
284 PHA02882 putative serine/threo 100.0 1.9E-33 4E-38 297.2 25.5 263 375-681 6-291 (294)
285 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-33 5.1E-38 293.6 25.7 251 381-682 5-279 (283)
286 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.3E-33 4.9E-38 297.8 25.9 256 377-682 14-295 (307)
287 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.8E-34 1.7E-38 292.8 21.7 246 380-681 5-256 (261)
288 cd05039 PTKc_Csk_like Catalyti 100.0 2.8E-33 6E-38 288.2 25.8 245 380-681 5-251 (256)
289 KOG0986 G protein-coupled rece 100.0 7.9E-35 1.7E-39 306.6 14.4 257 380-687 184-451 (591)
290 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-33 5.4E-38 287.3 25.2 251 382-685 1-256 (256)
291 cd05093 PTKc_TrkB Catalytic do 100.0 2.3E-33 5E-38 294.8 25.6 250 381-681 5-274 (288)
292 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-33 7.1E-38 288.8 25.7 247 378-681 3-255 (260)
293 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-33 3.3E-38 298.9 23.8 252 381-682 7-276 (303)
294 cd06635 STKc_TAO1 Catalytic do 100.0 2.6E-33 5.7E-38 299.0 25.7 251 381-687 25-282 (317)
295 cd05613 STKc_MSK1_N N-terminal 100.0 2.6E-33 5.6E-38 294.3 25.0 253 382-687 1-273 (290)
296 cd06657 STKc_PAK4 Catalytic do 100.0 2E-33 4.2E-38 296.8 24.1 247 386-688 25-276 (292)
297 cd05032 PTKc_InsR_like Catalyt 100.0 2.5E-33 5.5E-38 291.6 24.6 254 378-682 3-274 (277)
298 cd05053 PTKc_FGFR Catalytic do 100.0 3E-33 6.6E-38 293.9 25.0 255 378-682 9-287 (293)
299 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-33 3.2E-38 299.7 22.8 251 381-687 15-272 (308)
300 cd05108 PTKc_EGFR Catalytic do 100.0 2E-33 4.4E-38 299.6 23.8 246 380-682 6-264 (316)
301 cd05082 PTKc_Csk Catalytic dom 100.0 4.1E-33 8.9E-38 287.2 25.2 243 381-681 6-251 (256)
302 cd05054 PTKc_VEGFR Catalytic d 100.0 1E-33 2.3E-38 305.4 21.7 255 379-682 5-329 (337)
303 cd00192 PTKc Catalytic domain 100.0 2.9E-33 6.2E-38 286.8 23.7 245 387-682 1-260 (262)
304 cd05123 STKc_AGC Catalytic dom 100.0 2.5E-33 5.4E-38 286.6 23.0 239 389-685 1-250 (250)
305 PRK13184 pknD serine/threonine 100.0 3.6E-33 7.8E-38 327.5 27.0 252 381-681 2-284 (932)
306 cd08229 STKc_Nek7 Catalytic do 100.0 2E-33 4.2E-38 290.8 22.1 249 381-681 2-260 (267)
307 cd06653 STKc_MEKK3_like_1 Cata 100.0 6E-33 1.3E-37 287.5 25.0 248 381-685 2-264 (264)
308 cd05055 PTKc_PDGFR Catalytic d 100.0 5.6E-33 1.2E-37 294.6 25.3 252 377-681 31-296 (302)
309 cd08216 PK_STRAD Pseudokinase 100.0 3.9E-33 8.4E-38 296.3 23.9 274 393-688 12-301 (314)
310 cd05112 PTKc_Itk Catalytic dom 100.0 9E-33 2E-37 284.1 25.8 245 381-682 4-254 (256)
311 cd05033 PTKc_EphR Catalytic do 100.0 5.3E-33 1.2E-37 288.0 24.2 246 381-682 4-261 (266)
312 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-32 2.7E-37 284.3 26.7 249 381-681 2-260 (267)
313 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-32 2.3E-37 293.8 26.9 253 379-681 10-288 (314)
314 cd05073 PTKc_Hck Catalytic dom 100.0 1E-32 2.2E-37 285.2 25.7 248 377-681 2-255 (260)
315 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.8E-33 1.7E-37 297.6 25.8 256 377-682 8-289 (334)
316 KOG4721 Serine/threonine prote 100.0 2.3E-34 4.9E-39 308.9 13.6 234 386-683 129-365 (904)
317 cd05109 PTKc_HER2 Catalytic do 100.0 1E-32 2.2E-37 288.2 25.6 245 380-681 6-263 (279)
318 KOG0193 Serine/threonine prote 100.0 4.6E-34 9.9E-39 310.5 15.8 253 373-681 384-648 (678)
319 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-33 5.8E-38 292.8 21.2 251 381-682 5-279 (283)
320 cd05051 PTKc_DDR Catalytic dom 100.0 7.8E-33 1.7E-37 291.0 24.6 258 380-681 4-292 (296)
321 KOG0584 Serine/threonine prote 100.0 3.5E-34 7.5E-39 313.4 14.7 250 381-687 39-301 (632)
322 cd05045 PTKc_RET Catalytic dom 100.0 1E-32 2.2E-37 290.0 25.3 249 382-681 1-281 (290)
323 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-32 2.4E-37 290.0 25.6 250 381-681 5-277 (291)
324 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.4E-33 1.6E-37 305.7 25.3 253 380-681 36-392 (400)
325 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-32 2.5E-37 291.7 25.8 256 377-682 11-292 (304)
326 cd05610 STKc_MASTL Catalytic d 100.0 1E-32 2.2E-37 323.0 27.8 144 381-538 4-152 (669)
327 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-32 3.4E-37 284.5 26.0 246 380-681 4-262 (268)
328 cd05083 PTKc_Chk Catalytic dom 100.0 1E-32 2.2E-37 283.9 24.1 242 381-681 6-249 (254)
329 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-32 2.4E-37 289.2 24.9 254 382-688 1-272 (288)
330 cd05116 PTKc_Syk Catalytic dom 100.0 1.4E-32 3.1E-37 283.6 24.6 236 388-681 2-250 (257)
331 KOG1026 Nerve growth factor re 100.0 1.2E-33 2.7E-38 319.1 17.9 250 380-680 485-756 (774)
332 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-32 2.8E-37 288.6 24.5 251 380-681 4-284 (288)
333 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-32 3.9E-37 284.4 25.2 246 380-681 3-261 (267)
334 PF07714 Pkinase_Tyr: Protein 100.0 8.2E-33 1.8E-37 286.7 22.6 243 384-681 2-257 (259)
335 KOG0664 Nemo-like MAPK-related 100.0 5.6E-35 1.2E-39 290.5 5.8 272 387-687 59-348 (449)
336 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-32 2.3E-37 290.8 23.5 258 380-681 4-291 (295)
337 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.5E-33 1.6E-37 299.2 22.8 255 379-682 5-335 (343)
338 cd05065 PTKc_EphR_B Catalytic 100.0 1.7E-32 3.6E-37 284.8 24.1 246 381-682 4-264 (269)
339 cd05095 PTKc_DDR2 Catalytic do 100.0 1.8E-32 3.9E-37 289.2 24.7 258 380-681 4-292 (296)
340 cd05047 PTKc_Tie Catalytic dom 100.0 2E-32 4.4E-37 284.7 24.6 245 388-682 2-264 (270)
341 smart00219 TyrKc Tyrosine kina 100.0 2.4E-32 5.2E-37 280.1 24.7 243 384-681 2-256 (258)
342 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.5E-32 3.3E-37 287.4 23.5 259 380-681 2-276 (283)
343 cd05060 PTKc_Syk_like Catalyti 100.0 2.2E-32 4.7E-37 281.9 24.2 237 387-681 1-250 (257)
344 cd05576 STKc_RPK118_like Catal 100.0 6.1E-33 1.3E-37 283.7 19.7 228 392-685 4-237 (237)
345 cd05111 PTK_HER3 Pseudokinase 100.0 2.6E-32 5.6E-37 285.7 24.6 244 381-681 7-263 (279)
346 cd05092 PTKc_TrkA Catalytic do 100.0 2.3E-32 5.1E-37 286.0 24.2 251 380-681 4-276 (280)
347 cd05041 PTKc_Fes_like Catalyti 100.0 4.6E-32 1E-36 278.0 24.3 238 387-681 1-247 (251)
348 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.5E-32 7.7E-37 300.3 25.1 256 378-682 34-395 (401)
349 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-32 9.9E-37 279.0 24.3 240 387-681 1-253 (257)
350 cd05056 PTKc_FAK Catalytic dom 100.0 5.9E-32 1.3E-36 280.8 24.8 247 379-682 4-261 (270)
351 PLN03225 Serine/threonine-prot 100.0 2.5E-32 5.5E-37 313.0 23.9 274 380-687 131-455 (566)
352 cd08528 STKc_Nek10 Catalytic d 100.0 6.3E-32 1.4E-36 280.1 24.3 250 382-682 1-266 (269)
353 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-34 4.1E-39 334.1 5.8 251 380-686 1234-1498(1509)
354 cd05044 PTKc_c-ros Catalytic d 100.0 3.1E-32 6.7E-37 282.2 21.8 245 388-681 2-265 (269)
355 cd05046 PTK_CCK4 Pseudokinase 100.0 5.3E-32 1.1E-36 281.6 23.6 252 381-682 5-272 (275)
356 cd05115 PTKc_Zap-70 Catalytic 100.0 8.7E-32 1.9E-36 278.4 25.0 238 388-682 2-251 (257)
357 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6E-32 1.3E-36 280.6 23.8 240 387-682 1-260 (262)
358 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.4E-32 9.5E-37 278.9 22.5 237 387-681 1-256 (259)
359 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-31 2.4E-36 280.3 25.9 245 380-681 6-263 (279)
360 cd05043 PTK_Ryk Pseudokinase d 100.0 9.5E-32 2.1E-36 280.7 25.2 252 379-681 4-271 (280)
361 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-32 3.7E-37 283.4 18.6 239 387-682 1-256 (258)
362 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-31 3E-36 274.3 25.1 239 387-682 1-247 (250)
363 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-31 3.1E-36 279.9 25.2 262 381-682 4-279 (284)
364 cd05042 PTKc_Aatyk Catalytic d 100.0 1.2E-31 2.7E-36 278.2 24.4 247 388-682 2-266 (269)
365 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-31 2.2E-36 278.9 23.4 249 383-682 1-268 (273)
366 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7E-32 1.5E-36 282.8 21.9 260 382-682 5-279 (284)
367 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-31 2.6E-36 280.3 23.6 238 388-682 2-272 (274)
368 KOG1035 eIF-2alpha kinase GCN2 100.0 8.8E-33 1.9E-37 319.0 16.3 253 379-686 477-875 (1351)
369 KOG0614 cGMP-dependent protein 100.0 7.5E-34 1.6E-38 302.0 6.4 251 381-687 420-682 (732)
370 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-31 4.6E-36 276.7 24.5 246 388-681 2-265 (269)
371 cd05110 PTKc_HER4 Catalytic do 100.0 2.2E-31 4.7E-36 282.3 24.3 246 380-682 6-264 (303)
372 cd05058 PTKc_Met_Ron Catalytic 100.0 2.2E-31 4.7E-36 274.8 23.6 240 387-682 1-255 (262)
373 KOG4250 TANK binding protein k 100.0 5.2E-33 1.1E-37 307.5 12.1 273 374-674 6-296 (732)
374 KOG1187 Serine/threonine prote 100.0 4.8E-32 1E-36 294.1 18.9 197 381-590 75-281 (361)
375 KOG0587 Traf2- and Nck-interac 100.0 6.8E-32 1.5E-36 303.5 19.6 256 380-687 18-287 (953)
376 KOG0194 Protein tyrosine kinas 100.0 7.7E-32 1.7E-36 295.7 18.6 252 375-681 151-415 (474)
377 KOG0695 Serine/threonine prote 100.0 3.6E-32 7.8E-37 276.6 14.7 253 380-687 249-521 (593)
378 KOG0608 Warts/lats-like serine 100.0 4.8E-32 1.1E-36 293.8 16.5 252 381-687 629-933 (1034)
379 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.8E-31 6.2E-36 276.6 21.5 260 381-681 4-278 (284)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-30 2.3E-35 271.7 24.0 245 388-681 2-264 (268)
381 KOG1006 Mitogen-activated prot 100.0 6.1E-33 1.3E-37 275.7 5.3 264 377-686 60-331 (361)
382 KOG1095 Protein tyrosine kinas 100.0 7.7E-31 1.7E-35 306.1 22.1 251 380-681 691-956 (1025)
383 KOG1167 Serine/threonine prote 100.0 1.1E-31 2.4E-36 282.4 11.6 293 378-687 33-386 (418)
384 KOG1027 Serine/threonine prote 100.0 1.1E-31 2.4E-36 300.6 11.4 246 387-686 515-771 (903)
385 KOG4278 Protein tyrosine kinas 100.0 1.1E-30 2.4E-35 282.3 17.3 249 377-680 263-517 (1157)
386 smart00220 S_TKc Serine/Threon 100.0 6.7E-30 1.4E-34 257.6 22.0 238 393-685 1-244 (244)
387 PLN03224 probable serine/threo 100.0 5.8E-30 1.3E-34 287.7 23.5 276 380-689 144-507 (507)
388 KOG4257 Focal adhesion tyrosin 100.0 5.9E-30 1.3E-34 277.5 14.8 241 383-680 391-643 (974)
389 KOG1094 Discoidin domain recep 100.0 1.4E-29 3E-34 273.4 16.8 253 380-681 537-799 (807)
390 KOG0199 ACK and related non-re 100.0 1.1E-29 2.4E-34 278.4 12.5 246 381-682 110-368 (1039)
391 KOG1152 Signal transduction se 100.0 1.1E-29 2.4E-34 274.0 11.7 198 381-589 561-771 (772)
392 KOG0196 Tyrosine kinase, EPH ( 100.0 3.4E-29 7.4E-34 278.0 13.1 247 380-682 628-887 (996)
393 KOG0984 Mitogen-activated prot 100.0 6.3E-29 1.4E-33 239.4 12.6 213 381-602 46-268 (282)
394 KOG2052 Activin A type IB rece 100.0 2.5E-28 5.3E-33 257.8 16.2 259 367-678 197-495 (513)
395 KOG3653 Transforming growth fa 100.0 1.3E-28 2.9E-33 261.6 12.9 261 381-678 210-495 (534)
396 PLN00113 leucine-rich repeat r 100.0 5.3E-28 1.2E-32 295.3 19.1 186 381-588 690-879 (968)
397 KOG1345 Serine/threonine kinas 99.9 8.2E-29 1.8E-33 246.9 5.8 259 379-685 22-290 (378)
398 KOG0200 Fibroblast/platelet-de 99.9 7.7E-27 1.7E-31 270.1 23.1 255 377-681 292-574 (609)
399 cd00180 PKc Catalytic domain o 99.9 6.8E-26 1.5E-30 222.0 22.8 208 389-683 1-215 (215)
400 KOG0576 Mitogen-activated prot 99.9 1.9E-28 4.1E-33 268.4 4.8 256 380-688 14-277 (829)
401 KOG1025 Epidermal growth facto 99.9 7.9E-27 1.7E-31 259.9 12.7 242 383-681 698-952 (1177)
402 PLN00181 protein SPA1-RELATED; 99.9 9E-27 2E-31 278.5 10.9 194 444-687 34-270 (793)
403 smart00221 STYKc Protein kinas 99.9 6.8E-25 1.5E-29 219.5 21.1 205 383-600 1-215 (225)
404 KOG1163 Casein kinase (serine/ 99.9 5.7E-25 1.2E-29 216.4 15.4 227 378-615 12-252 (341)
405 KOG1165 Casein kinase (serine/ 99.9 1.3E-24 2.8E-29 222.4 15.7 226 378-614 25-266 (449)
406 KOG1164 Casein kinase (serine/ 99.9 5.8E-23 1.3E-27 220.6 23.5 204 382-591 19-241 (322)
407 KOG1024 Receptor-like protein 99.9 7E-24 1.5E-28 220.5 15.6 252 379-681 282-550 (563)
408 smart00750 KIND kinase non-cat 99.9 3.8E-24 8.3E-29 208.1 12.3 168 467-686 1-169 (176)
409 KOG0590 Checkpoint kinase and 99.9 7.1E-24 1.5E-28 243.2 7.2 263 381-688 317-591 (601)
410 COG0515 SPS1 Serine/threonine 99.9 1.3E-20 2.7E-25 195.0 25.1 257 383-687 2-280 (384)
411 cd08677 C2A_Synaptotagmin-13 C 99.9 1.2E-22 2.5E-27 184.1 5.4 93 231-329 12-106 (118)
412 PRK09188 serine/threonine prot 99.9 5.1E-21 1.1E-25 207.2 14.7 166 372-561 9-194 (365)
413 PF14531 Kinase-like: Kinase-l 99.8 3.6E-20 7.8E-25 193.1 17.8 206 383-590 14-253 (288)
414 KOG1240 Protein kinase contain 99.8 2.4E-21 5.2E-26 222.6 7.5 244 382-682 24-291 (1431)
415 KOG0603 Ribosomal protein S6 k 99.8 2.1E-21 4.5E-26 214.2 3.6 236 388-687 1-248 (612)
416 cd08692 C2B_Tac2-N C2 domain s 99.8 3.4E-21 7.4E-26 178.6 4.4 107 231-339 12-120 (135)
417 cd08407 C2B_Synaptotagmin-13 C 99.8 3.3E-21 7.1E-26 180.9 3.9 104 231-337 13-120 (138)
418 KOG0606 Microtubule-associated 99.8 2.7E-20 6E-25 214.1 10.9 218 380-687 82-320 (1205)
419 PRK10359 lipopolysaccharide co 99.8 4.7E-20 1E-24 186.8 10.8 177 371-581 21-216 (232)
420 cd08680 C2_Kibra C2 domain fou 99.8 1.9E-20 4.1E-25 172.8 5.4 99 231-331 12-113 (124)
421 cd08406 C2B_Synaptotagmin-12 C 99.8 1.8E-20 3.9E-25 175.8 3.1 103 231-336 13-117 (136)
422 cd05147 RIO1_euk RIO kinase fa 99.8 4.5E-19 9.8E-24 176.1 11.7 139 386-541 2-168 (190)
423 KOG1166 Mitotic checkpoint ser 99.8 5.5E-19 1.2E-23 207.3 12.5 203 371-585 688-901 (974)
424 cd05145 RIO1_like RIO kinase f 99.8 5.4E-18 1.2E-22 168.3 14.8 140 386-542 2-169 (190)
425 cd04028 C2B_RIM1alpha C2 domai 99.8 3.4E-19 7.5E-24 168.5 5.8 95 232-330 28-125 (146)
426 cd08392 C2A_SLP-3 C2 domain fi 99.8 3.3E-19 7.1E-24 165.7 5.3 100 231-332 13-115 (128)
427 PRK12274 serine/threonine prot 99.8 1.6E-17 3.5E-22 165.4 16.3 182 384-590 5-210 (218)
428 KOG4158 BRPK/PTEN-induced prot 99.8 3.5E-18 7.5E-23 178.8 11.7 191 440-679 273-507 (598)
429 cd08381 C2B_PI3K_class_II C2 d 99.8 5.8E-19 1.3E-23 162.7 5.2 97 232-331 12-111 (122)
430 cd08685 C2_RGS-like C2 domain 99.7 9E-19 2E-23 160.7 4.8 98 231-331 10-109 (119)
431 cd08393 C2A_SLP-1_2 C2 domain 99.7 1.1E-18 2.3E-23 161.7 5.1 100 231-332 13-115 (125)
432 cd08408 C2B_Synaptotagmin-14_1 99.7 9.6E-19 2.1E-23 164.7 2.9 98 231-330 13-113 (138)
433 PRK10345 hypothetical protein; 99.7 6.6E-17 1.4E-21 162.8 15.2 139 386-537 7-156 (210)
434 cd04029 C2A_SLP-4_5 C2 domain 99.7 4.7E-18 1E-22 157.4 5.4 100 231-332 13-115 (125)
435 smart00090 RIO RIO-like kinase 99.7 8.5E-17 1.8E-21 165.3 12.2 144 383-542 30-200 (237)
436 cd08395 C2C_Munc13 C2 domain t 99.7 1.8E-17 3.9E-22 151.9 5.1 97 234-333 1-102 (120)
437 KOG0195 Integrin-linked kinase 99.7 1.8E-17 3.9E-22 165.9 5.5 242 381-680 190-440 (448)
438 cd08409 C2B_Synaptotagmin-15 C 99.7 1.9E-17 4.2E-22 155.7 2.9 106 231-339 13-121 (137)
439 cd08410 C2B_Synaptotagmin-17 C 99.6 4.6E-17 1E-21 152.8 3.3 95 231-327 12-108 (135)
440 cd08384 C2B_Rabphilin_Doc2 C2 99.6 8.8E-17 1.9E-21 150.3 4.2 96 231-328 11-108 (133)
441 KOG1028 Ca2+-dependent phospho 99.6 9.9E-17 2.1E-21 177.0 5.2 97 231-331 165-263 (421)
442 cd08404 C2B_Synaptotagmin-4 C2 99.6 9E-17 2E-21 150.9 3.5 102 231-335 13-116 (136)
443 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.6 2.5E-16 5.5E-21 152.3 5.6 118 230-351 24-143 (162)
444 cd08389 C2A_Synaptotagmin-14_1 99.6 3.4E-16 7.4E-21 144.7 5.1 98 231-332 14-113 (124)
445 cd08521 C2A_SLP C2 domain firs 99.6 4.7E-16 1E-20 143.1 5.6 98 231-330 12-112 (123)
446 PRK14879 serine/threonine prot 99.6 8.8E-15 1.9E-19 146.8 15.1 133 387-540 2-144 (211)
447 cd08403 C2B_Synaptotagmin-3-5- 99.6 2.6E-16 5.6E-21 147.4 3.5 95 231-327 12-108 (134)
448 cd08402 C2B_Synaptotagmin-1 C2 99.6 2.5E-16 5.5E-21 147.8 3.4 96 231-328 13-110 (136)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 5.9E-16 1.3E-20 168.5 6.5 178 455-686 328-516 (516)
450 cd08388 C2A_Synaptotagmin-4-11 99.6 4.9E-16 1.1E-20 144.5 5.0 97 231-330 14-113 (128)
451 cd04030 C2C_KIAA1228 C2 domain 99.6 5.7E-16 1.2E-20 143.4 5.2 99 231-331 14-116 (127)
452 cd08387 C2A_Synaptotagmin-8 C2 99.6 5.8E-16 1.3E-20 142.9 5.1 98 231-332 14-113 (124)
453 cd04010 C2B_RasA3 C2 domain se 99.6 7.3E-16 1.6E-20 146.5 5.3 97 234-332 1-110 (148)
454 cd04031 C2A_RIM1alpha C2 domai 99.6 1E-15 2.2E-20 141.2 5.8 97 231-328 14-112 (125)
455 cd08405 C2B_Synaptotagmin-7 C2 99.6 5.6E-16 1.2E-20 145.5 3.7 97 231-329 13-111 (136)
456 cd08385 C2A_Synaptotagmin-1-5- 99.6 1E-15 2.2E-20 141.3 5.1 97 231-331 14-112 (124)
457 KOG1028 Ca2+-dependent phospho 99.6 6.2E-16 1.3E-20 170.7 3.6 96 231-328 296-393 (421)
458 cd05144 RIO2_C RIO kinase fami 99.6 1.7E-14 3.8E-19 143.8 12.8 138 383-542 17-177 (198)
459 TIGR03724 arch_bud32 Kae1-asso 99.6 3.7E-14 7.9E-19 141.1 14.3 129 388-540 1-139 (199)
460 cd04041 C2A_fungal C2 domain f 99.6 3E-15 6.6E-20 135.6 5.4 96 233-332 1-100 (111)
461 cd05119 RIO RIO kinase family, 99.5 2.4E-14 5.2E-19 140.9 11.2 139 386-542 2-166 (187)
462 cd04039 C2_PSD C2 domain prese 99.5 7.8E-15 1.7E-19 132.2 5.3 92 233-331 1-97 (108)
463 cd08682 C2_Rab11-FIP_classI C2 99.5 6.1E-15 1.3E-19 136.6 4.6 89 235-330 1-94 (126)
464 cd08386 C2A_Synaptotagmin-7 C2 99.5 8.7E-15 1.9E-19 135.1 5.6 98 231-331 14-113 (125)
465 cd04009 C2B_Munc13-like C2 dom 99.5 8.7E-15 1.9E-19 137.0 5.1 99 231-331 14-118 (133)
466 PRK09605 bifunctional UGMP fam 99.5 9.7E-14 2.1E-18 159.3 14.4 135 381-540 333-477 (535)
467 cd08688 C2_KIAA0528-like C2 do 99.5 9.3E-15 2E-19 132.1 4.6 91 235-332 1-95 (110)
468 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 1.9E-14 4E-19 132.5 5.4 89 235-331 2-92 (121)
469 cd05120 APH_ChoK_like Aminogly 99.5 1.8E-13 3.9E-18 127.6 11.7 134 385-539 2-138 (155)
470 KOG1023 Natriuretic peptide re 99.5 1E-13 2.2E-18 153.6 11.2 197 440-680 4-218 (484)
471 cd08390 C2A_Synaptotagmin-15-1 99.5 2.9E-14 6.2E-19 131.2 4.7 98 231-332 12-112 (123)
472 cd04032 C2_Perforin C2 domain 99.5 5.6E-14 1.2E-18 130.1 6.2 90 231-328 26-116 (127)
473 KOG0590 Checkpoint kinase and 99.5 6.4E-15 1.4E-19 169.6 -1.6 258 380-687 19-291 (601)
474 cd08376 C2B_MCTP_PRT C2 domain 99.5 6.4E-14 1.4E-18 127.6 5.3 89 235-331 2-91 (116)
475 cd04018 C2C_Ferlin C2 domain t 99.4 5.2E-14 1.1E-18 134.2 4.6 94 234-334 1-109 (151)
476 cd08690 C2_Freud-1 C2 domain f 99.4 1.3E-13 2.8E-18 131.6 7.3 96 234-331 5-109 (155)
477 cd04036 C2_cPLA2 C2 domain pre 99.4 7.7E-14 1.7E-18 127.8 5.0 91 235-331 2-93 (119)
478 cd04016 C2_Tollip C2 domain pr 99.4 1.4E-13 3.1E-18 126.4 6.7 86 233-328 2-89 (121)
479 cd04025 C2B_RasA1_RasA4 C2 dom 99.4 1E-13 2.2E-18 127.8 5.4 90 234-331 1-91 (123)
480 cd00276 C2B_Synaptotagmin C2 d 99.4 4.8E-14 1E-18 131.5 3.1 103 231-336 12-116 (134)
481 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.1E-13 2.5E-18 127.4 5.5 99 231-331 13-113 (123)
482 PRK01723 3-deoxy-D-manno-octul 99.4 2.1E-12 4.6E-17 133.0 15.3 133 388-539 38-191 (239)
483 cd04042 C2A_MCTP_PRT C2 domain 99.4 1.3E-13 2.8E-18 126.8 5.5 90 234-331 1-91 (121)
484 cd08686 C2_ABR C2 domain in th 99.4 1.2E-13 2.6E-18 125.0 4.7 80 235-324 1-88 (118)
485 cd04022 C2A_MCTP_PRT_plant C2 99.4 1.3E-13 2.7E-18 128.0 4.8 90 234-330 1-94 (127)
486 cd08379 C2D_MCTP_PRT_plant C2 99.4 1.3E-13 2.8E-18 127.5 4.6 87 235-330 2-98 (126)
487 cd08375 C2_Intersectin C2 doma 99.4 2.7E-13 5.9E-18 127.3 6.1 94 230-331 12-106 (136)
488 cd04026 C2_PKC_alpha_gamma C2 99.4 2.8E-13 6E-18 126.3 5.4 112 233-350 13-125 (131)
489 cd08676 C2A_Munc13-like C2 dom 99.4 2.5E-13 5.3E-18 129.8 5.1 99 231-336 26-149 (153)
490 KOG1030 Predicted Ca2+-depende 99.4 2.8E-13 6.2E-18 127.9 5.4 86 232-326 5-91 (168)
491 cd08374 C2F_Ferlin C2 domain s 99.4 2E-13 4.2E-18 126.9 4.1 91 235-329 2-121 (133)
492 cd04019 C2C_MCTP_PRT_plant C2 99.4 3.7E-13 8.1E-18 128.5 6.0 90 234-331 1-92 (150)
493 cd04033 C2_NEDD4_NEDD4L C2 dom 99.4 3.2E-13 7E-18 126.1 5.2 95 234-332 1-98 (133)
494 cd04024 C2A_Synaptotagmin-like 99.4 6.2E-13 1.3E-17 123.1 6.1 90 233-330 1-93 (128)
495 cd04037 C2E_Ferlin C2 domain f 99.4 5.3E-13 1.1E-17 123.4 5.3 89 235-329 2-91 (124)
496 cd04043 C2_Munc13_fungal C2 do 99.4 9.1E-13 2E-17 121.8 6.3 91 234-329 2-93 (126)
497 cd04054 C2A_Rasal1_RasA4 C2 do 99.3 8.9E-13 1.9E-17 121.3 5.3 87 235-329 2-89 (121)
498 cd04011 C2B_Ferlin C2 domain s 99.3 8.1E-13 1.8E-17 119.6 4.7 89 234-331 5-95 (111)
499 cd08681 C2_fungal_Inn1p-like C 99.3 8.2E-13 1.8E-17 120.7 4.7 90 233-331 1-92 (118)
500 cd04017 C2D_Ferlin C2 domain f 99.3 1.3E-12 2.8E-17 122.6 6.0 86 234-324 2-94 (135)
No 1
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-70 Score=567.68 Aligned_cols=410 Identities=23% Similarity=0.322 Sum_probs=336.1
Q ss_pred CCCCCCcccCCCCc--------ccccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCccccc
Q 005590 216 CSEPLCKCCAGEGK--------INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIE 286 (689)
Q Consensus 216 ~~~~~c~~~~~~~~--------~~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne 286 (689)
+.+++||++|+|+| +..+.|+|.|+|| ||.|||.||.||||||+.|+||++.+.|+||+++|+||||+|||
T Consensus 155 nVPslCG~DhtE~RGrl~l~~~~~~~~l~v~i~ea~NLiPMDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNE 234 (683)
T KOG0696|consen 155 NVPSLCGTDHTERRGRLYLEAHIKRDVLTVTIKEAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNE 234 (683)
T ss_pred cCCcccCCcchhhcceEEEEEEecCceEEEEehhhccccccCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccc
Confidence 47899999999877 4889999999999 99999999999999999999999999999999999999999999
Q ss_pred ccccccccccCccccccccccccCCCCCCCcccccccccccccccccCCCccchhchhhhhhhheee-eeeee-------
Q 005590 287 GFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFH-LRIIH------- 358 (689)
Q Consensus 287 ~f~~~~~~~~~~~~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~~~e~~~~~~~l~~~~l~ee~~~~~-lr~i~------- 358 (689)
+|+|+ +...+.++.|.+.||||||.++|||+|.++++++++.++++.+ |++.|.+++.++. +....
T Consensus 235 tftf~--Lkp~DkdrRlsiEvWDWDrTsRNDFMGslSFgisEl~K~p~~G----WyKlLsqeEGEyyNvp~~~~~~e~~~ 308 (683)
T KOG0696|consen 235 TFTFK--LKPSDKDRRLSIEVWDWDRTSRNDFMGSLSFGISELQKAPVDG----WYKLLSQEEGEYYNVPVPDEDSEDNE 308 (683)
T ss_pred eeEEe--cccccccceeEEEEecccccccccccceecccHHHHhhcchhh----HHHHhhhhcCceeccCCCCchhhHHH
Confidence 99999 9999999999999999999999999999999999999999999 7777777665442 22111
Q ss_pred ------ccccCCc---CC------CCC--cce-eeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--
Q 005590 359 ------RKNRTGF---EE------NKD--LPI-ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-- 418 (689)
Q Consensus 359 ------~~~~~~~---~~------~~~--~pi-~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-- 418 (689)
++.+.+. .+ ... ... ....+-..+|..+.+||+|+||+|.+|..+.+.+.+|||+++++.
T Consensus 309 ~lr~k~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVii 388 (683)
T KOG0696|consen 309 ELRQKFERARIGPGSSKPEKKTMPTDSKFHNSSKRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVII 388 (683)
T ss_pred HHHHHHhhcccCCCcCCCCCCCCCCcccCCCCCcccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceee
Confidence 1111111 00 000 000 011233467999999999999999999999999999999998764
Q ss_pred --hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHH
Q 005590 419 --DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 496 (689)
Q Consensus 419 --~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~Q 496 (689)
+..+..+.|.++|.... ..|++++++.+|+..+.+|+||||+.|+-+-+....-. .+.+..+..++..
T Consensus 389 QdDDvectm~EKrvLAL~~-----kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~G-----kFKEp~AvFYAaE 458 (683)
T KOG0696|consen 389 QDDDVECTMVEKRVLALPG-----KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-----KFKEPVAVFYAAE 458 (683)
T ss_pred ecCcccceehhhhheecCC-----CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhc-----ccCCchhhhhhHH
Confidence 23344555666665444 34799999999999999999999999753333322211 1788889999999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc---cCCccccccCccccChhhhcCCCCCchhhHHHH
Q 005590 497 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSL 573 (689)
Q Consensus 497 Il~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~---~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSL 573 (689)
|+-||-+||++|||+||||.+|||++. .|+|||+|||++... .....+++|||.|+|||++..++|+.++|+||+
T Consensus 459 iaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~ 536 (683)
T KOG0696|consen 459 IAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 536 (683)
T ss_pred HHHHhhhhhcCCeeeeeccccceEecc--CCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHH
Confidence 999999999999999999999999995 899999999998642 334556899999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccC
Q 005590 574 GCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF 653 (689)
Q Consensus 574 Gvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~ 653 (689)
||+||||+.|++||.+.+..++.+.|+.-- ...|. .
T Consensus 537 GVLLyEmlaGQpPFdGeDE~elF~aI~ehn-----------------------------------vsyPK---------s 572 (683)
T KOG0696|consen 537 GVLLYEMLAGQPPFDGEDEDELFQAIMEHN-----------------------------------VSYPK---------S 572 (683)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHcc-----------------------------------CcCcc---------c
Confidence 999999999999999999999999886221 11221 2
Q ss_pred CcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCCCC
Q 005590 654 SDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 687 (689)
Q Consensus 654 ~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf~~ 687 (689)
.+.+++++...+|...|.+|... +++-.||||+.
T Consensus 573 lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 573 LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 34568899999999999999863 67889999975
No 2
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.3e-56 Score=487.21 Aligned_cols=320 Identities=49% Similarity=0.768 Sum_probs=288.6
Q ss_pred CcCCCCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCC
Q 005590 364 GFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 443 (689)
Q Consensus 364 ~~~~~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~ 443 (689)
....++.+.++.++.+..||.|++.||+|+||+|.+|.|..|++.||||++++.+....+...|+++|..|+.....+..
T Consensus 169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999976667778
Q ss_pred ceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 005590 444 HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 523 (689)
Q Consensus 444 ~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~ 523 (689)
|+|+++++|...+|+|||+|.++.+|+++++.++..+ +++..++.|+.||+.||.+||+.||||+||||+||||..
T Consensus 249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~G----lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRG----LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 9999999999999999999999999999999887765 999999999999999999999999999999999999988
Q ss_pred cCCCeEEEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 005590 524 YQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 524 ~~~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~ 603 (689)
.....|||||||+|++.....+.+++++.|+|||+++|.+|+.++||||||||+.||++|.+.|++.+..++++.|++++
T Consensus 325 ~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l 404 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL 404 (586)
T ss_pred CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccc-----------------cccccCC-ccchhhhhcc-CCcHHHHHHHHH
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETN-----------------QLEYIIP-EESSLEHHLQ-FSDAFFIDFVRT 664 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~p-~~~~l~~~~~-~~~~~l~dLI~~ 664 (689)
|.+|..++..+....++|+......+...+.. ......| ....+...+. ..+..|.|||.+
T Consensus 405 G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~ 484 (586)
T KOG0667|consen 405 GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKR 484 (586)
T ss_pred CCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHH
Confidence 99999999999999999987322222111111 2444455 4555555554 456789999999
Q ss_pred hcccCCCCCcCHHHHHcCCCCCC
Q 005590 665 LLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 665 mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
||.+||.+|+|+.|+|+||||+.
T Consensus 485 ~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 485 CLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred HhccCchhcCCHHHHhcCccccc
Confidence 99999999999999999999983
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-49 Score=414.85 Aligned_cols=259 Identities=31% Similarity=0.516 Sum_probs=212.6
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--------hhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--------FFDQSLDEIKLLKLVNKNDPADEHHILRL 448 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--------~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l 448 (689)
..+++.|.+.+.||+|+||.|-+|.++.+|+.||||++.+.+. ......+|++||++|+ ||+||++
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~ 241 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRI 241 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEE
Confidence 3467889999999999999999999999999999999986432 2234568999999886 6899999
Q ss_pred EEEEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc-CC
Q 005590 449 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QR 526 (689)
Q Consensus 449 ~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~-~~ 526 (689)
+++|...+..|+||||++| .|.+.+..+.. +.+..-+.+++||+.||.|||++||+||||||+|||+..+ ++
T Consensus 242 ~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 242 KDFFEVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED 315 (475)
T ss_pred eeeeecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence 9999999999999999995 68887765443 7788889999999999999999999999999999999864 56
Q ss_pred CeEEEEecCCcccccC--CccccccCccccChhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCChHHH-HHHHHH
Q 005590 527 CEIKIIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAVVM-ILARII 600 (689)
Q Consensus 527 ~~vkL~DFGls~~~~~--~~~~~~gt~~Y~APE~l~~~~---~s~~~DIwSLGvil~eLltG~~PF~~~~~~~-~l~~i~ 600 (689)
+.+||+|||+|+..+. -..+.||||.|.|||++.+.. +..++|||||||+||-+|+|.+||....... +..+|.
T Consensus 316 ~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~ 395 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL 395 (475)
T ss_pred eEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh
Confidence 8999999999998854 345689999999999998765 3348899999999999999999997653333 333332
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
+ ..|.+.. .. ....+++.++||..||..||++|||++|+|
T Consensus 396 ~-----------------------------------G~y~f~p--~~---w~~Iseea~dlI~~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 396 K-----------------------------------GRYAFGP--LQ---WDRISEEALDLINWMLVVDPENRPSADEAL 435 (475)
T ss_pred c-----------------------------------CcccccC--hh---hhhhhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence 1 1111110 01 112356789999999999999999999999
Q ss_pred cCCCCCC
Q 005590 681 DHPWLQH 687 (689)
Q Consensus 681 ~hpwf~~ 687 (689)
+||||+.
T Consensus 436 ~hpW~~~ 442 (475)
T KOG0615|consen 436 NHPWFKD 442 (475)
T ss_pred cChhhhc
Confidence 9999983
No 4
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-50 Score=422.63 Aligned_cols=283 Identities=32% Similarity=0.530 Sum_probs=241.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~-~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.+.+||.++++||.|.||.||+|+.+.+|+.||||.+++.- .+ .-.-+||++.|++++ .||||+++.+++.+.
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-----~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----PHPNIIKLKEVIRDN 81 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-----CCCcchhhHHHhhcc
Confidence 34589999999999999999999999999999999987642 11 234457888888776 378999999999988
Q ss_pred C-eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 E-HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~-~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+ ++|+|||||+.+|+++++.+. ..|++..++.|++||++||+|+|++|+.||||||+||||.. ...|||+||
T Consensus 82 ~~~L~fVfE~Md~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDF 154 (538)
T KOG0661|consen 82 DRILYFVFEFMDCNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADF 154 (538)
T ss_pred CceEeeeHHhhhhhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEeccc
Confidence 8 999999999999999998653 34999999999999999999999999999999999999985 678999999
Q ss_pred CCccccc--CCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCFQT--DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~~~--~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
|+|+... ++.+.++.|+||+|||+++. .-|+.++||||+|||++|+.+-++.|++.++.+.+.+|..++|.+..+.|
T Consensus 155 GLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 155 GLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 9998754 45566899999999999875 45899999999999999999999999999999999999999999999988
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCc--cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..+..+.. .+.+.+|. ...+.........++.+||.+||.|||.+||||.|+|+|||||.+
T Consensus 235 ~eg~~La~----------------~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGYNLAS----------------AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hhHHHHHH----------------HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 88755543 22233332 223334444456789999999999999999999999999999965
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-48 Score=423.37 Aligned_cols=251 Identities=32% Similarity=0.544 Sum_probs=224.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~----~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+|...+.||+|||++||.+++..+|+.||+|++.+ .....+...+|++|.+.|+ |||||+++++|++.+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~------HpnIV~f~~~FEDs~ 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK------HPNIVQFYHFFEDSN 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC------CCcEEeeeeEeecCC
Confidence 689999999999999999999999999999999987 3455678888999998885 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.|||+|+|. ++|..+++.. +.++|.+++.+++||+.||.|||+.+|+|||||..|++++. +.+|||+|||
T Consensus 92 nVYivLELC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDFG 163 (592)
T KOG0575|consen 92 NVYIVLELCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDFG 163 (592)
T ss_pred ceEEEEEecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEecccc
Confidence 9999999998 5666666522 23999999999999999999999999999999999999994 8899999999
Q ss_pred Cccccc---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 536 SSCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 536 ls~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
+|.... +...+.||||.|.|||++....++..+||||+|||||-||.|++||+..+..+.+.+|.
T Consensus 164 LAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik------------ 231 (592)
T KOG0575|consen 164 LATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK------------ 231 (592)
T ss_pred eeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH------------
Confidence 998876 45677899999999999999999999999999999999999999999999999998884
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 689 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~~ 689 (689)
..+|.+|.. .+.++++||++||+.||.+|||++++|.|+||.+.|
T Consensus 232 -----------------------~~~Y~~P~~---------ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 232 -----------------------LNEYSMPSH---------LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred -----------------------hcCcccccc---------cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 335666653 235688999999999999999999999999996654
No 6
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.7e-48 Score=388.58 Aligned_cols=279 Identities=27% Similarity=0.447 Sum_probs=234.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|+.+.++|+|+||.||+++++.||+.||||.+... +......++|+++|+.++ |+|+|.++.+|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk------H~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK------HENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHhcce
Confidence 5788999999999999999999999999999998754 334567789999999886 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+++|+|||+.++++.+...... ++...++.+++|++.|+.|+|++++|||||||+||||+ ..+.+||||||+|
T Consensus 76 lhLVFE~~dhTvL~eLe~~p~G-----~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit--~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERYPNG-----VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT--QNGVVKLCDFGFA 148 (396)
T ss_pred eEEEeeecchHHHHHHHhccCC-----CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe--cCCcEEeccchhh
Confidence 9999999999988777655432 88999999999999999999999999999999999999 4899999999999
Q ss_pred cccc---CCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQT---DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~---~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+... +..+.++.|+||+|||.+.+ .+|+.++||||+||++.||++|++.|++.+..+++-.|++.+|++.+.-..
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~- 227 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS- 227 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH-
Confidence 8765 34455789999999999998 689999999999999999999999999999999999999999987764321
Q ss_pred hhhhhhhhhccccchhhhhccccccccCC-ccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIP-EESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
.|. -+....++...-| ....++..+.....-+.||+.+||..||.+|++-+|+|.||+|+
T Consensus 228 ------iF~-------~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 228 ------IFS-------SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred ------Hhc-------cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 111 1111222322222 23344444555556789999999999999999999999999995
No 7
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.8e-47 Score=378.15 Aligned_cols=278 Identities=32% Similarity=0.504 Sum_probs=240.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.||..+++||+|.||.||+|+|..+|+.||||.++..+ .......+|++.|++++ |+||+.++++|-+.+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~------h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK------HPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc------CcchhhhhhhccCCCc
Confidence 57899999999999999999999999999999998643 22457889999999996 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+.||+||++.+|...++... ..++...++.++.++++||+|||.+.|+||||||.|+||++ +|.+||+|||++
T Consensus 76 l~lVfEfm~tdLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLA 148 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLA 148 (318)
T ss_pred eEEEEEeccccHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccch
Confidence 99999999999998887544 34999999999999999999999999999999999999995 899999999999
Q ss_pred ccccCCcc---ccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDNLC---LYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~~~---~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+....... ..+-|++|+|||.+.|. .|+..+||||+|||+.||+-|.+-|++.+..+++..|.+.+|.+.++.|+.
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcc
Confidence 98765432 23679999999999985 599999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+.+|.+-. .+|. ..+...+...+.+..||+.+||..||.+|+|+.|+|+|+||+.
T Consensus 229 ~~~lpdY~~~~---------------~~P~-~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 229 MTSLPDYVKIQ---------------QFPK-PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred ccccccHHHHh---------------cCCC-CccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 88777665411 1111 1112233334566799999999999999999999999999984
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-47 Score=394.17 Aligned_cols=253 Identities=31% Similarity=0.471 Sum_probs=214.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee--cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~--~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
...+.+.++.||+|+.|+||+++|+.|++.+|+|++. .+.....++.+|+++++..+ +|+||.+|+.|.+..
T Consensus 77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~------spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ------SPYIVGFYGAFYSNG 150 (364)
T ss_pred CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC------CCCeeeEeEEEEeCC
Confidence 3456788889999999999999999999999999994 35667789999999999884 679999999999999
Q ss_pred -eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 457 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 457 -~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.++|+||||++ +|..+++..+ .+++..+..|++++++||.|||+ .+||||||||+||||++ .|+|||+|
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicD 222 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICD 222 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEecc
Confidence 59999999996 5555555332 28999999999999999999996 89999999999999996 99999999
Q ss_pred cCCcccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHhhcCCCc
Q 005590 534 LGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-----AVVMILARIIGMLGPID 607 (689)
Q Consensus 534 FGls~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~-----~~~~~l~~i~~~~g~~~ 607 (689)
||.+...... ..+++||..|||||.+.+..|+.++||||||+.++|+.+|+.||... +..+++..|... ++|
T Consensus 223 FGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~--ppP 300 (364)
T KOG0581|consen 223 FGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE--PPP 300 (364)
T ss_pred ccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC--CCC
Confidence 9999876554 46789999999999999999999999999999999999999999764 444555444311 111
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.+|.. ..+++|++||..||+.||.+|||+.|+++|||+++
T Consensus 301 --------------------------------~lP~~--------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 301 --------------------------------RLPEG--------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred --------------------------------CCCcc--------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 11111 24578999999999999999999999999999975
No 9
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-46 Score=399.87 Aligned_cols=281 Identities=29% Similarity=0.475 Sum_probs=240.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..-.+.|+.+++||+|.||.||+|++..+|+.||+|.++.+ ..+.....+||.||++|. ||||++|.+...
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~------HpNIikL~eivt 186 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD------HPNIIKLEEIVT 186 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC------CCcccceeeEEE
Confidence 33456799999999999999999999999999999999865 345667889999999985 689999999998
Q ss_pred eC--CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 454 HL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 454 ~~--~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
.. ..+|+|+|||+.+|.-++.... ..|++.+++.+++||+.||.|||.+||+|||||.+||||+ .+|.+||
T Consensus 187 ~~~~~siYlVFeYMdhDL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid--n~G~LKi 259 (560)
T KOG0600|consen 187 SKLSGSIYLVFEYMDHDLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID--NNGVLKI 259 (560)
T ss_pred ecCCceEEEEEecccchhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc--CCCCEEe
Confidence 77 6899999999999888776433 3399999999999999999999999999999999999999 4899999
Q ss_pred EecCCcccccCC----ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 532 IDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 532 ~DFGls~~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
+|||+|+++... .+..+-|+||+|||.++|. .|+.++|+||+||||.||++|++.|++.+..+++..|.+..|.+
T Consensus 260 aDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP 339 (560)
T KOG0600|consen 260 ADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSP 339 (560)
T ss_pred ccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCC
Confidence 999999976543 4456789999999999986 59999999999999999999999999999999999999999999
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.++.|. ...+.. ........+....+.+.+...++..++|+..||..||.+|.||.++|+|+||
T Consensus 340 ~e~~W~-~~kLP~--------------~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 340 TEDYWP-VSKLPH--------------ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred Chhccc-cccCCc--------------ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 988876 222211 1122223333445555677778889999999999999999999999999999
No 10
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-46 Score=382.62 Aligned_cols=280 Identities=35% Similarity=0.586 Sum_probs=236.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~---~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~- 454 (689)
+..+|..++.||+|+||.|+.|.++.+|+.||||.+.. ......+..+|+++|+.++ |+||+.+++++..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~------HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR------HENIIGLLDIFRPP 93 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc------CCCcceEEeecccc
Confidence 34667778999999999999999999999999998862 3455678889999999886 6799999999975
Q ss_pred ----CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 455 ----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 455 ----~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
-+.+|+|+|+|+.+|...++..+. ++...++.+++||++||+|+|+.+|+||||||.|+|++. +|.+|
T Consensus 94 ~~~~f~DvYiV~elMetDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~--~c~lK 165 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELMETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA--DCDLK 165 (359)
T ss_pred cccccceeEEehhHHhhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc--CCCEE
Confidence 246999999999999988875543 889999999999999999999999999999999999995 89999
Q ss_pred EEecCCccccc-----CCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 531 IIDLGSSCFQT-----DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 531 L~DFGls~~~~-----~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|+|||+|+... ...+.++.|.+|+|||++.. ..|+.++||||+||||.||++|++.|++.+..+++..|+..+|
T Consensus 166 I~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 166 ICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred eccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 99999999873 23456788999999999865 5699999999999999999999999999999999999999999
Q ss_pred CCcHHHHhhhh--hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 605 PIDLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 605 ~~~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.++.+.+.... ....|+... ...| ...+...+...++.+++||.+||..||.+|+|++|+|+|
T Consensus 246 tP~~e~l~~i~s~~ar~yi~sl--------------p~~p-~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSL--------------PQIP-KQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhC--------------CCCC-CCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 99888776543 222232211 1111 123344555667889999999999999999999999999
Q ss_pred CCCCC
Q 005590 683 PWLQH 687 (689)
Q Consensus 683 pwf~~ 687 (689)
|||..
T Consensus 311 PYl~~ 315 (359)
T KOG0660|consen 311 PYLAP 315 (359)
T ss_pred hhhhh
Confidence 99974
No 11
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.1e-46 Score=378.90 Aligned_cols=282 Identities=26% Similarity=0.413 Sum_probs=235.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE--
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-- 453 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~-- 453 (689)
-.+.|+.++.|++|.||.||+|+|+.|++.||+|.++.++ .+.-..++|+.+|..++ ||||+.+-.+..
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~------H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR------HPNIVEVKEVVVGS 147 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC------CCCeeeeEEEEecc
Confidence 3467999999999999999999999999999999998754 24456789999998875 679999998877
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
+.+.+|+|||||+.+|..++..-. ..|...+++.++.|++.||+|||...|+||||||+|+|+. ..|.+||+|
T Consensus 148 ~~d~iy~VMe~~EhDLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~--~~G~lKiaD 220 (419)
T KOG0663|consen 148 NMDKIYIVMEYVEHDLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS--HKGILKIAD 220 (419)
T ss_pred ccceeeeeHHHHHhhHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec--cCCcEEecc
Confidence 446799999999999999887544 2399999999999999999999999999999999999999 489999999
Q ss_pred cCCcccccCC---ccccccCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 534 LGSSCFQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 534 FGls~~~~~~---~~~~~gt~~Y~APE~l~~~~-~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
||+|+.++.+ .+..+-|.+|+|||.+++.+ |+.++|+||+|||+.||+++++.|++.+..+++.+|...+|.+.+.
T Consensus 221 FGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 221 FGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred cchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 9999998877 44467799999999999865 9999999999999999999999999999999999999999999988
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCC--cHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS--DAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~--~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|+.-......- .....-....++...+... ++...+|++++|.+||.+|+||.|+|+|+||..
T Consensus 301 iwpg~~~lp~~k--------------~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 301 IWPGYSELPAVK--------------KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred cCCCccccchhh--------------ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 887644332110 0000111112222222222 366789999999999999999999999999986
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=382.96 Aligned_cols=251 Identities=29% Similarity=0.483 Sum_probs=216.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|+++++||+|+||+|++++.+.+++.+|+|++++.. ...+...+|..||..+ .||+|++++..|++.
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v------~hPFiv~l~ysFQt~ 97 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI------KHPFIVKLIYSFQTE 97 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC------CCCcEeeeEEecccC
Confidence 578999999999999999999999999999999998743 3456777888888875 478999999999999
Q ss_pred CeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+++|+|+||+.|+ |.-.+.... .|++..++.++..|+.||.|||++|||||||||+|||++ ..|+|+|+||
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg------~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd--~~GHi~LtDF 169 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREG------RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD--EQGHIKLTDF 169 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcC------CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec--CCCcEEEecc
Confidence 9999999999974 544443222 299999999999999999999999999999999999999 5999999999
Q ss_pred CCcccc---cCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~~---~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
|+++.. ++...++|||+.|||||++.+.+|+.++|+||||+++|+|++|.+||.+.+...+..+|.+...+.+
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~---- 245 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP---- 245 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC----
Confidence 999753 3345568999999999999999999999999999999999999999999999888888863321111
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc----CHHHHHcCCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP----TAREALDHPWLQH 687 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp----Ta~ElL~hpwf~~ 687 (689)
....+.++++||+++|..||++|. .+.++-+||||..
T Consensus 246 ---------------------------------------p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 246 ---------------------------------------PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred ---------------------------------------CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 112356789999999999999996 7999999999975
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-45 Score=389.82 Aligned_cols=250 Identities=30% Similarity=0.489 Sum_probs=221.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+|...+.||.|+|++|++|+++.+++.||||++.+.- .-.+...+|..+|..|. .||.|++|+..|++..
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDEE 147 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeeccc
Confidence 67999999999999999999999999999999987532 22356677888898886 5899999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+|+|+||+. |+|+++++..+. |.+..++.++.||+.||+|||++|||||||||+|||++. +++++|+|||
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~--dmhikITDFG 219 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK--DGHIKITDFG 219 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC--CCcEEEeecc
Confidence 9999999998 689999886643 899999999999999999999999999999999999994 9999999999
Q ss_pred CcccccCC----------------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHH
Q 005590 536 SSCFQTDN----------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARI 599 (689)
Q Consensus 536 ls~~~~~~----------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i 599 (689)
.|..+.+. .+.++||..|.+||++.....+..+|||+||||||+|+.|.+||.+.++..++++|
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI 299 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI 299 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98754321 24589999999999999999999999999999999999999999999999999998
Q ss_pred HhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHH
Q 005590 600 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 679 (689)
Q Consensus 600 ~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~El 679 (689)
+ .+.+.+|+.. ++.+++||+++|..||++|+|++||
T Consensus 300 ~-----------------------------------~l~y~fp~~f---------p~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 300 Q-----------------------------------ALDYEFPEGF---------PEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred H-----------------------------------HhcccCCCCC---------CHHHHHHHHHHHccCccccccHHHH
Confidence 7 3455555432 3568899999999999999999999
Q ss_pred HcCCCCCC
Q 005590 680 LDHPWLQH 687 (689)
Q Consensus 680 L~hpwf~~ 687 (689)
-+||||..
T Consensus 336 k~HpFF~~ 343 (604)
T KOG0592|consen 336 KAHPFFEG 343 (604)
T ss_pred hhCccccc
Confidence 99999975
No 14
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=378.69 Aligned_cols=314 Identities=35% Similarity=0.602 Sum_probs=259.4
Q ss_pred CCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005590 369 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 448 (689)
Q Consensus 369 ~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l 448 (689)
+.+-...++.+.+||.|+.+||+|.||+|..+.|..++..|||||++.-....+..+-|+++|++++...+..---++++
T Consensus 77 GH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m 156 (415)
T KOG0671|consen 77 GHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQM 156 (415)
T ss_pred ceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence 44556788999999999999999999999999999999999999998766667788899999999988776666678899
Q ss_pred EEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc----
Q 005590 449 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY---- 524 (689)
Q Consensus 449 ~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~---- 524 (689)
.++|...+|.|||+|.++-++++++..+.... ++...++.|++||+++++|||+.+++|.||||+|||+.+.
T Consensus 157 ~~wFdyrghiCivfellG~S~~dFlk~N~y~~----fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 157 RDWFDYRGHICIVFELLGLSTFDFLKENNYIP----FPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred ehhhhccCceEEEEeccChhHHHHhccCCccc----cchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence 99999999999999999989999998766543 9999999999999999999999999999999999998531
Q ss_pred --------------CCCeEEEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005590 525 --------------QRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 590 (689)
Q Consensus 525 --------------~~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~ 590 (689)
....|+|+|||.|.+........+.|..|+|||++++.+|+.+.||||+||||+|+.+|...|+..
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 134689999999999888888889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhcc-ccccccCCccchhhhhccC---CcHHHHHHHHHhc
Q 005590 591 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEET-NQLEYIIPEESSLEHHLQF---SDAFFIDFVRTLL 666 (689)
Q Consensus 591 ~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~l~~~~~~---~~~~l~dLI~~mL 666 (689)
...+.++.|..++||+|..|..+.. ..++|... ...+...-. .+..+.......+...... ....+.|||++||
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 8999999999999999999988764 33344322 111111100 1111221111112111111 2246899999999
Q ss_pred ccCCCCCcCHHHHHcCCCCCCC
Q 005590 667 EINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 667 ~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..||.+|+|+.|+|.||||...
T Consensus 391 ~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 391 EFDPARRITLREALSHPFFARL 412 (415)
T ss_pred ccCccccccHHHHhcCHHhhcC
Confidence 9999999999999999999763
No 15
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.2e-43 Score=395.94 Aligned_cols=299 Identities=29% Similarity=0.493 Sum_probs=235.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-CeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~-~~l 458 (689)
.++|+++++||+|+||+||+|++..+++.||||+++...........|+.+++.+++.+...|.+|++++++|... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 5789999999999999999999999999999999976544455667899999999888777888999999998865 589
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccC------------
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQ------------ 525 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~------------ 525 (689)
++|||+++++|++++.... .+++..++.|+.||+.||.|||+ .|||||||||+|||++..+
T Consensus 208 ~iv~~~~g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEEeccCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 9999999888888776432 28899999999999999999998 5999999999999998532
Q ss_pred --CCeEEEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 005590 526 --RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 526 --~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~ 603 (689)
.+.+||+|||.+..........+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+...+
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 235999999998766555666789999999999999999999999999999999999999999998889999999999
Q ss_pred CCCcHHHHhhhh--hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 604 GPIDLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 604 g~~~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
|.+|.++..... ....++........... ...+.. +........ ...++.+.+||.+||++||.+|||++|+|+
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~--~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTD-PKHLAR-IARARPVRE--VIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCC-HHHHHh-hhcccchhh--hhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 999987765321 11112211110000000 000000 000000000 112466889999999999999999999999
Q ss_pred CCCCCCC
Q 005590 682 HPWLQHP 688 (689)
Q Consensus 682 hpwf~~~ 688 (689)
||||++-
T Consensus 438 Hp~~~~~ 444 (467)
T PTZ00284 438 HPYVLKY 444 (467)
T ss_pred Ccccccc
Confidence 9999874
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=360.43 Aligned_cols=249 Identities=27% Similarity=0.499 Sum_probs=221.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||.|+||+|.+++++.+|..+|+|++.+.+ .+.+...+|..+|+.+. ||+++++++.|.+..
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~------~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS------HPFLVKLYGTFKDNS 117 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc------CceeEEEEEeeccCC
Confidence 68999999999999999999999999999999998753 34566777888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++|+||||++| .|..+++..++ |++..++.++.||+.||+|||+++|++|||||+||||++ +|.+||+|||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDFG 189 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFG 189 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEecc
Confidence 99999999996 57777775544 999999999999999999999999999999999999995 9999999999
Q ss_pred CcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 536 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 536 ls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
+|........+.||||.|+|||++...+|..++|+|||||++|||+.|.+||.+.+...+..+|...
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------------- 256 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------------- 256 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC-------------
Confidence 9999988888899999999999999999999999999999999999999999999998888888632
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCC-----cCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR-----PTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR-----pTa~ElL~hpwf~~ 687 (689)
...+|. ..+..+++||.++|+.|-.+| ....++-.||||..
T Consensus 257 ----------------------~v~fP~---------~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 257 ----------------------KVKFPS---------YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred ----------------------cccCCc---------ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 223332 234668999999999999999 35778999999975
No 17
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=371.46 Aligned_cols=277 Identities=32% Similarity=0.534 Sum_probs=229.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC----
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---- 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~---- 456 (689)
-.|.-.+++|+|+||.||+|+...+++.||||..-.++. ---+|+++|+.+ +||||+++..+|....
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l------~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKL------DHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhc------CCcCeeeEEEEEEecCCCch
Confidence 358889999999999999999999999999999887764 334789999855 6889999999997432
Q ss_pred -eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 -HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 -~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++.+|||||+.+|.+.++..... +..++...++.+.+||++||.|||+.||+||||||.|+|++. ++|.+||+|||
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFG 171 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFG 171 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCC
Confidence 56789999999999998864222 223888899999999999999999999999999999999997 68999999999
Q ss_pred Cccccc--CCccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 536 SSCFQT--DNLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 536 ls~~~~--~~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
+|+... .+...+.-|+.|+|||.+.+. .|+.++||||.||++.||+-|++.|++.+..+++..|++++|.++.+.+.
T Consensus 172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 998754 334557789999999999986 59999999999999999999999999999999999999999999988876
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccch--h-hhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS--L-EHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--l-~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.....+. ....|.... . .-.....++++.+|+.++|+++|.+|.++.|+|.||||+.
T Consensus 252 ~mn~~y~------------------~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 252 SMNPNYT------------------EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred hcCcccc------------------cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 5543221 111111000 0 1123345788999999999999999999999999999974
No 18
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=5.5e-45 Score=387.40 Aligned_cols=317 Identities=33% Similarity=0.587 Sum_probs=273.2
Q ss_pred CCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005590 368 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 447 (689)
Q Consensus 368 ~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~ 447 (689)
.+++.+.+++++.+||.|....|+|-||+|..|.|...|..|||||+++...-...-++|++||++|+...+-+-.|+++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 56788999999999999999999999999999999999999999999998877788899999999999988888889999
Q ss_pred EEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCC
Q 005590 448 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 527 (689)
Q Consensus 448 l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~ 527 (689)
++..|.+.+|+|+|+|-+.-+|.++++..+... -|.+..++.++.|+.-||..|-.+||+|.||||+||||+. ...
T Consensus 499 l~r~F~hknHLClVFE~LslNLRevLKKyG~nv---GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE-~k~ 574 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNV---GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE-SKN 574 (752)
T ss_pred HHHHhhhcceeEEEehhhhchHHHHHHHhCccc---ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc-Ccc
Confidence 999999999999999999999999988665433 3889999999999999999999999999999999999986 566
Q ss_pred eEEEEecCCcccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 528 EIKIIDLGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 528 ~vkL~DFGls~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
.+||||||.|...+++ .+.+.-+..|+|||+++|.+|+...|+||+||+||||.||+..|++.+...++..++.+.|++
T Consensus 575 iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~ 654 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKF 654 (752)
T ss_pred eeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCC
Confidence 8999999999887665 455677889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhcc-------ccccccCCc---------cchhhhhccCCcHHHHHHHHHhcccCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEET-------NQLEYIIPE---------ESSLEHHLQFSDAFFIDFVRTLLEINP 670 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~p~---------~~~l~~~~~~~~~~l~dLI~~mL~~dP 670 (689)
|..|+.+++...+.|+....+++..... ..+...-|. ...++......-..|++||.+||..||
T Consensus 655 p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP 734 (752)
T KOG0670|consen 655 PNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDP 734 (752)
T ss_pred cHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccCh
Confidence 9999999999988888877666532211 111111221 111111111112468999999999999
Q ss_pred CCCcCHHHHHcCCCCCCC
Q 005590 671 QRRPTAREALDHPWLQHP 688 (689)
Q Consensus 671 ~kRpTa~ElL~hpwf~~~ 688 (689)
++|+|..++|+||||+.+
T Consensus 735 ~KRit~nqAL~HpFi~~k 752 (752)
T KOG0670|consen 735 EKRITVNQALKHPFITEK 752 (752)
T ss_pred hhcCCHHHHhcCCcccCC
Confidence 999999999999999863
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=380.89 Aligned_cols=255 Identities=32% Similarity=0.509 Sum_probs=219.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----h--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
...++|.+.+.||+|+||+|++|++..+++.||+|++.+. . .....+.+|+.+++.+++ ||||++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~-----HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS-----HPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc-----CCCEeEEEEE
Confidence 4568999999999999999999999999999999987664 1 234566689989988863 6799999999
Q ss_pred EEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 452 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 452 f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
+....++++||||+.| .|++++.... .+.+..++.+++||+.|++|||++||+||||||+|||++.+. +.+|
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~K 161 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLK 161 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEE
Confidence 9999999999999995 8998887532 288999999999999999999999999999999999999632 8999
Q ss_pred EEecCCcccc---cCCccccccCccccChhhhcCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 531 IIDLGSSCFQ---TDNLCLYVQSRSYRAPEVIIGLP-YD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 531 L~DFGls~~~---~~~~~~~~gt~~Y~APE~l~~~~-~s-~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
|+|||++... .....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+...+...|.
T Consensus 162 l~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~----- 236 (370)
T KOG0583|consen 162 LSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIR----- 236 (370)
T ss_pred EeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHh-----
Confidence 9999999876 34567789999999999999988 87 78999999999999999999999877777776653
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...+.+|.... ++++++||++||..||.+|+|+.+++.||||
T Consensus 237 ------------------------------~~~~~~p~~~~--------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~ 278 (370)
T KOG0583|consen 237 ------------------------------KGEFKIPSYLL--------SPEARSLIEKMLVPDPSTRITLLEILEHPWF 278 (370)
T ss_pred ------------------------------cCCccCCCCcC--------CHHHHHHHHHHcCCCcccCCCHHHHhhChhh
Confidence 22334444321 4668899999999999999999999999999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
+.
T Consensus 279 ~~ 280 (370)
T KOG0583|consen 279 QK 280 (370)
T ss_pred cc
Confidence 96
No 20
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=371.47 Aligned_cols=319 Identities=35% Similarity=0.615 Sum_probs=272.5
Q ss_pred cccCCcCCCCCcceeeCceec-CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccC
Q 005590 360 KNRTGFEENKDLPIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 438 (689)
Q Consensus 360 ~~~~~~~~~~~~pi~~~~~l~-~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~ 438 (689)
+....|..++++|+.++++++ +||.+.++||-|.|++||+|.|....+.||+|+.+......+..+.||++|+.++...
T Consensus 56 E~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 56 EDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred cChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence 345677889999999999999 9999999999999999999999999999999999988777889999999999998865
Q ss_pred --CCCCCceeEEEEEEEeC----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCcee
Q 005590 439 --PADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIH 511 (689)
Q Consensus 439 --~~~h~~Iv~l~~~f~~~----~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvH 511 (689)
.....+||++++.|... .|+|+|+|+++.+|+.++......+ ++...++.|++||+.||.|||. +||||
T Consensus 136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrG----lpl~~VK~I~~qvL~GLdYLH~ecgIIH 211 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRG----LPLSCVKEICRQVLTGLDYLHRECGIIH 211 (590)
T ss_pred CCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 44566999999999854 5999999999999999999887765 9999999999999999999996 59999
Q ss_pred ccCCCCcEEEec--------------------------------------------------------------------
Q 005590 512 CDLKPENILIKS-------------------------------------------------------------------- 523 (689)
Q Consensus 512 rDLKp~NILl~~-------------------------------------------------------------------- 523 (689)
-||||+|||+..
T Consensus 212 TDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~ 291 (590)
T KOG1290|consen 212 TDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGL 291 (590)
T ss_pred cCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccc
Confidence 999999999840
Q ss_pred ----------------------------------------------c---------------------------------
Q 005590 524 ----------------------------------------------Y--------------------------------- 524 (689)
Q Consensus 524 ----------------------------------------------~--------------------------------- 524 (689)
.
T Consensus 292 ~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~ 371 (590)
T KOG1290|consen 292 EGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSP 371 (590)
T ss_pred ccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCc
Confidence 0
Q ss_pred -----------------CCCeEEEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005590 525 -----------------QRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLF 587 (689)
Q Consensus 525 -----------------~~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF 587 (689)
.+..|||+|||.|++.....+.-.+|+.|+|||++.+.+|+..+||||++|++|||+||..+|
T Consensus 372 ~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLF 451 (590)
T KOG1290|consen 372 GTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLF 451 (590)
T ss_pred cccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceee
Confidence 001478999999999888888888999999999999999999999999999999999999999
Q ss_pred CC------ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCc---HHH
Q 005590 588 PN------DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSD---AFF 658 (689)
Q Consensus 588 ~~------~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~---~~l 658 (689)
.. ...++.++.|+..+|.+|......+....+||++......... +.++ |-...+.+-+.+.. .+|
T Consensus 452 ePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~----LK~W-pL~~VL~eKY~~s~e~A~~f 526 (590)
T KOG1290|consen 452 EPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRR----LKPW-PLYEVLIEKYEWSEEDAQQF 526 (590)
T ss_pred cCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccc----cCCC-cHHHHHHHHhCCCHHHHHHH
Confidence 53 4667899999999999999999999999999988766543322 1111 11122233333332 468
Q ss_pred HHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 659 IDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 659 ~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.+||.-||+.+|++||||.++|+||||..
T Consensus 527 sdFL~PmLef~PeKR~tA~~cl~hPwLn~ 555 (590)
T KOG1290|consen 527 SDFLSPMLEFDPEKRPTAAQCLKHPWLNP 555 (590)
T ss_pred HHHHHHHHhcCccccccHHHHhcCccccC
Confidence 99999999999999999999999999973
No 21
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-42 Score=365.28 Aligned_cols=276 Identities=29% Similarity=0.440 Sum_probs=224.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.++||.|+||+||+|++..+++.||+|+++... .......+|+.+++.++ |+||+++++++...+..
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 78 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK------HANIVTLHDIIHTERCL 78 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC------CCCEeeEEEEEcCCCeE
Confidence 57999999999999999999999999999999987532 22345668888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++|.+++..... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~ 151 (288)
T cd07871 79 TLVFEYLDSDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLAR 151 (288)
T ss_pred EEEEeCCCcCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCccee
Confidence 99999999988887754322 2788899999999999999999999999999999999984 7889999999986
Q ss_pred cccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++.+.|...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 152 AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred eccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcc
Confidence 54322 223567899999999876 56899999999999999999999999999999999999999998888877654
Q ss_pred hhhhhhhhccccchhhhhccccccccCCc--cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+.. ..+|. ...........+.++++||++||++||.+|||++|+|+||||
T Consensus 232 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFRS----------------YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhhc----------------cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 32221111 00110 011112223346778999999999999999999999999998
No 22
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-43 Score=365.81 Aligned_cols=284 Identities=32% Similarity=0.490 Sum_probs=236.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC-
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE- 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~- 456 (689)
..|..+++||+|+||+||+|+++.+|+.||+|.++.+.. ......+|+-+|+.+++.+ ||+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~-----~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN-----HIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc-----ceEEEEeeeeeccc
Confidence 457777889999999999999999999999999987543 4567789999999998653 2999999999877
Q ss_pred -----eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 457 -----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 457 -----~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
.+++|+||++-+|..++....... ..++...++.+++||+.||.|||+.||+||||||.||||++ .|.+||
T Consensus 86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKl 161 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLKL 161 (323)
T ss_pred ccccceEEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEee
Confidence 899999999999999988765432 22667899999999999999999999999999999999995 899999
Q ss_pred EecCCcccccC---CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 532 IDLGSSCFQTD---NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 532 ~DFGls~~~~~---~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
+|||+|+...- ..+..+.|.+|+|||++.+. .|+..+||||+|||+.||+++++.|++.+..+++.+|...+|.+.
T Consensus 162 aDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 162 ADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred eccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 99999986552 23456889999999999987 699999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
++.|+......+|-.. +. ..+....+.......++...+++.+||+.+|.+|+||..+|+||||+.
T Consensus 242 e~~Wp~v~~~~~~k~~----f~----------~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAP----FP----------KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred ccCCCCcccccccccc----Cc----------CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 9888775544332110 00 001112223333334467889999999999999999999999999985
No 23
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=386.95 Aligned_cols=253 Identities=27% Similarity=0.467 Sum_probs=220.7
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
+--++|+++++||+|+||+|+++..+.+++.+|||+++++ .+..+..+.|.+|+...+ .||++++++.+|+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPFL~~L~~~fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPFLVNLFSCFQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCeEeecccccc
Confidence 3347899999999999999999999999999999999985 355678888999998886 5999999999999
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
+.+|+|+||||+.|+. ++...+ ...|++.+++.++..|+.||+|||++||||||||.+|||++. .|++||+|
T Consensus 440 T~~~l~fvmey~~Ggd--m~~~~~----~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~kiAD 511 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGD--LMHHIH----TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKIAD 511 (694)
T ss_pred cCCeEEEEEEecCCCc--EEEEEe----cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEecc
Confidence 9999999999999865 222111 123999999999999999999999999999999999999995 89999999
Q ss_pred cCCccc---ccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 534 LGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 534 FGls~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
||+++. .+....++||||.|+|||++.+..|+.++|+|||||+|||||.|+.||++++..++...|+..
T Consensus 512 FGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-------- 583 (694)
T KOG0694|consen 512 FGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-------- 583 (694)
T ss_pred cccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------
Confidence 999875 345667899999999999999999999999999999999999999999999999999888611
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWL 685 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf 685 (689)
+...| .+++.+++++|+++|..||++|.-+ .++.+||||
T Consensus 584 ---------------------------~~~yP---------~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFF 627 (694)
T KOG0694|consen 584 ---------------------------EVRYP---------RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFF 627 (694)
T ss_pred ---------------------------CCCCC---------CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCcc
Confidence 12223 2345678899999999999999985 778899999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
+.
T Consensus 628 r~ 629 (694)
T KOG0694|consen 628 RS 629 (694)
T ss_pred cc
Confidence 85
No 24
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=363.92 Aligned_cols=255 Identities=30% Similarity=0.489 Sum_probs=213.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.++|.+.+.||+|+||+||+|+++.++..||||.+.+. +...+....|+.+|+.++ |||||+++++....+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~------H~nIV~l~d~~~~~~ 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK------HPNIVRLLDCIEDDD 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC------CcceeeEEEEEecCC
Confidence 47899999999999999999999999999999998764 345667789999999996 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc-CC---CeEEE
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QR---CEIKI 531 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~-~~---~~vkL 531 (689)
.+|+|||||. |+|..++..... +++..++.++.||+.||++||+++||||||||+||||+.. .. ..+||
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKI 156 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKI 156 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEe
Confidence 9999999999 578888775542 8999999999999999999999999999999999999863 22 57999
Q ss_pred EecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 532 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 532 ~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+|||+|+..... ..+.||++-|||||++..+.|+.|+|+||+|+|+|+|++|+.||...+..+++..+.+.-.
T Consensus 157 ADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~----- 231 (429)
T KOG0595|consen 157 ADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE----- 231 (429)
T ss_pred cccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc-----
Confidence 999999987653 4568999999999999999999999999999999999999999999998888876531111
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+...++... .....+|+...|+.+|..|.+..+-+.|+++..
T Consensus 232 ---------------------------~~~~~~~~~---------s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 232 ---------------------------IVPVLPAEL---------SNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ---------------------------ccCchhhhc---------cCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 111111111 122447888888888888888888888887754
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.5e-43 Score=375.28 Aligned_cols=253 Identities=29% Similarity=0.463 Sum_probs=211.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|.+++.||+|+||.||+|+.+.||..+|+|++++.. ........|-.+|... +.+.||++|..|++.
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~------ds~~vVKLyYsFQD~ 213 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV------DSPWVVKLYYSFQDK 213 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc------CCCcEEEEEEEecCC
Confidence 478999999999999999999999999999999998753 3455666677777664 357999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+++||||||++| ++..++.... .|++..++.++.+++.|+..||+.|+|||||||+|+||+. .|+|||+||
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDF 285 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDF 285 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC--CCCEeeccc
Confidence 999999999996 5666655333 2999999999999999999999999999999999999994 999999999
Q ss_pred CCccccc------------------------C-C-------------------------ccccccCccccChhhhcCCCC
Q 005590 535 GSSCFQT------------------------D-N-------------------------LCLYVQSRSYRAPEVIIGLPY 564 (689)
Q Consensus 535 Gls~~~~------------------------~-~-------------------------~~~~~gt~~Y~APE~l~~~~~ 564 (689)
|++.-.. + . ....+|||.|+|||++.+.+|
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 9862100 0 0 001489999999999999999
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCcc
Q 005590 565 DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE 644 (689)
Q Consensus 565 s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 644 (689)
+...|+||||||+||||.|.+||.++++.+...+|+ .|.. ...+|..
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~------------nwr~---------------------~l~fP~~ 412 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIV------------NWRE---------------------TLKFPEE 412 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------HHhh---------------------hccCCCc
Confidence 999999999999999999999999999999999986 1111 1223322
Q ss_pred chhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHHHHcCCCCCC
Q 005590 645 SSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 687 (689)
Q Consensus 645 ~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~hpwf~~ 687 (689)
... ..+++|||.+||. ||.+|.- ++|+-+||||+.
T Consensus 413 ~~~-------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 413 VDL-------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred Ccc-------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence 222 2668999999999 9999996 999999999986
No 26
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-43 Score=382.55 Aligned_cols=249 Identities=31% Similarity=0.520 Sum_probs=219.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
+-|++.+.||.|+-|.|.+|++..||+.+|||++.+. ......+.+|+-||+.+. ||||+++|++++...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~------HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE------HPNVLRLYDVWENKQ 85 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc------CCCeeeeeeeeccCc
Confidence 5699999999999999999999999999999999875 234567889999999986 679999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++|+|.||+. |.|++++...+. +++.++..++.||+.|+.|+|..+|+||||||+|+|++. .+.|||+|||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~--~~nIKIADFG 157 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV--KNNIKIADFG 157 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc--ccCEeeeccc
Confidence 9999999998 568888875543 899999999999999999999999999999999999995 5559999999
Q ss_pred CcccccC--CccccccCccccChhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 536 SSCFQTD--NLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 536 ls~~~~~--~~~~~~gt~~Y~APE~l~~~~~s-~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
+|..... -..+.||+|.|.|||++.|.+|+ .++||||.|||||.||+|.+||.+++...++.++.
T Consensus 158 MAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~------------ 225 (786)
T KOG0588|consen 158 MASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ------------ 225 (786)
T ss_pred eeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH------------
Confidence 9977544 35668999999999999999987 78999999999999999999999999888888774
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+.+|. ..+.++++||++||+.||.+|+|.+|+++|||+++
T Consensus 226 -----------------------~G~f~MPs---------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 226 -----------------------RGVFEMPS---------NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred -----------------------cCcccCCC---------cCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 22333442 34567899999999999999999999999999975
No 27
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.7e-42 Score=358.59 Aligned_cols=276 Identities=28% Similarity=0.501 Sum_probs=222.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.+.||+|+||+||++++..+++.||+|++.... .......+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK------QENIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC------CccccchhhhEecCCE
Confidence 47999999999999999999999999999999987542 23455677888887774 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+.+++++.+.... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~ 147 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFA 147 (287)
T ss_pred EEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCc
Confidence 99999999988777654322 23889999999999999999999999999999999999984 788999999998
Q ss_pred ccccCC----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
...... .....+++.|+|||++.+..++.++|+|||||++|+|++|++||++.+..+.+..+....++++.+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 765332 2235689999999999998999999999999999999999999999888888888888888888766543
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCcc----chhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEE----SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+. . ...|.. ..........+..+++||++||+.||++|||++|+|+||||
T Consensus 228 ~~~~~~~~--------------~--~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRFH--------------G--LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchhc--------------c--cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 21110000 0 000100 00111122346779999999999999999999999999998
No 28
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-41 Score=360.69 Aligned_cols=281 Identities=26% Similarity=0.406 Sum_probs=218.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.++|++.+.||+|+||+||+|++..+++.||+|++.... .......+|+.+++.++ |+||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~ 77 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK------HANIVLLHDIIHTKET 77 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC------CCCcCeEEEEEecCCe
Confidence 368999999999999999999999999999999987532 22335667888888774 7899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+.+++.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~ 150 (303)
T cd07869 78 LTLVFEYVHTDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLA 150 (303)
T ss_pred EEEEEECCCcCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcc
Confidence 99999999999888776432 12788899999999999999999999999999999999984 788999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
...... .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+. +..+.+..+...++.+....|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 654322 2335678999999998764 5889999999999999999999999864 4556677777777776665554
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhc--cCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHL--QFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~--~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.......+.... .....|. .+.... ......+.+||++||+.||++|||+.|+|+||||++
T Consensus 231 ~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 231 GVHSLPHFKPER------------FTLYSPK--NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred chhhcccccccc------------ccccCCc--cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence 433221111000 0000010 000000 012356889999999999999999999999999986
No 29
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.5e-41 Score=354.77 Aligned_cols=279 Identities=28% Similarity=0.449 Sum_probs=219.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~-tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~-- 454 (689)
++|++.+.||+|+||+||+|++.. +++.||+|+++... .......+|+.+++.+.. ..||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~hpniv~~~~~~~~~~ 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVSR 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc---cCCCCcceEEEEEeccc
Confidence 479999999999999999999854 57889999987532 223355678888777753 468999999999862
Q ss_pred ---CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 455 ---LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 455 ---~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
...+++||||+.++|.+++..... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||
T Consensus 78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl 151 (290)
T cd07862 78 TDRETKLTLVFEHVDQDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKL 151 (290)
T ss_pred CCCCCcEEEEEccCCCCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEE
Confidence 356899999999998888764322 23889999999999999999999999999999999999984 788999
Q ss_pred EecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 532 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 532 ~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|.+||.+....+.+..+....+.+..+
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred ccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999998765432 234568999999999999899999999999999999999999999998888888888877766555
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.+......... .+.. .+ ...+.......+..+++||.+||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~---------------~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 232 DWPRDVALPRQ---------------AFHS-KS-AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hchhhhcccch---------------hccC-CC-CCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 44332211100 0000 00 011111222346778999999999999999999999999998
No 30
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.7e-41 Score=365.89 Aligned_cols=298 Identities=31% Similarity=0.509 Sum_probs=227.2
Q ss_pred CcceeeCc---eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005590 370 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 443 (689)
Q Consensus 370 ~~pi~~~~---~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~ 443 (689)
.+++..++ .+.++|++.+.||+|+||.||++++..+|+.||+|++... ........+|+.+++.+ .||
T Consensus 7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~ 80 (359)
T cd07876 7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV------NHK 80 (359)
T ss_pred cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC------CCC
Confidence 34444443 4568999999999999999999999999999999998643 22345566788777766 478
Q ss_pred ceeEEEEEEEeCC------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 005590 444 HILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 517 (689)
Q Consensus 444 ~Iv~l~~~f~~~~------~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~ 517 (689)
||+++++++.... ..++||||+++++...+.. .+++..+..++.||+.||.|||+.||+||||||+
T Consensus 81 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~ 152 (359)
T cd07876 81 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 152 (359)
T ss_pred CEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 9999999987543 5799999999988776531 1788899999999999999999999999999999
Q ss_pred cEEEeccCCCeEEEEecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 595 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~ 595 (689)
|||++. ++.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 153 NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~ 230 (359)
T cd07876 153 NIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 230 (359)
T ss_pred HEEECC--CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999985 788999999998754332 2335789999999999999999999999999999999999999999888888
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccc--hhhhhccCCcHHHHHHHHHhcccCCCCC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRR 673 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~l~~~~~~~~~~l~dLI~~mL~~dP~kR 673 (689)
+..+...++.++.+.+.........+......... ......++... .........+..+++||.+||+.||++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 306 (359)
T cd07876 231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG----ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR 306 (359)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC----cchhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence 88888888887776655433222211111000000 00011111100 0011112335678999999999999999
Q ss_pred cCHHHHHcCCCCCC
Q 005590 674 PTAREALDHPWLQH 687 (689)
Q Consensus 674 pTa~ElL~hpwf~~ 687 (689)
||+.|+|+||||+.
T Consensus 307 ~t~~e~l~hp~~~~ 320 (359)
T cd07876 307 ISVDEALRHPYITV 320 (359)
T ss_pred CCHHHHhcCchhhh
Confidence 99999999999974
No 31
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.3e-41 Score=360.76 Aligned_cols=277 Identities=33% Similarity=0.565 Sum_probs=220.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
+|++.++||+|+||.||+|++..+++.||||++... ......+.+|+++++.++ ||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR------HPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC------CCCEeeecceEeccCCC
Confidence 699999999999999999999999999999998642 223345678888888774 78999999988643
Q ss_pred --CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 456 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 456 --~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
..+++||||++++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~D 146 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICD 146 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEcc
Confidence 3589999999988888775432 2889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCC------ccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 534 LGSSCFQTDN------LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 534 FGls~~~~~~------~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
||++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 226 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 9998753221 123578999999999876 57899999999999999999999999998888888888888888
Q ss_pred CcHHHHhhhhhh--hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCC
Q 005590 606 IDLEMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 683 (689)
Q Consensus 606 ~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hp 683 (689)
++...+...... ..++. .+....+ ..........++.+.+||.+||+.||++|||+.|+|+||
T Consensus 227 ~~~~~~~~i~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 227 PSPETISRVRNEKARRYLS-------------SMRKKQP--VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred CCHHHHHHhhhhhHHHHHH-------------hhcccCC--CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 877765543221 11111 0111111 112222233457789999999999999999999999999
Q ss_pred CCCC
Q 005590 684 WLQH 687 (689)
Q Consensus 684 wf~~ 687 (689)
||+.
T Consensus 292 ~f~~ 295 (338)
T cd07859 292 YFKG 295 (338)
T ss_pred hhhh
Confidence 9975
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=347.18 Aligned_cols=259 Identities=30% Similarity=0.453 Sum_probs=219.2
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+.+.|.+.+.||+|.|+.|+++.+..+|+.+|+|++... ....+.+.+|++|.+.|+ ||||+++.+.+.
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq------HP~IvrL~~ti~ 80 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIVRLHDSIQ 80 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC------CCcEeehhhhhc
Confidence 45678899999999999999999999999999999998643 234577889999998886 789999999999
Q ss_pred eCCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC-CeEEE
Q 005590 454 HLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKI 531 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~-~~vkL 531 (689)
.....|+|+|++.|+ |..-+-.. ..+++..+...++||++||.|+|.+||||||+||+|+|+-+..+ .-+||
T Consensus 81 ~~~~~ylvFe~m~G~dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 81 EESFHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred ccceeEEEEecccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceee
Confidence 999999999999975 44333322 34889999999999999999999999999999999999975433 46999
Q ss_pred EecCCcccccCCc--cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 532 IDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 532 ~DFGls~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+|||++...++.. ..++|||.|||||++...+|+..+|||+.|||||-||.|.+||.+.+...++.+|++..-..|
T Consensus 155 ~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~-- 232 (355)
T KOG0033|consen 155 ADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP-- 232 (355)
T ss_pred cccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC--
Confidence 9999998877543 347899999999999999999999999999999999999999999988898888863322111
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|.+. ..+++.++||++||..||.+|+|+.|+|+|||+.+
T Consensus 233 -------------------------------~~~w~-------~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 233 -------------------------------SPEWD-------TVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -------------------------------CcccC-------cCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 12222 23567899999999999999999999999999975
No 33
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.9e-41 Score=375.36 Aligned_cols=282 Identities=30% Similarity=0.482 Sum_probs=220.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
...+|++.++||+|+||+||+|.+..+++.||||++..+.. ...+|+.+++.++ |+||++++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~------h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLN------HINIIFLKDYYYTECFK 134 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcC------CCCCcceeeeEeecccc
Confidence 45689999999999999999999999999999998876532 3346888888774 78999999987532
Q ss_pred -----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 456 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 456 -----~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
..+++||||+.+++.+++...... ...+++..++.++.||+.||.|||+.||+||||||+||||+. ..+.+|
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vk 211 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLK 211 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCcee
Confidence 257899999999988877643322 233889999999999999999999999999999999999984 345799
Q ss_pred EEecCCcccccC--CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 531 IIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 531 L~DFGls~~~~~--~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|+|||+++.... ......+|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+.+++..+|.++
T Consensus 212 L~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 212 LCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999999976532 23345789999999998764 689999999999999999999999999988899999999998877
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.+.+.........+. +.......+...+|. ..+.++++||.+||++||.+|||+.|+|+||||+.
T Consensus 292 ~~~~~~~~~~~~~~~------~~~~~~~~l~~~~p~---------~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 292 EDQLKEMNPNYADIK------FPDVKPKDLKKVFPK---------GTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHHHhchhhhccc------CCccCchhHHHHhcc---------CCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 666543221110000 000000111111221 23467899999999999999999999999999964
No 34
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-40 Score=354.26 Aligned_cols=280 Identities=27% Similarity=0.409 Sum_probs=225.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.++||+|+||+||+|++..+++.||+|+++... .......+|+.+++.++ |+||+++++++...++.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 79 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIVHTDKSL 79 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC------CCCcceEEEEEeeCCeE
Confidence 67999999999999999999999999999999987542 22235667888887774 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.+++.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 80 ~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~ 152 (309)
T cd07872 80 TLVFEYLDKDLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (309)
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccce
Confidence 9999999998887765432 22788899999999999999999999999999999999984 7889999999987
Q ss_pred cccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.++.+.|...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 153 AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 54322 223467899999999875 45889999999999999999999999999999999999999998888877654
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.....+...... ..............+.++++||.+||+.||.+|||+.|+|+||||+.
T Consensus 233 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 233 SSNDEFKNYNFP--------------KYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred cchhhhhhhhcC--------------ccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 433222111000 00000111122335677899999999999999999999999999986
No 35
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-40 Score=361.73 Aligned_cols=289 Identities=30% Similarity=0.515 Sum_probs=223.0
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++.+.||+|+||.||++.+..+++.||+|++... ........+|+.+++.++ |+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~ 88 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIISLLNVFTPQ 88 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC------CCchhceeeeeecc
Confidence 468999999999999999999999999999999998753 223456667888887774 78999999998644
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
...++||||+.+++...+.. .++...++.++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 89 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~~ 158 (355)
T cd07874 89 KSLEEFQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 158 (355)
T ss_pred ccccccceeEEEhhhhcccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCCE
Confidence 35799999999988776542 1788899999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 530 KIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 530 kL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+.
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred EEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999999765443 2345789999999999999999999999999999999999999999888888888888888776
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccc--hhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.+.+.........+......... ..+...++... .........+..+++||.+||+.||++|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~ 314 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAG----LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCcccc----ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence 66655544332211111100000 00000001000 0001111234678999999999999999999999999999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
+.
T Consensus 315 ~~ 316 (355)
T cd07874 315 NV 316 (355)
T ss_pred hc
Confidence 74
No 36
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.5e-41 Score=353.90 Aligned_cols=249 Identities=26% Similarity=0.389 Sum_probs=209.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS------HPFIIRLFWTEHDQR 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC------CCcHhhhHhhhccCC
Confidence 47999999999999999999999999999999987532 22345667888887774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg 146 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFG 146 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecC
Confidence 99999999985 6777765432 2888999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 536 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 536 ls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
++...........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~------------ 214 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK------------ 214 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 99876665556689999999999999999999999999999999999999998877666555543110
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
..+|. ..+..+++||++||+.||.+|++ ++++++||||+.
T Consensus 215 -----------------------~~~~~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 215 -----------------------LEFPR---------HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred -----------------------cCCCc---------cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 01111 12456889999999999999995 999999999975
No 37
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-41 Score=367.52 Aligned_cols=279 Identities=23% Similarity=0.323 Sum_probs=216.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
..+|++++.||+|+||.||+|++..+++.||+|.... ....+|+++++.++ ||||++++++|......+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAIN------HPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCC------CCCCCCEeEEEEECCeeE
Confidence 4689999999999999999999999999999997643 34678999998885 789999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+|||++.++|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++..
T Consensus 160 lv~e~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~ 231 (391)
T PHA03212 160 LILPRYKTDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAACF 231 (391)
T ss_pred EEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCcccc
Confidence 999999988887765432 2788999999999999999999999999999999999984 78899999999865
Q ss_pred ccC----CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------hHHHHHHHHHhhcCCCcH
Q 005590 540 QTD----NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-------AVVMILARIIGMLGPIDL 608 (689)
Q Consensus 540 ~~~----~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~-------~~~~~l~~i~~~~g~~~~ 608 (689)
... ......||+.|+|||++.+..++.++|||||||++|+|++|..||-.. .....+..++...|+.|.
T Consensus 232 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 232 PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred cccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 332 223357999999999999999999999999999999999999877432 344567777777787665
Q ss_pred HHHhhhhh-hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 609 EMLMQGQE-IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 609 e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+....... ....+... . ......|.....+......+.++.+||.+||++||.+||||.|+|+||||+.
T Consensus 312 ~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 312 EFPIDAQANLDEIYIGL---------A-KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred hcCcchhHHHHHHHHHH---------H-hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 54322111 11111000 0 0000011111111112223457889999999999999999999999999986
No 38
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-40 Score=360.52 Aligned_cols=290 Identities=31% Similarity=0.513 Sum_probs=223.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++.+.||+|+||.||++.+..+++.||||++... ........+|+.+++.++ |+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC------CCCccccceeeccc
Confidence 458999999999999999999999999999999998753 223345667777777664 78999999988643
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
...++||||+.+++.+.+.. .++...+..++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~ 165 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcE
Confidence 35799999999988776642 1778889999999999999999999999999999999985 7889
Q ss_pred EEEecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 530 KIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 530 kL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+.
T Consensus 166 kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred EEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99999999765443 2335789999999999999999999999999999999999999999998899999988888877
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccc-cccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETN-QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
.+.+........................ ......+.. .......+..+++||.+||+.||.+|||+.|+|+||||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD---SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccc---ccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 6665554433222111111000000000 000001110 011112345789999999999999999999999999997
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
.
T Consensus 323 ~ 323 (364)
T cd07875 323 V 323 (364)
T ss_pred c
Confidence 4
No 39
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2e-40 Score=347.26 Aligned_cols=278 Identities=27% Similarity=0.418 Sum_probs=218.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---- 454 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~---- 454 (689)
+|++.+.||+|+||+||+|++..+++.||+|+++... .......+|+.+++.+.. .+|+||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---FDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---cCCCCeeeeeeeeccccCC
Confidence 5899999999999999999999999999999987532 122345678888887754 358999999999864
Q ss_pred -CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 -LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 -~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
....++||||+.+++.+++..... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~d 151 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLAD 151 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECc
Confidence 346899999999988887754322 22889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 534 LGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 534 FGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|.+||.+......+.++...++.+....|
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 9998765432 23356789999999999989999999999999999999999999988888888888877776555444
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......... ...... ...........+..+.+||.+||+.||++|||+.|+++||||
T Consensus 232 ~~~~~~~~~---------------~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 232 PRDVTLPRG---------------AFSPRG--PRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccccc---------------ccCCCC--CCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 321111000 000000 001111122345678899999999999999999999999998
No 40
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=361.94 Aligned_cols=261 Identities=33% Similarity=0.500 Sum_probs=224.1
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 375 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 375 ~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
....+...|.+.+.||+|.||.||+++++.+|+.+|+|++.+... ......+|+.+|+.+.. ||||+++++
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-----hpniv~l~~ 103 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-----HPNIVQLKD 103 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-----CCCEEEEEE
Confidence 344566789999999999999999999999999999999987543 34678899999999974 789999999
Q ss_pred EEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC--C
Q 005590 451 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR--C 527 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~--~ 527 (689)
+|.+...+++|||++.| .|++.+... .+++..+..++.||+.|+.|||+.||+||||||+|+|+..... +
T Consensus 104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~ 176 (382)
T KOG0032|consen 104 AFEDPDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSG 176 (382)
T ss_pred EEEcCCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCC
Confidence 99999999999999995 677777654 1999999999999999999999999999999999999976443 5
Q ss_pred eEEEEecCCcccccC--CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 528 EIKIIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 528 ~vkL~DFGls~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
.+|++|||++..... .....+||+.|+|||++.+.+|+..+||||+|+++|.|++|.+||.+.+.......|...-..
T Consensus 177 ~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~ 256 (382)
T KOG0032|consen 177 RIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFD 256 (382)
T ss_pred cEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCC
Confidence 899999999988766 456689999999999999999999999999999999999999999998887777766532221
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
++. +.+ ...+..+++||++||..||.+|+|+.++|+|||+
T Consensus 257 f~~---------------------------------~~w-------~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi 296 (382)
T KOG0032|consen 257 FTS---------------------------------EPW-------DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWI 296 (382)
T ss_pred CCC---------------------------------CCc-------cccCHHHHHHHHHhcccCcccCCCHHHHhcCccc
Confidence 111 111 1234568899999999999999999999999999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
+.
T Consensus 297 ~~ 298 (382)
T KOG0032|consen 297 KS 298 (382)
T ss_pred cC
Confidence 86
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.7e-41 Score=358.65 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=210.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS------HPFIVNMMCSFQDE 90 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCCCcEEEEEEcC
Confidence 368999999999999999999999999999999997542 23345677888888774 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+..++||||+.+ +|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Df 162 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDF 162 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeec
Confidence 999999999985 6776665322 2788999999999999999999999999999999999984 788999999
Q ss_pred CCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 535 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 535 Gls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
|++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 163 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------------ 230 (329)
T PTZ00263 163 GFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------------ 230 (329)
T ss_pred cCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------------
Confidence 99987766666678999999999999999999999999999999999999999887665555444311
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
...+|. ..+..+++||.+||+.||.+|++ ++++++||||++
T Consensus 231 -----------------------~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 231 -----------------------RLKFPN---------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred -----------------------CcCCCC---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 011111 13456889999999999999997 799999999975
No 42
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=350.28 Aligned_cols=265 Identities=28% Similarity=0.416 Sum_probs=215.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.-.+.|++.+.||.|..++||+|+...+++.||||++..++ ...+.+.+|+..+..+ +||||++++..|...
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~------~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI------DHPNIVTYHCSFVVD 96 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc------CCCCcceEEEEEEec
Confidence 44578999999999999999999999999999999998754 2346677777777766 478999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
..+++||+||. |+++++++.....+ +.+..+..|++++++||.|||.+|.||||||+.||||+. +|.|||+||
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~--dG~VkLadF 170 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS--DGTVKLADF 170 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC--CCcEEEcCc
Confidence 99999999999 67888888765544 999999999999999999999999999999999999995 899999999
Q ss_pred CCcccccC-------CccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 535 GSSCFQTD-------NLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 535 Gls~~~~~-------~~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
|.+....+ ...+++||++|||||++.. .+|+.|+||||||++..||.+|..||....+.+++..-.. +.
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~ 248 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--ND 248 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CC
Confidence 97644321 1255789999999999754 4699999999999999999999999988777766544332 22
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
+|... ..+... ...+..+..|+.+|..||+.||++||||+++|+|+||
T Consensus 249 pp~~~-t~~~~~-------------------------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 249 PPTLL-TSGLDK-------------------------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred CCCcc-cccCCh-------------------------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 22111 111000 0112223468999999999999999999999999999
Q ss_pred CCC
Q 005590 686 QHP 688 (689)
Q Consensus 686 ~~~ 688 (689)
++.
T Consensus 297 k~~ 299 (516)
T KOG0582|consen 297 KKA 299 (516)
T ss_pred hhc
Confidence 863
No 43
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.5e-42 Score=367.21 Aligned_cols=250 Identities=28% Similarity=0.485 Sum_probs=218.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|.+.+.||+|.||.||+|+.+.+.+.||+|.+.+.. .....+.+|++|++.++ ||||+.+++.|+...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk------Hpniv~m~esfEt~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK------HPNIVEMLESFETSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC------CcchhhHHHhhcccce
Confidence 57888999999999999999999999999999987642 33456788999999886 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+++|.||+.|+|..++..... ++++.++.|++|++.||.|||+.+|+|||+||.|||+. ..+.+|++|||+|
T Consensus 76 ~~vVte~a~g~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~--~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 76 LWVVTEYAVGDLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE--KGGTLKLCDFGLA 147 (808)
T ss_pred EEEEehhhhhhHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec--CCCceeechhhhh
Confidence 999999999999988876554 99999999999999999999999999999999999999 4889999999999
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
+-.+.. .+...|||.|||||++.+++|+..+|+||||||+||+++|++||-..+..++...|..--.++|.
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~------ 221 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS------ 221 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc------
Confidence 876654 34468999999999999999999999999999999999999999988888777776522111110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..+..|++||..+|..||.+|+|=.+++.|||.++.
T Consensus 222 --------------------------------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 222 --------------------------------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred --------------------------------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 234679999999999999999999999999998653
No 44
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=367.46 Aligned_cols=251 Identities=27% Similarity=0.455 Sum_probs=211.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.+|...++||+|+.|.||.|....+++.||||.+..... ..+-+.+|+.+|+.++ |+|||++++.|...+.++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~------H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH------HPNIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc------chHHHHHHHHhcccceeE
Confidence 568888999999999999999999999999999876543 3356778999999886 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+|||||+| +|.+.+.... +++.++..|+++++.||+|||.+||+|||||.+|||++. +|.+||+|||++.
T Consensus 347 VVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFca 417 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCA 417 (550)
T ss_pred EEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeee
Confidence 99999996 5666665433 889999999999999999999999999999999999995 7789999999987
Q ss_pred cccC---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
.... ...+.+|||.|||||++....|+.++||||||++++||+-|++||-+.++..-+..|. .-|.+.
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa-~ng~P~-------- 488 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPK-------- 488 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh-hcCCCC--------
Confidence 6543 3566899999999999999999999999999999999999999998765554444432 111111
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.. .....+++|++||.+||+.||.+|++|.|||+||||+.
T Consensus 489 -----------------------lk---------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 489 -----------------------LK---------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----------------------cC---------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 11 11234578999999999999999999999999999964
No 45
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.7e-40 Score=361.01 Aligned_cols=279 Identities=28% Similarity=0.468 Sum_probs=221.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC--
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 456 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~-- 456 (689)
+|++.+.||+|+||+||++.+..+|+.||||++... ........+|+++++.++ |+||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK------HDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC------CCCcCCHhheecCCCcc
Confidence 478899999999999999999999999999998642 223356677888887764 679999999998776
Q ss_pred ---eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 457 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 457 ---~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
+.++||||+.++|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~D 146 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICD 146 (372)
T ss_pred ccceEEEEeeccccCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEecc
Confidence 899999999988877765322 3889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCC----ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 534 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 534 FGls~~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
||++...... .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+...+|.++.
T Consensus 147 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 147 FGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred ccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 9998764322 2234678899999999874 4789999999999999999999999999999999999999998777
Q ss_pred HHHhhhhh-hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 609 EMLMQGQE-IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 609 e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+.+..... ...++... ....|............++++.+||.+||+.||++|||+.|+|+||||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 227 EAMRSACEGARAHILRG-------------PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHhhHHHHHHHHhC-------------CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 66544322 11111100 00011111111111233577899999999999999999999999999986
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=352.91 Aligned_cols=255 Identities=27% Similarity=0.405 Sum_probs=210.6
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---------------hhhHhHHHHHHHHHHhcccCCCCC
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------------DFFDQSLDEIKLLKLVNKNDPADE 442 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---------------~~~~~~~~Ei~iL~~l~~~~~~~h 442 (689)
..-++|++++.||+|.||+|.+|++..+++.||||++.+.+ ...++..+|+.||++++ |
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~------H 167 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH------H 167 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC------C
Confidence 34578999999999999999999999999999999997532 12357788999999886 6
Q ss_pred CceeEEEEEEEeC--CeEEEEEEccccchHHHHhhhhccCCCcc-cCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 005590 443 HHILRLYDYFYHL--EHLFIVCELLRANLYEFQKFNQESGGEAY-FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 519 (689)
Q Consensus 443 ~~Iv~l~~~f~~~--~~l~lVmEy~~g~L~~l~~~~~~~~~~~~-ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NI 519 (689)
+|||+|+.+..+. +.+|||+|||..+-... ...... +++.+++.+++.++.||.|||.+|||||||||+|+
T Consensus 168 ~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w------~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 168 PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW------CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCeeEEEEeecCcccCceEEEEEeccCCcccc------CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 7999999998865 58999999998543222 222233 89999999999999999999999999999999999
Q ss_pred EEeccCCCeEEEEecCCccccc--------CCccccccCccccChhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCC
Q 005590 520 LIKSYQRCEIKIIDLGSSCFQT--------DNLCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLF 587 (689)
Q Consensus 520 Ll~~~~~~~vkL~DFGls~~~~--------~~~~~~~gt~~Y~APE~l~~~~----~s~~~DIwSLGvil~eLltG~~PF 587 (689)
||+. +|+|||+|||.+.... +.....+|||.|+|||.+.+.. .+.+.|||||||+||.|+.|+.||
T Consensus 242 Ll~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 242 LLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred EEcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 9995 7999999999887541 1234478999999999998732 457899999999999999999999
Q ss_pred CCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcc
Q 005590 588 PNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLE 667 (689)
Q Consensus 588 ~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~ 667 (689)
-++...++..+|+...- .+|... ...+.++|||.+||+
T Consensus 320 ~~~~~~~l~~KIvn~pL-----------------------------------~fP~~p-------e~~e~~kDli~~lL~ 357 (576)
T KOG0585|consen 320 FDDFELELFDKIVNDPL-----------------------------------EFPENP-------EINEDLKDLIKRLLE 357 (576)
T ss_pred ccchHHHHHHHHhcCcc-----------------------------------cCCCcc-------cccHHHHHHHHHHhh
Confidence 99999998888863211 222221 123568899999999
Q ss_pred cCCCCCcCHHHHHcCCCCCCC
Q 005590 668 INPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 668 ~dP~kRpTa~ElL~hpwf~~~ 688 (689)
+||++|+++.++-.|||..+.
T Consensus 358 KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 358 KDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cChhheeehhhheecceeccC
Confidence 999999999999999998764
No 47
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.4e-40 Score=354.94 Aligned_cols=279 Identities=32% Similarity=0.578 Sum_probs=222.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++++.||+|+||+||+|.+..+++.||+|++.... .......+|+++++.++ |+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK------HENVIGLLDVFTPA 86 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC------CCchhhhhhhhccc
Confidence 3578999999999999999999999999999999987532 22345667888888774 67999999988643
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
...+++|++++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~ 157 (343)
T cd07878 87 TSIENFNEVYLVTNLMGADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCEL 157 (343)
T ss_pred ccccccCcEEEEeecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCE
Confidence 457999999988887766421 2889999999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 530 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
||+|||++...........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+....+.++.
T Consensus 158 kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 158 RILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred EEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999999877666666789999999999987 46889999999999999999999999998888888888888777766
Q ss_pred HHHhhhhhh--hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
+.+...... ..+.. .+ ...+. ..+.......++.+.+||.+||+.||.+|||+.|+|+||||.
T Consensus 238 ~~~~~~~~~~~~~~~~-------------~~-~~~~~-~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~ 302 (343)
T cd07878 238 EVLKKISSEHARKYIQ-------------SL-PHMPQ-QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS 302 (343)
T ss_pred HHHHhcchhhHHHHhh-------------cc-ccccc-hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 554432211 01100 00 00111 111222233456788999999999999999999999999997
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
.
T Consensus 303 ~ 303 (343)
T cd07878 303 Q 303 (343)
T ss_pred c
Confidence 5
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=354.21 Aligned_cols=254 Identities=25% Similarity=0.424 Sum_probs=210.4
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCC-cEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 376 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 376 ~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg-~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
..+..++|++.+.||+|+||.||+|++..++ ..||+|++.... .....+.+|+.+++.++ ||||+++++
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~ 98 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN------HPFCVNLYG 98 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCCcceEE
Confidence 4445578999999999999999999876554 689999987532 23345667888887774 789999999
Q ss_pred EEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 451 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
++...+..++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 99 ~~~~~~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~i 170 (340)
T PTZ00426 99 SFKDESYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFI 170 (340)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCE
Confidence 99999999999999974 6777765432 2889999999999999999999999999999999999984 7899
Q ss_pred EEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 530 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
||+|||++...........||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+.......+....
T Consensus 171 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------ 244 (340)
T PTZ00426 171 KMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------ 244 (340)
T ss_pred EEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------
Confidence 99999999876655556789999999999999889999999999999999999999998877666555543111
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPW 684 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpw 684 (689)
..+|. ..+..+.+||++||+.||.+|+ |++++++|||
T Consensus 245 -----------------------------~~~p~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 245 -----------------------------IYFPK---------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred -----------------------------CCCCC---------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 01111 1235678999999999999995 8999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|++
T Consensus 287 f~~ 289 (340)
T PTZ00426 287 FGN 289 (340)
T ss_pred cCC
Confidence 985
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.6e-40 Score=352.28 Aligned_cols=257 Identities=25% Similarity=0.346 Sum_probs=210.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||.||+|++..+++.||||+++... .....+.+|+.++..++ |+||+++++++...+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK------SEWLVKLLYAFQDDE 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC------CCCCccEEEEEEcCC
Confidence 47999999999999999999999999999999997642 22345666777777664 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg 146 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFG 146 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCc
Confidence 99999999975 6777765322 2889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 536 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 536 ls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
++...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+......
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---------- 216 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET---------- 216 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc----------
Confidence 9987665555678999999999999999999999999999999999999999887776665554311000
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...|... ......+.++.+||.+||..+|.+||++.++++||||..
T Consensus 217 -----------------------~~~~~~~---~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 217 -----------------------LQRPVYD---DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred -----------------------ccCCCCC---ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 0000000 000123467889999999999999999999999999986
No 50
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-42 Score=340.76 Aligned_cols=244 Identities=27% Similarity=0.401 Sum_probs=204.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE-EEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD-YFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~---~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~-~f~~~~ 456 (689)
..|+|+++||+|.||+||++++..+|..+|.|.+.- +.........|+.+|+.|+ ||||+++++ .|...+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~------HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN------HPNIVQYYAHSFIEDN 92 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC------CchHHHHHHHhhhccc
Confidence 579999999999999999999999999999998874 3344567788999999886 679999998 555555
Q ss_pred e-EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH--CC--ceeccCCCCcEEEeccCCCeEE
Q 005590 457 H-LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS--LG--IIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 457 ~-l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~--~g--IvHrDLKp~NILl~~~~~~~vk 530 (689)
. ++||||||+ |+|...++..+. ....+++..++.++.|++.||..+|+ .+ |+||||||.||+|+ .+|.||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~--~~gvvK 168 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT--ANGVVK 168 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc--CCCcee
Confidence 4 999999999 577777765543 34559999999999999999999999 45 99999999999999 589999
Q ss_pred EEecCCcccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 531 IIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 531 L~DFGls~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|+|||++++..... ..++|||.||+||.+.+.+|+.++|||||||++|||+.-++||.+.+-.++..+|...--|
T Consensus 169 LGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~-- 246 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP-- 246 (375)
T ss_pred eccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC--
Confidence 99999999876543 3479999999999999999999999999999999999999999999888887777522100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 676 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa 676 (689)
.+|. . ..+..+..||..|+..||+.||+.
T Consensus 247 --------------------------------~~p~-----~---~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 247 --------------------------------PLPD-----E---HYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred --------------------------------CCcH-----H---HhhhHHHHHHHHHccCCcccCCCc
Confidence 0110 1 123457799999999999999985
No 51
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-39 Score=346.43 Aligned_cols=286 Identities=26% Similarity=0.395 Sum_probs=210.8
Q ss_pred EEeccCCCCceEEEEEC--CCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--CCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~--~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~--~~~l~lVm 462 (689)
++||+|+||+||+|+++ .+++.+|+|++..... .....+|+.+++.++ ||||+++++++.. ..+.++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELK------HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcC------CCCCcceeeeEecCCCcEEEEEE
Confidence 57999999999999965 4678999999875432 345678999998874 7899999999864 45789999
Q ss_pred EccccchHHHHhhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--cCCCeEEEEecCCc
Q 005590 463 ELLRANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKIIDLGSS 537 (689)
Q Consensus 463 Ey~~g~L~~l~~~~~~~---~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~--~~~~~vkL~DFGls 537 (689)
||+.+++.+++...... .....+++..++.++.||+.||.|||+.||+||||||+|||+.. ...+.+||+|||++
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99999988887644321 12234889999999999999999999999999999999999953 24678999999999
Q ss_pred ccccCC------ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHHHHHHHh
Q 005590 538 CFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARIIG 601 (689)
Q Consensus 538 ~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~---------~~~l~~i~~ 601 (689)
...... .....+|+.|+|||++.+. .++.++||||+||++|+|++|++||..... ...+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 765432 2235779999999999874 589999999999999999999999965332 356677888
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.+|.++...|................. .......+............+..+.+||++||++||.+|||++|+|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFR------RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhh------ccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 888777666654332211100000000 00000000000111112233567889999999999999999999999
Q ss_pred CCCC
Q 005590 682 HPWL 685 (689)
Q Consensus 682 hpwf 685 (689)
||||
T Consensus 314 hp~f 317 (317)
T cd07868 314 DPYF 317 (317)
T ss_pred CCCC
Confidence 9998
No 52
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.5e-40 Score=351.75 Aligned_cols=243 Identities=26% Similarity=0.397 Sum_probs=199.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+|+.||||+++... .......+|+.+++.+ .||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT------RHPFLTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCCEEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 2234556677777666 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccc
Confidence 99985 5666554322 3889999999999999999999999999999999999984 7889999999986532
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~---------------- 210 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------------- 210 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC----------------
Confidence 2233467999999999999999999999999999999999999999877665555443210
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
...+|. ..+..+.+||++||+.||++|| ++.++++||||+.
T Consensus 211 -------------------~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 211 -------------------EIRFPR---------TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred -------------------CCCCCC---------CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 001111 2346688999999999999999 8999999999976
No 53
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-39 Score=341.00 Aligned_cols=278 Identities=27% Similarity=0.431 Sum_probs=221.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||.|+||.||+|.+..+++.||+|.++... .......+|+.+++.++ |+||+++++++...+..
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~nI~~~~~~~~~~~~~ 79 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIIHTEKSL 79 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC------CCCcceEEEEEecCCeE
Confidence 67999999999999999999999999999999987532 22345667888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++|.+++..... .+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 80 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~ 152 (301)
T cd07873 80 TLVFEYLDKDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (301)
T ss_pred EEEEeccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchh
Confidence 99999999988877654321 2788999999999999999999999999999999999984 7789999999986
Q ss_pred cccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+.+..+...++.+....|...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 54322 2234568899999998764 4788999999999999999999999998888888888888887776665442
Q ss_pred hhhhhhhhccccchhhhhccccccccCCc--cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.....+.. ...|. ...+.......+..+++||.+||+.||.+|||+.|+|+||||+.
T Consensus 233 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 233 LSNEEFKS----------------YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred hccccccc----------------cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 21111000 00111 00011122234567899999999999999999999999999975
No 54
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=348.46 Aligned_cols=253 Identities=29% Similarity=0.425 Sum_probs=203.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC--e
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--H 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~--~ 457 (689)
.+|...+.||+|+||.||++.+..+|+..|||.+.... ...+.+.+|+++|..++ ||+||++++...... .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~ 90 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDE 90 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCee
Confidence 56888899999999999999999999999999987642 12456889999999986 679999999865554 6
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++|.|||+. |+|.+++...+. .+++..++.+++||++||.|||++||+||||||+|||++.. ++.+||+|||+
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~ 164 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGL 164 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcc
Confidence 999999998 578888775543 29999999999999999999999999999999999999941 58999999998
Q ss_pred cccccC------CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcH
Q 005590 537 SCFQTD------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDL 608 (689)
Q Consensus 537 s~~~~~------~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~ 608 (689)
+..... ......||+.|||||++.+. ....++|||||||++.||+||++||... ...+.+..+.
T Consensus 165 a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig-------- 236 (313)
T KOG0198|consen 165 AKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG-------- 236 (313)
T ss_pred ccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh--------
Confidence 876552 13347899999999999963 3345999999999999999999999763 2222221111
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.......+|. ..+.++++||++||..||++||||+++|+|||+++
T Consensus 237 -------------------------~~~~~P~ip~---------~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 237 -------------------------REDSLPEIPD---------SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred -------------------------ccCCCCCCCc---------ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 0000112222 24567899999999999999999999999999975
No 55
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=350.13 Aligned_cols=256 Identities=29% Similarity=0.490 Sum_probs=225.7
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 376 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 376 ~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
+..|++-|.+.+.||+|.|+.|-+|++..+|+.||||++.+.+ .....+..|++.|+.++ |||||++|.+.
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ------HpNiVRLYEVi 86 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ------HPNIVRLYEVI 86 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc------CcCeeeeeehh
Confidence 4567788999999999999999999999999999999997653 34567788999998886 67999999999
Q ss_pred EeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 453 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 453 ~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
.....+|+|+|+=++ +|++++..+... +.+..+++++.||+.|+.|+|+..+|||||||+||.+.. .-|-|||
T Consensus 87 DTQTKlyLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE-KlGlVKL 160 (864)
T KOG4717|consen 87 DTQTKLYLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE-KLGLVKL 160 (864)
T ss_pred cccceEEEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee-ecCceEe
Confidence 999999999999874 899999866543 899999999999999999999999999999999998874 5789999
Q ss_pred EecCCcccc--cCCccccccCccccChhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 532 IDLGSSCFQ--TDNLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 532 ~DFGls~~~--~~~~~~~~gt~~Y~APE~l~~~~~s-~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
+|||++-.+ +....+.||+..|-|||+++|..|+ +++||||||||||.|.+|++||+..+..+.+..|+.+
T Consensus 161 TDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC------ 234 (864)
T KOG4717|consen 161 TDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC------ 234 (864)
T ss_pred eeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc------
Confidence 999998543 4567789999999999999999988 5799999999999999999999999999999988733
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|.+|.. .+.++++||..||+.||.+|.+++|+..|+|+|.
T Consensus 235 -----------------------------KYtvPsh---------vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 235 -----------------------------KYTVPSH---------VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -----------------------------cccCchh---------hhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 3445543 2367899999999999999999999999999985
No 56
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3e-39 Score=351.81 Aligned_cols=252 Identities=22% Similarity=0.352 Sum_probs=203.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||+||+|++..+++.||||++.... .....+.+|+.+++.+ +|++|+++++.+.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~------~~~~iv~~~~~~~~~~ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA------DSLWVVKMFYSFQDKL 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC------CCCCcceEEEEEecCC
Confidence 47999999999999999999999999999999997532 2234556677777766 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFG 146 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFG 146 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeecc
Confidence 99999999985 6777665322 3889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC--------------------------------------ccccccCccccChhhhcCCCCCchhhHHHHHHHH
Q 005590 536 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 577 (689)
Q Consensus 536 ls~~~~~~--------------------------------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil 577 (689)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98643211 1234789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHH
Q 005590 578 AELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAF 657 (689)
Q Consensus 578 ~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~ 657 (689)
|+|++|..||.+.+..+...++..... ...+|... ..++.
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~p~~~-------~~s~~ 266 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKE---------------------------------TLIFPPEV-------PISEK 266 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcC---------------------------------cccCCCcC-------CCCHH
Confidence 999999999998777776666542110 11122211 12456
Q ss_pred HHHHHHHhcccCCC---CCcCHHHHHcCCCCCC
Q 005590 658 FIDFVRTLLEINPQ---RRPTAREALDHPWLQH 687 (689)
Q Consensus 658 l~dLI~~mL~~dP~---kRpTa~ElL~hpwf~~ 687 (689)
+++||.+|+. +|. .||+++|+++||||++
T Consensus 267 ~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 267 AKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred HHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence 8899999875 444 4689999999999985
No 57
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.9e-39 Score=349.28 Aligned_cols=299 Identities=31% Similarity=0.529 Sum_probs=229.5
Q ss_pred CcceeeCc---eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005590 370 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 443 (689)
Q Consensus 370 ~~pi~~~~---~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~ 443 (689)
++|+..+. .+.++|++.+.||+|+||.||+|.+..+++.||+|++... ........+|+.+++.++ |+
T Consensus 2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ 75 (353)
T cd07850 2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN------HK 75 (353)
T ss_pred ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC------CC
Confidence 35566655 4578999999999999999999999999999999998642 223345667888877764 78
Q ss_pred ceeEEEEEEEeC------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 005590 444 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 517 (689)
Q Consensus 444 ~Iv~l~~~f~~~------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~ 517 (689)
||++++++|... .+.++||||+.+++.+.+... ++...+..++.||+.||.|||+.||+||||||+
T Consensus 76 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~ 147 (353)
T cd07850 76 NIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 147 (353)
T ss_pred CCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence 999999998644 357999999999888766421 778899999999999999999999999999999
Q ss_pred cEEEeccCCCeEEEEecCCcccccCCc--cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 595 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~ 595 (689)
||+++. ++.+||+|||++....... ....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+....
T Consensus 148 Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 225 (353)
T cd07850 148 NIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ 225 (353)
T ss_pred HEEECC--CCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999985 7789999999997654432 234678899999999999999999999999999999999999999888888
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccc---hhhhhccCCcHHHHHHHHHhcccCCCC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES---SLEHHLQFSDAFFIDFVRTLLEINPQR 672 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~l~~~~~~~~~~l~dLI~~mL~~dP~k 672 (689)
...+...++.++.++..........+......... ..+...++... .........+..+++||.+||+.||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 301 (353)
T cd07850 226 WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG----YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEK 301 (353)
T ss_pred HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC----cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhh
Confidence 88999899988877665544332222111110000 00011111100 000001123456889999999999999
Q ss_pred CcCHHHHHcCCCCCCC
Q 005590 673 RPTAREALDHPWLQHP 688 (689)
Q Consensus 673 RpTa~ElL~hpwf~~~ 688 (689)
|||+.|+|+||||+..
T Consensus 302 R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 302 RISVDDALQHPYINVW 317 (353)
T ss_pred CcCHHHHhcChhHhhc
Confidence 9999999999999753
No 58
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=331.45 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=212.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---------~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
..|.-.+.||.|..++|.++.++.+|..+|+|++... ....+...+|+.||+++. +||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeee
Confidence 4566777899999999999999999999999998642 123455667899999986 68999999999
Q ss_pred EEeCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 452 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 452 f~~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
|+....+++|+|.|. |.|.+++...- .+++++.+.|++|++.|+.|||.++|+||||||+|||++ ++..||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld--dn~~i~ 163 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD--DNMNIK 163 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec--cccceE
Confidence 999999999999998 78999886443 399999999999999999999999999999999999999 478899
Q ss_pred EEecCCcccccCC--ccccccCccccChhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhh
Q 005590 531 IIDLGSSCFQTDN--LCLYVQSRSYRAPEVII------GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 531 L~DFGls~~~~~~--~~~~~gt~~Y~APE~l~------~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~ 602 (689)
|+|||+++..... ....||||+|.|||.+. ..+|+..+|+|++|||||.|+.|.+||......-++..|+..
T Consensus 164 isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred EeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 9999999987654 55689999999999985 235999999999999999999999999876666666665522
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
+.+..-|++... +...+|||++||+.||++|+|++|+|+|
T Consensus 244 ---------------------------------kyqF~speWadi-------s~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 ---------------------------------KYQFRSPEWADI-------SATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ---------------------------------ccccCCcchhhc-------cccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 122223333332 3446899999999999999999999999
Q ss_pred CCCC
Q 005590 683 PWLQ 686 (689)
Q Consensus 683 pwf~ 686 (689)
|||+
T Consensus 284 pff~ 287 (411)
T KOG0599|consen 284 PFFI 287 (411)
T ss_pred hHHH
Confidence 9994
No 59
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-39 Score=345.92 Aligned_cols=249 Identities=26% Similarity=0.414 Sum_probs=204.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
|++++.||+|+||.||+|.+..+++.||||+++... .....+.+|++++..++ ...||||+++++++...++.
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~---~l~hp~i~~~~~~~~~~~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN---SERHPFLVNLFACFQTEDHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc---ccCCCChhceeeEEEcCCEE
Confidence 688999999999999999999999999999997542 23345666777666554 34699999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
|+||||+.+ +|...+.. ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~lv~E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~ 148 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLC 148 (324)
T ss_pred EEEEcCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCC
Confidence 999999986 45444321 13899999999999999999999999999999999999985 788999999987
Q ss_pred cccc---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
.... ......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~----------- 217 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE----------- 217 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 6432 22334678999999999999999999999999999999999999998877666655543110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
...|. ..+..+.+||++||+.||.+|| ++.++++||||++
T Consensus 218 ------------------------~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 218 ------------------------VRYPR---------FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred ------------------------CCCCC---------CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 01111 1245678999999999999999 7999999999975
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-39 Score=352.47 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=205.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||+||+|++..+++.||||++.... .....+.+|+.+++.++ |+||++++++|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD------NPWVVKLYYSFQDEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCC
Confidence 47999999999999999999999999999999997542 23345667888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg 146 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFG 146 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecc
Confidence 99999999975 6766665322 2899999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC-----------------------------------------ccccccCccccChhhhcCCCCCchhhHHHHH
Q 005590 536 SSCFQTDN-----------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLG 574 (689)
Q Consensus 536 ls~~~~~~-----------------------------------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLG 574 (689)
++...... ....+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 87543211 0124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCC
Q 005590 575 CILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS 654 (689)
Q Consensus 575 vil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~ 654 (689)
|++|+|++|..||.+.+..+....+..... ...+|... ..
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~~~~~-------~~ 266 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKE---------------------------------TLQFPDEV-------PL 266 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCC---------------------------------ccCCCCCC-------CC
Confidence 999999999999988776665554431100 01111111 23
Q ss_pred cHHHHHHHHHhcccCCCCCcC---HHHHHcCCCCCC
Q 005590 655 DAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 687 (689)
Q Consensus 655 ~~~l~dLI~~mL~~dP~kRpT---a~ElL~hpwf~~ 687 (689)
++.+++||++||. +|.+|++ +.|+++||||..
T Consensus 267 s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 267 SPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 4678899999997 9999998 999999999975
No 61
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.5e-39 Score=340.09 Aligned_cols=253 Identities=25% Similarity=0.287 Sum_probs=200.6
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
|++.+.||+|+||+||++.+..+|+.||+|++.... .......+|+.+++.++ |++|+++++++...+..
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~iv~~~~~~~~~~~~ 75 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN------SRFVVSLAYAYETKDAL 75 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC------CCcEEEEEEEEccCCeE
Confidence 788999999999999999999999999999987532 12234567888887774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|...+.... ...+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~~ 149 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGLA 149 (285)
T ss_pred EEEEEecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCCc
Confidence 999999985 5555543221 123889999999999999999999999999999999999984 778999999998
Q ss_pred ccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 538 CFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 538 ~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+...+.
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----------- 218 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK----------- 218 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-----------
Confidence 765332 2345789999999999999999999999999999999999999986543222221110000
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
.....++ ...+..+.+||++||+.||.+||+ ++++++||||+.
T Consensus 219 --------------------~~~~~~~---------~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 219 --------------------EDQEEYS---------EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred --------------------cccccCC---------ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 0000111 123466889999999999999997 999999999976
No 62
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.8e-39 Score=344.50 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=204.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+|++++.||+|+||.||+|++..+++.||||++..+. ........|.+++..+.+ |++|+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCC-----CCceeeeEEEEEcCCE
Confidence 5899999999999999999999999999999997642 233456677777776653 4579999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~ 147 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGM 147 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCc
Confidence 9999999985 6666654322 2788999999999999999999999999999999999985 78899999998
Q ss_pred ccccc---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------- 218 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------- 218 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---------
Confidence 86421 223345789999999999999999999999999999999999999988776666655532111
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf~~ 687 (689)
.+|. ..+..+++||++||..||.+|+++ +++++||||+.
T Consensus 219 --------------------------~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 219 --------------------------SYPK---------SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred --------------------------CCCC---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 1111 134568899999999999999986 89999999975
No 63
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.5e-39 Score=336.38 Aligned_cols=276 Identities=31% Similarity=0.435 Sum_probs=218.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||+|+||.||+|++..+|+.+|+|+++... .......+|+.+++.++ |+||+++++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC------CCCeeeHHHHhccCCce
Confidence 6899999999999999999999999999999987532 22345667888888774 67999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++|+||+.+++.+++.... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++.
T Consensus 75 ~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~ 147 (284)
T cd07839 75 TLVFEYCDQDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLAR 147 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhh
Confidence 9999999998887765332 23899999999999999999999999999999999999985 7789999999987
Q ss_pred cccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCC-CCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVL-FPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~P-F~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|..| |.+.+..+.+..+...++..+...+..
T Consensus 148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 148 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred ccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHH
Confidence 54332 2234568899999998775 478999999999999999998877 567777788888888888777666554
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+. .....+............+..+++||++||+.||.+|||+.++++||||
T Consensus 228 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 228 VSKLPDYK---------------PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhhccccc---------------ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 33221110 0001111111122223345778999999999999999999999999998
No 64
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-38 Score=331.67 Aligned_cols=278 Identities=27% Similarity=0.435 Sum_probs=219.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||+|++|.||+|++..+++.||+|++.... .......+|+.+++.+. |+||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ------HPNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC------CCCEeeeEEEEeeCCeE
Confidence 4899999999999999999999999999999986532 22356677888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.+++.+++..... ...+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~ 149 (285)
T cd07861 75 YLIFEFLSMDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLAR 149 (285)
T ss_pred EEEEecCCCCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECccccee
Confidence 99999999888877654321 234889999999999999999999999999999999999984 7889999999986
Q ss_pred cccCCc---cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~~---~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ....+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+......+..+...++......|...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 543321 223568899999998754 5789999999999999999999999988887777777777777666666544
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+.... ... ............+.++++||++||+.||++|||+.++++||||
T Consensus 230 ~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDYKNTF-------------PKW--KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHHHhhc-------------ccc--CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 4332221100 000 0001111122356778999999999999999999999999997
No 65
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-39 Score=341.42 Aligned_cols=254 Identities=27% Similarity=0.386 Sum_probs=211.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
-..|++++.||+|.-|+||+++...++..+|+|++.++.. ...+...|.+||..+ +||+++.+|..|+..
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l------DHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL------DHPFLPTLYASFETD 149 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc------CCCccchhhheeecc
Confidence 3678999999999999999999999999999999987532 234555677777766 689999999999999
Q ss_pred CeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
...|+|||||.|+ |..+.+ . +....|++..++.++..++.||+|||.+|||+|||||+||||. ++|+|.|+||
T Consensus 150 ~~~cl~meyCpGGdL~~Lrq-k---Qp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr--edGHIMLsDF 223 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQ-K---QPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR--EDGHIMLSDF 223 (459)
T ss_pred ceeEEEEecCCCccHHHHHh-h---CCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe--cCCcEEeeec
Confidence 9999999999964 554433 2 3345599999999999999999999999999999999999999 5999999999
Q ss_pred CCcccc-----------------------------------cCC------------------------ccccccCccccC
Q 005590 535 GSSCFQ-----------------------------------TDN------------------------LCLYVQSRSYRA 555 (689)
Q Consensus 535 Gls~~~-----------------------------------~~~------------------------~~~~~gt~~Y~A 555 (689)
.++... ... ...++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 975210 000 012577888999
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccc
Q 005590 556 PEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETN 635 (689)
Q Consensus 556 PE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (689)
||++.|...+.++|+|+|||++||||.|..||.+.+..+.+.+|+..-.
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l------------------------------- 352 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL------------------------------- 352 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC-------------------------------
Confidence 9999999999999999999999999999999999999999988863222
Q ss_pred cccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC----HHHHHcCCCCCC
Q 005590 636 QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT----AREALDHPWLQH 687 (689)
Q Consensus 636 ~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT----a~ElL~hpwf~~ 687 (689)
.+|... .....++|||+++|.+||++|+. |.|+=+||||++
T Consensus 353 ----~Fp~~~-------~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 353 ----KFPEEP-------EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred ----cCCCCC-------cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence 223222 12345889999999999999999 999999999986
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.3e-39 Score=344.25 Aligned_cols=291 Identities=24% Similarity=0.278 Sum_probs=210.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
..++|++++.||+|+||.||++++..++..+|+|++... ......+.+|+++++.++ |+||+++++++...+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 76 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDG 76 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCCCCeEEEEEEECC
Confidence 357899999999999999999999999999999998764 233456778888888774 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEec
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
..++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.++|+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Df 148 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDF 148 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccC
Confidence 99999999985 6777665332 288999999999999999999986 6999999999999984 788999999
Q ss_pred CCcccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 535 GSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 535 Gls~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
|++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||......++...+..............
T Consensus 149 g~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 228 (331)
T ss_pred cccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence 998755332 3345789999999999999999999999999999999999999987766554332211100000000000
Q ss_pred hhhh----hhhhhcc----ccchhhhhcc-ccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 614 GQEI----YKYFTKE----YDLYYINEET-NQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 614 ~~~~----~~~~~~~----~~~~~~~~~~-~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.... ....... .......... .......|... ....+.++++||.+||++||++|||+.|+|+|||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-----NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC-----CccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0000 0000000 0000000000 00000011100 1124567999999999999999999999999999
Q ss_pred CCCC
Q 005590 685 LQHP 688 (689)
Q Consensus 685 f~~~ 688 (689)
|+..
T Consensus 304 ~~~~ 307 (331)
T cd06649 304 IKRS 307 (331)
T ss_pred Hhhc
Confidence 9753
No 67
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.3e-39 Score=349.57 Aligned_cols=252 Identities=29% Similarity=0.441 Sum_probs=207.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||+||+|++..+++.||||+++... .....+.+|+.++..++ |+||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD------SPWIVKLYYSFQDEE 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC------CCCccchhhheecCC
Confidence 47999999999999999999999999999999997542 23345667777777765 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.+ +|.+++... ..+++..++.++.||+.||.|||+.||+||||||+||||+. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg 146 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRK------DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFG 146 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCC
Confidence 99999999974 777776543 22889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCc--------------------------------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005590 536 SSCFQTDNL--------------------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 583 (689)
Q Consensus 536 ls~~~~~~~--------------------------------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG 583 (689)
++....... ....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 987644322 235789999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHH
Q 005590 584 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 663 (689)
Q Consensus 584 ~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~ 663 (689)
+.||..........++..... ...+|... ..++.+.+||.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~p~~~-------~~~~~~~~li~ 266 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKE---------------------------------SLRFPPDP-------PVSPEAIDLIC 266 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCC---------------------------------cccCCCCC-------CCCHHHHHHHH
Confidence 999988776665555432100 01111111 13467889999
Q ss_pred HhcccCCCCCcC-HHHHHcCCCCCC
Q 005590 664 TLLEINPQRRPT-AREALDHPWLQH 687 (689)
Q Consensus 664 ~mL~~dP~kRpT-a~ElL~hpwf~~ 687 (689)
+||. ||.+|++ +.++|+||||+.
T Consensus 267 ~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 267 RLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 9997 9999999 999999999975
No 68
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.3e-39 Score=352.22 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=201.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.|++++.||+|+||+||+|++..+++.||||++.... .....+.+|+.+++.++ |+||+++++++.+.++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~l~~~~~~~~~ 75 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD------NEWVVKLYYSFQDKDN 75 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC------CCCeeeeEEEEecCCE
Confidence 6899999999999999999999999999999997532 23445677888887764 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+||||+. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl 147 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGL 147 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcC
Confidence 9999999975 6777665322 2888999999999999999999999999999999999984 78899999998
Q ss_pred cccccC--------------------------------------------------CccccccCccccChhhhcCCCCCc
Q 005590 537 SCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQ 566 (689)
Q Consensus 537 s~~~~~--------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ 566 (689)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 643210 011347899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccch
Q 005590 567 KIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS 646 (689)
Q Consensus 567 ~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 646 (689)
++|||||||++|+|++|..||...+..+....+..... ...+|..
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~~~~-- 272 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------------------------TLHIPPQ-- 272 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------------------------ccCCCCC--
Confidence 99999999999999999999987766554444431100 0111111
Q ss_pred hhhhccCCcHHHHHHHHHhccc--CCCCCcCHHHHHcCCCCCC
Q 005590 647 LEHHLQFSDAFFIDFVRTLLEI--NPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 647 l~~~~~~~~~~l~dLI~~mL~~--dP~kRpTa~ElL~hpwf~~ 687 (689)
...++++++||.+||.. +|..|+++.++++||||+.
T Consensus 273 -----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 273 -----VKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred -----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 11346788999996654 4555999999999999975
No 69
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-40 Score=321.56 Aligned_cols=256 Identities=27% Similarity=0.417 Sum_probs=215.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
-++|.|.+.||+|-||.||+|+.+.++-.||+|++.+.. ......+-++.+.+.....+.||||+++|++|.+....|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 478999999999999999999999999999999998653 222223333444444445567899999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+++||.. |.++..+..... ..+.+.....+++|++.||.|+|..++|||||||+|+|++. .+.+||+|||.+.
T Consensus 99 LilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfGwsV 172 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFGWSV 172 (281)
T ss_pred EEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeeccCCCcee
Confidence 9999998 567776653322 33889999999999999999999999999999999999996 8889999999987
Q ss_pred ccc-CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 539 FQT-DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 539 ~~~-~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
... ....+.|||..|.|||++.+..++..+|+|++|++.||++.|.+||...+..+.+.+|.++
T Consensus 173 ~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~--------------- 237 (281)
T KOG0580|consen 173 HAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV--------------- 237 (281)
T ss_pred ecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc---------------
Confidence 653 4456789999999999999999999999999999999999999999988888888888633
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+..+|. ..+..+.|||.+||..+|.+|.+..|++.|||+..
T Consensus 238 --------------------~~~~p~---------~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 238 --------------------DLKFPS---------TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred --------------------cccCCc---------ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 233331 23456789999999999999999999999999864
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.6e-39 Score=342.13 Aligned_cols=241 Identities=29% Similarity=0.457 Sum_probs=198.1
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||+|+||+||+|++..+++.||+|++... ........+|+.+++.+ +||||+++++++...+..++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV------NCPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCcEeceeeEEecCCeEEEEEcC
Confidence 79999999999999999999999998753 22334566777777766 478999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC-
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 542 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~- 542 (689)
+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++.....
T Consensus 75 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 75 INGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccC
Confidence 985 6666665322 2889999999999999999999999999999999999984 78899999999875322
Q ss_pred --CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 005590 543 --NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 620 (689)
Q Consensus 543 --~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~ 620 (689)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------------------ 208 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------------------ 208 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------------------
Confidence 223457899999999999999999999999999999999999999887666555444311
Q ss_pred hhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc---CHHHHHcCCCCCC
Q 005590 621 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 687 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp---Ta~ElL~hpwf~~ 687 (689)
...+|. ..+..+++||.+||+.||.+|| ++.|+|+||||.+
T Consensus 209 -----------------~~~~~~---------~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 209 -----------------PLRFPD---------GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred -----------------CCCCCC---------cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 001111 2345688999999999999997 5899999999985
No 71
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.9e-39 Score=352.52 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=201.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|+++++||+|+||+||++++..+++.||||++.+.. .....+.+|+++++.+ +||||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~~~ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES------DSPWVVSLYYSFQDAQ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC
Confidence 47999999999999999999999999999999987542 2234566677777765 4789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.|+||||+. ++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfG 146 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFG 146 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeecc
Confidence 9999999997 46777665322 2889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC--------------------------------------------------ccccccCccccChhhhcCCCCC
Q 005590 536 SSCFQTDN--------------------------------------------------LCLYVQSRSYRAPEVIIGLPYD 565 (689)
Q Consensus 536 ls~~~~~~--------------------------------------------------~~~~~gt~~Y~APE~l~~~~~s 565 (689)
+++..... ....+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 88532110 0024689999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccc
Q 005590 566 QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES 645 (689)
Q Consensus 566 ~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 645 (689)
.++|||||||++|+|++|..||.+.+..+.+..+..... ...+|..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~p~~- 272 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE---------------------------------TLYFPDD- 272 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC---------------------------------ccCCCCC-
Confidence 999999999999999999999988776665555431100 0011111
Q ss_pred hhhhhccCCcHHHHHHHHHhcccCCCCC---cCHHHHHcCCCCCC
Q 005590 646 SLEHHLQFSDAFFIDFVRTLLEINPQRR---PTAREALDHPWLQH 687 (689)
Q Consensus 646 ~l~~~~~~~~~~l~dLI~~mL~~dP~kR---pTa~ElL~hpwf~~ 687 (689)
...+.++.+||++||. +|.+| +|+.|+++||||+.
T Consensus 273 ------~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 273 ------IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred ------CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 1134668899999998 67765 59999999999974
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.2e-39 Score=343.33 Aligned_cols=244 Identities=25% Similarity=0.434 Sum_probs=199.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|+++.+++.||||++..+. ........|..++..+. .||||+++++++...+.+++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999997542 22345556666666543 4889999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecC
Confidence 99985 6665554322 2889999999999999999999999999999999999985 7889999999976532
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~--------------- 212 (320)
T cd05590 148 FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--------------- 212 (320)
T ss_pred cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC---------------
Confidence 22334578999999999999999999999999999999999999999887766665553110
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH------HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA------REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa------~ElL~hpwf~~ 687 (689)
..+|. ..+..+++||++||+.||.+|+++ +++++||||+.
T Consensus 213 --------------------~~~~~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 213 --------------------VVYPT---------WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred --------------------CCCCC---------CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 01111 124568899999999999999998 99999999975
No 73
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.3e-39 Score=351.48 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=202.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+|+++++||+|+||+||+|++..+++.||+|++.... .....+.+|+.+++.++ |+||+++++.|...+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~------h~~iv~~~~~~~~~~ 74 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDKD 74 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC------CCcCCeEEEEEEeCC
Confidence 36999999999999999999999999999999997542 23445667888887764 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFG 146 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 146 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECC
Confidence 99999999985 6766664322 2788999999999999999999999999999999999984 7889999999
Q ss_pred CcccccC--------------------------------------------------CccccccCccccChhhhcCCCCC
Q 005590 536 SSCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYD 565 (689)
Q Consensus 536 ls~~~~~--------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s 565 (689)
++..... .....+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 226 (382)
T cd05625 147 LCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT 226 (382)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC
Confidence 8642110 00124689999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccc
Q 005590 566 QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES 645 (689)
Q Consensus 566 ~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 645 (689)
.++|||||||++|+|++|++||.+.+..+....+.... ....+|..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------------------------~~~~~p~~- 272 (382)
T cd05625 227 QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQ---------------------------------TSLHIPPQ- 272 (382)
T ss_pred CeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccC---------------------------------CCcCCCCc-
Confidence 99999999999999999999998876655544443110 01111211
Q ss_pred hhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHHHHcCCCCCC
Q 005590 646 SLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 687 (689)
Q Consensus 646 ~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~hpwf~~ 687 (689)
...++++++||.+|+ .+|.+|++ ++|+++||||+.
T Consensus 273 ------~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 273 ------AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred ------ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 123466889999986 59999998 999999999975
No 74
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.9e-38 Score=337.18 Aligned_cols=285 Identities=26% Similarity=0.425 Sum_probs=209.2
Q ss_pred EEeccCCCCceEEEEECC--CCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--CCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~--tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~--~~~l~lVm 462 (689)
.+||+|+||+||+|++.. ++..||+|.+.... ......+|+.+++.++ ||||+++++++.. ....++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELK------HPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCC------CCCeeeEEEEEeccCCCeEEEEE
Confidence 579999999999999653 66889999987543 2245678888888774 6799999999864 46789999
Q ss_pred EccccchHHHHhhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--cCCCeEEEEecCCc
Q 005590 463 ELLRANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKIIDLGSS 537 (689)
Q Consensus 463 Ey~~g~L~~l~~~~~~~---~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~--~~~~~vkL~DFGls 537 (689)
||+.+++.+++...... .....+++..++.++.||+.||.|||+.||+||||||+|||+.. ..++.+||+|||++
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 99999988887643321 12234888999999999999999999999999999999999953 24678999999999
Q ss_pred ccccCC------ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHHHHHHHh
Q 005590 538 CFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARIIG 601 (689)
Q Consensus 538 ~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~---------~~~l~~i~~ 601 (689)
+..... .....+|+.|+|||++.+. .++.++|||||||++|+|++|++||..... ...+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 765432 1234678999999999774 588999999999999999999999975332 345667777
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCcc-chhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE-SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
.++.+..+.|........+........ ...+..+.. ..........+..+.+||.+||+.||.+|||+.|+|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l 312 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFR-------RTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQAL 312 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhc-------ccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHh
Confidence 788777766655433322111000000 000000000 000111112345688999999999999999999999
Q ss_pred cCCCC
Q 005590 681 DHPWL 685 (689)
Q Consensus 681 ~hpwf 685 (689)
+||||
T Consensus 313 ~hp~f 317 (317)
T cd07867 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 99998
No 75
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.3e-39 Score=344.61 Aligned_cols=244 Identities=26% Similarity=0.390 Sum_probs=198.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||.||++++..+++.||+|++.... .......+|+++++.+ .||||+++++++...++.++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT------RHPFLTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999997542 2334556677777665 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 75 Ey~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 75 EYVNGGELFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (328)
T ss_pred eCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCC
Confidence 99985 565554322 13889999999999999999999999999999999999984 7889999999987532
Q ss_pred C---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~---------------- 210 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------------- 210 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC----------------
Confidence 2 223457899999999999989999999999999999999999999876655544433210
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQHP 688 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~~ 688 (689)
...+|. ..+..+.+||++||+.||++|+ ++.|+++||||...
T Consensus 211 -------------------~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 211 -------------------DIKFPR---------TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred -------------------CccCCC---------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 011111 1345688999999999999997 89999999999763
No 76
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-38 Score=341.03 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=203.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+|++.+.||+|+||+||+|++..+++.||||++.+... .......|..++..+. .|++|+++++++...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEecCCE
Confidence 48899999999999999999999999999999986431 2233455666655543 46899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|.+.+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~ 147 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCC
Confidence 9999999985 6666654322 2889999999999999999999999999999999999985 78899999999
Q ss_pred ccccc---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--------- 218 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--------- 218 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------
Confidence 86532 223345789999999999999999999999999999999999999998877766665542111
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
.+|. ..+..+.+||.+||+.||++|++ ..++++||||+.
T Consensus 219 --------------------------~~p~---------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 219 --------------------------AYPK---------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred --------------------------CCCC---------cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 1111 12456889999999999999998 489999999974
No 77
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=340.02 Aligned_cols=253 Identities=31% Similarity=0.515 Sum_probs=218.6
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
-+..||++.+.||+|.||+|-+|.+...|+.||||.+++++ ...-.+.+|++||..|+ ||||+++|.+|.
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN------HPhII~IyEVFE 123 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN------HPHIIQIYEVFE 123 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC------CCceeehhhhhc
Confidence 45679999999999999999999999999999999998754 33345667888888775 789999999999
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
..+.+.|||||.. |.|++++...+. +++.+++.+++||+.|+.|+|+++++|||||.+|||++ +++.+||+
T Consensus 124 NkdKIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD--~N~NiKIA 195 (668)
T KOG0611|consen 124 NKDKIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD--QNNNIKIA 195 (668)
T ss_pred CCceEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec--CCCCeeee
Confidence 9999999999998 579999987654 99999999999999999999999999999999999999 58899999
Q ss_pred ecCCcccccCC--ccccccCccccChhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 533 DLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 533 DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s-~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
|||++-.+.+. ..++||+|-|.+||++.+.+|. ..+|.|||||+||-|..|..||.+.+...+..+|..
T Consensus 196 DFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~-------- 267 (668)
T KOG0611|consen 196 DFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR-------- 267 (668)
T ss_pred ccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc--------
Confidence 99999877654 4568999999999999999876 689999999999999999999999988887777641
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 689 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~~ 689 (689)
..|.-|..+ ..+.-||+.||-.||++|.|+.++..|=|++=.|
T Consensus 268 ---------------------------GaYrEP~~P----------SdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy 310 (668)
T KOG0611|consen 268 ---------------------------GAYREPETP----------SDASGLIRWMLMVNPERRATIEDIASHWWVNWGY 310 (668)
T ss_pred ---------------------------ccccCCCCC----------chHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence 112222221 2345799999999999999999999999987544
No 78
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.7e-40 Score=331.46 Aligned_cols=292 Identities=29% Similarity=0.440 Sum_probs=233.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..|++++.||+|.||.||+|..+.++. .+|||.++.++ .......+|+.++++++ |+||+.+..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~------h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK------HPNVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc------CCcchhHHHHHh
Confidence 468999999999999999996544433 68999998653 23456779999999996 578999999998
Q ss_pred e-CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc--CCCeEE
Q 005590 454 H-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIK 530 (689)
Q Consensus 454 ~-~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~--~~~~vk 530 (689)
. ...+++++||.+.+|+..++++..... ..++...++.|+.||+.|+.|||++-|+||||||.||||..+ +.|.||
T Consensus 98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 98 SHDKKVWLLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ccCceEEEEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7 788999999999999999998887666 579999999999999999999999999999999999999742 459999
Q ss_pred EEecCCcccccCCccc------cccCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCC---------hHHH
Q 005590 531 IIDLGSSCFQTDNLCL------YVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPND---------AVVM 594 (689)
Q Consensus 531 L~DFGls~~~~~~~~~------~~gt~~Y~APE~l~~~~-~s~~~DIwSLGvil~eLltG~~PF~~~---------~~~~ 594 (689)
|+|||+++....+... .+-|.+|+|||.++|.. |+.++|+|++|||+.||++-++.|.+. -..+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 9999999987765443 45689999999999865 999999999999999999999999653 3347
Q ss_pred HHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCC-ccchhhhhccCCcHHHHHHHHHhcccCCCCC
Q 005590 595 ILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIP-EESSLEHHLQFSDAFFIDFVRTLLEINPQRR 673 (689)
Q Consensus 595 ~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR 673 (689)
++.+|..++|.+..+.|+.-..+.++-..-.++.. .+..+ .....-+..+..++...+|+.+||+.||.+|
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~--------~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kR 328 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRR--------HYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKR 328 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHH--------hhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhh
Confidence 89999999999999988876665444221111000 00000 0111122233345557899999999999999
Q ss_pred cCHHHHHcCCCCCC
Q 005590 674 PTAREALDHPWLQH 687 (689)
Q Consensus 674 pTa~ElL~hpwf~~ 687 (689)
+|++++|+|+||..
T Consensus 329 Ita~qAleh~yF~~ 342 (438)
T KOG0666|consen 329 ITAEQALEHPYFTE 342 (438)
T ss_pred ccHHHHhccccccc
Confidence 99999999999975
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-38 Score=340.95 Aligned_cols=244 Identities=29% Similarity=0.431 Sum_probs=197.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||.||+|++..+|+.||+|+++... ........|..++..+ .+|++|+++++++...++.++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA-----WENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCCccCeeEEEEeCCEEEEEE
Confidence 36999999999999999999999999998642 2233445566665543 25789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc-
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 540 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~- 540 (689)
||+.+ +|..++... ..+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++...
T Consensus 76 E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecc
Confidence 99985 566655432 12889999999999999999999999999999999999984 778999999998642
Q ss_pred --cCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 541 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 541 --~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~---------------- 211 (316)
T cd05620 148 FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD---------------- 211 (316)
T ss_pred cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----------------
Confidence 22233467899999999999999999999999999999999999999887766555444211
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-~ElL~hpwf~~ 687 (689)
...+|. ..+..+++||++||+.||++|+++ +++++||||+.
T Consensus 212 -------------------~~~~~~---------~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 212 -------------------TPHYPR---------WITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred -------------------CCCCCC---------CCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 011111 134568899999999999999998 58889999976
No 80
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-38 Score=341.33 Aligned_cols=244 Identities=25% Similarity=0.395 Sum_probs=200.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||.||+|++..+++.||+|++..+. ........|.+++..+. .||+|++++++|...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCeEEEEE
Confidence 36899999999999999999999999997642 22344556777766553 4889999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGI 147 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceecc
Confidence 99985 5665554322 2888999999999999999999999999999999999984 7889999999986532
Q ss_pred C---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+...
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~---------------- 211 (321)
T cd05591 148 LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD---------------- 211 (321)
T ss_pred cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC----------------
Confidence 2 233457899999999999999999999999999999999999999988777666555311
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-------CHHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-------TAREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-------Ta~ElL~hpwf~~ 687 (689)
...+|. ..+.++.+||.+||+.||++|+ ++.++++||||+.
T Consensus 212 -------------------~~~~p~---------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 212 -------------------DVLYPV---------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred -------------------CCCCCC---------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 001111 1245688999999999999999 9999999999975
No 81
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.5e-39 Score=351.06 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=202.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.+. |+||+++++.|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD------NEWVVKLYYSFQDKD 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEEcCC
Confidence 47999999999999999999999999999999987532 22345667888888774 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG 146 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 146 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCC
Confidence 99999999974 6777765432 2788999999999999999999999999999999999984 7889999999
Q ss_pred CcccccC----------------------------------------------CccccccCccccChhhhcCCCCCchhh
Q 005590 536 SSCFQTD----------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQKID 569 (689)
Q Consensus 536 ls~~~~~----------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~~~D 569 (689)
++..... .....+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 8642110 011247899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhh
Q 005590 570 LWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEH 649 (689)
Q Consensus 570 IwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~ 649 (689)
||||||++|+|++|+.||.+....+....+.... ....+|..
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~---------------------------------~~~~~~~~----- 268 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWE---------------------------------TTLHIPSQ----- 268 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccC---------------------------------ccccCCCC-----
Confidence 9999999999999999998876655544432100 00111111
Q ss_pred hccCCcHHHHHHHHHhcccCCCCCc---CHHHHHcCCCCCC
Q 005590 650 HLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 687 (689)
Q Consensus 650 ~~~~~~~~l~dLI~~mL~~dP~kRp---Ta~ElL~hpwf~~ 687 (689)
...+..+.+||.+|+ .+|.+|+ |+.|+++||||+.
T Consensus 269 --~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 269 --AKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred --CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 113456789999977 5999999 9999999999975
No 82
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=305.91 Aligned_cols=278 Identities=31% Similarity=0.470 Sum_probs=234.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|.-.++||+|.||+|++|++..+++.||+|.++.+. ......++|+.++++++| .||++++++......+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh------knivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh------cceeehhhhhccCcee
Confidence 4666788999999999999999999999999998753 234678899999999974 5899999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
-+|+|||..+|..+...... .+..+.++.++.|+++||.++|+.++.||||||.|+||+. +|++||+|||+++
T Consensus 77 tlvfe~cdqdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~--ngelkladfglar 149 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR--NGELKLADFGLAR 149 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc--CCcEEecccchhh
Confidence 99999999999888765432 2888999999999999999999999999999999999995 8999999999998
Q ss_pred cccCCc-c--ccccCccccChhhhcCCC-CCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDNL-C--LYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~~-~--~~~gt~~Y~APE~l~~~~-~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
-.+-+. + ..+-|.+|++|.++.+.. |+...|+||.|||+.|+.. |++.|++.+..+++.+|...+|.+.++.|+.
T Consensus 150 afgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred hcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 766543 2 246699999999999865 8999999999999999987 8999999999999999999999999888877
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+.+|.. + ...|...++.+........-+||++++|.-+|.+|++|+++|+||||..
T Consensus 230 ~t~lpdyk~-----y----------p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 230 MTKLPDYKP-----Y----------PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cccCCCCcc-----c----------CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 655544321 1 1223333333333333344679999999999999999999999999975
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.2e-38 Score=341.44 Aligned_cols=243 Identities=25% Similarity=0.396 Sum_probs=198.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||.||++++..+|+.||+|+++... .......+|+++++.+ .||||+++++.|...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT------RHPFLTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCcceeeEEecCCEEEEEE
Confidence 36899999999999999999999999997642 2234455677777766 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 75 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 75 EYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhcccc
Confidence 99985 5655543221 3889999999999999999999999999999999999984 7889999999876532
Q ss_pred C---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~---------------- 210 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------------- 210 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------------
Confidence 2 223357899999999999999999999999999999999999999877665554443210
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
...+|. ..++.+.+||.+||+.||++|+ ++.++++||||.+
T Consensus 211 -------------------~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 211 -------------------EIRFPR---------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred -------------------CCCCCC---------CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 001111 1346688999999999999998 9999999999975
No 84
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-38 Score=344.76 Aligned_cols=277 Identities=25% Similarity=0.290 Sum_probs=205.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++ |+||+++++++......++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVN------HPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCC------CCCCcChhheEEeCCeeEE
Confidence 4799999999999999999999999999999986543 2346888887764 7899999999999999999
Q ss_pred EEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 461 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 461 VmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
||||+.++|.+++.... ..+++..++.|+.||+.||.|||+.||+||||||+|||++. .+.+||+|||++...
T Consensus 135 v~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEccCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCcccccc
Confidence 99999999888875432 23889999999999999999999999999999999999984 778999999998754
Q ss_pred cC--CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCC---------hHHHHHHHHHhhcCCCcH
Q 005590 541 TD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE-VLFPND---------AVVMILARIIGMLGPIDL 608 (689)
Q Consensus 541 ~~--~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~-~PF~~~---------~~~~~l~~i~~~~g~~~~ 608 (689)
.. ......||+.|+|||++.+..++.++|||||||++|+|+++. .+|... .....+..++..++..+.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 208 VVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred ccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 32 223457899999999999999999999999999999999854 444431 112334444444444333
Q ss_pred HHHhhh-hhh-hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQG-QEI-YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
+..... ... ..++.. .. ....|............+..+.+||.+||+.||.+||||.|||+||||+
T Consensus 288 ~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEY-------AS-----LERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred hcCCCCccHHHHHHHhh-------cc-----cCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 221100 000 001000 00 0000000000001112345677899999999999999999999999998
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
+
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 6
No 85
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.2e-38 Score=334.16 Aligned_cols=281 Identities=27% Similarity=0.413 Sum_probs=221.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~- 455 (689)
.++|++.+.||+|+||.||+|++..+|+.||+|+++.... ......+|+.+++.++ |+||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR------HPNIVELKEVVVGKH 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC------CCCCcceEEEEecCC
Confidence 3689999999999999999999999999999999875321 1234557888888774 67999999998755
Q ss_pred -CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 -EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 -~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+..++||||+.++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++.++|+||
T Consensus 80 ~~~~~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~df 152 (309)
T cd07845 80 LDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADF 152 (309)
T ss_pred CCeEEEEEecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcc
Confidence 5689999999998888776432 23889999999999999999999999999999999999984 788999999
Q ss_pred CCcccccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 535 GSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 535 Gls~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
|.+...... .....+++.|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+..+.+..+...++.++..+
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 998765432 222345778999999876 4588999999999999999999999999999999999988888777666
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
|.........- ...........+.......++.+.+||++||++||++|||+.++|+||||++
T Consensus 233 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 233 WPGFSDLPLVG--------------KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred chhhhcccccc--------------cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 55432221100 0000000001112222334677899999999999999999999999999985
No 86
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-38 Score=341.20 Aligned_cols=293 Identities=25% Similarity=0.346 Sum_probs=210.6
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+..++|++.++||+|+||.||++.+..++..+|+|++... ......+.+|+++++.++ |+||++++++|...
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 75 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSD 75 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCcccceeEEEEEC
Confidence 3457899999999999999999999999999999998754 233456778888888774 68999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEe
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
++.++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+. +|+|+||||+|||++. ++.+||+|
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~D 147 (333)
T cd06650 76 GEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCD 147 (333)
T ss_pred CEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEee
Confidence 999999999975 7777765432 278889999999999999999985 7999999999999984 77899999
Q ss_pred cCCcccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc-CCCcHHHH
Q 005590 534 LGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML-GPIDLEML 611 (689)
Q Consensus 534 FGls~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~-g~~~~e~~ 611 (689)
||++...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...........+.... +.......
T Consensus 148 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (333)
T cd06650 148 FGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESET 227 (333)
T ss_pred CCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccccc
Confidence 9998754332 234578999999999999889999999999999999999999998765544332221111 00000000
Q ss_pred h-h----hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 612 M-Q----GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 612 ~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
. . +.....+.......... ........... .........+.++++||.+||+.||++|||+.|+++||||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~ 303 (333)
T cd06650 228 SPRPRPPGRPLSSYGPDSRPPMAI---FELLDYIVNEP-PPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK 303 (333)
T ss_pred CcccCCccchhhhhcccccccccH---HHHHHHHhcCC-CccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence 0 0 00000000000000000 00000000000 00000112356789999999999999999999999999997
Q ss_pred CC
Q 005590 687 HP 688 (689)
Q Consensus 687 ~~ 688 (689)
..
T Consensus 304 ~~ 305 (333)
T cd06650 304 RS 305 (333)
T ss_pred cC
Confidence 64
No 87
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-38 Score=347.34 Aligned_cols=253 Identities=22% Similarity=0.366 Sum_probs=203.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|++.+.||+|+||.||++++..+++.+|+|++.+.. .....+.+|+.+++.+ .||||+++++++...
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~~ 115 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFCAFQDD 115 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEcC
Confidence 478999999999999999999999999999999987532 1223455677777655 478999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
.++++||||+.+ +|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DF 186 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEec
Confidence 999999999974 677766432 2788899999999999999999999999999999999984 788999999
Q ss_pred CCcccccCC----ccccccCccccChhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 535 GSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 535 Gls~~~~~~----~~~~~gt~~Y~APE~l~~~~----~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|++...... ....+||+.|+|||++.+.. ++.++|+|||||++|+|++|..||.+.+....+.+++....
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~-- 264 (370)
T cd05621 187 GTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN-- 264 (370)
T ss_pred ccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--
Confidence 998765432 13457999999999997643 78899999999999999999999988776666555542111
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hpw 684 (689)
...+|... ..+..+++||.+||+.++.+ |+|+.|+++|||
T Consensus 265 -------------------------------~~~~p~~~-------~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 265 -------------------------------SLNFPEDV-------EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred -------------------------------ccCCCCcc-------cCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 11112111 12456889999999866654 899999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|+.
T Consensus 307 ~~~ 309 (370)
T cd05621 307 FKN 309 (370)
T ss_pred cCC
Confidence 975
No 88
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.5e-38 Score=339.75 Aligned_cols=249 Identities=25% Similarity=0.416 Sum_probs=197.5
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~-----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
+|++.+.||+|+||+||++++. .+++.||+|++.+.. ........|+.+++.++ .|++|+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-----QSPFLVTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCcccEEEEEe
Confidence 4899999999999999999863 478999999987532 22345667888888775 3689999999999
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
..+.+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~ 147 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLT 147 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEe
Confidence 99999999999985 6766664322 2889999999999999999999999999999999999985 7889999
Q ss_pred ecCCcccccC----CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHhhc
Q 005590 533 DLGSSCFQTD----NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARIIGML 603 (689)
Q Consensus 533 DFGls~~~~~----~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~----~~~l~~i~~~~ 603 (689)
|||++..... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||..... ......+..
T Consensus 148 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-- 225 (332)
T cd05614 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-- 225 (332)
T ss_pred eCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--
Confidence 9999875422 12235789999999999875 478899999999999999999999964321 111111110
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHH
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TARE 678 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~E 678 (689)
....+|. ..+..+.+||.+||+.||++|| ++++
T Consensus 226 ---------------------------------~~~~~~~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 226 ---------------------------------CDPPFPS---------FIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ---------------------------------CCCCCCC---------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 0011111 1345688999999999999999 8999
Q ss_pred HHcCCCCCC
Q 005590 679 ALDHPWLQH 687 (689)
Q Consensus 679 lL~hpwf~~ 687 (689)
+++||||+.
T Consensus 264 ~l~h~~~~~ 272 (332)
T cd05614 264 IKEHPFFKG 272 (332)
T ss_pred HHcCCCcCC
Confidence 999999975
No 89
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.3e-38 Score=323.38 Aligned_cols=252 Identities=35% Similarity=0.562 Sum_probs=202.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhH---hHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD---QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~---~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
|++.+.||+|+||+||++++..+++.||+|++........ ...+|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR------HPNIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT------BTTBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc------cccccccccccccccccc
Confidence 8999999999999999999999999999999987643322 2345888888884 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ +|.+++.... .+++..+..++.||+.||.+||+.||+|+||||+||+++ .++.++|+|||.+.
T Consensus 75 ~v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~--~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD--ENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES--TTSEEEESSGTTTE
T ss_pred ccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc--cccccccccccccc
Confidence 99999997 7887776222 288999999999999999999999999999999999999 48889999999987
Q ss_pred cc---cCCccccccCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQ---TDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~---~~~~~~~~gt~~Y~APE~l~-~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
.. ........++..|+|||++. +..++.++|+||||+++|+|++|..||...........+...........
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 222 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS---- 222 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc----
Confidence 52 22334467899999999998 78899999999999999999999999987733333333221111000000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.. ........+.+||.+||+.||++|||+.++++||||
T Consensus 223 --------------------------~~-------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 223 --------------------------SQ-------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp --------------------------TT-------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred --------------------------cc-------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 00 000011568899999999999999999999999997
No 90
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-38 Score=346.37 Aligned_cols=253 Identities=23% Similarity=0.346 Sum_probs=204.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|+.+++.+ .||||+++++++...
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~------~h~~iv~~~~~~~~~ 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA------NSEWIVQLHYAFQDD 115 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCcceEEEEEecC
Confidence 468999999999999999999999999999999997532 2223455677777766 478999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
.+.++||||+.+ +|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEec
Confidence 999999999975 676665421 2788899999999999999999999999999999999984 789999999
Q ss_pred CCcccccCC----ccccccCccccChhhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 535 GSSCFQTDN----LCLYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 535 Gls~~~~~~----~~~~~gt~~Y~APE~l~~~----~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|++...... ....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+..+.....
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-- 264 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-- 264 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--
Confidence 998765432 2245789999999998754 378899999999999999999999988776665555531100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hpw 684 (689)
...+|... ..+.++++||++||+.+|.+ |+|++|+++|||
T Consensus 265 -------------------------------~~~~~~~~-------~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 265 -------------------------------SLTFPDDI-------EISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred -------------------------------cCCCCCcC-------CCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 01112111 13467899999999999998 999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|+.
T Consensus 307 ~~~ 309 (370)
T cd05596 307 FKN 309 (370)
T ss_pred cCC
Confidence 975
No 91
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-38 Score=342.32 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=203.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|.+.+.||+|+||+||++++..+|+.||+|+++.... ....+.+|+.+++.+ .|++|+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~~~~i~~~~~~~~~~~ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS------NSPWIPQLQYAFQDKD 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceeeEEecCC
Confidence 479999999999999999999999999999999986432 334455666666654 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg 147 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFG 147 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCC
Confidence 99999999974 6777765432 13889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCc----cccccCccccChhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 536 SSCFQTDNL----CLYVQSRSYRAPEVII------GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 536 ls~~~~~~~----~~~~gt~~Y~APE~l~------~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
++....... ....+|+.|+|||++. ...++.++|||||||++|+|++|..||...+....+..+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~- 226 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR- 226 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC-
Confidence 987654322 2246899999999987 45678999999999999999999999987766655555431100
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...+|.. ...+..+.+||++||+ +|.+|||+.++++||||
T Consensus 227 --------------------------------~~~~~~~-------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 227 --------------------------------FLKFPED-------PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred --------------------------------ccCCCCC-------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence 0011111 1134668899999998 99999999999999999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
+.
T Consensus 267 ~~ 268 (330)
T cd05601 267 SK 268 (330)
T ss_pred CC
Confidence 85
No 92
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.2e-38 Score=326.18 Aligned_cols=278 Identities=31% Similarity=0.512 Sum_probs=222.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||.|++|.||+|.+..+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ------HPYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC------CCCCcceeeEEecCCee
Confidence 5899999999999999999999999999999987542 23456777888887774 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||.+.
T Consensus 75 ~~v~e~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~ 147 (286)
T cd07832 75 VLVMEYMPSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLAR 147 (286)
T ss_pred EEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecc
Confidence 9999999778888775433 23889999999999999999999999999999999999985 7889999999887
Q ss_pred cccCC----ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
..... .....++..|+|||.+.+. .++.++|||||||++|+|++|.+||.+......+..+...++.+....+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred cccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 65432 2335678899999998754 468999999999999999999999998888888888888888777666654
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
......+-. ..........+.......+..+.+||.+||+.||++|||++++|+||||.
T Consensus 228 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 228 LTSLPDYNK--------------ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccCcchhhc--------------ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 333322110 00000001111222223457789999999999999999999999999984
No 93
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-38 Score=347.16 Aligned_cols=283 Identities=24% Similarity=0.346 Sum_probs=215.0
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEEC--CCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 376 NTVIAGRYYVTEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 376 ~~~l~~rY~i~~~LG~G~fG~Vyla~d~--~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..++..+|.+++.||.|+||.||++... .+++.||+|.+.... ...+|+++++.++ |+||+++++++.
T Consensus 87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~------h~~iv~~~~~~~ 156 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTIS------HRAIINLIHAYR 156 (392)
T ss_pred chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcC------CCCccceeeeEe
Confidence 3455678999999999999999999753 456889999887543 3457899998875 689999999999
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.....++|||++.++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.++|+|
T Consensus 157 ~~~~~~lv~e~~~~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~D 228 (392)
T PHA03207 157 WKSTVCMVMPKYKCDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGD 228 (392)
T ss_pred eCCEEEEEehhcCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcc
Confidence 99999999999999888877322 23899999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHhhcCC
Q 005590 534 LGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND---AVVMILARIIGMLGP 605 (689)
Q Consensus 534 FGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~---~~~~~l~~i~~~~g~ 605 (689)
||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+. .....+..+.+.++.
T Consensus 229 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~ 308 (392)
T PHA03207 229 FGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308 (392)
T ss_pred CccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhcc
Confidence 9998764432 12357899999999999999999999999999999999999999654 234556666666665
Q ss_pred CcHHHHhhhh-hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 606 IDLEMLMQGQ-EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 606 ~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.+.+...... ...+.+.... ......+.+|.. + .....+..+.+||++||+.||++|||+.|+|.|||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~--~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFKQYA-------IVLRPPYTIPPV--I--RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred CccccCCccchhHHHHHHhhc-------ccccCCccccch--h--hccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 5443221110 0111111000 000000111111 0 01123456889999999999999999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|++
T Consensus 378 f~~ 380 (392)
T PHA03207 378 FTK 380 (392)
T ss_pred hhc
Confidence 985
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-38 Score=341.46 Aligned_cols=244 Identities=25% Similarity=0.388 Sum_probs=196.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||++++..+|+.||+|++.... ........|+++++.+ .|+||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~------~hp~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS------RHPFLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999997642 2233445566666554 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
||+.+ +|...+... ..+++..++.++.||+.||.|||+ .||+||||||+|||++. ++.+||+|||++...
T Consensus 75 E~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 75 EYANGGELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEG 146 (325)
T ss_pred eCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeec
Confidence 99986 555544322 138899999999999999999997 79999999999999984 788999999998643
Q ss_pred c---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--------------- 211 (325)
T cd05594 147 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------- 211 (325)
T ss_pred CCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC---------------
Confidence 2 2223457899999999999999999999999999999999999999877655544443210
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQHP 688 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~~ 688 (689)
...+|. ..++.+.+||++||+.||++|+ ++.++++||||.+.
T Consensus 212 --------------------~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 212 --------------------EIRFPR---------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred --------------------CCCCCC---------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 011111 1346688999999999999997 99999999999863
No 95
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-38 Score=337.31 Aligned_cols=244 Identities=26% Similarity=0.415 Sum_probs=196.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+++.||+|+++.+.. .......|..++..+ ..||||+++++++....+.++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----WEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----cCCCCccceeeEEEcCCEEEEEE
Confidence 368999999999999999999999999986431 223334455554433 35899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENM 147 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECC
Confidence 99975 5665554322 2889999999999999999999999999999999999984 7889999999987532
Q ss_pred C---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-------------- 213 (316)
T cd05592 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP-------------- 213 (316)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------
Confidence 2 22345789999999999999999999999999999999999999988776665555431110
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-~ElL~hpwf~~ 687 (689)
.+|. ..+..+.+||.+||+.||++||++ .++++||||..
T Consensus 214 ---------------------~~~~---------~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 214 ---------------------HFPR---------WISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred ---------------------CCCC---------CCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 1111 124567899999999999999986 58889999975
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.5e-38 Score=337.07 Aligned_cols=244 Identities=26% Similarity=0.421 Sum_probs=199.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+++.||||++++.. ........|.++++.+. .|+||+++++++...+++++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 23345566777776664 4889999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++....
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecC
Confidence 99985 5655544321 2889999999999999999999999999999999999985 7889999999886421
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
......++++.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+.......+...
T Consensus 148 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~---------------- 211 (318)
T cd05570 148 LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED---------------- 211 (318)
T ss_pred cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC----------------
Confidence 2223457899999999999999999999999999999999999999887665555444210
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf~~ 687 (689)
...+|. ..+..+.+||++||+.||.+|||+ .++++||||+.
T Consensus 212 -------------------~~~~~~---------~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 212 -------------------EVRYPR---------WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred -------------------CCCCCC---------cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 001111 134568899999999999999999 99999999976
No 97
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.6e-38 Score=336.13 Aligned_cols=244 Identities=28% Similarity=0.447 Sum_probs=196.9
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+++.||||+++... ........|..++..+ ..||||+++++++...+++++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCcCcceEEEEEeCCEEEEEE
Confidence 36899999999999999999999999998642 2223444555555543 35899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENM 147 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECC
Confidence 99985 6766665322 2788999999999999999999999999999999999985 7789999999986432
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.......||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+..+....+...
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~---------------- 211 (316)
T cd05619 148 LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD---------------- 211 (316)
T ss_pred CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----------------
Confidence 2233457899999999999999999999999999999999999999877665555443210
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH-HHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR-EALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~-ElL~hpwf~~ 687 (689)
...+|. ..+..+.+||.+||+.||++||++. ++++||||+.
T Consensus 212 -------------------~~~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 212 -------------------NPCYPR---------WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred -------------------CCCCCc---------cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 001111 1235678999999999999999996 8999999975
No 98
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.7e-38 Score=343.73 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=203.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||+||++++..+++.||||+++... .....+.+|+.++..+ +|++|+++++.+...+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv~~~~~~~~~~ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA------DGAWVVKMFYSFQDKR 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence 46899999999999999999999999999999997532 2334556677777665 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+||||+. ++.++|+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG 146 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFG 146 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999985 6777665322 2889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC--------------------------------------ccccccCccccChhhhcCCCCCchhhHHHHHHHH
Q 005590 536 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 577 (689)
Q Consensus 536 ls~~~~~~--------------------------------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil 577 (689)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 87543210 1134789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHH
Q 005590 578 AELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAF 657 (689)
Q Consensus 578 ~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~ 657 (689)
|+|++|..||.+.+.......+.... ....+|... ..+..
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~---------------------------------~~~~~p~~~-------~~s~~ 266 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWK---------------------------------ETLVFPPEV-------PISEK 266 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCC---------------------------------CceecCCCC-------CCCHH
Confidence 99999999998877766655543110 011122111 13456
Q ss_pred HHHHHHHhcccCCCCCc---CHHHHHcCCCCCC
Q 005590 658 FIDFVRTLLEINPQRRP---TAREALDHPWLQH 687 (689)
Q Consensus 658 l~dLI~~mL~~dP~kRp---Ta~ElL~hpwf~~ 687 (689)
+++||.+|+ .||.+|+ ++.|+++||||++
T Consensus 267 ~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 267 AKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred HHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence 889999987 4999998 4899999999985
No 99
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.6e-37 Score=326.08 Aligned_cols=278 Identities=27% Similarity=0.423 Sum_probs=215.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||+|++|.||++++..+++.||+|.+..... ......+|+.+++.++ |+||+++++++...++.
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 78 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK------HANIVTLHDIIHTKKTL 78 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC------CcceeeEEEEEecCCeE
Confidence 689999999999999999999998999999999875421 2234567888888775 67999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++|.+++..... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++.
T Consensus 79 ~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~ 151 (291)
T cd07844 79 TLVFEYLDTDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLAR 151 (291)
T ss_pred EEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECcccccc
Confidence 99999999988877653321 3789999999999999999999999999999999999985 7789999999986
Q ss_pred cccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~-~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
..... .....++..|+|||++.+ ..++.++|+||+||++|+|++|..||.... ..+.+..+...++.+..+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07844 152 AKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231 (291)
T ss_pred ccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhh
Confidence 54321 222346788999999876 458899999999999999999999997654 5566677777777766666554
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCc--HHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSD--AFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~--~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+...... ......+........ ..+.++|.+||+.+|++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 232 VSSNPEFKPYSFP--------------FYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhcccccccccc--------------ccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 4332221111000 000001111111122 567899999999999999999999999998
No 100
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.7e-37 Score=326.17 Aligned_cols=283 Identities=29% Similarity=0.460 Sum_probs=219.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+|+.+++.+.+ |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-----SIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-----CCCccceeeeEeecCC
Confidence 479999999999999999999999999999999875422 23466788988888853 5799999999987665
Q ss_pred -----EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 458 -----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 458 -----l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.++||||+.+++.+++...... ....+++..++.++.||+.||.|||+.||+||||||+||+++. .++.++|+
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~ 153 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIA 153 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEe
Confidence 8999999999988887644322 1234899999999999999999999999999999999999984 36789999
Q ss_pred ecCCcccccCCc---cccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 533 DLGSSCFQTDNL---CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 533 DFGls~~~~~~~---~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
|||++....... ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+....+.++...++.++.
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999987543321 22356788999999865 45789999999999999999999999988777777777777666655
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
..+........+..- ....+ ..........+..+.+||.+||..||.+|||+.|+|.||||+
T Consensus 234 ~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 234 QVWPGVSKLRDWHEF--------------PQWKP--QDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhCcchhhccchhhc--------------Ccccc--hhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 554433222211100 00000 001111123456789999999999999999999999999995
No 101
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.6e-38 Score=334.93 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=202.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+|++.+.||+|+||+||+|+++.+|+.||+|++..+. ........|..++..+. .|++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-----KPPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCchhheeeEEecCCE
Confidence 4788999999999999999999999999999998642 22344556777766554 35689999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~ 147 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEecccc
Confidence 9999999985 6666554322 2889999999999999999999999999999999999985 78899999999
Q ss_pred cccccC---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+..... ......||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.........+....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~---------- 217 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN---------- 217 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----------
Confidence 865322 2234568999999999999999999999999999999999999998877666655553111
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
..+|. ..+..+.+||.+||+.||.+|++ ..++++||||+.
T Consensus 218 -------------------------~~~p~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 218 -------------------------VSYPK---------SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred -------------------------CCCCc---------cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 01111 12356789999999999999997 589999999985
No 102
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.7e-38 Score=337.21 Aligned_cols=253 Identities=21% Similarity=0.340 Sum_probs=194.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||++++..+++.||+|+++... .....+.+|..+++.+. +||||++++++|.....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 22345667777777664 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc-
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 540 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~- 540 (689)
||+.+ +|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~g~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccc
Confidence 99986 565555432 12899999999999999999999999999999999999985 788999999998642
Q ss_pred --cCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 541 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 541 --~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||......... .....+. ..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~-------~~~~~~~------~~ 214 (329)
T cd05588 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP-------DQNTEDY------LF 214 (329)
T ss_pred cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc-------cccchHH------HH
Confidence 22334467899999999999999999999999999999999999999632110000 0000000 00
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC------HHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT------a~ElL~hpwf~~ 687 (689)
+.. ......+|. ..+..+.+||++||+.||.+|+| +.++++||||..
T Consensus 215 ~~~-------------~~~~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 215 QVI-------------LEKQIRIPR---------SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHH-------------HcCCCCCCC---------CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 000 000111221 23456889999999999999997 799999999975
No 103
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-37 Score=328.58 Aligned_cols=279 Identities=32% Similarity=0.465 Sum_probs=219.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~------~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+|++.+.||.|++|.||+|.+..+++.||+|.++.... ....+..|+.+++.++ |+||+++++++...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK------HPNIIGLLDVFGHK 74 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC------CCCChhhhheeecC
Confidence 58899999999999999999999999999999976432 1234456777777664 78999999999999
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 456 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 456 ~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+..++||||+.++|.+++.... ..+++..+..++.||++||.|||+.||+|+||||+||+++. ++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg 147 (298)
T cd07841 75 SNINLVFEFMETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFG 147 (298)
T ss_pred CEEEEEEcccCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccce
Confidence 9999999999778888775432 13889999999999999999999999999999999999995 7889999999
Q ss_pred CcccccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 536 SSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 536 ls~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
++...... .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+....+.+.++...++.+...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred eeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence 98765432 223356788999999865 45789999999999999999999999888877778888777777666665
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 689 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~~ 689 (689)
........+... ...............+..+++||.+||++||++|||+.|+|+||||++.+
T Consensus 228 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 228 PGVTSLPDYVEF----------------KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hhcccccccccc----------------cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 543332221110 00001111112223356789999999999999999999999999999853
No 104
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-37 Score=330.27 Aligned_cols=287 Identities=29% Similarity=0.491 Sum_probs=216.9
Q ss_pred cEEEEEEeccCCCCceEEEEECC--CCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~--tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+|++.++||+|+||.||+|++.. +++.||+|++.... .......+|+.+++.++ ||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK------HENVVSLVEVFLEH 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC------CCCccceEEEEeCC
Confidence 58999999999999999999988 89999999998632 23356677888888774 68999999999988
Q ss_pred --CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--cCCCeEEE
Q 005590 456 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKI 531 (689)
Q Consensus 456 --~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~--~~~~~vkL 531 (689)
..+++||||+++++.+++....... ...+++..++.++.||+.||.|||+.+|+||||||+||+++. ..++.+||
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 75 ADKSVYLLFDYAEHDLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred CCceEEEEEeCCCcCHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 8899999999998888776443322 234899999999999999999999999999999999999984 12688999
Q ss_pred EecCCcccccCCcc------ccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHH
Q 005590 532 IDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMI 595 (689)
Q Consensus 532 ~DFGls~~~~~~~~------~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~---------~~~ 595 (689)
+|||++........ ...+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+... ...
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 154 GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 99999876543222 24668889999998764 588999999999999999999999975433 235
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhh---ccCCcHHHHHHHHHhcccCCCC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHH---LQFSDAFFIDFVRTLLEINPQR 672 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~---~~~~~~~l~dLI~~mL~~dP~k 672 (689)
+..+...++.++...+........+.... .. ......+. ..+... ....+..+.++|.+||+.||++
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLM-------KD--FKTKTYPS-NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhh-------hh--ccCCCCCC-ccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 66677777776666554333322211100 00 00001110 111111 1134567899999999999999
Q ss_pred CcCHHHHHcCCCC
Q 005590 673 RPTAREALDHPWL 685 (689)
Q Consensus 673 RpTa~ElL~hpwf 685 (689)
|||+.|+++||||
T Consensus 304 Rps~~eil~~~~f 316 (316)
T cd07842 304 RITAEEALEHPYF 316 (316)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999998
No 105
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.5e-37 Score=324.82 Aligned_cols=277 Identities=30% Similarity=0.464 Sum_probs=218.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++++.||.|++|.||+|++..+|+.||||.+..+. .....+.+|+++++.++ |+||+++++++...+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC------CCCCcchhhhcccCCcE
Confidence 4889999999999999999999999999999887542 12245677888888774 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++|.+++..... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~ 148 (284)
T cd07860 75 YLVFEFLHQDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLAR 148 (284)
T ss_pred EEEeeccccCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchh
Confidence 99999998888777654321 23889999999999999999999999999999999999985 7789999999986
Q ss_pred cccCCc---cccccCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDNL---CLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~~---~~~~gt~~Y~APE~l~~~~-~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ....+++.|+|||++.+.. ++.++|+|||||++|+|+||+.||...+....+.++....+.++...+...
T Consensus 149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 149 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred hcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 543321 2235678899999987654 688999999999999999999999998888888888888887776665543
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+... ..... ...........++.+++||.+||+.||++|||+.++|+||||
T Consensus 229 ~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPS-------------FPKWA--RQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHHHhh-------------ccccc--ccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 332211110 00000 000111112345678899999999999999999999999998
No 106
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.7e-37 Score=323.64 Aligned_cols=279 Identities=26% Similarity=0.388 Sum_probs=215.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+|+.+++.+. |+||+++++++......
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~~ 78 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK------HANIVLLHDIIHTKETL 78 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC------CCCEeEEEEEEecCCeE
Confidence 68999999999999999999999999999999987542 22235567888888774 67999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.+++++.+.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 79 ~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~ 151 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLAR 151 (291)
T ss_pred EEEEecccCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEecccccc
Confidence 9999999988877664322 12678889999999999999999999999999999999984 7889999999886
Q ss_pred cccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
..... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||... ...+.+.++...++.++..++..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 53322 2234568899999998764 5788999999999999999999999764 44567777777788777666655
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccc-hhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEES-SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+...... ...+... ...... .....+.+||.+||..||++|||+.|++.||||
T Consensus 232 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 232 VSKLPNYKPEWFL------------PCKPQQLRVVWKRL-SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcccccchhcc------------ccCCcchhhhcccc-CCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 4433322111000 0000000 000000 114568899999999999999999999999997
No 107
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.2e-37 Score=321.43 Aligned_cols=273 Identities=33% Similarity=0.513 Sum_probs=213.8
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC--CeE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EHL 458 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--~~l 458 (689)
|++.+.||+|+||.||++++..+++.+|+|+++.... ......+|+.+++.+. +|+||+++++++.+. +.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecCCCCcE
Confidence 6789999999999999999999999999999875421 1223345666666553 478999999999987 899
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.+++++.+.... ..+++..++.++.||+.||.|||+.|++||||+|+||+++. +.+||+|||++.
T Consensus 76 ~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~ 147 (282)
T cd07831 76 ALVFELMDMNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCR 147 (282)
T ss_pred EEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEeccccc
Confidence 9999999998888765432 23889999999999999999999999999999999999984 889999999987
Q ss_pred cccCC--ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~~--~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... .....+++.|+|||.+.. ..++.++|+|||||++|+|++|..||.+.+..+.+..+...++.++..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 65332 233467889999998754 457889999999999999999999999988888888888888877766522110
Q ss_pred hhhhhhhccccchhhhhccccccccCCc--cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.. ......+|. ...........+..+++||.+||+.||++|||+.++++||||
T Consensus 228 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 228 KS-----------------RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cc-----------------ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00 000111111 011111222346779999999999999999999999999997
No 108
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.2e-38 Score=334.96 Aligned_cols=243 Identities=27% Similarity=0.421 Sum_probs=197.4
Q ss_pred EEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 387 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~-----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+.||+|+||.||++++. .+++.||+|+++... .......+|+.+++.++ ||||++++++|...+..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~~~~~~~~~~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK------HPFIVDLIYAFQTGGKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC------CCchhceeeEEecCCeE
Confidence 67999999999999863 478899999997532 12234567888887764 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+.+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~ 147 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLC 147 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCC
Confidence 999999985 6666654322 2788899999999999999999999999999999999984 788999999998
Q ss_pred ccccC---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+....
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~----------- 216 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK----------- 216 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 64322 2233578999999999999889999999999999999999999998876665555443110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
..+|. ..+..+.+||++||+.||++|| ++.++++||||..
T Consensus 217 ------------------------~~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 217 ------------------------LNLPP---------YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred ------------------------CCCCC---------CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 11111 1245688999999999999999 8999999999975
No 109
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.9e-37 Score=333.42 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=200.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||+||++++..+++.||+|++.+.. .....+.+|+.+++.+ .|+||++++++|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG------DRRWITNLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCceEEEEecCC
Confidence 47999999999999999999999999999999997532 2233455666666654 4789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg 147 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFG 147 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECC
Confidence 9999999997 47777765322 12889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCc----cccccCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 536 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 536 ls~~~~~~~----~~~~gt~~Y~APE~l~~-----~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
++....... ....||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-- 225 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--
Confidence 986543321 22468999999999973 4578899999999999999999999988766665555431100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hpw 684 (689)
...+|.. ....+..+++||++||..++++ |+++.++++|||
T Consensus 226 -------------------------------~~~~~~~------~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 226 -------------------------------HFQFPPD------VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred -------------------------------cccCCCc------cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 0011110 0113466889999999765544 889999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|..
T Consensus 269 ~~~ 271 (331)
T cd05597 269 FEG 271 (331)
T ss_pred CCC
Confidence 975
No 110
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.7e-37 Score=326.38 Aligned_cols=280 Identities=26% Similarity=0.431 Sum_probs=215.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC-
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE- 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~- 456 (689)
++|++.+.||+|+||.||+|++..+++.||||++.... .......+|+.+++.++ ||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKAT 85 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC------CCCccceEEEEecccc
Confidence 67999999999999999999999999999999986532 12234456788877774 679999999887543
Q ss_pred -------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 457 -------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 457 -------~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
..++||||+.+++.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~ 158 (310)
T cd07865 86 PYNRYKGSFYLVFEFCEHDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGIL 158 (310)
T ss_pred cccCCCceEEEEEcCCCcCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCcE
Confidence 469999999988877765322 23899999999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCCc-------cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 005590 530 KIIDLGSSCFQTDNL-------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 530 kL~DFGls~~~~~~~-------~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~ 601 (689)
||+|||++....... ....++..|+|||.+.+. .++.++|+||||+++|+|++|.+||.+.+....+..+..
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~ 238 (310)
T cd07865 159 KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQ 238 (310)
T ss_pred EECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999986543221 124567889999998764 478899999999999999999999999888888888888
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..+.++.+++........+-.-.. . .......+. .+ .....+..+.+||.+||..||.+|||++|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~--~l--~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMEL----P----QGQKRKVKE--RL--KPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhccC----C----CccchhhHH--hc--ccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 888888877665533221110000 0 000000000 00 00112456789999999999999999999999
Q ss_pred CCCC
Q 005590 682 HPWL 685 (689)
Q Consensus 682 hpwf 685 (689)
||||
T Consensus 307 h~~f 310 (310)
T cd07865 307 HDFF 310 (310)
T ss_pred CCCC
Confidence 9998
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.7e-37 Score=326.05 Aligned_cols=254 Identities=24% Similarity=0.286 Sum_probs=202.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.|++.++||+|+||+||++.+..+++.||+|++.... .......+|+.+++.++ |++|+++++++...++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC------CCCEeeeeeeecCCCe
Confidence 4889999999999999999999999999999987532 11234567888887774 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|.+.+.... ...+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCC
Confidence 9999999985 5655543221 123889999999999999999999999999999999999984 78899999999
Q ss_pred cccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 537 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 537 s~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
+...... .....+++.|+|||++.+..++.++|+||+||++|+|++|+.||.+.........+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--------- 219 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--------- 219 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh---------
Confidence 8765332 22357899999999999989999999999999999999999999876543333222111000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
....++ ...+..+.+||.+||+.||.+|| +++++++||||..
T Consensus 220 ----------------------~~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 220 ----------------------DQEEYS---------EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred ----------------------cccccC---------cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 000011 11345688999999999999999 9999999999985
No 112
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=347.90 Aligned_cols=280 Identities=24% Similarity=0.308 Sum_probs=205.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
...+|.+.+.||+|+||.||++.+..+++.||||.... ....+|+++++.++ |+||+++++++...+..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~------HpnIv~l~~~~~~~~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLS------HPAVLALLDVRVVGGLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCC------CCCCCcEEEEEEECCEE
Confidence 35689999999999999999999999999999996432 34568999998875 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++|||++.++|.+++..... .+++..++.|+.||+.||.|||+.||+||||||+||||+. ++.+||+|||+++
T Consensus 236 ~lv~e~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~ 308 (461)
T PHA03211 236 CLVLPKYRSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAAC 308 (461)
T ss_pred EEEEEccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCce
Confidence 99999999998887754321 3899999999999999999999999999999999999984 7789999999987
Q ss_pred cccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC-CCC------hHHHHHHHHHhhcCCC
Q 005590 539 FQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLF-PND------AVVMILARIIGMLGPI 606 (689)
Q Consensus 539 ~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF-~~~------~~~~~l~~i~~~~g~~ 606 (689)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..|+ ... .....+.+++...+..
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 64332 12356899999999999999999999999999999999987654 221 1112233333322211
Q ss_pred cHHHHhh-hhhhhhhhhccccchhhhhccccccccCCc-cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 607 DLEMLMQ-GQEIYKYFTKEYDLYYINEETNQLEYIIPE-ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
..+.-.. .......+. ... .....+. ....+..+...+..+.+||.+||+.||.+|||+.|||+|||
T Consensus 389 ~~~~~~~~~~~l~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 389 VDEFPQHAGSRLVSQYR--------HRA---ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred cccCCCCcchHHHHHHH--------hhh---hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 1100000 000000000 000 0000110 00011112234567889999999999999999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|+.
T Consensus 458 f~~ 460 (461)
T PHA03211 458 FQS 460 (461)
T ss_pred cCC
Confidence 986
No 113
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7e-37 Score=319.55 Aligned_cols=276 Identities=29% Similarity=0.467 Sum_probs=212.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.+.||+|++|.||+|.+..+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++.....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK------HPNLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC------CCCEeeeeeEEeeCCE
Confidence 47999999999999999999999999999999986532 12345667888888774 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+++++++.+.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~ 147 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFA 147 (286)
T ss_pred EEEEEeccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccc
Confidence 99999999987666554322 12889999999999999999999999999999999999984 778999999998
Q ss_pred ccccCCc---cccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
....... ....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+....+.+..+...++.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 7654332 23457889999999876 4578999999999999999999999998877777766665555443321111
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCc---cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPE---ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.. ...+... ...|. ...........+..+.+||.+||+.+|++|||+.|++.||||
T Consensus 228 ~~-~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 228 FS-TNQFFKG---------------LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cc-ccccccc---------------ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00 0000000 00111 001111222345778999999999999999999999999998
No 114
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.3e-37 Score=322.90 Aligned_cols=281 Identities=28% Similarity=0.451 Sum_probs=219.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.+.||.|++|.||++++..+|+.||+|.+.... .....+.+|+.+++.++ |+||+++++++....+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ------HGNIVRLQDVVHSEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc------CCCEeeEEEEEecCCe
Confidence 57999999999999999999999999999999986532 22345667888888774 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+++++.+.+..... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. .++.+||+|||++
T Consensus 76 ~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~-~~~~~kl~dfg~~ 150 (294)
T PLN00009 76 LYLVFEYLDLDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR-RTNALKLADFGLA 150 (294)
T ss_pred EEEEEecccccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC-CCCEEEEcccccc
Confidence 999999999888777653321 22678888999999999999999999999999999999984 3467999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
...... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|.+||......+.+.++...++.+....|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 654322 2234568899999998764 578999999999999999999999998888777777777777766666554
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
......+... .. ..+. ..........++++.+||.+||+.+|++||++.++|+||||+.
T Consensus 231 ~~~~~~~~~~-------------~~-~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 231 VTSLPDYKSA-------------FP-KWPP-KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred cccchhhhhh-------------cc-cCCC-CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 3332222110 00 0000 0111112234567899999999999999999999999999975
No 115
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-37 Score=334.68 Aligned_cols=253 Identities=21% Similarity=0.328 Sum_probs=192.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+++.||+|++++.. .......+|+.++..+. .||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeCCEEEEEE
Confidence 36899999999999999999999999998632 22344556776666553 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCcccccc
Confidence 99986 555544322 23889999999999999999999999999999999999985 7889999999986532
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.......||+.|+|||++.+..++.++|+|||||++|+|++|..||........ +. ........
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-----------~~--~~~~~~~~ 214 (329)
T cd05618 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN-----------PD--QNTEDYLF 214 (329)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC-----------cc--cccHHHHH
Confidence 223346789999999999999999999999999999999999999952110000 00 00000000
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC------HHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT------a~ElL~hpwf~~ 687 (689)
+.. ......+|. ..+..+.+||++||+.||++||| +.++++||||+.
T Consensus 215 ~~i-------------~~~~~~~p~---------~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 215 QVI-------------LEKQIRIPR---------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HHH-------------hcCCCCCCC---------CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 000 000111222 23456889999999999999998 589999999975
No 116
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.4e-38 Score=334.35 Aligned_cols=244 Identities=24% Similarity=0.363 Sum_probs=193.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+|+.||+|++..... .......|..++. ....||||+++++.+...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~-----~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLL-----KNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHH-----hhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 368999999999999999999999999975421 1122333333221 1235899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGI 147 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCcccc
Confidence 99986 5666554322 3889999999999999999999999999999999999984 7889999999986532
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------------- 212 (323)
T cd05575 148 EHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP--------------- 212 (323)
T ss_pred cCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 22334578999999999999999999999999999999999999998876666555443100
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH----HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa----~ElL~hpwf~~ 687 (689)
..++ ...+..+.+||++||+.||.+||++ .++++||||..
T Consensus 213 --------------------~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 213 --------------------LRLK---------PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred --------------------CCCC---------CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 0011 0124568899999999999999998 69999999964
No 117
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.3e-37 Score=340.18 Aligned_cols=254 Identities=22% Similarity=0.342 Sum_probs=202.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..++|++.+.||+|+||.||++++..+++.+|+|++.... .....+.+|+.+++.+ .||||+++++++..
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~ 114 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFYAFQD 114 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCeEEEEEEc
Confidence 3478999999999999999999999999999999987522 1223455667776655 47899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
..++++||||+.+ +|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~D 185 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLAD 185 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEe
Confidence 9999999999975 677666422 2788899999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCC----ccccccCccccChhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 534 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 534 FGls~~~~~~----~~~~~gt~~Y~APE~l~~~~----~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
||++...... ....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+......++......
T Consensus 186 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 265 (371)
T cd05622 186 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 265 (371)
T ss_pred CCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 9998765432 22457999999999997643 788999999999999999999999987776666555421110
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHP 683 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hp 683 (689)
..+|.. ...+..+++||.+||..++.+ |+++.|+++||
T Consensus 266 ---------------------------------~~~~~~-------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 266 ---------------------------------LTFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---------------------------------ccCCCc-------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111211 123466889999999854443 78999999999
Q ss_pred CCCC
Q 005590 684 WLQH 687 (689)
Q Consensus 684 wf~~ 687 (689)
||++
T Consensus 306 ~~~~ 309 (371)
T cd05622 306 FFKN 309 (371)
T ss_pred ccCC
Confidence 9975
No 118
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.3e-38 Score=339.01 Aligned_cols=251 Identities=25% Similarity=0.325 Sum_probs=195.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.+|+++++||+|+||.||++++..+++.||||++... ......+.+|+++++.++ |+||+++++++...+.+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN------HPNVVKCHDMFDHNGEI 147 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC------CCCcceeeeEeccCCeE
Confidence 5688889999999999999999999999999998653 233456778888888764 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++.+.. .....+..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 148 ~lv~e~~~~~~L~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kL~DfG~~~ 216 (353)
T PLN00034 148 QVLLEFMDGGSLEG---------THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS--AKNVKIADFGVSR 216 (353)
T ss_pred EEEEecCCCCcccc---------cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEcccccce
Confidence 99999998653221 112567778899999999999999999999999999999984 7889999999987
Q ss_pred cccCC---ccccccCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
..... .....||..|+|||++.. ...+.++|||||||++|+|++|+.||......+....+....
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~------- 289 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC------- 289 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-------
Confidence 65432 234578999999998743 234568999999999999999999997432211111110000
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
.......+ ...+.++++||.+||+.||++|||+.|+|+||||.+.
T Consensus 290 ------------------------~~~~~~~~---------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 290 ------------------------MSQPPEAP---------ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ------------------------ccCCCCCC---------CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 00000001 1234678999999999999999999999999999864
No 119
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-37 Score=324.61 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=194.0
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||+|+||+||++++..+++.||+|++..... ....+..|+++++.++ |++|+++++++....+.++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH------SRFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC------CCcEeeeeEEEcCCCeEEEEEeC
Confidence 6999999999999999999999999875421 2244567888887774 67999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|...+.... .....+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~~g~L~~~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 75 MNGGDLRYHIYNVD--EENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCHHHHHHhcc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCC
Confidence 986 5555443221 12234899999999999999999999999999999999999984 788999999998654332
Q ss_pred ---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 005590 544 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 620 (689)
Q Consensus 544 ---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~ 620 (689)
.....+|+.|+|||++.+..++.++|+|||||++|+|++|+.||...........+...+.
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~---------------- 214 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL---------------- 214 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc----------------
Confidence 2235789999999999999999999999999999999999999975432211111110000
Q ss_pred hhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 621 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
.....+| ...+..+.+||.+||+.||++|| |++++++||||+.
T Consensus 215 ---------------~~~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 215 ---------------NDSVTYP---------DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred ---------------ccCCCCc---------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 0000011 11345688999999999999999 8999999999975
No 120
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=343.59 Aligned_cols=248 Identities=30% Similarity=0.460 Sum_probs=208.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..|+.++.||+|.||.||+|.+..+++.||+|++..+ ......+.+|+.+|..++. +||.++|+.|..+..+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~------~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS------PNITEYYGSYLKGTKL 86 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc------chHHhhhhheeecccH
Confidence 4588889999999999999999999999999999865 3445677888999888864 6899999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+++||||.| ++.++++.... +.+..+..++++++.||.|||..+.+|||||+.|||+.. .|.+||+|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhcceecccccccceeEec--cCcEEEEeccee
Confidence 999999995 67777664432 477888899999999999999999999999999999995 589999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ..+++|||.|||||++.+..|+.++||||||++.+||++|.+||....+..+
T Consensus 159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------------------- 219 (467)
T KOG0201|consen 159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------------------- 219 (467)
T ss_pred eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-------------------
Confidence 776542 3568999999999999998999999999999999999999999975443211
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccc--hhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
-+.||... .+.. ..++.|++||..||+.||+.||+|.+||+|+|++.
T Consensus 220 -----------------------lflIpk~~PP~L~~---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 220 -----------------------LFLIPKSAPPRLDG---DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -----------------------EEeccCCCCCcccc---ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 12222211 1111 33566999999999999999999999999999875
No 121
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.1e-37 Score=330.99 Aligned_cols=280 Identities=33% Similarity=0.583 Sum_probs=217.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~- 455 (689)
+.++|++.+.||+|+||.||+|++..+|+.||+|++... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~ 76 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK------HENIIGILDIIRPPS 76 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC------CCCcCchhheeeccc
Confidence 457899999999999999999999999999999998642 223455677888888775 67999999887644
Q ss_pred ----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 456 ----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 456 ----~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
.+.++||||+.+++...+... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl 147 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKI 147 (336)
T ss_pred ccccceEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEE
Confidence 368999999998887665421 2889999999999999999999999999999999999984 788999
Q ss_pred EecCCcccccCC------ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 532 IDLGSSCFQTDN------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 532 ~DFGls~~~~~~------~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
+|||++...... .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+...++
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 999998654322 122467889999998765 4689999999999999999999999998888888888888888
Q ss_pred CCcHHHHhhhhhhh--hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 605 PIDLEMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 605 ~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.++.+.+....... .++. ... ..............+.++.+||++||+.+|++|||+.|+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIK-------------SLP--FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCHHHHHHhhchhhhhHHh-------------hcC--cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 76665543221110 0000 000 000000111112235668999999999999999999999999
Q ss_pred CCCCCC
Q 005590 683 PWLQHP 688 (689)
Q Consensus 683 pwf~~~ 688 (689)
|||..-
T Consensus 293 p~~~~~ 298 (336)
T cd07849 293 PYLEQY 298 (336)
T ss_pred cccccc
Confidence 999753
No 122
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.8e-37 Score=323.05 Aligned_cols=280 Identities=29% Similarity=0.427 Sum_probs=220.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC--
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-- 455 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~-- 455 (689)
++|++.+.||.|+||.||+|++..+++.+|+|.++... .......+|+.+++.++ ||||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ------HPNIVTVKEVVVGSNL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC------CCCEEEEEEEEEecCC
Confidence 57999999999999999999999999999999987542 22234567888887774 78999999999877
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 456 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 456 ~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
...++||||+.++|.+++..... .+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 79 ~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g 151 (293)
T cd07843 79 DKIYMVMEYVEHDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFG 151 (293)
T ss_pred CcEEEEehhcCcCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecC
Confidence 89999999999888887764332 3899999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 536 SSCFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 536 ls~~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
++...... .....+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||......+.+.++....+.+....|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred ceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 98765443 2234568889999998764 4689999999999999999999999998888888888888887777766
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+.......... .....+...++.. ..+..+.+||++||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 232 PGFSELPGAKKKTFTK----YPYNQLRKKFPAL--------SLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHhhccchhccccccc----ccchhhhcccccc--------CCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 5544332211100000 0000111111110 035668899999999999999999999999998
No 123
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-36 Score=318.10 Aligned_cols=276 Identities=30% Similarity=0.498 Sum_probs=217.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
+|++.+.||.|++|+||+|++..+|+.||||+++... .......+|+.+++.++ |+||+++++++...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK------HENIVRLHDVIHTENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc------CCCEeeeeeeEeeCCcEE
Confidence 5899999999999999999999999999999987642 22356667888888774 679999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+||||+.+++.+++..... ...+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++..
T Consensus 75 lv~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~ 149 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARA 149 (284)
T ss_pred EEEecCCccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhh
Confidence 9999999988887754331 234899999999999999999999999999999999999984 78899999999865
Q ss_pred ccCC---ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 540 QTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 540 ~~~~---~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
.... .....++..|+|||++.+. .++.++|+|||||++|+|++|+.||.+.+..+...++......+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 4332 1224568889999998764 57899999999999999999999999888888887777666665555544332
Q ss_pred hhhhhhhccccchhhhhccccccccCCcc--chhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+. ..+|.. ..........+..++++|.+||+.||.+||++.++++||||
T Consensus 230 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEYK-----------------PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchhc-----------------ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111111 001110 00011111234668899999999999999999999999998
No 124
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.1e-37 Score=330.52 Aligned_cols=280 Identities=30% Similarity=0.444 Sum_probs=220.4
Q ss_pred eecCcEEEE-EEeccCCCCceEEEEECCCCcEEEEEEeecchhhh---------------HhHHHHHHHHHHhcccCCCC
Q 005590 378 VIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---------------DQSLDEIKLLKLVNKNDPAD 441 (689)
Q Consensus 378 ~l~~rY~i~-~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~---------------~~~~~Ei~iL~~l~~~~~~~ 441 (689)
.+.+||.++ +.||.|+||+||+|++..+++.||||++....... ..+.+|+.+++.++
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------ 78 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK------ 78 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC------
Confidence 456788754 67999999999999999999999999986532211 13567888877774
Q ss_pred CCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 005590 442 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 521 (689)
Q Consensus 442 h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl 521 (689)
|+||+++++++...+..++||||+.++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||++
T Consensus 79 h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill 152 (335)
T PTZ00024 79 HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI 152 (335)
T ss_pred CcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE
Confidence 689999999999999999999999998888775322 28899999999999999999999999999999999999
Q ss_pred eccCCCeEEEEecCCcccccC-----------------CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhC
Q 005590 522 KSYQRCEIKIIDLGSSCFQTD-----------------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTG 583 (689)
Q Consensus 522 ~~~~~~~vkL~DFGls~~~~~-----------------~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG 583 (689)
+. ++.++|+|||.+..... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|
T Consensus 153 ~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 153 NS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred CC--CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 84 77899999998865441 11123457789999998764 478999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHH
Q 005590 584 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 663 (689)
Q Consensus 584 ~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~ 663 (689)
.+||.+.+..+.+..+...++.++...|........+.. ..... ...........+..+.+||.
T Consensus 231 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~li~ 294 (335)
T PTZ00024 231 KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE--------------FTPRK--PKDLKTIFPNASDDAIDLLQ 294 (335)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc--------------cCcCC--cccHHHhCcCCChHHHHHHH
Confidence 999999988888888888888777666554432211100 00000 11111222334567899999
Q ss_pred HhcccCCCCCcCHHHHHcCCCCCC
Q 005590 664 TLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 664 ~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+||+.+|++|||++|+|.||||+.
T Consensus 295 ~~l~~~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 295 SLLKLNPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHcCCCchhccCHHHHhcCcccCC
Confidence 999999999999999999999985
No 125
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8.7e-38 Score=333.71 Aligned_cols=243 Identities=28% Similarity=0.411 Sum_probs=197.9
Q ss_pred EEeccCCCCceEEEEE---CCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 387 EYLGSAAFSKVFQAQD---LHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d---~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
+.||+|+||.||++++ ..+|+.||+|++..... .......|+++++.+ .|+||+++++++...+..|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV------NHPFIVKLHYAFQTEGKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC------CCCCcccEEEEEEcCCEEEE
Confidence 5799999999999986 35789999999986431 223455677777766 47899999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+. ++|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~ 147 (318)
T cd05582 76 ILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKE 147 (318)
T ss_pred EEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcc
Confidence 999997 4676665432 23889999999999999999999999999999999999984 78899999999876
Q ss_pred ccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 540 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 540 ~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
.... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+....
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~------------- 214 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK------------- 214 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 4332 233578999999999999889999999999999999999999998876666555443111
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
..+|. ..+..+.+||++||+.||++||| +.++++||||+.
T Consensus 215 ----------------------~~~p~---------~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 215 ----------------------LGMPQ---------FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred ----------------------CCCCC---------CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 01111 13456889999999999999999 788999999975
No 126
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-37 Score=350.70 Aligned_cols=292 Identities=22% Similarity=0.272 Sum_probs=206.2
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCC-CcEEEE------------------EEeecchhhhHhHHHHHHHHHHhc
Q 005590 375 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCL------------------KIIKNDKDFFDQSLDEIKLLKLVN 435 (689)
Q Consensus 375 ~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~t-g~~vAv------------------Kii~~~~~~~~~~~~Ei~iL~~l~ 435 (689)
.+..+.++|++++.||+|+||+||++..+.. +...++ |.+.........+.+|+.+++.++
T Consensus 142 ~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~ 221 (501)
T PHA03210 142 HDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN 221 (501)
T ss_pred cchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC
Confidence 3445668999999999999999999875332 222222 222222233456678888888774
Q ss_pred ccCCCCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 005590 436 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 515 (689)
Q Consensus 436 ~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLK 515 (689)
|+||+++++++...+..++|++++.+++.+++....... ........++.|+.||+.||.|||++||+|||||
T Consensus 222 ------HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK 294 (501)
T PHA03210 222 ------HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK 294 (501)
T ss_pred ------CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 789999999999999999999999988888765332211 1224467788999999999999999999999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccCC----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCC-CCC-
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVL-FPN- 589 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~P-F~~- 589 (689)
|+|||++. ++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..+ |..
T Consensus 295 P~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 295 LENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred HHHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 99999984 788999999999765432 2235789999999999999999999999999999999998754 432
Q ss_pred -ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhccc
Q 005590 590 -DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 668 (689)
Q Consensus 590 -~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~ 668 (689)
......+.+++..++....+.........+++.... . ......++ .+... ...+..+.++|.+||++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~-~-------~~~~~~~~---~~~~~-~~~~~~~~~li~kmL~~ 440 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAE-I-------DHAGHSVP---PLIRN-LGLPADFEYPLVKMLTF 440 (501)
T ss_pred CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhh-c-------ccCccchh---hHHHh-cCCChHHHHHHHHHhcc
Confidence 234455555555554433322111112222221100 0 00000011 11111 12346688999999999
Q ss_pred CCCCCcCHHHHHcCCCCCC
Q 005590 669 NPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 669 dP~kRpTa~ElL~hpwf~~ 687 (689)
||.+|||+.|+|+||||+.
T Consensus 441 DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 441 DWHLRPGAAELLALPLFSA 459 (501)
T ss_pred CcccCcCHHHHhhChhhhc
Confidence 9999999999999999975
No 127
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-36 Score=320.40 Aligned_cols=249 Identities=28% Similarity=0.478 Sum_probs=208.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+++++.+. |+||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR------HPFLVNLYGSFQDDS 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCccceeeEEEcCC
Confidence 47999999999999999999999999999999987532 23455667788777664 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+. ++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+|+. ++.+||+|||
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg 146 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFG 146 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCC
Confidence 9999999995 67877765432 2889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 536 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 536 ls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
++...........+++.|+|||.+.+..++.++|+||||+++|+|++|..||...........+...
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------- 213 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------------- 213 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------
Confidence 9887665555567899999999999888999999999999999999999999877654444443211
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
...+|. ..+..++++|++||+.||.+|+ +++|+++||||+.
T Consensus 214 ----------------------~~~~~~---------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 214 ----------------------KVRFPS---------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred ----------------------CccCCc---------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 001111 1245688999999999999999 9999999999974
No 128
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.1e-37 Score=329.49 Aligned_cols=245 Identities=22% Similarity=0.346 Sum_probs=194.3
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||++++..+++.||+|+++... .....+.+|+.++..+. .|++|+++++++...+++++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-----SNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-----CCCCEeeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999998642 22345667777777664 3789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc-
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 540 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~- 540 (689)
||+.+ +|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceecc
Confidence 99985 5655554322 2899999999999999999999999999999999999985 788999999998642
Q ss_pred --cCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH------HHHHHHHHhhcCCCcHHHHh
Q 005590 541 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV------VMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 541 --~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~------~~~l~~i~~~~g~~~~e~~~ 612 (689)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+.+..++
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~------------ 215 (327)
T cd05617 148 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI------------ 215 (327)
T ss_pred CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH------------
Confidence 2223446799999999999999999999999999999999999999953211 11111110
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC------HHHHHcCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPWLQ 686 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT------a~ElL~hpwf~ 686 (689)
......+|. ..+..+.++|.+||+.||++|++ ..++++||||+
T Consensus 216 ----------------------~~~~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~ 264 (327)
T cd05617 216 ----------------------LEKPIRIPR---------FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264 (327)
T ss_pred ----------------------HhCCCCCCC---------CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence 000111221 23456789999999999999998 57999999997
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
.
T Consensus 265 ~ 265 (327)
T cd05617 265 S 265 (327)
T ss_pred C
Confidence 5
No 129
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.8e-37 Score=347.26 Aligned_cols=255 Identities=24% Similarity=0.328 Sum_probs=204.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
..++|++.+.||+|+||+||+|++..+|+.||||++.... .......+|+.++..+ .|++|++++..+...
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~------~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC------DFFSIVKCHEDFAKK 103 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC------CCCcEEEeecceecc
Confidence 3579999999999999999999999999999999987542 2334455666666544 478999998877643
Q ss_pred C--------eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC
Q 005590 456 E--------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 526 (689)
Q Consensus 456 ~--------~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~ 526 (689)
. .+++||||+. |+|.+++..... ....+++..+..++.||+.||.|||+.||+||||||+|||++. +
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~ 179 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--N 179 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--C
Confidence 2 4789999998 578777654332 2234899999999999999999999999999999999999985 7
Q ss_pred CeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 005590 527 CEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 527 ~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~ 601 (689)
+.+||+|||+++..... ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 88999999998764322 2346789999999999999999999999999999999999999988776655544421
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.. ...+| ...++.+.+||.+||+.||.+||++.++|+
T Consensus 260 ~~----------------------------------~~~~~---------~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 260 GR----------------------------------YDPLP---------PSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CC----------------------------------CCCCC---------CCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 00 00011 123466889999999999999999999999
Q ss_pred CCCCC
Q 005590 682 HPWLQ 686 (689)
Q Consensus 682 hpwf~ 686 (689)
|||++
T Consensus 297 ~p~~~ 301 (496)
T PTZ00283 297 MPICK 301 (496)
T ss_pred CHHHH
Confidence 99975
No 130
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-37 Score=329.67 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=200.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.++||+|+||.||++++..+++.+|+|++.+.. .....+..|+.++..+ .|++|+++++++....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG------DNQWITTLHYAFQDEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC------CCCCEeeEEEEEecCC
Confidence 47999999999999999999999999999999986532 1122344555555544 5789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++++||||+. |+|.+++..... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~--~~~~kL~DfG 147 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFG 147 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEeecc
Confidence 9999999997 577777754221 2888999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC----ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 536 SSCFQTDN----LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 536 ls~~~~~~----~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
++...... ....+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+..+.+..+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-- 225 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--
Confidence 98653221 12357899999999986 34588999999999999999999999988776666655531100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hpw 684 (689)
...+|.. ....+..+++||++||..++.+ |+++.|+++|||
T Consensus 226 -------------------------------~~~~p~~------~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 226 -------------------------------RFQFPAQ------VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred -------------------------------cccCCCc------cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 0111111 1123567899999999765555 789999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|++
T Consensus 269 f~~ 271 (332)
T cd05623 269 FTG 271 (332)
T ss_pred cCC
Confidence 985
No 131
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-36 Score=318.44 Aligned_cols=279 Identities=30% Similarity=0.493 Sum_probs=218.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+++++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR------HENIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC------CCCeeehhheEEECCE
Confidence 4799999999999999999999999999999998653 233467778888888875 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+.++++..+.... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~ 147 (288)
T cd07833 75 LYLVFEYVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFA 147 (288)
T ss_pred EEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecc
Confidence 99999999988776554322 12789999999999999999999999999999999999984 888999999998
Q ss_pred ccccCC----ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
...... .....++..|+|||++.+. .++.++|+||||+++|+|++|++||.+....+.+..+...++..+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 765432 2235678899999999888 78999999999999999999999999887777777777777776665443
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhh-ccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHH-LQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.......+.. .... ........... ....+..+++||++||..+|++|||++++++||||
T Consensus 228 ~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 228 LFSSNPRFAG------------VAFP-EPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred hcccCccccc------------cccC-CCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 2211100000 0000 00000111111 11235778999999999999999999999999998
No 132
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-37 Score=334.13 Aligned_cols=245 Identities=25% Similarity=0.377 Sum_probs=193.5
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||+|+||+||+|++..+++.||+|++..... .......|..++..+. ...||+|+++++++....+.++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL---LDESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc---cCCCCcCcceEEEEecCCeEEEEEcC
Confidence 7999999999999999999999999875321 1223334555554443 12589999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC-
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 542 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~- 542 (689)
+.+ +|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~g~L~~~l~~~------~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 78 MSGGELFWHLQKE------GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTD 149 (330)
T ss_pred CCCChHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCC
Confidence 985 666655432 22889999999999999999999999999999999999984 78899999999865322
Q ss_pred --CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 005590 543 --NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 619 (689)
Q Consensus 543 --~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~ 619 (689)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~----------------- 212 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG----------------- 212 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 23346789999999999765 4889999999999999999999999887665555444210
Q ss_pred hhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc----CHHHHHcCCCCCC
Q 005590 620 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP----TAREALDHPWLQH 687 (689)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp----Ta~ElL~hpwf~~ 687 (689)
...+|. ...+..+.+||++||+.||.+|| ++.++++||||..
T Consensus 213 ------------------~~~~~~--------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 213 ------------------KVRFPK--------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred ------------------CCCCCC--------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 011111 11345678999999999999998 7999999999975
No 133
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2e-37 Score=332.13 Aligned_cols=244 Identities=27% Similarity=0.395 Sum_probs=193.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||+|+||+||+|++..+|+.+|+|++..... ....+..|..++.. ...||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~-----~~~hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLK-----NVKHPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHH-----hCCCCCCccEEEEEecCCEEEEEE
Confidence 368999999999999999999999999975421 12233333332211 235899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~~ 147 (325)
T cd05604 76 DFVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEGI 147 (325)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccCC
Confidence 99986 555554322 23889999999999999999999999999999999999984 7889999999986532
Q ss_pred ---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 542 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 542 ---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+...
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~---------------- 211 (325)
T cd05604 148 AQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK---------------- 211 (325)
T ss_pred CCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC----------------
Confidence 2233467899999999999999999999999999999999999999887666555444310
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH----HHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa----~ElL~hpwf~~ 687 (689)
...++. ..+..+.++|++||+.||.+||++ .++++||||+.
T Consensus 212 -------------------~~~~~~---------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 212 -------------------PLVLRP---------GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred -------------------CccCCC---------CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 000010 123567899999999999999987 59999999975
No 134
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.8e-37 Score=329.62 Aligned_cols=255 Identities=20% Similarity=0.295 Sum_probs=200.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||+||++++..+++.||+|++.+.. .....+.+|..++..+ .|++|+++++++...+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~l~~~~~~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG------DCQWITTLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence 47999999999999999999999999999999987532 1223344556665544 5789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG 147 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFG 147 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEecc
Confidence 99999999974 6777765422 12889999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCc----cccccCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 536 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 536 ls~~~~~~~----~~~~gt~~Y~APE~l~~-----~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
++....... ....||+.|+|||++.+ ..++.++|+|||||++|+|++|+.||...+..+.+..+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE-- 225 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC--
Confidence 987654321 23568999999999875 4678899999999999999999999988766665555431100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC--CcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k--RpTa~ElL~hpw 684 (689)
...+|.. ....+..+++||.+||..++++ |++++++++|||
T Consensus 226 -------------------------------~~~~p~~------~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 226 -------------------------------RFQFPSH------ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred -------------------------------cccCCCc------cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 0111111 1123467889999999976655 579999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|+.
T Consensus 269 f~~ 271 (331)
T cd05624 269 FEG 271 (331)
T ss_pred cCC
Confidence 975
No 135
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.7e-37 Score=328.42 Aligned_cols=280 Identities=31% Similarity=0.527 Sum_probs=218.4
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+..+|++.+.||+|+||+||++++..+++.||||.+... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ni~~~~~~~~~~ 76 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD------HENVIAIKDIMPPP 76 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC------CCCccchHHheecc
Confidence 457899999999999999999999999999999998642 222345667888887764 67999999988644
Q ss_pred -----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 456 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 456 -----~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
.+.++||||+.++|.+++.... .+++..+..++.||+.||.|||+.+++||||||+||+++. ++.+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~k 148 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLK 148 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEE
Confidence 3589999999988887765322 2899999999999999999999999999999999999985 77899
Q ss_pred EEecCCcccccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 531 IIDLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 531 L~DFGls~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|+|||++...... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+....+..+...++++
T Consensus 149 L~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (337)
T cd07858 149 ICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228 (337)
T ss_pred ECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998765432 223467889999999875 468999999999999999999999999988888888888888877
Q ss_pred cHHHHhhhh--hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 607 DLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
+.+.+.... ...++.. ... ..............+..+++||++||+.+|++|||+.++|+|||
T Consensus 229 ~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 229 SEEDLGFIRNEKARRYIR-------------SLP--YTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred ChHHhhhcCchhhhHHHH-------------hcC--cccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 766542111 0111110 000 00000111112234567899999999999999999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|..
T Consensus 294 ~~~ 296 (337)
T cd07858 294 LAS 296 (337)
T ss_pred hhh
Confidence 975
No 136
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=9.7e-37 Score=320.61 Aligned_cols=254 Identities=26% Similarity=0.343 Sum_probs=199.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.|++.+.||+|+||.||++.+..+++.||+|.+.... ........|+.+++.++ |++|+++++.+...++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC------CCCeeeeeEEEecCCE
Confidence 3788899999999999999999999999999986532 12234567888887774 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGL 148 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccc
Confidence 9999999985 66666543221 23889999999999999999999999999999999999984 77899999999
Q ss_pred cccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 537 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 537 s~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
+...... .....|++.|+|||++.+..++.++|+||+||++|+|++|..||...............
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~------------ 216 (285)
T cd05630 149 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL------------ 216 (285)
T ss_pred eeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh------------
Confidence 8764332 22357899999999999999999999999999999999999999764221111110000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
.. ......+ ...++.+++||++||+.||++||| ++|+++||||..
T Consensus 217 ------~~-------------~~~~~~~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 217 ------VK-------------EVQEEYS---------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred ------hh-------------hhhhhcC---------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 00 0000011 123456889999999999999999 999999999975
No 137
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=343.09 Aligned_cols=253 Identities=25% Similarity=0.291 Sum_probs=205.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC-CcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~t-g~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..|.+.+.||+|++|.||+|.+..+ ++.||+|.+..+. .....+.+|+.+++.+ +||||+++++++...+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l------~Hpniv~~~~~~~~~~~~ 140 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC------DHFGIVKHFDDFKSDDKL 140 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC------CCCCEeEEEEEEEECCEE
Confidence 4599999999999999999998777 7889999775433 2334556688777766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+|||||+.+ +|.+.+.... .....+++..+..++.||+.||.|||+.||+||||||+||||+. ++.+||+|||++
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgla 216 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRL--KEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGFS 216 (478)
T ss_pred EEEEECCCCCCHHHHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcCc
Confidence 999999974 6776654322 12234889999999999999999999999999999999999985 788999999999
Q ss_pred ccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
...... ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-------- 288 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-------- 288 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------
Confidence 765432 2345789999999999999999999999999999999999999988766665554431000
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
..+| ...+..+.+||.+||..||++||++.++|.|||++
T Consensus 289 --------------------------~~~~---------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 289 --------------------------DPFP---------CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred --------------------------CCCC---------ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 0011 11235688999999999999999999999999985
No 138
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.9e-37 Score=320.11 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=198.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.++||+|+||.||+|++..+++.||+|++..+. .....+.+|+.+++.+ +||||+++++.+...+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~ 74 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC------DSPYIIGFYGAFFVENRI 74 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC------CCCCeeeEEEEEEECCEE
Confidence 36889999999999999999999999999999987542 2334566788777766 478999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++||||+.++.++... .+++..+..++.||+.||.|||+.||+|+||||+|||++. ++.++|+|||++.
T Consensus 75 ~lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~ 143 (279)
T cd06619 75 SICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVST 143 (279)
T ss_pred EEEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCcce
Confidence 9999999976554321 1678889999999999999999999999999999999985 7889999999987
Q ss_pred cccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 539 FQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 539 ~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
..... .....++..|+|||++.+..++.++|+|||||++|+|++|..||.......... .+...
T Consensus 144 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~--------~~~~~------- 208 (279)
T cd06619 144 QLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL--------MPLQL------- 208 (279)
T ss_pred ecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc--------chHHH-------
Confidence 65432 334578999999999999899999999999999999999999996522111000 00000
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
....... .....+ ....++.+++||.+||+.||.+||+++|+++||||+.
T Consensus 209 ~~~~~~~------------~~~~~~--------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 209 LQCIVDE------------DPPVLP--------VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred HHHHhcc------------CCCCCC--------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 0000000 000000 0113466899999999999999999999999999975
No 139
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7e-37 Score=330.31 Aligned_cols=245 Identities=29% Similarity=0.415 Sum_probs=198.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcE-EEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~-vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
....+.+.||+|+||+||++.+ .|.. ||+|++.... .....+.+|+.+|..++ |||||++++++....
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~------HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR------HPNIVQFYGACTSPP 112 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCC
Confidence 4455666699999999999986 4555 9999997632 22558889999999875 789999999999887
Q ss_pred -eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCcEEEeccCCC-eEEEE
Q 005590 457 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLKPENILIKSYQRC-EIKII 532 (689)
Q Consensus 457 -~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g-IvHrDLKp~NILl~~~~~~-~vkL~ 532 (689)
.++|||||+.+ +|..++... ....++...+..|+.||++||.|||+++ ||||||||+||||+. +. ++||+
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~--~~~~~KI~ 186 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL--KGKTLKIA 186 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC--CCCEEEEC
Confidence 79999999995 666666543 2233999999999999999999999999 999999999999995 65 99999
Q ss_pred ecCCcccccC---CccccccCccccChhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 533 DLGSSCFQTD---NLCLYVQSRSYRAPEVII--GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 533 DFGls~~~~~---~~~~~~gt~~Y~APE~l~--~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|||+++.... ..+...||+.|||||++. ...|+.++||||+|+++|||+||+.||.+.........+...
T Consensus 187 DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~----- 261 (362)
T KOG0192|consen 187 DFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG----- 261 (362)
T ss_pred CCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-----
Confidence 9999987654 333368999999999999 568999999999999999999999999987775555444311
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..+..+|.. .++.+..||..||..||.+||+..+++.
T Consensus 262 ----------------------------~~Rp~~p~~---------~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 262 ----------------------------GLRPPIPKE---------CPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ----------------------------CCCCCCCcc---------CCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 112222221 3456889999999999999999999874
No 140
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.1e-37 Score=328.98 Aligned_cols=243 Identities=24% Similarity=0.374 Sum_probs=192.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchhh----hHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF----FDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~----~~~~~~Ei~i-L~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
+.||+|+||+||+|++..+++.||+|++...... ......|... ++ ...|+||+++++++...+..++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~------~~~h~~Iv~~~~~~~~~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLK------NVKHPFLVGLHFSFQTADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHH------hCCCCCCCceeEEEEcCCeEEEE
Confidence 3689999999999999999999999999754211 1122223222 22 24688999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~ 146 (325)
T cd05602 75 LDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKEN 146 (325)
T ss_pred EeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCccc
Confidence 999986 5666554322 2788899999999999999999999999999999999984 788999999998653
Q ss_pred c---CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~---~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------------- 212 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-------------- 212 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------------
Confidence 2 22334679999999999999999999999999999999999999998877666555443100
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH----HHHcCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR----EALDHPWLQH 687 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~----ElL~hpwf~~ 687 (689)
..++ ...+..+.+||.+||+.||.+|+++. ++++|+||..
T Consensus 213 ---------------------~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 213 ---------------------LQLK---------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred ---------------------cCCC---------CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 0000 11245688999999999999999876 8999999964
No 141
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.4e-36 Score=326.44 Aligned_cols=279 Identities=31% Similarity=0.552 Sum_probs=219.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++.+.||+|+||.||++.+..+++.||||++... ......+.+|+.+++.++ |+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK------HENVIGLLDVFTPD 86 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC------CCCccceeeeecCC
Confidence 468899999999999999999999999999999998643 222345667888888774 67999999998755
Q ss_pred C------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ~------~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
. ..++||||+++++.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCEL 157 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCE
Confidence 3 4689999997777766542 12889999999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 530 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
+|+|||++...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||........+..++...+..+.
T Consensus 158 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 158 KILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred EEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999999876655555677899999999876 45889999999999999999999999988877778888777776665
Q ss_pred HHHhhhhhhh--hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
+++....... .+.. .+... ....+.......+..+.++|.+||+.||++|||+.++++||||+
T Consensus 238 ~~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~ 302 (343)
T cd07880 238 EFVQKLQSEDAKNYVK-------------KLPRF--RKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302 (343)
T ss_pred HHHHhhcchhHHHHHH-------------hcccc--CcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence 5443322110 0000 00000 00111122233456789999999999999999999999999997
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
.
T Consensus 303 ~ 303 (343)
T cd07880 303 E 303 (343)
T ss_pred h
Confidence 5
No 142
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1e-36 Score=329.19 Aligned_cols=280 Identities=34% Similarity=0.597 Sum_probs=222.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++.+.||+|++|.||+|++..+++.||+|++... ........+|+.+++.+. |+||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD------HENVIGLLDVFTPA 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc------CCCHHHHHHHhhcc
Confidence 467899999999999999999999999999999998643 223345667888887764 67999999888765
Q ss_pred Ce------EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 EH------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ~~------l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
.. .++|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCEL 157 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCE
Confidence 54 899999998888887753 12899999999999999999999999999999999999985 7889
Q ss_pred EEEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 530 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
+|+|||++...........++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+......+..+....+.++.
T Consensus 158 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred EEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 99999999876655555678899999999875 36789999999999999999999999988888888888888877776
Q ss_pred HHHhhhhhh--hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
.++.+.... ..+.. .+ ...............+..+.+||++||+.||++|||+.||++||||+
T Consensus 238 ~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~ 302 (343)
T cd07851 238 ELLQKISSESARNYIQ-------------SL--PQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302 (343)
T ss_pred HHHhhccchhHHHHHH-------------hc--cccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence 655433211 00000 00 00000111111122356799999999999999999999999999998
Q ss_pred CC
Q 005590 687 HP 688 (689)
Q Consensus 687 ~~ 688 (689)
+.
T Consensus 303 ~~ 304 (343)
T cd07851 303 EY 304 (343)
T ss_pred cc
Confidence 63
No 143
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2e-36 Score=316.22 Aligned_cols=276 Identities=29% Similarity=0.458 Sum_probs=217.5
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
|++.+.||.|++|.||+|.++.+|..||+|++..+. .....+.+|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN------HPNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC------CCCccCHhheeccCCeEE
Confidence 678899999999999999999999999999987543 22345677888888775 679999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+||||++++|.+++..... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 iv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~ 148 (283)
T cd07835 75 LVFEFLDLDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARA 148 (283)
T ss_pred EEEeccCcCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccc
Confidence 9999998888887754331 23889999999999999999999999999999999999985 78899999999875
Q ss_pred ccCCc---cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 540 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 540 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... ....++..|+|||++.+. .++.++|+|||||++|+|++|++||...+....+.++....+.+....|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 43221 223457889999988764 57899999999999999999999999888777777777777777766655443
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+...- ... .. ..........+..+.+||.+||+.||.+|||+.|+++||||
T Consensus 229 ~~~~~~~~~----------~~~--~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKPTF----------PKW--AR---QDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hchhhhhhc----------ccc--cc---cchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 332221100 000 00 00111122345678999999999999999999999999998
No 144
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.8e-36 Score=327.18 Aligned_cols=279 Identities=31% Similarity=0.557 Sum_probs=216.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~- 455 (689)
.++|.+.+.||+|+||.||+|++..+|+.||+|++... ......+.+|+.+++.++ |+||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~ 87 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ------HENVIGLLDVFTSAV 87 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC------CCCccchhheecccc
Confidence 57899999999999999999999999999999998653 222345667888877764 67999999998754
Q ss_pred -----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 456 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 456 -----~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
...++||||+..++..... ..+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~k 157 (342)
T cd07879 88 SGDEFQDFYLVMPYMQTDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELK 157 (342)
T ss_pred cCCCCceEEEEecccccCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEE
Confidence 3569999999876654431 12888999999999999999999999999999999999985 78899
Q ss_pred EEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 531 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 531 L~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
|+|||++...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+....+.+..+
T Consensus 158 L~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 158 ILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred EeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9999998766544445577889999999876 458899999999999999999999999988888888888877776665
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.+.........- +.. .. ..++ ...+.......+..+++||++||+.||.+|||+.++|.||||+.
T Consensus 238 ~~~~~~~~~~~~-------~~~----~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 238 FVQKLEDKAAKS-------YIK----SL-PKYP-RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHHHhcccchHH-------HHh----hc-CCcc-cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 544332211000 000 00 0011 11111111224567889999999999999999999999999975
No 145
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=6.6e-37 Score=327.33 Aligned_cols=243 Identities=27% Similarity=0.396 Sum_probs=191.9
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHH-HHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~-iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
+.||+|+||+||+|++..+++.||+|++..... ....+..|.. +++. ..|+||+++++++...+..++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~iv~~~~~~~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN------LKHPFLVGLHYSFQTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh------CCCCCccceeeEEEcCCEEEEE
Confidence 368999999999999999999999999975421 1222333333 2332 3588999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+.+ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+||||+. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 75 LDYVNGGELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (321)
T ss_pred EcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccC
Confidence 999986 555444322 22888999999999999999999999999999999999984 788999999998653
Q ss_pred cC---CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~~---~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--------------- 211 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--------------- 211 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---------------
Confidence 22 223457899999999999989999999999999999999999999887665555444210
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH----HHHHcCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 687 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa----~ElL~hpwf~~ 687 (689)
...+|. ..+..+.++|.+||+.||.+|+++ .++++||||+.
T Consensus 212 --------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 212 --------------------PLQLPG---------GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred --------------------CCCCCC---------CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 001111 123557899999999999999976 59999999974
No 146
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.3e-36 Score=315.12 Aligned_cols=276 Identities=29% Similarity=0.484 Sum_probs=218.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC--Ce
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EH 457 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--~~ 457 (689)
|++.+.||.|++|.||+|++..+++.+|+|++.... .....+.+|+.+++.+. |+||+++++++... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR------HPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc------CCCeeeheeeEecCCCCc
Confidence 678999999999999999999999999999998652 23345677888888775 67999999999988 89
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+.+++.+++.... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~ 147 (287)
T cd07840 75 IYMVFEYMDHDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLA 147 (287)
T ss_pred EEEEeccccccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccce
Confidence 99999999988877765432 23889999999999999999999999999999999999995 788999999998
Q ss_pred ccccCCc----cccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDNL----CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~~----~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+....+..+....+.++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 148 RPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 7654432 23456788999998765 457899999999999999999999999988888888888877777666654
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccC-CcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF-SDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~-~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
........- ......+....+...... .+..+.++|++||+.+|++|||+.++++||||
T Consensus 228 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 228 GVSKLPWFE--------------NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccchhhh--------------hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 433221000 000001111111122222 25678999999999999999999999999997
No 147
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=316.06 Aligned_cols=260 Identities=29% Similarity=0.431 Sum_probs=206.6
Q ss_pred ecCcEEEEE-EeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe---
Q 005590 379 IAGRYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--- 454 (689)
Q Consensus 379 l~~rY~i~~-~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~--- 454 (689)
+.++|+|.. +||-|-.|+|..+.++.||+++|+|++... ....+|+++..... .|+|||.++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS-----GHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc-----CCCceEEeehhhhhhcc
Confidence 456777764 699999999999999999999999998654 35567777766654 58999999999874
Q ss_pred -CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-cCCCeEEE
Q 005590 455 -LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKI 531 (689)
Q Consensus 455 -~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~-~~~~~vkL 531 (689)
...+.+|||.|+| .|+..+... +...|++.++..|++||..|+.|||+.+|.||||||+|+|.+. ..+..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~----g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDR----GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHc----ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe
Confidence 3679999999996 576666543 3345999999999999999999999999999999999999964 34678999
Q ss_pred EecCCccccc--CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 532 IDLGSSCFQT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 532 ~DFGls~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+|||+|+... ....+.+-||.|.|||++...+|+...|+||+||++|-||+|.+||....-.. ++..
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-----------ispg 274 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----------ISPG 274 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----------CChh
Confidence 9999998766 34556788999999999999999999999999999999999999996542211 1111
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
|- .......|.+|.... ...++..+|+|+++|..+|++|+|+.+++.|||+.+
T Consensus 275 Mk--------------------~rI~~gqy~FP~pEW-----s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 275 MK--------------------RRIRTGQYEFPEPEW-----SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred HH--------------------hHhhccCccCCChhH-----hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 10 011122344443211 123467899999999999999999999999999975
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.6e-36 Score=311.41 Aligned_cols=249 Identities=29% Similarity=0.387 Sum_probs=199.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~------~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+.|.+.+.||+|++|.||++.+..+++.+|+|.+..... ....+.+|+.+++.+ .|+||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL------QHERIVQYYGCLRD 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC------CCCCeeeeEEEEcc
Confidence 468999999999999999999999999999999875321 223556677777766 47899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
....++||||+.+ +|.+.+.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~d 147 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGD 147 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEee
Confidence 9999999999985 6766665332 2788999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCCc------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 534 LGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 534 FGls~~~~~~~------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
||++....... ....++..|+|||++.+..++.++|+||||+++|+|++|+.||...........+...
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----- 222 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ----- 222 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc-----
Confidence 99986543211 2345778999999999988999999999999999999999999765443332222100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+| ...+..+.+||++||..+|.+|||+.++|+||||
T Consensus 223 ----------------------------~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 223 ----------------------------PTNPQLP---------SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ----------------------------CCCCCCC---------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0001111 1234568899999999999999999999999997
No 149
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=335.74 Aligned_cols=251 Identities=27% Similarity=0.398 Sum_probs=216.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|.+++++|+|+||.+++++++..+..+++|.+.... ........|+.++.+++ ||||+.+++.|...+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~------hP~iv~y~ds~~~~~~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL------HPNIVEYKDSFEEDGQ 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc------CCCeeeeccchhcCCc
Confidence 67999999999999999999999999999999997643 23346678888888765 7899999999998888
Q ss_pred -EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 458 -LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 458 -l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++|||+|++| ++.+.+...+ ...++++.+..++.||+.||.|||+++|+|||||+.||++++ ++.|+|+|||
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk--~~~VkLgDfG 151 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK--DKKVKLGDFG 151 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc--cCceeecchh
Confidence 9999999996 5666665444 234999999999999999999999999999999999999996 6778999999
Q ss_pred CcccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 536 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 536 ls~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
+|+..+.. ..+.+||+.|++||++.+.+|..++|||||||++|||++-+++|.+.+...+..+|......
T Consensus 152 laK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~------- 224 (426)
T KOG0589|consen 152 LAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS------- 224 (426)
T ss_pred hhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-------
Confidence 99987654 34578999999999999999999999999999999999999999999999999888744421
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
.+|. ....+++.||..||+.+|+.||++.+||.+|.++
T Consensus 225 ---------------------------Plp~---------~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 225 ---------------------------PLPS---------MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ---------------------------CCCc---------cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 1111 1235688999999999999999999999998775
No 150
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=9.9e-37 Score=326.40 Aligned_cols=277 Identities=36% Similarity=0.529 Sum_probs=222.7
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC--
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 456 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~-- 456 (689)
||++.+.||.|++|.||+|++..+++.+|||++... ......+.+|+.+++.++ |+||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR------HENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC------CcchhhhhhhhcccCcc
Confidence 689999999999999999999889999999998753 233456778888888775 679999999988775
Q ss_pred ---eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 457 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 457 ---~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.+++||||+.++|.+++.... .+++..++.++.||+.||.|||+.||+|+||||+|||++. ++.++|+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~d 146 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICD 146 (330)
T ss_pred cccceEEEecchhhhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcc
Confidence 899999999988777765322 3899999999999999999999999999999999999995 68999999
Q ss_pred cCCcccccCC------ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 534 LGSSCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 534 FGls~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
||.+...... .....+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||.+.+..+.+..++...+.+
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 9998765443 2234678899999999887 79999999999999999999999999999999999999888887
Q ss_pred cHHHHhhhh--hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 607 DLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
+.+.+.... ....+... . .......+.......+..+.+||.+||+++|.+|||+.++++|||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 227 SEEDLKFITSEKARNYLKS-------------L--PKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred ChhHhhhccccchhhHHhh-------------c--ccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 776654211 11111110 0 000011111122234567899999999999999999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
|++
T Consensus 292 ~~~ 294 (330)
T cd07834 292 LAQ 294 (330)
T ss_pred HHh
Confidence 975
No 151
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2e-36 Score=314.12 Aligned_cols=253 Identities=26% Similarity=0.419 Sum_probs=199.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC----
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~---- 455 (689)
.++|++.+.||+|+||.||+|++..+++.+|+|++.........+..|+.+++.+. .|+||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence 46799999999999999999999999999999999876555567778888888774 378999999998753
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 456 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 456 --~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
...++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~ 153 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLV 153 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEc
Confidence 468999999985 6777665422 123889999999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccCC---ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....+++.|+|||++. +..++.++|+||+||++|+|++|..||...........+..
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~--- 230 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR--- 230 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---
Confidence 99998754322 23356889999999986 34588899999999999999999999965433222111100
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.......+ ...+..+.+||.+||..||.+|||+.++++|||
T Consensus 231 ------------------------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 231 ------------------------------NPAPRLKS---------KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred ------------------------------CCCCCCCC---------CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 00000000 012356889999999999999999999999999
Q ss_pred C
Q 005590 685 L 685 (689)
Q Consensus 685 f 685 (689)
|
T Consensus 272 ~ 272 (272)
T cd06637 272 I 272 (272)
T ss_pred C
Confidence 7
No 152
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.8e-36 Score=324.79 Aligned_cols=288 Identities=22% Similarity=0.280 Sum_probs=197.9
Q ss_pred EEEEeccC--CCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 385 VTEYLGSA--AFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 385 i~~~LG~G--~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
++++||+| +|++||++.+..+|+.||+|++..+. .....+.+|+.+++.++ ||||+++++++...+..+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------hpniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN------HPNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC------CCCeeeEEEEEEECCEEE
Confidence 46789999 67899999999999999999997542 23345666777777664 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ ++.+++...... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.++++||+...
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~ 149 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNL 149 (327)
T ss_pred EEEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhh
Confidence 99999984 677776543221 2889999999999999999999999999999999999985 7789999998643
Q ss_pred cccC----------CccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 539 FQTD----------NLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 539 ~~~~----------~~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
.... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.............. +..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~ 227 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTV 227 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCc
Confidence 3211 1122356778999999976 4689999999999999999999999986554443333221 111
Q ss_pred cHHHHh---hhhhhhhhhhccccchhhhhccccccccCCcc--chhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 607 DLEMLM---QGQEIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 607 ~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
+...-. ..+................. ........+.. ..........++.+.+||++||+.||++|||++|||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGE-STTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCc-ccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 100000 00000000000000000000 00000000000 0000111234567999999999999999999999999
Q ss_pred CCCCCC
Q 005590 682 HPWLQH 687 (689)
Q Consensus 682 hpwf~~ 687 (689)
||||++
T Consensus 307 ~p~f~~ 312 (327)
T cd08227 307 HSFFKQ 312 (327)
T ss_pred Chhhhh
Confidence 999975
No 153
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3e-36 Score=316.71 Aligned_cols=254 Identities=24% Similarity=0.305 Sum_probs=201.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.|++.+.||+|+||+||++.+..+++.+|+|++.... .......+|+.+++.++ |++|+++++.+...+.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN------SQFVVNLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC------CcCceeEEEEEecCCE
Confidence 3788899999999999999999999999999987542 12234567888888775 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+.+.... ...+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~ 148 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEEeccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCc
Confidence 9999999986 4555443221 123899999999999999999999999999999999999985 67899999998
Q ss_pred cccccC--CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 537 SCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 537 s~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
+..... ......+++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........+.......
T Consensus 149 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-------- 220 (285)
T cd05632 149 AVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-------- 220 (285)
T ss_pred ceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--------
Confidence 865432 2233578999999999999899999999999999999999999998765443333322111000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
...++ ...+..+.+||.+||+.||++||| +.++++||||+.
T Consensus 221 -----------------------~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05632 221 -----------------------EEVYS---------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN 266 (285)
T ss_pred -----------------------ccccC---------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence 00011 112356789999999999999999 899999999975
No 154
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.8e-36 Score=318.83 Aligned_cols=279 Identities=27% Similarity=0.418 Sum_probs=215.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~- 455 (689)
.++|++.++||.|+||.||+|++..+++.+|+|++..... ......+|+++++.++ |+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK------HPNVVPLIDMAVERP 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC------CCCccchhhheeccc
Confidence 5899999999999999999999999999999999865321 1234567888888774 67999999987543
Q ss_pred -------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 456 -------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 456 -------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
..+++||||+.+++...+.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.
T Consensus 81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~~ 153 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QGI 153 (311)
T ss_pred ccccccCceEEEEEecCCcCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCC
Confidence 3579999999988777665322 23899999999999999999999999999999999999985 788
Q ss_pred EEEEecCCcccccCCc--------------cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHH
Q 005590 529 IKIIDLGSSCFQTDNL--------------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVV 593 (689)
Q Consensus 529 vkL~DFGls~~~~~~~--------------~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~ 593 (689)
++|+|||++....... ....+++.|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+..
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999886543211 123557889999998754 5889999999999999999999999998888
Q ss_pred HHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCC
Q 005590 594 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR 673 (689)
Q Consensus 594 ~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR 673 (689)
.....+....+.++...+..+......... ......+ ..+........+.+.+||++||+.||.+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 299 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEGV------------HSFTNYP--RTLEERFGKLGPEGLDLLSKLLSLDPYKR 299 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhccccccc------------ccCCCCC--ccHHHHcccCChhHHHHHHHHcccCcccC
Confidence 888888877776666555443322211100 0000011 11222223344678999999999999999
Q ss_pred cCHHHHHcCCCC
Q 005590 674 PTAREALDHPWL 685 (689)
Q Consensus 674 pTa~ElL~hpwf 685 (689)
||+.|++.||||
T Consensus 300 ~t~~ell~~~~f 311 (311)
T cd07866 300 LTASDALEHPYF 311 (311)
T ss_pred cCHHHHhcCCCC
Confidence 999999999998
No 155
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.8e-36 Score=315.55 Aligned_cols=248 Identities=24% Similarity=0.307 Sum_probs=191.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||+|+||.||++++..+|+.||+|++..... .......|+.+++.++ ||||+++++++....+.++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN------SPFIVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC------CCcEEEEEEEEecCCeEEEEEec
Confidence 7999999999999999999999999864321 1234455777777664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|...+..... ..+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 75 MNGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCC
Confidence 985 56555543221 22788889999999999999999999999999999999984 778999999998765432
Q ss_pred --ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 005590 544 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 621 (689)
Q Consensus 544 --~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~ 621 (689)
.....+++.|+|||++.+..++.++|+|||||++|+|++|..||...........+...
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~------------------- 209 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR------------------- 209 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH-------------------
Confidence 22356889999999999988999999999999999999999999754221111111000
Q ss_pred hccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH----HHHHcCCCCCC
Q 005590 622 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 687 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa----~ElL~hpwf~~ 687 (689)
.....++. .....+.++++||++||+.||++||++ +++++||||+.
T Consensus 210 --------------~~~~~~~~------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 210 --------------TLEDEVKF------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred --------------hhcccccc------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 00000000 001235668999999999999999999 77889999974
No 156
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.7e-36 Score=315.46 Aligned_cols=279 Identities=27% Similarity=0.457 Sum_probs=211.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+++++.++ |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR------HENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC------CcchhhHHHhcccCCe
Confidence 47999999999999999999998899999999876432 12345667888777764 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++||||+.++++..+.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~ 147 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFA 147 (286)
T ss_pred EEEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeee
Confidence 99999999986655443221 12789999999999999999999999999999999999984 788999999998
Q ss_pred ccccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
...... .....++..|+|||++.+ ..++.++|+|||||++|+|++|++||......+.+..+....+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence 754322 223467889999999875 3478899999999999999999999998887777777776666544321110
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
... ...+.. ......+............+..+.+||.+||+.+|++|||+.++++||||
T Consensus 228 ~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 228 FQK-NPLFAG------------MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hcc-chHhhc------------cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000 000000 00000111111112222345779999999999999999999999999998
No 157
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.2e-36 Score=316.08 Aligned_cols=253 Identities=26% Similarity=0.420 Sum_probs=201.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-----
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----- 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~----- 454 (689)
.++|++.+.||.|+||.||+|++..+++.+|+|++.........+..|+.+++.+. +|+||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhcccccC
Confidence 47899999999999999999999999999999999876555566778888888774 47899999999863
Q ss_pred -CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 455 -LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 455 -~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
....++||||+.+ +|.+++..... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.++|+
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~--~~~~~l~ 163 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE--NAEVKLV 163 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEe
Confidence 4678999999985 67776654321 23778889999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccC---CccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTD---NLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~---~~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++..... ......+++.|+|||.+. +..++.++|+|||||++|+|++|..||........+..+....
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~- 242 (282)
T cd06636 164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP- 242 (282)
T ss_pred eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC-
Confidence 9999865432 223456889999999986 3468889999999999999999999996544332222111000
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.+. . .....+..+.+||++||+.||.+|||+.|+|+|||
T Consensus 243 ------------------------------------~~~---~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 243 ------------------------------------PPK---L--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred ------------------------------------CCC---C--cccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 000 0 00123467899999999999999999999999999
Q ss_pred C
Q 005590 685 L 685 (689)
Q Consensus 685 f 685 (689)
|
T Consensus 282 ~ 282 (282)
T cd06636 282 I 282 (282)
T ss_pred C
Confidence 7
No 158
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.5e-36 Score=321.22 Aligned_cols=279 Identities=34% Similarity=0.563 Sum_probs=220.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~- 454 (689)
+.++|++.+.||.|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++ ||||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR------HENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC------CCCeeeEeeeEecC
Confidence 568899999999999999999999999999999987642 222355667888888774 6899999999876
Q ss_pred CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 455 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 455 ~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
....++||||++++|..++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+||
T Consensus 82 ~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~df 152 (328)
T cd07856 82 LEDIYFVTELLGTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDF 152 (328)
T ss_pred CCcEEEEeehhccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCcc
Confidence 5678999999988877665421 2778888999999999999999999999999999999984 788999999
Q ss_pred CCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 535 GSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 535 Gls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
|.+...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||...........+...++.++.++...
T Consensus 153 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 153 GLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 998766554445567889999999866 5689999999999999999999999998888777888888888888766543
Q ss_pred hhhh--hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.... .+++. .+. ..............+..+.++|++||+.+|++|||+.+++.||||+.
T Consensus 233 ~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 233 ICSENTLRFVQ-------------SLP--KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred ccchhhHHHHh-------------hcc--ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 2111 00000 000 00011111222234567899999999999999999999999999964
No 159
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=340.31 Aligned_cols=254 Identities=30% Similarity=0.477 Sum_probs=213.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec-chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~-~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
+-|.|+.-||-|+||+||+|.++.++-..|.|++.. .......++.|+.||..+ +||+|+++++.|+..+.++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C------dHP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC------DHPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC------CChHHHHHHHHHhccCceE
Confidence 458888999999999999999998888889998864 345567888899998766 5889999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
|+.|||+|+-.+.+..... ..+++..++.+++|++.||.|||+++|||||||..|||++- +|.|+|+|||.+..
T Consensus 106 iliEFC~GGAVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVSAK 179 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVSAK 179 (1187)
T ss_pred EEEeecCCchHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccccc
Confidence 9999999987776654432 23999999999999999999999999999999999999994 88999999998765
Q ss_pred ccC---CccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 540 QTD---NLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 540 ~~~---~~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
... ..-.+.|||+|||||++. ..+|+.++||||||++|.+|..+.+|-...++..++.+|.+--+|.
T Consensus 180 n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPT----- 254 (1187)
T KOG0579|consen 180 NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT----- 254 (1187)
T ss_pred chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCc-----
Confidence 432 234589999999999974 6789999999999999999999999998888888777765322110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..-|..+ +..|.|||.+||..||+.||++.++|+|||+++
T Consensus 255 ---------------------------LlqPS~W---------s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 255 ---------------------------LLQPSHW---------SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred ---------------------------ccCcchh---------hhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 0011111 245889999999999999999999999999985
No 160
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-36 Score=326.57 Aligned_cols=279 Identities=30% Similarity=0.532 Sum_probs=218.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~-- 454 (689)
..+|.+.+.||+|++|.||++.+..+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 77 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK------HDNIIAIRDILRPPG 77 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC------CCCccCHHHhccccC
Confidence 478999999999999999999999999999999987532 23345667888888774 6799999998763
Q ss_pred --CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 455 --LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 455 --~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
...+++||||+.++|..++... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~ 149 (334)
T cd07855 78 ADFKDVYVVMDLMESDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRIG 149 (334)
T ss_pred CCCceEEEEEehhhhhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEec
Confidence 3578999999998877766432 22899999999999999999999999999999999999984 7889999
Q ss_pred ecCCcccccCC-------ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN-------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~-------~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+....|
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 99998654321 123467889999999866 4588999999999999999999999999888888888888888
Q ss_pred CCcHHHHhhhhh--hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 605 PIDLEMLMQGQE--IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 605 ~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.++.+.+..... ...++. ..... ............+..+.+||++||+.+|++|||+.++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 230 SPSEEVLNRIGSDRVRKYIQ-------------NLPRK--QPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred CChhHhhhhhchhhHHHHHh-------------hcccC--CCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 777666543221 111110 00000 0001111122346779999999999999999999999999
Q ss_pred CCCCC
Q 005590 683 PWLQH 687 (689)
Q Consensus 683 pwf~~ 687 (689)
|||++
T Consensus 295 ~~~~~ 299 (334)
T cd07855 295 PFLAQ 299 (334)
T ss_pred hhhhh
Confidence 99964
No 161
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.8e-36 Score=324.63 Aligned_cols=280 Identities=26% Similarity=0.427 Sum_probs=210.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
.++|++.+.||.|+||.||+|.+..+|+.||+|++.... .......+|+.+++.++ |+||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD------HDNIVKVYEVLGPSGSD 77 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC------CCcchhhHhhhcccccc
Confidence 579999999999999999999999999999999986543 23456777888888774 67999998776543
Q ss_pred -----------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc
Q 005590 456 -----------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 524 (689)
Q Consensus 456 -----------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~ 524 (689)
...++||||++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~- 149 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT- 149 (342)
T ss_pred cccccccccccceEEEEeecccccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-
Confidence 368999999998877666421 2889999999999999999999999999999999999975
Q ss_pred CCCeEEEEecCCcccccCC------ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 005590 525 QRCEIKIIDLGSSCFQTDN------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 597 (689)
Q Consensus 525 ~~~~vkL~DFGls~~~~~~------~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~ 597 (689)
.++.++|+|||.+...... .....++..|+|||.+.. ..++.++|||||||++|+|++|+.||......+...
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~ 229 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229 (342)
T ss_pred CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 4567999999998754321 122356888999998764 568889999999999999999999998877776666
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
.+....+....+............ ... ....+ ...........+.++++||++||+.||.+|||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 295 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSF------------VRN-DGGEP-RRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAE 295 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhh------------hhh-ccccc-CCCHHHHccCCCHHHHHHHHHHhCCCchhccCHH
Confidence 665554433332222111000000 000 00001 1111222234567789999999999999999999
Q ss_pred HHHcCCCCCC
Q 005590 678 EALDHPWLQH 687 (689)
Q Consensus 678 ElL~hpwf~~ 687 (689)
|+|+||||+.
T Consensus 296 ell~h~~~~~ 305 (342)
T cd07854 296 EALMHPYMSC 305 (342)
T ss_pred HHhCCCcccc
Confidence 9999999973
No 162
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7e-36 Score=323.06 Aligned_cols=279 Identities=31% Similarity=0.563 Sum_probs=217.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|.+.+.||+|+||.||++.+..+++.||+|++.... .......+|+.+++.++ |+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~iv~~~~~~~~~ 88 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTPA 88 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC------CCcccceeeeeeec
Confidence 4588999999999999999999999999999999987532 12345667777777764 78999999988643
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 456 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
...++++++++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCEL 159 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCE
Confidence 357899999988887765421 2889999999999999999999999999999999999985 7789
Q ss_pred EEEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 530 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
+|+|||++...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||...+....+..+....+..+.
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999998876555555678899999999876 46889999999999999999999999988877777788777776665
Q ss_pred HHHhhhhhh--hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
..+...... ..++. .+ ..+|.. .........++.+++||.+||+.||.+|||+.++|+||||+
T Consensus 240 ~~~~~~~~~~~~~~~~-------------~~-~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 240 ELLKKISSESARNYIQ-------------SL-TQMPKM-NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HHHhhcccHhHHHHHH-------------Hh-cccCCc-chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 554332211 00000 00 001110 01111112356789999999999999999999999999998
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
+
T Consensus 305 ~ 305 (345)
T cd07877 305 Q 305 (345)
T ss_pred h
Confidence 5
No 163
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=318.31 Aligned_cols=252 Identities=26% Similarity=0.376 Sum_probs=212.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
-.++|..+++||+|.||+|.+++.+.+|+.+|||+++++ ++.....+.|-++|+..+ ||++..+...|+.
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~------HPFLt~LKYsFQt 239 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR------HPFLTSLKYSFQT 239 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc------CcHHHHhhhhhcc
Confidence 346788999999999999999999999999999999875 344556666777777664 7899999999999
Q ss_pred CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 455 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 455 ~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
.+++|+||||..|+-+-+.... ...+++.+.+.+-..|+.||.|||+.+||+||||.+|+|++. +|+|||+||
T Consensus 240 ~drlCFVMeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk--DGHIKitDF 312 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK--DGHIKITDF 312 (516)
T ss_pred CceEEEEEEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc--CCceEeeec
Confidence 9999999999997532222111 233999999999999999999999999999999999999995 999999999
Q ss_pred CCccc---ccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
|+++. .++...++||||.|+|||++....|+.++|+|.+||++|||++|++||.+.+...+...|...
T Consensus 313 GLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e--------- 383 (516)
T KOG0690|consen 313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME--------- 383 (516)
T ss_pred ccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh---------
Confidence 99864 455667799999999999999999999999999999999999999999998887777766411
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQ 686 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~ 686 (689)
...+|. ..+++++.|+..+|..||.+|.. |.|+.+|+||.
T Consensus 384 --------------------------d~kFPr---------~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~ 428 (516)
T KOG0690|consen 384 --------------------------DLKFPR---------TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA 428 (516)
T ss_pred --------------------------hccCCc---------cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhc
Confidence 122332 23467889999999999999985 89999999997
Q ss_pred C
Q 005590 687 H 687 (689)
Q Consensus 687 ~ 687 (689)
.
T Consensus 429 ~ 429 (516)
T KOG0690|consen 429 S 429 (516)
T ss_pred c
Confidence 5
No 164
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.1e-36 Score=354.46 Aligned_cols=261 Identities=26% Similarity=0.367 Sum_probs=204.5
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 376 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 376 ~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
++...++|++++.||+|+||+||+|++..+++.+|+|++... ......+..|+.+++.+. ||||++++++|
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~------HPNIVrl~d~f 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK------HKNIVRYIDRF 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC------CCCcCeEEEEE
Confidence 456678999999999999999999999999999999998753 233456778888888875 68999999998
Q ss_pred EeC--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-------CceeccCCCCcEEEe
Q 005590 453 YHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-------GIIHCDLKPENILIK 522 (689)
Q Consensus 453 ~~~--~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-------gIvHrDLKp~NILl~ 522 (689)
... ..+||||||+.+ +|.+++...... ...+++..++.|+.||+.||.|||+. +||||||||+||||+
T Consensus 82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 82 LNKANQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred EecCCCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 654 579999999984 787777543221 12389999999999999999999985 499999999999996
Q ss_pred cc---------------CCCeEEEEecCCcccccCC--ccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhC
Q 005590 523 SY---------------QRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTG 583 (689)
Q Consensus 523 ~~---------------~~~~vkL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG 583 (689)
.. ....+||+|||++...... .....+|+.|+|||++.+ ..++.++||||||||||+|++|
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 41 2345899999998765432 234578999999999965 4588999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHH
Q 005590 584 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 663 (689)
Q Consensus 584 ~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~ 663 (689)
..||........+...+.... .+|. ...+..+.+||.
T Consensus 240 k~PF~~~~~~~qli~~lk~~p-----------------------------------~lpi--------~~~S~eL~dLI~ 276 (1021)
T PTZ00266 240 KTPFHKANNFSQLISELKRGP-----------------------------------DLPI--------KGKSKELNILIK 276 (1021)
T ss_pred CCCCCcCCcHHHHHHHHhcCC-----------------------------------CCCc--------CCCCHHHHHHHH
Confidence 999976543332222110000 0010 112456889999
Q ss_pred HhcccCCCCCcCHHHHHcCCCCCC
Q 005590 664 TLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 664 ~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.||+.+|.+|||+.|+|.||||+.
T Consensus 277 ~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 277 NLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHhcCChhHCcCHHHHhccHHHhh
Confidence 999999999999999999999964
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.6e-36 Score=305.56 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=203.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|.+.+.||+|++|.||++.+..+++.|++|.+... ......+.+|+++++.++ |+||+++++++...+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD------SSYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC------CCCeehheeeeccCCEE
Confidence 488999999999999999999999999999998753 234456667777777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... ...++...+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~ 148 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVA 148 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccc
Confidence 999999974 7777766432 123888999999999999999999999999999999999985 788999999988
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----------- 217 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV----------- 217 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 7654322 22467889999999999889999999999999999999999998776554444332100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...++ ...+..+.++|++||+.+|++||++.++++|||+
T Consensus 218 -----------------------~~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 218 -----------------------FPPVS---------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -----------------------CCCCc---------cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 00011 0124568899999999999999999999999997
No 166
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.6e-36 Score=318.97 Aligned_cols=287 Identities=26% Similarity=0.322 Sum_probs=206.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||+|+||.||++++..++..+|+|.+..+ .....++.+|+++++.++ ||||+++++++...+++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN------SPYIVGFYGAFYSDGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEeeCCEE
Confidence 4699999999999999999999999999999998754 223456778888888774 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++||||+.+ +|.+++... ..+++..+..++.||+.||.|||+ .+++|+||||+|||++. ++.++|+|||+
T Consensus 75 ~lv~ey~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 146 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKA------GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGV 146 (308)
T ss_pred EEEeeccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCC
Confidence 999999985 677776543 227899999999999999999997 59999999999999984 77899999998
Q ss_pred cccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 537 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 537 s~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
+...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+.......+..... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 224 (308)
T cd06615 147 SGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH--R 224 (308)
T ss_pred cccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCc--c
Confidence 8654332 334578899999999988889999999999999999999999997665443332221111100000000 0
Q ss_pred hhhhhhhccccchhhhhccc-cccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETN-QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
.................... ......|. .. ....+..+++||.+||..||++|||+.++++||||++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 225 PVSGHPPDSPRPMAIFELLDYIVNEPPPK---LP--SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cccCCCCCccchhhHHHHHHHHhcCCCcc---Cc--CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000000000000 00000010 00 01135678999999999999999999999999999763
No 167
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.1e-36 Score=320.43 Aligned_cols=279 Identities=34% Similarity=0.538 Sum_probs=217.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCC--CcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHT--GVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~t--g~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~- 455 (689)
+|++.+.||+|+||.||++++..+ +..||+|++... ........+|+.+++.+. +|+||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence 589999999999999999999887 899999998743 222346677888888874 378999999875432
Q ss_pred ---CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 456 ---EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 456 ---~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
...+++|+|++++|.+.+.... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~ 147 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKIC 147 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeC
Confidence 4689999999988887775322 3889999999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCC-------ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN-------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~-------~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||...+....+..++..+|
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99998754321 123468899999998876 4689999999999999999999999999988899999999999
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.++.+.+........... .. .. ...+ ...+.......+..+.+||.+||+.||++|||+.+++.|||
T Consensus 228 ~~~~~~~~~~~~~~~~~~-------~~----~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 228 TPDEETLSRIGSPKAQNY-------IR----SL-PNIP-KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred CCCHHHHHhhhhhhHHHH-------HH----hc-cccC-CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 888766544322110000 00 00 0000 00111111223567899999999999999999999999999
Q ss_pred CC
Q 005590 685 LQ 686 (689)
Q Consensus 685 f~ 686 (689)
|+
T Consensus 295 ~~ 296 (332)
T cd07857 295 LA 296 (332)
T ss_pred hh
Confidence 96
No 168
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-37 Score=328.50 Aligned_cols=254 Identities=29% Similarity=0.420 Sum_probs=200.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee---cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~---~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
+..|+++++||+||.++||++... ..+.||+|.+. .+....+-+..|+.+|.+|+. |..|+++|+|-...+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg-----~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKG-----HDKIIQLYDYEVTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcC-----CceEEEEeeeeccCc
Confidence 356999999999999999999853 34556666544 345567888999999999985 468999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 457 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 457 ~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.+|+||||=+.+|...+...... .+...++.+.+||+.|+.++|+.||||.||||.|+|+. .|.+||||||.
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGI 505 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGI 505 (677)
T ss_pred eEEEEeecccccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE---eeeEEeeeech
Confidence 99999999888888877654432 44458899999999999999999999999999999998 79999999999
Q ss_pred cccccCCcc-----ccccCccccChhhhcCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 005590 537 SCFQTDNLC-----LYVQSRSYRAPEVIIGL-----------PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 600 (689)
Q Consensus 537 s~~~~~~~~-----~~~gt~~Y~APE~l~~~-----------~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~ 600 (689)
|.......+ .-+||+.||+||.+... +.+.++||||||||||+|+.|+.||.... ..++++.
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~ 583 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLH 583 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHH
Confidence 876554322 35899999999998632 26689999999999999999999996432 2333332
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
.+..| ..+..+|..... -+++++++.||.+||.+|||..|||
T Consensus 584 aI~~P------------------------------~~~Iefp~~~~~--------~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 584 AITDP------------------------------NHEIEFPDIPEN--------DELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred hhcCC------------------------------CccccccCCCCc--------hHHHHHHHHHHhcCcccCCCcHHHh
Confidence 22111 112223332221 1278999999999999999999999
Q ss_pred cCCCCCC
Q 005590 681 DHPWLQH 687 (689)
Q Consensus 681 ~hpwf~~ 687 (689)
+|||++-
T Consensus 626 qhpFl~~ 632 (677)
T KOG0596|consen 626 QHPFLQI 632 (677)
T ss_pred cCccccc
Confidence 9999985
No 169
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.1e-36 Score=316.11 Aligned_cols=283 Identities=27% Similarity=0.466 Sum_probs=216.9
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 376 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 376 ~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
+++..++|++.+.||+|+||.||+|.++.+|+.||+|+++... .......+|+.+++.++ ||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~------h~~i~~~~~~~ 75 (302)
T cd07864 2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN------HRNIVNLKEIV 75 (302)
T ss_pred chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC------CCCeeeeehee
Confidence 3455688999999999999999999999999999999987532 22245567788777764 68999999998
Q ss_pred EeCC----------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 005590 453 YHLE----------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 522 (689)
Q Consensus 453 ~~~~----------~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~ 522 (689)
.... ++++||||+++++..++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++
T Consensus 76 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 150 (302)
T cd07864 76 TDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150 (302)
T ss_pred cCcchhhhccccCCcEEEEEcccCccHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 7654 899999999998777665321 2388999999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCCc----cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 005590 523 SYQRCEIKIIDLGSSCFQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 597 (689)
Q Consensus 523 ~~~~~~vkL~DFGls~~~~~~~----~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~ 597 (689)
. ++.+||+|||++....... ....++..|+|||.+.+. .++.++|||||||++|+|++|++||......+.+.
T Consensus 151 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~ 228 (302)
T cd07864 151 N--KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLE 228 (302)
T ss_pred C--CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 4 7889999999987654322 123457789999988653 57889999999999999999999999888888888
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
.+....+.++...+........+.+.... .. . ...........+..+.+||.+||+.||++|||+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 294 (302)
T cd07864 229 LISRLCGSPCPAVWPDVIKLPYFNTMKPK--------KQ----Y--RRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE 294 (302)
T ss_pred HHHHHhCCCChhhcccccccccccccccc--------cc----c--ccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 88877776665555433222111000000 00 0 0011111122356789999999999999999999
Q ss_pred HHHcCCCC
Q 005590 678 EALDHPWL 685 (689)
Q Consensus 678 ElL~hpwf 685 (689)
++++||||
T Consensus 295 ~il~~~~~ 302 (302)
T cd07864 295 EALNSPWL 302 (302)
T ss_pred HHhcCCCC
Confidence 99999997
No 170
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.6e-36 Score=312.57 Aligned_cols=274 Identities=33% Similarity=0.546 Sum_probs=219.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
|++.+.||.|++|.||++++..+++.+++|.+..... ......+|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN------HPNIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc------CCCcchHHHhhccCCCEE
Confidence 5678899999999999999988999999999875422 3456777888888775 679999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+||||+.+++...+.... ..+++..+..++.||+.||.|||+.+|+|+||||+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~ 147 (283)
T cd05118 75 LVFEFMDTDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARS 147 (283)
T ss_pred EEEeccCCCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEe
Confidence 999999998887766432 23889999999999999999999999999999999999984 78899999998876
Q ss_pred ccCCc---cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 540 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 540 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+.+..+...++.+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccch
Confidence 54432 224577889999999876 78999999999999999999999999988888888888777776666555443
Q ss_pred hhhhhhhccccchhhhhccccccccCCc--cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....... ..++. ...........+..+.+||.+||+.||.+||++.+++.||||
T Consensus 228 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 228 SLARNYK----------------FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhh----------------hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 3211110 00010 001111122346778999999999999999999999999997
No 171
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=331.32 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=213.1
Q ss_pred cCcEEEE--EEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 380 AGRYYVT--EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 380 ~~rY~i~--~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..-|+|. ++||+|-||+||-|++..+|+.||||++.+. .....++.+|+.||+.+. ||.|+.+--.|+.
T Consensus 561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~------HPGiV~le~M~ET 634 (888)
T KOG4236|consen 561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH------HPGIVNLECMFET 634 (888)
T ss_pred HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC------CCCeeEEEEeecC
Confidence 3446665 6899999999999999999999999998753 234578889999999885 6799999999999
Q ss_pred CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC-CCeEEEEe
Q 005590 455 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~-~~~vkL~D 533 (689)
.+..++|||.+.|++++.+...... .+++...+.++.||+.||.|||.++|+|+||||+|||+.+.. -.++||+|
T Consensus 635 ~ervFVVMEKl~GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 635 PERVFVVMEKLHGDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred CceEEEEehhhcchHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecc
Confidence 9999999999999999887654332 389999999999999999999999999999999999997532 35899999
Q ss_pred cCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHH
Q 005590 534 LGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 534 FGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~e~ 610 (689)
||+|++.++. ....+|||.|+|||++.++.|....|+||+|||+|.-|+|..||..+ +..++++.-.-+.++.| |
T Consensus 711 FGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~P--W 788 (888)
T KOG4236|consen 711 FGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNP--W 788 (888)
T ss_pred ccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCc--h
Confidence 9999998765 34579999999999999999999999999999999999999999643 33333333221111111 0
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+++++|||..+|+..-++|.|.++.|.|||+|+
T Consensus 789 -----------------------------------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 789 -----------------------------------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred -----------------------------------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 123466889999999999999999999999999986
No 172
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.5e-35 Score=304.56 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=199.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-CCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-LEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~-~~~ 457 (689)
+|++.+.||+|++|.||++++..+++.+|+|.+..+. .......+|+.+++.++ |+|++++++.+.. ...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK------HPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC------CCCeeeeeeeecCCCCE
Confidence 5899999999999999999999999999999987532 22345666777777664 6799999998764 446
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++||||+.+ +|.+.+.... ...+++..++.++.|++.||.+||+.||+|+||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~ 148 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGI 148 (257)
T ss_pred EEEEecccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccc
Confidence 8999999985 6766665321 123889999999999999999999999999999999999984 78899999999
Q ss_pred cccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------- 219 (257)
T cd08223 149 ARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--------- 219 (257)
T ss_pred eEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---------
Confidence 8755322 2335678899999999999999999999999999999999999987655444333321100
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...+ ...+..+.+||.+||+.||++|||+.++++||||
T Consensus 220 -------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 -------------------------PPMP---------KDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -------------------------CCCc---------cccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001 1134568899999999999999999999999997
No 173
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.2e-36 Score=312.19 Aligned_cols=256 Identities=28% Similarity=0.396 Sum_probs=198.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||+|+||.||++++..+|+.||+|+++... ........|+.++.+. .+|+||+++++++......
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~iv~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----VDCPYTVTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----cCCCCeeeeeEEEecCCcE
Confidence 46999999999999999999999999999999987642 2223444555543322 3588999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||++++|.+++...... ...+++..++.++.||+.||.|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhcccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeecccc
Confidence 999999999888777543222 23489999999999999999999997 9999999999999984 788999999998
Q ss_pred ccccCCc--cccccCccccChhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHH
Q 005590 538 CFQTDNL--CLYVQSRSYRAPEVIIG----LPYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 538 ~~~~~~~--~~~~gt~~Y~APE~l~~----~~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~e~ 610 (689)
....... ....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||... ...+.+..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 223 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-------- 223 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--------
Confidence 7654322 23467889999999865 45788999999999999999999999642 111111111100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
....+|. ...+..+.+||.+||..+|.+|||+.++++||||++
T Consensus 224 --------------------------~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 224 --------------------------PSPQLPA--------EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266 (283)
T ss_pred --------------------------CCCCCCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence 0001110 012456889999999999999999999999999975
No 174
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.4e-36 Score=322.88 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=194.1
Q ss_pred eecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
+-.++|++.+.||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.++..+. .||||+++++
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~ 78 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLG 78 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEe
Confidence 3357899999999999999999975 2456789999987532 23456778999888884 3789999999
Q ss_pred EEEeC-CeEEEEEEccc-cchHHHHhhhhccC------------------------------------------------
Q 005590 451 YFYHL-EHLFIVCELLR-ANLYEFQKFNQESG------------------------------------------------ 480 (689)
Q Consensus 451 ~f~~~-~~l~lVmEy~~-g~L~~l~~~~~~~~------------------------------------------------ 480 (689)
++... ..+++||||+. |+|.+++.......
T Consensus 79 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 79 ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred EecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 88764 46899999998 47777765432100
Q ss_pred --------CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc-----ccc
Q 005590 481 --------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLY 547 (689)
Q Consensus 481 --------~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~ 547 (689)
....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+++...... ...
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~ 236 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSA 236 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCC
Confidence 0123778889999999999999999999999999999999984 7789999999987543221 123
Q ss_pred ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhcccc
Q 005590 548 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYD 626 (689)
Q Consensus 548 ~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~ 626 (689)
.+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+......
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~------------------------ 292 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD------------------------ 292 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc------------------------
Confidence 44678999999999999999999999999999997 99999875432222111100
Q ss_pred chhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 627 LYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 627 ~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......| ...++.+.+||.+||+.||.+|||+.|+++
T Consensus 293 ---------~~~~~~~---------~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 293 ---------GTRMRAP---------ENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ---------CCCCCCC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0000111 122456889999999999999999999985
No 175
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-35 Score=309.81 Aligned_cols=277 Identities=30% Similarity=0.460 Sum_probs=213.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe--
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH-- 457 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~-- 457 (689)
|++.+.||+|+||.||++++..+++.||+|+++.... ......+|+.+++.+.. ..|+||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---FEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---cCCCCcceEEEEEeeccCCC
Confidence 6789999999999999999988899999999975322 22345567778877753 358999999999998776
Q ss_pred ---EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 458 ---LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 458 ---l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
.+++|||+.+++.+++..... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.++|+||
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~df 151 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADF 151 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEecc
Confidence 999999999888877654322 13889999999999999999999999999999999999995 688999999
Q ss_pred CCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 535 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 535 Gls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
|.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||......+.+.++...........+.
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred CcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 998765432 223457888999999999899999999999999999999999999988888887777555443322221
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....... .......+. ............+.+||.+||+.||++||++.++++||||
T Consensus 232 ~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 232 RNVSLPR---------------SSFPSYTPR--SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCcccch---------------hhccccccc--chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 1110000 000000000 0011111234668899999999999999999999999997
No 176
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.1e-35 Score=316.34 Aligned_cols=254 Identities=26% Similarity=0.369 Sum_probs=204.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|++|.||+|.+..+++.+|+|.+..... ....+..|+++++.+. |+||+++++.+....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD------HPFLPTLYASFQTET 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC------CCCchhheeeeecCC
Confidence 479999999999999999999999999999999876432 3345667777777664 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+.+ +|.+++.... ...+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg 148 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQP----GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFD 148 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCC----CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecc
Confidence 99999999985 6777665321 223889999999999999999999999999999999999985 7789999999
Q ss_pred CcccccCC--------------------------------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005590 536 SSCFQTDN--------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 583 (689)
Q Consensus 536 ls~~~~~~--------------------------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG 583 (689)
++...... .....|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 87543211 1123678889999999998899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHH
Q 005590 584 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 663 (689)
Q Consensus 584 ~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~ 663 (689)
..||.+.+....+..+.... ...+.. ...+..+.+||.
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~-----------------------------------~~~~~~-------~~~~~~~~~li~ 266 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKE-----------------------------------VTFPGS-------PPVSSSARDLIR 266 (316)
T ss_pred CCCCCCCchHHHHHHHhcCC-----------------------------------ccCCCc-------cccCHHHHHHHH
Confidence 99998776555444432100 001110 013467899999
Q ss_pred HhcccCCCCCcC----HHHHHcCCCCCCC
Q 005590 664 TLLEINPQRRPT----AREALDHPWLQHP 688 (689)
Q Consensus 664 ~mL~~dP~kRpT----a~ElL~hpwf~~~ 688 (689)
+||..||++||| +.|+|+||||++.
T Consensus 267 ~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 267 KLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 999999999999 9999999999863
No 177
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.6e-36 Score=308.13 Aligned_cols=256 Identities=27% Similarity=0.408 Sum_probs=203.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC---
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--- 456 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~--- 456 (689)
.++|++.+.||+|++|.||+|++..+++.+++|++.........+.+|+.+++.+. .|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence 47899999999999999999999989999999999876655677888999888874 3789999999997644
Q ss_pred ---eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 457 ---HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 457 ---~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
..++||||+.+ +|.+++..... ....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~ 155 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLV 155 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEEC
Confidence 58999999986 67666654321 1233889999999999999999999999999999999999984 7889999
Q ss_pred ecCCcccccCC---ccccccCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....++..|+|||++.. ..++.++|+|||||++|+|++|..||........+..+.....
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 235 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP 235 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC
Confidence 99988654322 233567889999999854 3477899999999999999999999976544333333221000
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
..+.. ....+..+++||++||..||++|||+.++++|||
T Consensus 236 ----------------------------------~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 236 ----------------------------------PTLKS-------PENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred ----------------------------------CCCCc-------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 00000 0012356889999999999999999999999999
Q ss_pred C
Q 005590 685 L 685 (689)
Q Consensus 685 f 685 (689)
+
T Consensus 275 ~ 275 (275)
T cd06608 275 I 275 (275)
T ss_pred C
Confidence 7
No 178
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=322.07 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=210.7
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
-|.|+++||+|+||.||+|.++.+|+.+|||.++.+.+ ...+..|+.|++++.. +++|++|+.|.....++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~S------~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCKS------KYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcCC------chhhhhhhhhccCCceEee
Confidence 36788899999999999999999999999999988764 4677889999988864 5899999999999999999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
||||+ |++.+.++..+.. +++.++..+++..+.||+|||...-||||||..|||++. +|..||+|||.+...
T Consensus 107 MEYCGAGSiSDI~R~R~K~-----L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKP-----LSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQL 179 (502)
T ss_pred hhhcCCCcHHHHHHHhcCC-----ccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchh
Confidence 99999 6788887765543 999999999999999999999999999999999999995 899999999999887
Q ss_pred cCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 TDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
++. ..+..|||.|||||++..-.|+.++||||||++..||..|++||..-.+..-+. +++.-|++.+
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF----MIPT~PPPTF------ 249 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF----MIPTKPPPTF------ 249 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE----eccCCCCCCC------
Confidence 764 456789999999999999999999999999999999999999997643322111 1111111111
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..|+.+ +.+|.|||++||..+|++|.||.+|++|||++++
T Consensus 250 ----------------------~KPE~W---------S~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 250 ----------------------KKPEEW---------SSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred ----------------------CChHhh---------hhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 111111 2458899999999999999999999999999864
No 179
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1e-35 Score=313.12 Aligned_cols=254 Identities=31% Similarity=0.476 Sum_probs=200.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++.|++++.||+|+||.||++++..+++.+++|++.... .....+.+|+.+++.+ .|+||+++++.+......
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC------NHPYIVKLLGAFYWDGKL 84 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC------CCCcEeeeEEEEEeCCeE
Confidence 467999999999999999999999999999999987543 3345566777777766 478999999999999999
Q ss_pred EEEEEccccchHH-HHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRANLYE-FQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~L~~-l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.++.+. ++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++.++|+|||++
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~ 157 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL--DGDIKLADFGVS 157 (292)
T ss_pred EEEEecCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC--CCCEEEccCccc
Confidence 9999999976443 332211 12889999999999999999999999999999999999984 788999999987
Q ss_pred ccccCC---ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
...... .....+++.|+|||++. ...++.++|+|||||++|+|++|..||...+......++.....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---- 233 (292)
T cd06644 158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP---- 233 (292)
T ss_pred eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc----
Confidence 654322 22346788999999985 345788999999999999999999999776544433333211000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..+. ....+..+.+||.+||..||++||++.++++||||+.
T Consensus 234 ------------------------------~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 234 ------------------------------TLSQ-------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred ------------------------------cCCC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0000 0112345789999999999999999999999999975
No 180
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.5e-36 Score=310.79 Aligned_cols=275 Identities=33% Similarity=0.510 Sum_probs=222.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
|++.+.||+|++|.||+|++..+++.+|+|++... .........|+.+++.++ |++|+++++++......+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK------HPNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC------CCCHHHHHhhhhcCCceE
Confidence 57788999999999999999999999999999864 233455667888888774 689999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+||||+.++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~ 147 (282)
T cd07829 75 LVFEYCDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARA 147 (282)
T ss_pred EEecCcCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccc
Confidence 999999999888876542 23889999999999999999999999999999999999985 78899999999876
Q ss_pred ccCCc---cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 540 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 540 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... ....++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+....+.+.++...++.++..+|....
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc
Confidence 54322 223457789999999876 78999999999999999999999999999888999999888888877776654
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
... ++...... .+ ...........+..+.++|++||+.||++||++.+++.||||
T Consensus 228 ~~~-~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 228 KLP-DYKPTFPK-------------FP-PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccc-cccccccc-------------cC-ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 443 11110000 00 000111122235678999999999999999999999999998
No 181
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.7e-36 Score=311.51 Aligned_cols=276 Identities=32% Similarity=0.538 Sum_probs=219.0
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
|++.+.||+|++|+||+|++..+++.|+||.+..... ......+|+..++.+. .|++|+++++++...+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhcCCcEEE
Confidence 6788999999999999999988999999999875422 1223345666665553 27899999999999999999
Q ss_pred EEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 461 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 461 VmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
||||+.+++.+.+.... ...+++..+..++.||+.+|.|||++|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 v~e~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~ 149 (283)
T cd07830 76 VFEYMEGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREI 149 (283)
T ss_pred EEecCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceec
Confidence 99999888888776433 123889999999999999999999999999999999999985 788999999998765
Q ss_pred cCC--ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 TDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~~~--~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
... .....++..|+|||++.. ..++.++|+||||+++++|++|++||+.....+.+..+...+++++.+.|..+...
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 432 233567889999998854 45789999999999999999999999999888888899889998888777665444
Q ss_pred hhhhhccccchhhhhccccccccCCccc--hhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...+. ..++... .+.......+..+++||++||+.||++|||+.|++.||||
T Consensus 230 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 230 ASKLG----------------FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hcccc----------------ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 32221 1111100 0111111224678999999999999999999999999997
No 182
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.5e-35 Score=309.71 Aligned_cols=258 Identities=25% Similarity=0.362 Sum_probs=201.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
..++|.+.+.||+|+||.||++.+..+++.+|+|++...........+|+.+++.+. +|+||+++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEEecccc
Confidence 357899999999999999999999999999999999765444456677888887774 478999999998754
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 456 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 456 --~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
...++||||+.+ +|.+++..... ....+++..++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~--~~~~kl~ 170 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLV 170 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEe
Confidence 368999999975 67776653221 1223889999999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCC---ccccccCccccChhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~---~~~~~gt~~Y~APE~l~~~-----~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....++..|+|||++... .++.++|+|||||++|+|++|+.||........+..+.....
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~ 250 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP 250 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC
Confidence 99998754322 2234678899999998643 368899999999999999999999976554433333211000
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
+ ....+ ......+.+||.+||+.+|++||++.|+++|||
T Consensus 251 --~------------------------------~~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 251 --P------------------------------TLLHP---------EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred --C------------------------------CCCcc---------cccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 0 00000 011245889999999999999999999999999
Q ss_pred CC
Q 005590 685 LQ 686 (689)
Q Consensus 685 f~ 686 (689)
|+
T Consensus 290 ~~ 291 (291)
T cd06639 290 IK 291 (291)
T ss_pred cC
Confidence 96
No 183
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.1e-35 Score=305.17 Aligned_cols=250 Identities=29% Similarity=0.463 Sum_probs=203.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
++|++.+.||.|+||.||++++..+++.+++|.+..... ...+.+|+++++.+ .|+||+++++.+....+.++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC------DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC------CCCcEeeeeeeeecCCcEEE
Confidence 579999999999999999999988899999999987644 56788888888877 47899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
++||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++..
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~ 148 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQ 148 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchh
Confidence 9999985 6766664322 23889999999999999999999999999999999999985 77899999999876
Q ss_pred ccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 540 QTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 540 ~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
..... ....++..|+|||++.+..++.++||||+|+++|+|++|+.||...........+...
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 214 (256)
T cd06612 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK-------------- 214 (256)
T ss_pred cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--------------
Confidence 54332 2345788999999999999999999999999999999999999765443322111100
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....... ....+..+.+||.+||+.||++|||+.|+|+||||
T Consensus 215 --------------------~~~~~~~-------~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 215 --------------------PPPTLSD-------PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred --------------------CCCCCCc-------hhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0000000 01123568899999999999999999999999997
No 184
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-35 Score=309.79 Aligned_cols=257 Identities=26% Similarity=0.397 Sum_probs=200.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-----
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY----- 453 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~----- 453 (689)
..++|++.+.||+|+||.||++++..+++.+|+|++.........+.+|+.+++.+. +|+||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeeeeeecccC
Confidence 457899999999999999999999999999999998764444456778888888875 3789999999884
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.....++||||+.+ +|.+++..... ....+++..++.++.|++.||.|||+.+|+||||||+||+++. ++.++|+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~ 166 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLV 166 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC--CCCEEEc
Confidence 34579999999985 66666543221 1234888999999999999999999999999999999999985 6779999
Q ss_pred ecCCcccccCC---ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||++...... .....+++.|+|||++. +..++.++|+||+||++|+|++|+.||........+..+....
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~- 245 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP- 245 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC-
Confidence 99998764432 22346889999999985 3457889999999999999999999997654333222111000
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
......| ...+..+.+||.+||+.||++|||+.|+|+|+|
T Consensus 246 -------------------------------~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 246 -------------------------------PPTLHQP---------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred -------------------------------CCcccCC---------CCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 0000001 012356889999999999999999999999999
Q ss_pred C
Q 005590 685 L 685 (689)
Q Consensus 685 f 685 (689)
|
T Consensus 286 ~ 286 (286)
T cd06638 286 I 286 (286)
T ss_pred C
Confidence 7
No 185
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=326.69 Aligned_cols=242 Identities=25% Similarity=0.379 Sum_probs=203.4
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
++.++.||+|-||.||++.+.. ...||+|.++........+.+|+++|+.|+ |++||++++++...+.++|||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~------H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLR------HEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCc------ccCeEEEEEEEecCCceEEEE
Confidence 4455679999999999999743 358999999886666678889999999997 568999999999988999999
Q ss_pred Eccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
|||. |+|+++++.. ....+...++..++.||++|++||+++++|||||...||||+. +..+||+|||+|+...
T Consensus 281 E~m~~GsLl~yLr~~----~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~--~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTR----EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE--DLVVKISDFGLARLIG 354 (468)
T ss_pred EecccCcHHHHhhhc----CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc--CceEEEcccccccccC
Confidence 9998 7899998862 2234889999999999999999999999999999999999994 7899999999999665
Q ss_pred CCccc-ccc---CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 542 DNLCL-YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 542 ~~~~~-~~g---t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
+.... ..+ ...|.|||.+....++.++|||||||+||||+| |+.||++-+..+++..+.+.
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-------------- 420 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-------------- 420 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc--------------
Confidence 54432 222 456999999999999999999999999999999 99999999999988887522
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
+.+|.... .+.++.+++..||..+|++|||.+.+.
T Consensus 421 ----------------------yRlp~P~~-------CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 421 ----------------------YRLPRPEG-------CPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ----------------------CcCCCCCC-------CCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 22222222 345677999999999999999988765
No 186
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=341.69 Aligned_cols=246 Identities=28% Similarity=0.458 Sum_probs=201.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee-cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE-EEe---
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY-FYH--- 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~-~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~-f~~--- 454 (689)
..+++|.++|.+|||+.||+|++...|..||+|++- .+........+|+.+|+.|. +|+|||.+++. ...
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-----gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-----GHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----CCCceeeEeccccccccC
Confidence 468999999999999999999998888999999764 46677788999999999997 47899999993 321
Q ss_pred ---CCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEeccCCCe
Q 005590 455 ---LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 455 ---~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g--IvHrDLKp~NILl~~~~~~~ 528 (689)
.-+.+|.||||. |+|.+++....... |++.++++|++|+++|+.+||.+. |||||||-+||||.. ++.
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~----lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~--~g~ 184 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTR----LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA--DGN 184 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC--CCC
Confidence 135889999999 69999987554332 999999999999999999999998 999999999999994 789
Q ss_pred EEEEecCCcccccCCcc------------ccccCccccChhhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH
Q 005590 529 IKIIDLGSSCFQTDNLC------------LYVQSRSYRAPEVI---IGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV 593 (689)
Q Consensus 529 vkL~DFGls~~~~~~~~------------~~~gt~~Y~APE~l---~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~ 593 (689)
+||||||.++....... ...-|+.|+|||++ .+.+++.|+|||+|||+||.||....||......
T Consensus 185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 99999999865332221 13458999999997 4778999999999999999999999999754221
Q ss_pred HHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCC
Q 005590 594 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR 673 (689)
Q Consensus 594 ~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR 673 (689)
.+ ....|.+|..... ...|++||+.||+.||.+|
T Consensus 265 aI---------------------------------------lng~Y~~P~~p~y-------s~~l~~LI~~mL~~nP~~R 298 (738)
T KOG1989|consen 265 AI---------------------------------------LNGNYSFPPFPNY-------SDRLKDLIRTMLQPNPDER 298 (738)
T ss_pred eE---------------------------------------EeccccCCCCccH-------HHHHHHHHHHHhccCcccC
Confidence 11 1235566654332 3458899999999999999
Q ss_pred cCHHHHHcC
Q 005590 674 PTAREALDH 682 (689)
Q Consensus 674 pTa~ElL~h 682 (689)
|++-+++.+
T Consensus 299 PnI~Qv~~~ 307 (738)
T KOG1989|consen 299 PNIYQVLEE 307 (738)
T ss_pred CCHHHHHHH
Confidence 999998864
No 187
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-35 Score=314.13 Aligned_cols=252 Identities=30% Similarity=0.483 Sum_probs=200.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.++|++.+.||+|+||.||++++..+++.||+|.+.... .....+.+|+.+++.+ +|+||+++++++....+.
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC------CCCCEeeEEEEEecCCEE
Confidence 478999999999999999999999999999999987532 2234556777777765 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++... .+++..+..++.|++.||.|||+.||+||||||+|||++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~ 162 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (297)
T ss_pred EEeecccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccc
Confidence 999999985 566655321 2788899999999999999999999999999999999984 788999999988
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+....+..+.. .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~---------- 231 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NG---------- 231 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CC----------
Confidence 654332 2234678899999999998899999999999999999999999976543221111100 00
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|.. ......+..+++||.+||..||++|||+.++++||||+.
T Consensus 232 --------------------------~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 232 --------------------------TPEL----QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred --------------------------CCCC----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 0000 001123456889999999999999999999999999975
No 188
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.1e-35 Score=309.56 Aligned_cols=251 Identities=29% Similarity=0.425 Sum_probs=205.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||.|++|.||+|++..+++.+|+|++..+. .....+.+|+.+++.++ |+||+++++++......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR------SPYITKYYGSFLKGSKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC------CCCeeeeeEEEEECCeE
Confidence 47899999999999999999999999999999987643 23345677888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+.+ +|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~ 145 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVS 145 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999985 677766532 3889999999999999999999999999999999999995 788999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----------- 214 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN----------- 214 (274)
T ss_pred eeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-----------
Confidence 765432 234567888999999999889999999999999999999999997665443333222110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
...++.. ..+..+.++|.+||..+|++|||++++++||||++.
T Consensus 215 -----------------------~~~~~~~--------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 215 -----------------------PPSLEGN--------KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred -----------------------CCCCccc--------ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 0001100 024568899999999999999999999999999863
No 189
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-35 Score=302.88 Aligned_cols=249 Identities=22% Similarity=0.369 Sum_probs=202.7
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||+|+||.||++++..+|+.||+|.+... ......+.+|+.+++.++ |+||+++++++...++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK------HPNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC------CCCeeeeEeeecCCCeE
Confidence 689999999999999999999999999999998743 223346677888877764 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+.+..... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~ 148 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIA 148 (256)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccce
Confidence 999999975 67776653221 22788899999999999999999999999999999999984 778999999998
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....+++.|+|||++.+..++.++|+|||||++|+|++|..||......+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~----------- 217 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS----------- 217 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----------
Confidence 7654322 23457888999999998889999999999999999999999998766555444432100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+ ...+..+.++|.+||+.+|.+||++.++|+||||
T Consensus 218 -----------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 218 -----------------------YPPVS---------SHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -----------------------CCCCc---------ccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 00001 1224568899999999999999999999999997
No 190
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-35 Score=311.33 Aligned_cols=252 Identities=28% Similarity=0.456 Sum_probs=202.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..+|++.+.||+|++|.||++++..+++.+|+|.+.... .....+.+|+.+++.+ .|+||+++++.+....+.
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~------~h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDSYLVGDEL 92 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC------CCCCEeeEEEEEEeCCEE
Confidence 368999999999999999999999999999999987543 2235566788877766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++... .++...+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~ 163 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 163 (296)
T ss_pred EEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccc
Confidence 999999985 676665321 2788899999999999999999999999999999999984 778999999988
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||........+..+... +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~--------- 233 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT--------- 233 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC---------
Confidence 654322 22346888999999999888999999999999999999999999766543322221100 00
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+. .......+.+||.+||..+|++|||+.++++||||..
T Consensus 234 ------------------------~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 234 ------------------------PELQN-------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred ------------------------CCCCC-------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 00000 0112356889999999999999999999999999975
No 191
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1e-35 Score=310.60 Aligned_cols=254 Identities=31% Similarity=0.463 Sum_probs=203.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
++|++++.||.|+||.||++++..++..+|+|++.... .....+.+|+.+++.++ |+||+++++.+......+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK------HPNIVGLYEAYFYENKLW 78 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC------CCceeEEEEEEecCCeEE
Confidence 57999999999999999999998899999999987543 33456778888888774 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~--~~~~~l~d~g~~~ 151 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL--DGDVKLADFGVSA 151 (280)
T ss_pred EEeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC--CCCEEEccCccch
Confidence 99999986 5655554322 23899999999999999999999999999999999999984 7889999999876
Q ss_pred cccCC---ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
..... .....+++.|+|||.+. ...++.++|+|||||++|+|++|..||........+..+.....+
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----- 226 (280)
T cd06611 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP----- 226 (280)
T ss_pred hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC-----
Confidence 54322 23356889999999985 345788999999999999999999999876554444333211000
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
....| ...+..+.+||.+||+.+|.+||++.++|+||||.+.
T Consensus 227 ---------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 227 ---------------------------TLDQP---------SKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred ---------------------------CcCCc---------ccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00001 1123467899999999999999999999999999763
No 192
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.5e-35 Score=310.09 Aligned_cols=251 Identities=32% Similarity=0.458 Sum_probs=199.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
|++.+.||+|+||.||++++..++..+++|.+... ......+.+|+++++.+ +|+||+++++++......++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC------CCCCeeeEEEEEeeCCEEEEE
Confidence 67889999999999999999999999999998653 23345667788887776 478999999999999999999
Q ss_pred EEccccchH-HHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g~L~-~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+.++.+ .++... ...+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~-----~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~ 153 (282)
T cd06643 81 IEFCAGGAVDAVMLEL-----ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL--DGDIKLADFGVSAKN 153 (282)
T ss_pred EEecCCCcHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc--CCCEEEccccccccc
Confidence 999987544 433321 123889999999999999999999999999999999999985 778999999998654
Q ss_pred cCC---ccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 541 TDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 541 ~~~---~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
... .....+++.|+|||++. +..++.++|+||+||++|+|++|++||...+.......+.....+
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~------- 226 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP------- 226 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC-------
Confidence 322 22356789999999984 445788999999999999999999999876655544443211100
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.++. ....+..+.+||.+||+.||.+|||+.++++||||..
T Consensus 227 ---------------------------~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 227 ---------------------------TLAQ-------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred ---------------------------CCCC-------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 0000 0112356889999999999999999999999999974
No 193
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.9e-36 Score=309.06 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=197.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.++|++.+.||+|+||.||+|++..+++.||+|+++... .......+|+.+++.+ +|+||+++++.+...+..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l------~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC------KHSNIVAYFGSYLRRDKL 81 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC------CCCCeeeEEEEEEeCCEE
Confidence 357889999999999999999999999999999987643 2234456677777766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~ 153 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVS 153 (267)
T ss_pred EEEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceee
Confidence 999999985 6777665332 2889999999999999999999999999999999999984 778999999998
Q ss_pred ccccCC---ccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
...... .....+++.|+|||++. ...++.++|+|||||++|+|++|..||........+..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--------- 224 (267)
T cd06645 154 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--------- 224 (267)
T ss_pred eEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc---------
Confidence 654432 23357899999999985 456889999999999999999999999654432222211100
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
....+.. . .....+..+.+||.+||..+|++|||++++++|||
T Consensus 225 --------------------------~~~~~~~---~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 225 --------------------------NFQPPKL---K-DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred --------------------------CCCCCcc---c-ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0000000 0 00012356889999999999999999999999999
No 194
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.1e-35 Score=302.45 Aligned_cols=256 Identities=27% Similarity=0.400 Sum_probs=202.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||.|+||+||+|.+..++..+|+|++.... .....+.+|+.+++.+. |+||+++++.+...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN------HPNVVKYYTSFVVGDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC------CCCEEEEEEEEeeCCEE
Confidence 47999999999999999999998899999999987542 23466778888777664 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|||++.+ +|.+++..... ...+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~ 149 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVS 149 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchH
Confidence 999999985 67666653321 123889999999999999999999999999999999999985 678999999988
Q ss_pred ccccCCc-------cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 538 CFQTDNL-------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 538 ~~~~~~~-------~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
....... ....++..|+|||++... .++.++|+|||||++|+|++|..||...+....+....... +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~---~-- 224 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND---P-- 224 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC---C--
Confidence 6544321 234678899999998876 78999999999999999999999997665544333322110 0
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
..++... .....+..+++||.+||..||++|||+.++++||||
T Consensus 225 -----------------------------~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 225 -----------------------------PSLETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -----------------------------CCcCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0000000 011234668899999999999999999999999998
No 195
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-35 Score=305.08 Aligned_cols=247 Identities=31% Similarity=0.455 Sum_probs=197.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----------~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
+|.+.+.||+|++|.||+|.+..+++.+|+|.+..... ....+.+|+.+++.++ |+||++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~ 74 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ------HENIVQYLGS 74 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC------CCCeeeEEEE
Confidence 57888999999999999999988999999998864321 2245666777777764 7899999999
Q ss_pred EEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 452 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 452 f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
+......++||||+.+ +|.+++.... .+++..++.++.|++.||.|||+.|++||||+|+||+++. ++.++
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~ 146 (267)
T cd06628 75 SLDADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIK 146 (267)
T ss_pred EEeCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEE
Confidence 9999999999999975 6766665322 2788899999999999999999999999999999999984 78899
Q ss_pred EEecCCcccccCC---------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 005590 531 IIDLGSSCFQTDN---------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 531 L~DFGls~~~~~~---------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~ 601 (689)
|+|||.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||........+..+..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 226 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence 9999988755421 1123578889999999988899999999999999999999999986544332222210
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
. ....+| ...+..+.+||++||+.||.+||++.|+++
T Consensus 227 ~----------------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N----------------------------------ASPEIP---------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c----------------------------------CCCcCC---------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 000111 113456889999999999999999999999
Q ss_pred CCCC
Q 005590 682 HPWL 685 (689)
Q Consensus 682 hpwf 685 (689)
||||
T Consensus 264 ~~~~ 267 (267)
T cd06628 264 HPFL 267 (267)
T ss_pred CCCC
Confidence 9997
No 196
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.3e-35 Score=300.10 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=205.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++++.||.|+||.||.+++..+++.+++|.+... ......+.+|+.+++.++ |+||+++++++...+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ------HPNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC------CCCeeEEEeEEecCCeE
Confidence 699999999999999999999999999999987643 333456778888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~ 148 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGIS 148 (256)
T ss_pred EEEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcce
Confidence 999999985 7777765432 223889999999999999999999999999999999999984 778999999998
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||......+....+... ..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~------- 219 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT------- 219 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC-------
Confidence 7654332 3356889999999999888999999999999999999999999877666655554310 000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
..+ ...+..+.++|.+||..+|.+|||+.++|+||||
T Consensus 220 -------------------------~~~---------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -------------------------PVV---------SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -------------------------CCc---------cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 000 1224568899999999999999999999999997
No 197
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-35 Score=306.60 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=196.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++...+..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~------~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC------KHCNIVAYFGSYLSREKL 81 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc------CCCCeeeeeEEEEeCCEE
Confidence 467999999999999999999999999999999987542 2334566778777766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||++
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~ 153 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVA 153 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCccc
Confidence 999999985 6666654321 2789999999999999999999999999999999999984 778999999998
Q ss_pred ccccCC---ccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
...... .....+++.|+|||.+. ...++.++|+||+||++|+|++|..||...........+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~--------- 224 (267)
T cd06646 154 AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--------- 224 (267)
T ss_pred eeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC---------
Confidence 765332 22356788999999985 345788999999999999999999998654322211111000
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
....+... .....+..+.+||++||+.+|++|||++++|+|+|
T Consensus 225 --------------------------~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 225 --------------------------NFQPPKLK----DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------------------------CCCCCCCc----cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00000000 00122457899999999999999999999999998
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-35 Score=310.32 Aligned_cols=251 Identities=31% Similarity=0.493 Sum_probs=202.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.+|++.+.||.|++|.||++.+..+++.||+|.+.... .....+.+|+.+++.++ |+||+++++.+......+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK------NPNIVNFLDSFLVGDELF 92 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC------CCceeeeeeeEecCceEE
Confidence 57999999999999999999999999999999886532 23355667777777664 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+|+||+.+ +|..++.. ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++.
T Consensus 93 lv~e~~~~~~L~~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~~ 163 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE-------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFCA 163 (296)
T ss_pred EEEEecCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccch
Confidence 99999986 45554432 12789999999999999999999999999999999999984 7889999999876
Q ss_pred cccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+... +. +
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~-~-------- 233 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT-P-------- 233 (296)
T ss_pred hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC-c--------
Confidence 54332 22346788999999999888999999999999999999999999876554433322100 00 0
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
....+ ...+..+.+||++||..||++|||+.++++||||+.
T Consensus 234 ----------------------~~~~~---------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 234 ----------------------ELQNP---------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred ----------------------ccCCc---------ccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 00000 123456889999999999999999999999999975
No 199
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-35 Score=318.91 Aligned_cols=282 Identities=32% Similarity=0.527 Sum_probs=218.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+.++|++.+.||+|+||.||+|.+..+++.+|+|.+... ........+|+.+++.+. +|+||+++++++..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~ni~~~~~~~~~ 78 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNIVKLLNVIKA 78 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-----CCCCccceeeeecc
Confidence 4568899999999999999999999889999999987542 223345667888888772 36899999999875
Q ss_pred C--CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 455 L--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 455 ~--~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
. ...++||||+.++|.+++... .+.+..++.++.||+.||.|||+.||+|+||||+||+++. ++.+||+
T Consensus 79 ~~~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl~ 149 (337)
T cd07852 79 ENDKDIYLVFEYMETDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKLA 149 (337)
T ss_pred CCCceEEEEecccccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEe
Confidence 4 468999999998887776532 2778888999999999999999999999999999999984 8899999
Q ss_pred ecCCcccccC--------CccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 005590 533 DLGSSCFQTD--------NLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 533 DFGls~~~~~--------~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~ 603 (689)
|||.+..... ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+....+...++....
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 229 (337)
T cd07852 150 DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229 (337)
T ss_pred eccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9998865432 1223567889999998865 457889999999999999999999999988888888888887
Q ss_pred CCCcHHHHhhhhhhhh-hhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 604 GPIDLEMLMQGQEIYK-YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
+..+...+........ .+-. ....+............+..+.+||.+||+.||++|||+.++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 230 GPPSAEDIESIKSPFAATMLD--------------SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCCHHHHHHHHhhhHHHhhh--------------hcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 7766655443321100 0000 000000011111222245678999999999999999999999999
Q ss_pred CCCCC
Q 005590 683 PWLQH 687 (689)
Q Consensus 683 pwf~~ 687 (689)
|||++
T Consensus 296 ~~~~~ 300 (337)
T cd07852 296 PYVAQ 300 (337)
T ss_pred hhhhh
Confidence 99975
No 200
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.7e-36 Score=311.81 Aligned_cols=256 Identities=27% Similarity=0.417 Sum_probs=200.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++++.||+|+||.||++++..+++.||+|.++.. ......+.+|+.+++.++ |+||+++++.+...+..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV------SPYIVDFYGAFFIEGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC------CCcHHhhhhheecCCeE
Confidence 3689999999999999999999989999999988753 233456778888887764 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++||||+.+ +|..++.... ....+++..+..++.||+.||.|||+ .||+|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 149 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGV 149 (286)
T ss_pred EEEEeecCCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC--CCCEEEeecCC
Confidence 999999986 5555544321 12248999999999999999999997 59999999999999985 78899999999
Q ss_pred cccccCC-ccccccCccccChhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 537 SCFQTDN-LCLYVQSRSYRAPEVIIGL------PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 537 s~~~~~~-~~~~~gt~~Y~APE~l~~~------~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+...... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...........+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--- 226 (286)
T cd06622 150 SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD--- 226 (286)
T ss_pred cccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC---
Confidence 8765332 3335678899999998654 35789999999999999999999997654433333222111000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...+|. ..+..+.+||.+||+.+|++||++.++++||||..
T Consensus 227 ----------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 227 ----------------------------PPTLPS---------GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred ----------------------------CCCCCc---------ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 000111 13466889999999999999999999999999864
No 201
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.3e-35 Score=300.07 Aligned_cols=250 Identities=26% Similarity=0.385 Sum_probs=203.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.++ |++|+++++.+...+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS------HPNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC------CCchhheeeeEecCCEE
Confidence 5899999999999999999999999999999987532 23456677888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++. .+..++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK-HKMVVKIGDFGIS 149 (256)
T ss_pred EEEEecCCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEccCCCc
Confidence 999999985 6777765432 123788999999999999999999999999999999999974 3557899999998
Q ss_pred ccccCCc--cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 538 CFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 538 ~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~------------ 217 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT------------ 217 (256)
T ss_pred eecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC------------
Confidence 7654332 23567889999999998889999999999999999999999998765544443332000
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...++. ..+..+.+||.+||..+|++|||+.|+|+||||
T Consensus 218 ----------------------~~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 218 ----------------------FAPISD---------RYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ----------------------CCCCCC---------CcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 000111 124568899999999999999999999999997
No 202
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-35 Score=305.99 Aligned_cols=253 Identities=27% Similarity=0.432 Sum_probs=198.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+|++.+.||+|++|.||++.+..+++.+|+|++.... .....+.+|+++++.++ |+||+++++++..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN------HPHIIRMLGATCE 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC------CCceehhhceecc
Confidence 4788899999999999999999999999999987532 12356677888888774 6799999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.++.++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.|++|+||+|+||+++. ....++|+|
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~-~~~~~~l~d 147 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS-TGQRLRIAD 147 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEcc
Confidence 9999999999986 5666654322 3788999999999999999999999999999999999974 234699999
Q ss_pred cCCcccccCC-------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 534 LGSSCFQTDN-------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 534 FGls~~~~~~-------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
||.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+.....
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 225 (268)
T cd06630 148 FGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-- 225 (268)
T ss_pred cccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc--
Confidence 9998765432 1224678899999999988899999999999999999999999965432222111110000
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
......+| ...++.+.++|.+||+.+|.+|||+.++++||||+
T Consensus 226 ----------------------------~~~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 226 ----------------------------ATTAPSIP---------EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ----------------------------cCCCCCCc---------hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 00000011 12346688999999999999999999999999985
No 203
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.7e-35 Score=302.92 Aligned_cols=248 Identities=25% Similarity=0.346 Sum_probs=196.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+|++.+.||+|+||+||+|.+ .+++.+|+|++.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK------HVNIVQYLGTCLD 73 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC------CCCEeeEeeEeec
Confidence 588899999999999999986 578999999887532 12345666777777664 6799999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
....++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~d 145 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLID 145 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEecc
Confidence 9999999999985 6766664322 2788999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccC---------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 534 LGSSCFQTD---------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 534 FGls~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
||++..... ......++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+....+
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 998765321 12234678899999999998899999999999999999999999976543332222211000
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
. ...++ ...+..+.+||++||+.+|.+|||+.++|+|||
T Consensus 226 ~--------------------------------~~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 226 L--------------------------------MPRLP---------DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred C--------------------------------CCCCC---------CCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0 00011 123466889999999999999999999999999
Q ss_pred C
Q 005590 685 L 685 (689)
Q Consensus 685 f 685 (689)
|
T Consensus 265 ~ 265 (265)
T cd06631 265 L 265 (265)
T ss_pred C
Confidence 7
No 204
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-34 Score=304.90 Aligned_cols=260 Identities=30% Similarity=0.432 Sum_probs=200.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC--C
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--~ 456 (689)
++|.+.+.||.|++|.||++.+..+++.+|+|++.... .....+.+|+++++.+ +|+||++++++|... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC------KSPYIVKYYGAFLDESSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC------CCCCeeeeeeEEEccCCC
Confidence 47999999999999999999999999999999987543 2445677888877766 478999999998653 4
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+++||||+.+ +|.+++..... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg 150 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFG 150 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecc
Confidence 78999999985 67666543222 2233888999999999999999999999999999999999984 7789999999
Q ss_pred CcccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHhhcCCCcHH
Q 005590 536 SSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-----VMILARIIGMLGPIDLE 609 (689)
Q Consensus 536 ls~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~-----~~~l~~i~~~~g~~~~e 609 (689)
++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||..... .+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 225 (287)
T cd06621 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN----- 225 (287)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc-----
Confidence 98654332 2234578899999999998999999999999999999999999975421 111111110000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..+....+.. ...++.+.+||.+||..||++|||+.|+++||||++
T Consensus 226 -------------------------~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 226 -------------------------PELKDEPGNG-------IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred -------------------------hhhccCCCCC-------CchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 0000000000 012356889999999999999999999999999975
No 205
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.1e-35 Score=311.13 Aligned_cols=255 Identities=24% Similarity=0.360 Sum_probs=204.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
....+|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+.+++.++ |+||+++++++.
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~~~~~~~ 85 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR------HPNTIEYKGCYL 85 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEE
Confidence 34467999999999999999999998899999999986431 22345667777777664 789999999999
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
..+..++||||+.+++.+++..... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|
T Consensus 86 ~~~~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~d 158 (307)
T cd06607 86 REHTAWLVMEYCLGSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLAD 158 (307)
T ss_pred eCCeEEEEHHhhCCCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEee
Confidence 9999999999999988877654322 2889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCCccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 534 LGSSCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 534 FGls~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
||++...... ....+++.|+|||++. ...++.++||||||+++|+|++|..||.+.+.......+.....
T Consensus 159 fg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~------ 231 (307)
T cd06607 159 FGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS------ 231 (307)
T ss_pred cCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC------
Confidence 9998665433 3356788999999985 35688899999999999999999999977654443333210000
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..++. ...+..+.+||.+||..||++||++.+++.||||+..
T Consensus 232 ----------------------------~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 ----------------------------PTLSS--------NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred ----------------------------CCCCc--------hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 00000 0123458899999999999999999999999999753
No 206
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=306.22 Aligned_cols=271 Identities=28% Similarity=0.413 Sum_probs=204.9
Q ss_pred CcEEEE-EEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~-~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+-|++. +.||+|+|+.|--++...+|..||||++.+... ...+..+|++++...+ +|+||++++++|++...+
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhcccceE
Confidence 335544 479999999999999999999999999987543 4567889999998886 588999999999999999
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-cCCCeEEEEecCC
Q 005590 459 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~-~~~~~vkL~DFGl 536 (689)
|+|||-|.|+ |+.-+.... .|++.++.++++.|+.||.|||.+||.||||||+|||... +.-.-|||+||.+
T Consensus 152 YLVfEKm~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEecccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 9999999964 555554332 3999999999999999999999999999999999999864 2345699999987
Q ss_pred cccc----------cCCccccccCccccChhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 005590 537 SCFQ----------TDNLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 537 s~~~----------~~~~~~~~gt~~Y~APE~l~-----~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~ 601 (689)
+... ++...+.+|+..|||||++. ...|+.+.|+||||||+|-||+|.+||.+....+
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d------- 298 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD------- 298 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc-------
Confidence 6431 12344568888999999974 2358999999999999999999999997642211
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
-.|.+++.-...-. .+-+......|.+|+... ...+.+.+|||+.+|..|+..|.++.++++
T Consensus 299 -------CGWdrGe~Cr~CQ~------~LFesIQEGkYeFPdkdW-----ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 299 -------CGWDRGEVCRVCQN------KLFESIQEGKYEFPDKDW-----AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred -------CCccCCCccHHHHH------HHHHHHhccCCcCChhhh-----HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 01111111000000 000011233445554221 123567889999999999999999999999
Q ss_pred CCCCCC
Q 005590 682 HPWLQH 687 (689)
Q Consensus 682 hpwf~~ 687 (689)
|||++.
T Consensus 361 hPw~~~ 366 (463)
T KOG0607|consen 361 HPWVQR 366 (463)
T ss_pred Cccccc
Confidence 999985
No 207
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-34 Score=307.60 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=200.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++++.||+|+||.||++.+..+++.|++|.+.... .....+.+|+.+++.+ .|+||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA------ENPFVVSMFCSFETKR 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC------CCCCeeeeEEEEecCC
Confidence 36899999999999999999999999999999987542 2234555677777765 4689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.++||||+.| +|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg 146 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFG 146 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCC
Confidence 99999999986 6666664322 2888999999999999999999999999999999999984 7889999999
Q ss_pred CcccccCC------------------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 005590 536 SSCFQTDN------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 597 (689)
Q Consensus 536 ls~~~~~~------------------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~ 597 (689)
++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 87531100 011356778999999998889999999999999999999999998776655554
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC--
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-- 675 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-- 675 (689)
.+.....+ .|... ...+..+.+||.+||+.||++||+
T Consensus 227 ~~~~~~~~-----------------------------------~~~~~------~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 227 QVISDDIE-----------------------------------WPEGD------EALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred HHHhcccC-----------------------------------CCCcc------ccCCHHHHHHHHHHhccChhhccCcc
Confidence 43211000 00000 013456889999999999999998
Q ss_pred -HHHHHcCCCCCC
Q 005590 676 -AREALDHPWLQH 687 (689)
Q Consensus 676 -a~ElL~hpwf~~ 687 (689)
+.++|+||||..
T Consensus 266 ~~~~ll~~~~~~~ 278 (305)
T cd05609 266 GAFEVKQHRFFLG 278 (305)
T ss_pred CHHHHHhCccccC
Confidence 899999999964
No 208
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.6e-35 Score=298.66 Aligned_cols=251 Identities=26% Similarity=0.407 Sum_probs=201.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--CC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LE 456 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~--~~ 456 (689)
+|++++.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++.++ |+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK------HPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC------CCccceeeeeeecCCCC
Confidence 589999999999999999999999999999998653 233455667788777774 6799999998764 45
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH-----HCCceeccCCCCcEEEeccCCCeEE
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH-----SLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH-----~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
..+++|||+.+ +|.+++..... ....+++..++.++.||+.||.||| +.+++|+||+|+||+++. ++.++
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~k 150 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVK 150 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEE
Confidence 68999999985 67777654322 2234889999999999999999999 889999999999999984 78999
Q ss_pred EEecCCcccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 531 IIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 531 L~DFGls~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|+|||++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---- 226 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK---- 226 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC----
Confidence 99999987654332 23568899999999998889999999999999999999999998766444333322100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
...+|. ..+..+.+||.+||+.+|++|||+.++|+|||+
T Consensus 227 ------------------------------~~~~~~---------~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 ------------------------------FRRIPY---------RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ------------------------------CCCCcc---------ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 000111 123568899999999999999999999999997
No 209
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.1e-34 Score=298.82 Aligned_cols=252 Identities=29% Similarity=0.450 Sum_probs=201.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
++|++.+.||.|+||.||+|++..+++.+++|++.... .....+.+|+.+++.+ +|+||+++++++.....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~~ 76 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC------RHPNIVAYFGSYLRRDKLW 76 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC------CCCChhceEEEEEeCCEEE
Confidence 68999999999999999999999899999999988643 2345677788877776 4789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
++|||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++.
T Consensus 77 l~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~ 149 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSA 149 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccch
Confidence 99999996 5665554331 23889999999999999999999999999999999999994 7789999999987
Q ss_pred cccCC---ccccccCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~---~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+....-.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~------- 222 (262)
T cd06613 150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP------- 222 (262)
T ss_pred hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-------
Confidence 64432 2335678899999999877 7899999999999999999999999876544433322110000
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.+. ... ....+..+.+||++||..+|.+|||+.+++.|||
T Consensus 223 ----------------------------~~~---~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 223 ----------------------------PPK---LKD-KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ----------------------------Ccc---ccc-hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 000 000 0011345889999999999999999999999999
No 210
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-37 Score=321.22 Aligned_cols=266 Identities=27% Similarity=0.378 Sum_probs=206.2
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHH--HHHHHHhcccCCCCCCceeEEEEEEE-
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDE--IKLLKLVNKNDPADEHHILRLYDYFY- 453 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~E--i~iL~~l~~~~~~~h~~Iv~l~~~f~- 453 (689)
..+++||.++.+||+|||+.||+|.|....+.||+|+-...+.|.+..... ...++..+....++||.||++|++|.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 467899999999999999999999999999999999987665554332211 11333333334457889999999998
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC--CceeccCCCCcEEEecc-CCCeEE
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL--GIIHCDLKPENILIKSY-QRCEIK 530 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~--gIvHrDLKp~NILl~~~-~~~~vk 530 (689)
+.+.+|-|+|||+|+-+++...... .+++++++.|+.||+.||.||... -|||-||||.|||+..+ .-|.||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeE
Confidence 5567899999999987776654333 299999999999999999999987 49999999999998643 347899
Q ss_pred EEecCCcccccCCcc----------ccccCccccChhhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHH-H
Q 005590 531 IIDLGSSCFQTDNLC----------LYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVM-I 595 (689)
Q Consensus 531 L~DFGls~~~~~~~~----------~~~gt~~Y~APE~l~~~----~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~-~ 595 (689)
|+|||++..+.+... ...||.||+|||++.-. .++.++||||+|||+|.++.|+.||..+.... +
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence 999999988654322 25789999999998633 48899999999999999999999998764332 2
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 675 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT 675 (689)
+..- ......+..+|..+. .+.++++||++||++.-+.|+.
T Consensus 694 LqeN--------------------------------TIlkAtEVqFP~KPv-------VsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 694 LQEN--------------------------------TILKATEVQFPPKPV-------VSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred Hhhh--------------------------------chhcceeccCCCCCc-------cCHHHHHHHHHHHHhhhhhhhh
Confidence 2210 001112333444332 3467889999999999999999
Q ss_pred HHHHHcCCCCC
Q 005590 676 AREALDHPWLQ 686 (689)
Q Consensus 676 a~ElL~hpwf~ 686 (689)
..+|..||+|.
T Consensus 735 V~qLA~dpyll 745 (775)
T KOG1151|consen 735 VQQLACDPYLL 745 (775)
T ss_pred HHHHccCcccc
Confidence 99999999984
No 211
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.1e-35 Score=304.88 Aligned_cols=252 Identities=32% Similarity=0.440 Sum_probs=201.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||.|++|.||++.+..+++.+|+|++.... .....+.+|+.+++.+. |+||+++++.+......
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN------SPYIVGFYGAFYNNGDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC------CCchhhhheeeecCCEE
Confidence 36788899999999999999999999999999987652 33456677777777664 78999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++|+||+. ++|.+++.... ..+++..+..++.||+.||.|||+ .|++|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~ 147 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGV 147 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeeccc
Confidence 99999999 57777765432 238899999999999999999999 99999999999999995 77899999998
Q ss_pred cccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHhhcCCCcHHH
Q 005590 537 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-----VVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 537 s~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~-----~~~~l~~i~~~~g~~~~e~ 610 (689)
+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.... ..+.+..+...
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 219 (265)
T cd06605 148 SGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-------- 219 (265)
T ss_pred chhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC--------
Confidence 8654322 122678889999999999999999999999999999999999996542 11111111100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.....+. . ..+..+++||.+||..||++|||+.+++.||||++
T Consensus 220 --------------------------~~~~~~~------~--~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 220 --------------------------PPPRLPS------G--KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred --------------------------CCCCCCh------h--hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 0000110 0 03466889999999999999999999999999974
No 212
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3e-35 Score=308.38 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=199.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|...+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.++..+. +|+||+++++++......
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFREGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecCCcE
Confidence 35667788999999999999999999999999987532 33455667777777664 378999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+++|||+..++.++....... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.++|+|||++
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~ 155 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGIS 155 (288)
T ss_pred EEEEecccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchh
Confidence 999999988766654332111 113389999999999999999999975 9999999999999985 778999999998
Q ss_pred ccccCC--ccccccCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDN--LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~--~~~~~gt~~Y~APE~l~~~---~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
...... .....+++.|+|||++.+. .++.++|+||+||++|+|++|+.||.... .....+.......+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~----- 228 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDP----- 228 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCC-----
Confidence 654332 2234678899999999876 68999999999999999999999997543 11111111100000
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..++.. .....+..+.+||.+||+.||++|||+.++++||||+.
T Consensus 229 --------------------------~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 229 --------------------------PILSNS-----EEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred --------------------------CcCCCc-----CCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 000000 00123567899999999999999999999999999975
No 213
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.8e-35 Score=298.09 Aligned_cols=248 Identities=29% Similarity=0.401 Sum_probs=198.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+|++.+.||+|++|+||+|.+..+++.|++|.+.... .....+.+|+.+++.++ |++|+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ------HPNIVQYLGTEREE 74 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC------CCCchheeeeEecC
Confidence 5788899999999999999998899999999986532 23456677887777664 67999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
...++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.+||+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~ 146 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADF 146 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccC
Confidence 999999999985 6777665321 2788899999999999999999999999999999999984 788999999
Q ss_pred CCcccccCC--ccccccCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~~~~~--~~~~~gt~~Y~APE~l~~~~-~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
|++...... .....++..|+|||.+.... ++.++|+|||||++|+|++|+.||...........+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-------- 218 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-------- 218 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--------
Confidence 988654332 23456788999999998776 8999999999999999999999997654333222221000
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....++ ...++.+.+||++||+.+|.+|||+.++|+||||
T Consensus 219 -------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 -------------------------ELPPIP---------DHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -------------------------cCCCcC---------CCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 000011 1234668899999999999999999999999997
No 214
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-37 Score=305.57 Aligned_cols=282 Identities=25% Similarity=0.459 Sum_probs=224.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~---~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~-- 454 (689)
.+.|.-+.+||+|.||.||+|+...+|+.||+|++-. ...+....++|+++|..+. |+|++.++..+..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk------Henv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc------chhHHHHHHHHhhcc
Confidence 4678888899999999999999999999999997643 2344567789999999886 4567776666542
Q ss_pred ------CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 455 ------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 455 ------~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
...+|+||.+|+.+|.-++.... ..++...++.++.++++||.|+|...|+|||+|+.|+||+. ++.
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~--dgi 162 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK--DGI 162 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC--Cce
Confidence 23589999999998887765332 23999999999999999999999999999999999999994 899
Q ss_pred EEEEecCCcccccC-------CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 005590 529 IKIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 600 (689)
Q Consensus 529 vkL~DFGls~~~~~-------~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~ 600 (689)
+||+|||+++.... ..+..+-|.+|++||.++|. .|+.+.|||..|||+.+|+++.+.|++++....+..|.
T Consensus 163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 99999999865332 12234669999999999875 59999999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCcc--chhhh--hccCCcHHHHHHHHHhcccCCCCCcCH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEH--HLQFSDAFFIDFVRTLLEINPQRRPTA 676 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l~~--~~~~~~~~l~dLI~~mL~~dP~kRpTa 676 (689)
...|.+..+.|+...++.-|-.-+.. .+|+. ..+.. .....+.+..+|+.+||..||.+|+++
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~e-------------Pl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a 309 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELE-------------PLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA 309 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCC-------------CCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch
Confidence 99999999999876654322211000 01110 00000 112346778999999999999999999
Q ss_pred HHHHcCCCCCC
Q 005590 677 REALDHPWLQH 687 (689)
Q Consensus 677 ~ElL~hpwf~~ 687 (689)
+++|.|.||-+
T Consensus 310 d~alnh~~F~k 320 (376)
T KOG0669|consen 310 DQALNHDFFWK 320 (376)
T ss_pred Hhhhchhhhhc
Confidence 99999999954
No 215
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1e-34 Score=307.56 Aligned_cols=258 Identities=21% Similarity=0.270 Sum_probs=194.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPAD 441 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~----------------tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~ 441 (689)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ......+.+|+++++.++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------ 77 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK------ 77 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC------
Confidence 5789999999999999999997532 3457999998764 233456778888887764
Q ss_pred CCceeEEEEEEEeCCeEEEEEEcccc-chHHHHhhhhcc-------------CCCcccCHHHHHHHHHHHHHHHHHHHHC
Q 005590 442 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES-------------GGEAYFTLGRLQVITRQCLEALEYLHSL 507 (689)
Q Consensus 442 h~~Iv~l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~-------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~ 507 (689)
|+||+++++++...+..++||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+.
T Consensus 78 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 78 DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 68999999999999999999999974 777776543211 1112367788999999999999999999
Q ss_pred CceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh
Q 005590 508 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT 582 (689)
Q Consensus 508 gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt 582 (689)
||+||||||+|||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++
T Consensus 158 ~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 158 NFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred CccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999984 7889999999987543221 12344778999999998899999999999999999987
Q ss_pred --CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHH
Q 005590 583 --GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFID 660 (689)
Q Consensus 583 --G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~d 660 (689)
+..||...+..+.+..+...+.. . ........| ...+..+.+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~------------------~---------~~~~~~~~~---------~~~~~~~~~ 279 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRD------------------Q---------GRQVYLFRP---------PPCPQGLYE 279 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhh------------------c---------cccccccCC---------CCCCHHHHH
Confidence 66888776555544433211000 0 000000001 112356889
Q ss_pred HHHHhcccCCCCCcCHHHHHc
Q 005590 661 FVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 661 LI~~mL~~dP~kRpTa~ElL~ 681 (689)
||.+||+.||.+|||+.++.+
T Consensus 280 li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 280 LMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHHHHccCCchhCcCHHHHHH
Confidence 999999999999999999954
No 216
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8e-35 Score=300.32 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=192.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchhh----hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF----FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~----~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
+.||.|+||.||+|.+..+++.||+|+++..... ......|..++.. ..+|+||+++++++...+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-----~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-----QGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-----cCCCCCeeeeeeeEEcCCeEEEEE
Confidence 5689999999999999999999999998754211 1122223222221 236899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|.+++.... .+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||++....
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceecc
Confidence 99985 6766664322 2889999999999999999999999999999999999984 7789999999886543
Q ss_pred CCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 005590 542 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 621 (689)
Q Consensus 542 ~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~ 621 (689)
. .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 149 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 211 (260)
T cd05611 149 E-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN---------------- 211 (260)
T ss_pred c-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC----------------
Confidence 3 23346788999999999888999999999999999999999999876665554443211000
Q ss_pred hccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHHHHcCCCCCC
Q 005590 622 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 687 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~hpwf~~ 687 (689)
.+. . .....+..+.++|.+||+.||++||| +.|+|.||||++
T Consensus 212 -------------------~~~--~---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 212 -------------------WPE--E---VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred -------------------CCC--c---ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 000 0 00123466889999999999999995 579999999976
No 217
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.8e-35 Score=302.41 Aligned_cols=246 Identities=27% Similarity=0.415 Sum_probs=200.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+|++.+.||.|+||.||++.+..+++.||+|++.... .....+.+|+++++.+ +||||+++++.+....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~ 74 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL------NHPFLVNLWYSFQDEEN 74 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC------CCCChHHHHHhhcCCCe
Confidence 5899999999999999999999999999999997542 2345667777777766 47899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+.+... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~ 146 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNI 146 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeeccc
Confidence 9999999986 566665433 23889999999999999999999999999999999999984 78899999998
Q ss_pred cccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV---VMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~---~~~l~~i~~~~g~~~~e~~ 611 (689)
+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+. ........
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------- 215 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE----------- 215 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc-----------
Confidence 8765433 2335678899999999988899999999999999999999999986543 11111110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH--HHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA--REALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa--~ElL~hpwf 685 (689)
......|. ..+..+.++|++||+.||.+||++ +|+++||||
T Consensus 216 ------------------------~~~~~~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 216 ------------------------TADVLYPA---------TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ------------------------cccccCcc---------cCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 00111111 123568899999999999999999 999999998
No 218
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-34 Score=299.18 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=201.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
....|.+.+.||+|+||.||+|.+..+++.||+|++..+......+.+|+++++.+. |+||+++++++......
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPF 77 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC------CCChhheEEEEcCCCCc
Confidence 346799999999999999999999999999999999876555567788888888774 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+. ++|.+++.... ...+++..++.++.|++.||.|||+.|++||||||+||+++. ++.+||+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~ 151 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECN----RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLS 151 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccc
Confidence 99999997 56777765332 123788899999999999999999999999999999999984 788999999998
Q ss_pred ccccCCccc----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~~~~----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
......... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||++....+....+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------- 222 (263)
T cd05052 152 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--------- 222 (263)
T ss_pred cccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---------
Confidence 765433211 223567999999999999999999999999999998 999998776655544432110
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....| ...+..+.+||.+||+.||++|||+.++++.
T Consensus 223 -------------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 223 -------------------------RMERP---------EGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred -------------------------CCCCC---------CCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 00111 1124568899999999999999999999864
No 219
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.3e-35 Score=302.66 Aligned_cols=248 Identities=27% Similarity=0.367 Sum_probs=193.0
Q ss_pred CcEEEEEEe--ccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYL--GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~L--G~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|.+.+.+ |+|+||.||+++++.+++.+|+|++...... . .|+.+...+. +|+||+++++.|...+..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~--~e~~~~~~~~-----~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN--A--IEPMVHQLMK-----DNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc--h--hhHHHHHHhh-----cCCCEEEEEEEEecCCee
Confidence 456666665 9999999999999999999999998754211 1 1232222222 488999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCC-eEEEEecCC
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~-~vkL~DFGl 536 (689)
++||||+. ++|.+++.... .+++..++.++.||+.||.|||+.|++||||||+||+++. ++ .++|+|||+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~ 156 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGL 156 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCcc
Confidence 99999997 57888776432 3899999999999999999999999999999999999985 44 899999999
Q ss_pred cccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH-HHHHHhhcCCCcHHHHhhhh
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI-LARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~-l~~i~~~~g~~~~e~~~~~~ 615 (689)
+...... ....++..|+|||++.+..++.++|+||+||++|+|++|..||........ ...+..
T Consensus 157 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 221 (267)
T PHA03390 157 CKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK-------------- 221 (267)
T ss_pred ceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH--------------
Confidence 8765433 234688999999999998999999999999999999999999975432221 111100
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-HHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-AREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-a~ElL~hpwf~~ 687 (689)
......+ .....++.+.+||.+||+.+|.+||+ .+|+|+||||.+
T Consensus 222 --------------------~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 222 --------------------RQQKKLP-------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred --------------------hhcccCC-------cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0000000 01124567899999999999999996 599999999974
No 220
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.3e-34 Score=297.36 Aligned_cols=250 Identities=25% Similarity=0.397 Sum_probs=201.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|.+.+.||+|+||.||++.++.+|..+|+|.+.... ...+.+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK------HPNIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC------CCChhhhhheeccCCeE
Confidence 5899999999999999999999999999999987542 23456678888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.+++|+||||+||+++. ....++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK-NGMVAKLGDFGIA 149 (257)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC-CCCeEEecccccc
Confidence 999999975 67776653221 23788999999999999999999999999999999999985 2345799999988
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------ 217 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG------------ 217 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc------------
Confidence 7654322 2245788999999998888999999999999999999999999876554443332200
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.... ++ ...+..+.++|.+||..+|++|||+.++++||||
T Consensus 218 ---------------------~~~~-~~---------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 218 ---------------------YFAP-IS---------PNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ---------------------cCCC-CC---------CCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 0000 00 1123568899999999999999999999999997
No 221
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.4e-34 Score=300.46 Aligned_cols=252 Identities=29% Similarity=0.459 Sum_probs=196.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-----------~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
+|.+.+.||.|+||.||+|.+..+|+.+|+|.++.... ..+.+.+|+.+++.+ +|+||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL------DHLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc------CCCCcceEEE
Confidence 58899999999999999999988999999998864211 123455666666666 4789999999
Q ss_pred EEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 451 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
++...+..++||||+.+ +|.+++... ..++...+..++.||+.||.|||+.+++|+||+|+||+++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~ 147 (272)
T cd06629 76 FETTEEYLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGIC 147 (272)
T ss_pred EeccCCceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeE
Confidence 99999999999999975 676666533 23888899999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCC-----ccccccCccccChhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhh
Q 005590 530 KIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 530 kL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~--~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~ 602 (689)
+|+|||++...... .....++..|+|||.+.... ++.++|+||||+++|++++|..||........+..+...
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 99999998754322 12245788999999987654 889999999999999999999999754433322221100
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.....++.. .....+..+.+||.+||..+|++|||+.++|+|
T Consensus 228 ---------------------------------~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 ---------------------------------RSAPPIPPD-----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ---------------------------------ccCCcCCcc-----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000011110 011234678999999999999999999999999
Q ss_pred CCC
Q 005590 683 PWL 685 (689)
Q Consensus 683 pwf 685 (689)
|||
T Consensus 270 ~~~ 272 (272)
T cd06629 270 PFI 272 (272)
T ss_pred CCC
Confidence 997
No 222
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.4e-35 Score=301.36 Aligned_cols=249 Identities=28% Similarity=0.394 Sum_probs=195.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 75 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ------HERIVQYYGCLRD 75 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC------CCCeeeEEEEEEc
Confidence 36889999999999999999999999999999986431 22345667888877774 6799999999875
Q ss_pred --CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 455 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 455 --~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
...++++|||+.+ +|.+.+.... .+++..++.++.||+.||.|||+.+|+|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l 147 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEE
Confidence 3678999999985 6777665322 2788889999999999999999999999999999999984 778999
Q ss_pred EecCCcccccCC------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 532 IDLGSSCFQTDN------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 532 ~DFGls~~~~~~------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
+|||++...... .....++..|+|||.+.+..++.++|+||+||++|+|++|+.||...........+....
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-- 225 (266)
T cd06651 148 GDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-- 225 (266)
T ss_pred ccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC--
Confidence 999998654321 122457889999999999889999999999999999999999997654333332221000
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+| ...++.+.+|| .||..+|++|||++|+++||||
T Consensus 226 -------------------------------~~~~~~---------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~ 264 (266)
T cd06651 226 -------------------------------TNPQLP---------SHISEHARDFL-GCIFVEARHRPSAEELLRHPFA 264 (266)
T ss_pred -------------------------------CCCCCc---------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccc
Confidence 000111 12345677888 5777899999999999999999
Q ss_pred C
Q 005590 686 Q 686 (689)
Q Consensus 686 ~ 686 (689)
+
T Consensus 265 ~ 265 (266)
T cd06651 265 Q 265 (266)
T ss_pred c
Confidence 7
No 223
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-34 Score=299.28 Aligned_cols=243 Identities=28% Similarity=0.441 Sum_probs=196.7
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||.|++|.||++++..+++.+|+|++.... .....+.+|+.+++.++ |+||+++++.+......++||||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN------HPFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC------CCCEeeeeeeEEcCCccEEEEec
Confidence 699999999999999999999999987532 23456677777777664 78999999999999999999999
Q ss_pred cc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+. ++|.+++.... .+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 75 CLGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCcc
Confidence 97 47777765432 2788999999999999999999999999999999999985 788999999998765443
Q ss_pred --ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 005590 544 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA--VVMILARIIGMLGPIDLEMLMQGQEIYK 619 (689)
Q Consensus 544 --~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~--~~~~l~~i~~~~g~~~~e~~~~~~~~~~ 619 (689)
.....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.... .......+...
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------- 209 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG----------------- 209 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc-----------------
Confidence 233567889999999988889999999999999999999999997654 33333332200
Q ss_pred hhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 620 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
.....+|. ..+..+.+||.+||+.||++||+ +.|+++||||+.
T Consensus 210 ----------------~~~~~~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 210 ----------------NGKLEFPN---------YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred ----------------CCCCCCCc---------ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 00011111 11456889999999999999999 999999999974
No 224
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.9e-35 Score=302.90 Aligned_cols=248 Identities=30% Similarity=0.482 Sum_probs=202.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|.+.+.||+|+||.||++++..+++.||+|++.... .....+.+|..+++.+. .|+||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcCCc
Confidence 47999999999999999999999999999999987532 22345667777777664 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+. ++|.+++.... .+++..++.++.||+.||.+||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~ 147 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFG 147 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCc
Confidence 9999999995 67877775432 3899999999999999999999999999999999999984 7789999999
Q ss_pred CcccccCCc-----------------------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH
Q 005590 536 SSCFQTDNL-----------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV 592 (689)
Q Consensus 536 ls~~~~~~~-----------------------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~ 592 (689)
++....... ....++..|+|||++.+..++.++|+||||++++++++|+.||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 886543321 123567889999999988899999999999999999999999987765
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC
Q 005590 593 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 672 (689)
Q Consensus 593 ~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k 672 (689)
...+..+... ...+|. ..++.+.+||++||+.+|++
T Consensus 228 ~~~~~~~~~~-----------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 228 YLTFQKILKL-----------------------------------EYSFPP---------NFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred HHHHHHHHhc-----------------------------------CCCCCC---------ccCHHHHHHHHHHhcCCHhh
Confidence 4444333211 111111 11456889999999999999
Q ss_pred CcCH----HHHHcCCCC
Q 005590 673 RPTA----REALDHPWL 685 (689)
Q Consensus 673 RpTa----~ElL~hpwf 685 (689)
|||+ .++++||||
T Consensus 264 R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 264 RLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCcccCHHHHhcCCCC
Confidence 9999 999999998
No 225
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-34 Score=296.54 Aligned_cols=246 Identities=25% Similarity=0.416 Sum_probs=198.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
+|++.+.||.|+||.||++++..+++.+|+|.++.. ....+...+|+.+++.+ +|+||+++++.+...++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM------KHPNIVAFKESFEADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC------CCCCcceEEEEEEECCEEE
Confidence 589999999999999999999999999999998643 23345666787777766 4789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ ++.+++.... ...+++..+..++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~ 148 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSAR 148 (255)
T ss_pred EEEeeCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcce
Confidence 99999985 6777665322 123788999999999999999999999999999999999984 7789999999987
Q ss_pred cccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... .....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 216 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS------------ 216 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC------------
Confidence 65432 223568889999999999889999999999999999999999998766555444332100
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...+|. ..+..+.+||.+||+.||++|||+.+++.-
T Consensus 217 ----------------------~~~~~~---------~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 ----------------------YKPLPS---------HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----------------------CCCCCc---------ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000111 123457899999999999999999999864
No 226
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.7e-34 Score=302.68 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=189.3
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||.||++.+..+++.+|+|++..... ......++..+++.+.. ..|++|+.+++++...+..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh---CCCCcEeEEEEEEecCCeEEEEEe
Confidence 38999999999999999999999999875421 11233444545554432 358999999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+.+ +|.+++.... .+++..+..++.||+.||.|||+.+|+|+||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 78 LMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (279)
T ss_pred cCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC--CCCEEEccCCcceeccc
Confidence 9986 5655554322 3899999999999999999999999999999999999984 77899999999865433
Q ss_pred C-ccccccCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHH--HHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 543 N-LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM--ILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 543 ~-~~~~~gt~~Y~APE~l~-~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~--~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
. .....+++.|+|||.+. +..++.++|+||+||++|+|++|..||....... .+..+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------------ 211 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------------------ 211 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh------------------
Confidence 2 23356899999999986 4568999999999999999999999996532111 111110
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
......+|. ..+..+.+||++||..||.+|+ |++|+++||||+.
T Consensus 212 ----------------~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 212 ----------------LTVNVELPD---------SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred ----------------hcCCcCCcc---------ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 000011111 1245688999999999999999 6999999999986
No 227
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-34 Score=302.86 Aligned_cols=249 Identities=28% Similarity=0.413 Sum_probs=199.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..|++++.||.|+||.||+|.+..++..+|+|++.... .....+.+|+.+++.+ .|++|+++++++......
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~ 77 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYVTKYYGSYLKGTKL 77 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEECCEE
Confidence 46888899999999999999999999999999987542 3345566777777766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~ 148 (277)
T cd06640 78 WIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccc
Confidence 999999986 666665421 2788889999999999999999999999999999999984 778999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------------ 216 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN------------ 216 (277)
T ss_pred eeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC------------
Confidence 654332 22245788899999999888999999999999999999999999765443322221100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
....++ ...+..+.+||.+||+.+|++||++.++++||||..
T Consensus 217 ----------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06640 217 ----------------------NPPTLT---------GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVK 258 (277)
T ss_pred ----------------------CCCCCc---------hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence 000000 012345789999999999999999999999999975
No 228
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.1e-34 Score=298.38 Aligned_cols=249 Identities=27% Similarity=0.418 Sum_probs=195.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+|++.+.||+|+||.||++++..+++.||||++..+. .....+.+|+.+++.+. |+||+++++++..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~ 75 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL------HERIVQYYGCLRD 75 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC------CCCeeeEEeEecc
Confidence 47999999999999999999999999999999886431 22345667888887774 7899999999876
Q ss_pred C--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 455 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 455 ~--~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
. ..+++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l 147 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKL 147 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEE
Confidence 4 568899999985 6777665322 2778889999999999999999999999999999999984 788999
Q ss_pred EecCCcccccC------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 532 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 532 ~DFGls~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
+|||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|+.||........+.++... +
T Consensus 148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~ 225 (265)
T cd06652 148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ--P 225 (265)
T ss_pred CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcC--C
Confidence 99998865432 122346788999999999888999999999999999999999999765433333222100 0
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+|. ..+..+.++|++|| .+|++||+++|+++|||+
T Consensus 226 -------------------------------~~~~~~~---------~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 226 -------------------------------TNPVLPP---------HVSDHCRDFLKRIF-VEAKLRPSADELLRHTFV 264 (265)
T ss_pred -------------------------------CCCCCch---------hhCHHHHHHHHHHh-cChhhCCCHHHHhcCccc
Confidence 0000111 12345789999999 499999999999999998
Q ss_pred C
Q 005590 686 Q 686 (689)
Q Consensus 686 ~ 686 (689)
.
T Consensus 265 ~ 265 (265)
T cd06652 265 H 265 (265)
T ss_pred C
Confidence 4
No 229
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.2e-34 Score=299.14 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=192.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..+|++.+.||+|+||.||+|.+. ..+..||+|+++... .....+.+|+.+++.+ +||||+++++++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF------DHSNIVRLEGVITR 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEec
Confidence 467999999999999999999764 456789999988643 2234566677777655 47899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.++.++||||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.|++||||||+|||++. ++.++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~d 150 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISG 150 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECC
Confidence 9999999999986 4555554321 23889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCCc--c--ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 534 LGSSCFQTDNL--C--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 534 FGls~~~~~~~--~--~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
||.+....... . ...++..|+|||.+.+..++.++|||||||++|++++ |..||.+.+..+.+..+.....
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---- 226 (266)
T cd05064 151 FRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR---- 226 (266)
T ss_pred CcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----
Confidence 99875532221 1 1234568999999999999999999999999999875 9999988766655544421100
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...| ...+..+.+++.+||+.+|.+|||++++++
T Consensus 227 ------------------------------~~~~---------~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 227 ------------------------------LPAP---------RNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ------------------------------CCCC---------CCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 0011 112355789999999999999999999875
No 230
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-34 Score=300.83 Aligned_cols=253 Identities=28% Similarity=0.453 Sum_probs=202.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.|++.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.+.. ..|++++++++++......+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---SQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---CCCCCeeeEeeeeeeCCEEE
Confidence 478889999999999999999999999999998653 3344567789999998865 35899999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ +|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. .+.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAA 149 (277)
T ss_pred EEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCcee
Confidence 99999986 566655421 3889999999999999999999999999999999999995 7889999999987
Q ss_pred cccCC---ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.........+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------------ 217 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------------ 217 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------------
Confidence 65432 223468889999999875 45789999999999999999999999765433222111000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
....++. ......+.+||++||+.||++|||+.++++||||++.
T Consensus 218 ----------------------~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 218 ----------------------KPPRLED--------NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred ----------------------CCCCCCc--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 0000000 0123568899999999999999999999999999764
No 231
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.2e-34 Score=296.45 Aligned_cols=251 Identities=31% Similarity=0.471 Sum_probs=203.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
++|++.+.||.|++|.||+|++..+++.|++|++.... .....+.+|+.++..++ |+||+++++++......
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE------SPYVVKCYGAFYKEGEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC------CCCeeeEEEEEccCCeE
Confidence 36899999999999999999999999999999987653 23456777888777775 77999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++||||+. ++|.+++... ..+++..+..++.||+.||.|||+ .|++|+||+|+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~ 146 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGI 146 (264)
T ss_pred EEEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCcc
Confidence 99999999 5777776543 238999999999999999999999 99999999999999985 78899999998
Q ss_pred cccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHhhcCCCcHHH
Q 005590 537 SCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA---VVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 537 s~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~---~~~~l~~i~~~~g~~~~e~ 610 (689)
+....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+....+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------- 218 (264)
T cd06623 147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-------- 218 (264)
T ss_pred ceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC--------
Confidence 87654322 13467889999999999889999999999999999999999997653 22222222100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.....+. ...+..+.++|++||..+|++|||+.++++||||+.
T Consensus 219 --------------------------~~~~~~~--------~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 219 --------------------------PPPSLPA--------EEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred --------------------------CCCCCCc--------ccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 0000000 003456889999999999999999999999999975
No 232
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3e-34 Score=295.80 Aligned_cols=249 Identities=32% Similarity=0.501 Sum_probs=199.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~---~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
||++.+.||+|+||.||++.+..+++.+|+|+++.... ....+.+|+.+++.++ |+||+++++.+...+..
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK------HPNLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC------CCChhheeeeEecCCEE
Confidence 69999999999999999999988999999999886533 4567778888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+.+ +|.+++... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~ 146 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHG------RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCA 146 (264)
T ss_pred EEEEecCCCCcHHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999985 676665432 12788899999999999999999999999999999999985 788999999998
Q ss_pred ccccCCcc-------ccccCccccChhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCC
Q 005590 538 CFQTDNLC-------LYVQSRSYRAPEVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPI 606 (689)
Q Consensus 538 ~~~~~~~~-------~~~gt~~Y~APE~l~~~~---~s~~~DIwSLGvil~eLltG~~PF~~~~~-~~~l~~i~~~~g~~ 606 (689)
........ ...+++.|+|||++.+.. ++.++|+||+|+++|+|++|+.||..... ......+.. +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~-- 222 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--G-- 222 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--C--
Confidence 76543211 245688999999998766 88999999999999999999999975422 222111110 0
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
....+|.. ...+..+.+||.+||+.+|++|||+.+++.||||
T Consensus 223 ------------------------------~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 223 ------------------------------HKPPIPDS-------LQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ------------------------------CCCCCCcc-------cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01111111 1124567899999999999999999999999997
No 233
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=301.64 Aligned_cols=288 Identities=32% Similarity=0.542 Sum_probs=233.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
++..||.-+..+|.|+- .|..|.|.-+++.||+|..... .....+..+|+.++..++ |+||++++.+|.-
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~------~~nii~l~n~ftP 86 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN------HKNIISLLNVFTP 86 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc------ccceeeeeeccCc
Confidence 45578999999999999 8999999999999999986542 233467778999888886 5689999999974
Q ss_pred C------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 455 L------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 455 ~------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
. ...|+|||+|..+|...+... +.-..+..|++|+++|++|||+.||+||||||+||++.. ++.
T Consensus 87 ~~~l~~~~e~y~v~e~m~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~ 156 (369)
T KOG0665|consen 87 QKTLEEFQEVYLVMELMDANLCQVILME--------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCT 156 (369)
T ss_pred cccHHHHHhHHHHHHhhhhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhh
Confidence 4 358999999999998887722 667889999999999999999999999999999999995 899
Q ss_pred EEEEecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 529 IKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 529 vkL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
+||.|||+++..... .+.++.|+.|+|||++.+..|...+||||+||++.||++|+..|++.+..+...+++..+|.+
T Consensus 157 lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp 236 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP 236 (369)
T ss_pred eeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence 999999999765443 445788999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhh--hhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLE--HHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
+.....+-+.....+-.+.+.+.. ......+|...-.. +........+++|+.+||..||++|.+++++|+|||
T Consensus 237 d~~F~~qL~~~~r~yv~~~~~y~~----~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 237 DPSFMKQLQPTVRNYVENRPQYQA----ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred CHHHHHHhhHHHHHHhhcChHhhc----cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 999888877765544433222211 11222233211110 111122356899999999999999999999999999
Q ss_pred CC
Q 005590 685 LQ 686 (689)
Q Consensus 685 f~ 686 (689)
++
T Consensus 313 ~~ 314 (369)
T KOG0665|consen 313 IK 314 (369)
T ss_pred ee
Confidence 96
No 234
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2e-34 Score=303.16 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=191.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----CCeE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----LEHL 458 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~----~~~l 458 (689)
..||+|+++.||+|.. +|+.||||+++.... ..+.+.+|+.+++.++ ||||+++++++.+ ...+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID------SNNILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC------CCCEEEEeeeEEecccCCCce
Confidence 3589999999999986 789999999876432 2356668898888875 6799999999877 3578
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
++||||+.+ +|.+++.... .+++.....++.|++.||.|||+. +++||||||+|||++. ++.+||+|||+
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~ 169 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGL 169 (283)
T ss_pred EEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccch
Confidence 999999996 5777765332 278888999999999999999984 9999999999999995 78899999999
Q ss_pred cccccCCccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
+...........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+...-.
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~---------- 239 (283)
T PHA02988 170 EKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN---------- 239 (283)
T ss_pred HhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC----------
Confidence 8876555555678999999999976 6799999999999999999999999988766655544421100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+|. ..+..+.+||.+||+.||++|||+.|+++
T Consensus 240 -----------------------~~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 240 -----------------------SLKLPL---------DCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred -----------------------CCCCCC---------cCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 001110 12456889999999999999999999985
No 235
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-34 Score=303.95 Aligned_cols=264 Identities=24% Similarity=0.327 Sum_probs=201.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
..+|++++.||+|+||+||++++..+|+.||+|++... ......+.+|+++++.++ |+||+++++++.....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~ 77 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR------SPYIVSFYGAFLNENN 77 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC------CCCcceEeeeEecCCE
Confidence 36789999999999999999999999999999988654 233456778888887764 6899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.++||||+.+ +|.+++.... .+++..++.++.|++.||.|||+ .+++|+||||+||+++. ++.++|+|||
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~g 149 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFG 149 (284)
T ss_pred EEEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCC
Confidence 9999999986 5555544321 38899999999999999999997 59999999999999984 7889999999
Q ss_pred CcccccC-CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 536 SSCFQTD-NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 536 ls~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
++..... ......++..|+|||++.+..++.++|+|||||++|+|++|..||............ +....
T Consensus 150 l~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~-------~~~~~--- 219 (284)
T cd06620 150 VSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD-------PMGIL--- 219 (284)
T ss_pred cccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh-------hhHHH---
Confidence 8765432 223357899999999998888999999999999999999999999765432110000 00000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
....... ......++. ...+..+.+||.+||+.||.+|||+.|+++||||.+.
T Consensus 220 -~~~~~~~------------~~~~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 220 -DLLQQIV------------QEPPPRLPS--------SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred -HHHHHHh------------hccCCCCCc--------hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0000000 000000110 0123568899999999999999999999999999764
No 236
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.6e-34 Score=316.24 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=195.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg-----~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
.-.++|++.+.||+|+||.||+|++...| ..||+|+++.. ......+.+|+.+++.+. .|+||+++++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~ 109 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLG 109 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEee
Confidence 34568999999999999999999865443 57999999753 223456778888888773 3789999999
Q ss_pred EEEeCCeEEEEEEccc-cchHHHHhhhhc---------------------------------------------------
Q 005590 451 YFYHLEHLFIVCELLR-ANLYEFQKFNQE--------------------------------------------------- 478 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~-g~L~~l~~~~~~--------------------------------------------------- 478 (689)
++......++||||+. |+|.+++.....
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 9999999999999998 477777643221
Q ss_pred -------------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCcc
Q 005590 479 -------------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 545 (689)
Q Consensus 479 -------------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~ 545 (689)
......+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcc
Confidence 011124788889999999999999999999999999999999984 78899999999875432211
Q ss_pred -----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 005590 546 -----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 619 (689)
Q Consensus 546 -----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~ 619 (689)
...+++.|+|||++.+..++.++|||||||++|+|++ |..||........+..+...
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~----------------- 330 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR----------------- 330 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc-----------------
Confidence 1224567999999998899999999999999999997 99999765433322222100
Q ss_pred hhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 620 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......|. ..++++.++|.+||+.||.+|||+.++++
T Consensus 331 ----------------~~~~~~~~---------~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 331 ----------------GYQMSRPD---------FAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----------------ccCccCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00001111 12466899999999999999999999986
No 237
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.4e-34 Score=294.43 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=196.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
++|++.+.||+|+||.||++... .+..+|+|.+.........+.+|+.+++.++ ||||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS------HPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC------CCCceeEEEEEccCCCEEE
Confidence 56899999999999999999864 4568999998765544567788999998874 6799999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+. ++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~ 149 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccc
Confidence 999998 56777665322 12788999999999999999999999999999999999984 78899999998875
Q ss_pred ccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 540 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 540 ~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ...++..|+|||++.+..++.++|+||||+++|+|++ |+.||...+..+.+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~---------- 219 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR---------- 219 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC----------
Confidence 432211 1234567999999998889999999999999999999 9999988766665555431100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...|. ..+..+.+||.+||+.+|++|||+.++++
T Consensus 220 ------------------------~~~~~---------~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 ------------------------LYRPK---------LASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ------------------------CCCCC---------CCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00111 12346789999999999999999999986
No 238
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=7.1e-36 Score=290.79 Aligned_cols=286 Identities=27% Similarity=0.453 Sum_probs=220.2
Q ss_pred CCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005590 369 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 448 (689)
Q Consensus 369 ~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l 448 (689)
..+.+.++. .++|+|.+++|+|-|+.|+.|.+..+.++++||+++.-+ ...+.+|++||+.|. ++|||+++
T Consensus 28 E~~~i~wg~--~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~-----gg~NIi~L 98 (338)
T KOG0668|consen 28 ESLVIDWGN--QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLR-----GGPNIIKL 98 (338)
T ss_pred hheeeeccc--cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhcc-----CCCCeeeh
Confidence 334444443 478999999999999999999999999999999998643 368899999999987 47899999
Q ss_pred EEEEEeCC--eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC
Q 005590 449 YDYFYHLE--HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 526 (689)
Q Consensus 449 ~~~f~~~~--~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~ 526 (689)
+++..+.. ...+|+||++..-. ....+. ++...++.++.|++.||.|+|++||+|||+||.|++|+. ..
T Consensus 99 ~DiV~Dp~SktpaLiFE~v~n~Df--k~ly~t------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh-~~ 169 (338)
T KOG0668|consen 99 LDIVKDPESKTPSLIFEYVNNTDF--KQLYPT------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH-EL 169 (338)
T ss_pred hhhhcCccccCchhHhhhhccccH--HHHhhh------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech-hh
Confidence 99998664 57899999986422 222221 778889999999999999999999999999999999996 56
Q ss_pred CeEEEEecCCcccccCCc--cccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCC-CCChHHHHHHHHHhh
Q 005590 527 CEIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLF-PNDAVVMILARIIGM 602 (689)
Q Consensus 527 ~~vkL~DFGls~~~~~~~--~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF-~~~~~~~~l~~i~~~ 602 (689)
-.++|+|||+|.+..... ...+.+..|.-||.+.. +.|+...|+|||||+|..|+..+-|| .+.+..+++-+|.++
T Consensus 170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 689999999999876543 33567888999999875 45899999999999999999988776 678889999999999
Q ss_pred cCCCcHHHHhhhhhhhhhhhcc-------ccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKE-------YDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 675 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT 675 (689)
+|.... ..|+.+. .......-....|..-++. .......+++.|||.++|..|.++|+|
T Consensus 250 LGt~el---------~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~-----~n~hl~~peaiDlldklLrYDHqeRlT 315 (338)
T KOG0668|consen 250 LGTDEL---------YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINS-----ENQHLVSPEAIDLLDKLLRYDHQERLT 315 (338)
T ss_pred hChHHH---------HHHHHHHccCCChhHhhHhhccccccHHHhCCc-----cccccCChHHHHHHHHHHhhccccccc
Confidence 985332 2222211 1000000111111111111 111123578999999999999999999
Q ss_pred HHHHHcCCCCC
Q 005590 676 AREALDHPWLQ 686 (689)
Q Consensus 676 a~ElL~hpwf~ 686 (689)
|.|++.||||.
T Consensus 316 akEam~HpyF~ 326 (338)
T KOG0668|consen 316 AKEAMAHPYFA 326 (338)
T ss_pred hHHHhcCchHH
Confidence 99999999996
No 239
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.9e-34 Score=291.81 Aligned_cols=251 Identities=29% Similarity=0.439 Sum_probs=205.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|.+.+.||.|+||.||++.+..+++.+++|++.... .....+.+|+++++.++ |+|++++++.+......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN------HPNIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC------CCChhheEEEEecCCEE
Confidence 5899999999999999999999899999999987642 34456777888887775 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+++ +|.+.+..... ....+++..+..++.||+.||.+||+.|++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~ 150 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS--NGLVKLGDFGIS 150 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC--CCcEEECCccce
Confidence 999999985 67776654321 1234899999999999999999999999999999999999984 788999999998
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....+++.|+|||.+.+..++.++|+||+|+++++|++|..||...........+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 220 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY---------- 220 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC----------
Confidence 765443 2234678899999999988899999999999999999999999987665544444321100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
..+|. ..+..+.++|++||..+|++|||+.++|+||||
T Consensus 221 ------------------------~~~~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ------------------------PPIPS---------QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ------------------------CCCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00111 123568899999999999999999999999997
No 240
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=8.4e-35 Score=307.13 Aligned_cols=251 Identities=27% Similarity=0.446 Sum_probs=199.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
+.|.....||+|+||.||++.+..++..||||.+.... .....+.+|+.+++.+ .|+||+++++.+...++.+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l------~h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY------HHENVVDMYNSYLVGDELW 95 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC------CCCcHHHHHHheecCCeEE
Confidence 44555677999999999999999999999999986532 2334566777777766 4789999999999999999
Q ss_pred EEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.++ |.+++. .. .+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++.
T Consensus 96 lv~e~~~~~~L~~~~~-~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~ 166 (292)
T cd06658 96 VVMEFLEGGALTDIVT-HT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCA 166 (292)
T ss_pred EEEeCCCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchh
Confidence 999999864 555442 11 2788999999999999999999999999999999999984 6789999999886
Q ss_pred cccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+....+..+...+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~---------- 236 (292)
T cd06658 167 QVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP---------- 236 (292)
T ss_pred hcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC----------
Confidence 54322 22356889999999999888999999999999999999999999876554443333211100
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.++. ....+..+.+||.+||..||.+|||+.++++||||..
T Consensus 237 ------------------------~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 237 ------------------------RVKD-------SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred ------------------------cccc-------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 0000 0112456889999999999999999999999999975
No 241
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.4e-34 Score=299.61 Aligned_cols=260 Identities=20% Similarity=0.289 Sum_probs=199.3
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
++..++|++.+.||+|+||.||+|.++. .+..||+|.+..... ....+.+|+.+++.+ +|+||++++
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~ 75 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF------TCHHVVRLL 75 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC------CCCCeeeEE
Confidence 3456899999999999999999997542 355899998865432 223445666666655 478999999
Q ss_pred EEEEeCCeEEEEEEccc-cchHHHHhhhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc
Q 005590 450 DYFYHLEHLFIVCELLR-ANLYEFQKFNQES----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 524 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~----~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~ 524 (689)
+++......++||||+. ++|.+++...... .....++...+..++.||+.||.|||+.+|+||||||+||+++.
T Consensus 76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~- 154 (288)
T cd05061 76 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH- 154 (288)
T ss_pred EEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC-
Confidence 99999999999999997 5788887643221 11233567788999999999999999999999999999999984
Q ss_pred CCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHH
Q 005590 525 QRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 598 (689)
Q Consensus 525 ~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~ 598 (689)
++.++|+|||+++...... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+....
T Consensus 155 -~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (288)
T cd05061 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 233 (288)
T ss_pred -CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 7889999999987543211 11234667999999998899999999999999999998 7899987665554443
Q ss_pred HHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHH
Q 005590 599 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 678 (689)
Q Consensus 599 i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~E 678 (689)
+.... ....+. ..++.+.++|++||+.||++|||+.+
T Consensus 234 ~~~~~----------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~ 270 (288)
T cd05061 234 VMDGG----------------------------------YLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLE 270 (288)
T ss_pred HHcCC----------------------------------CCCCCC---------CCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 32100 000010 12356889999999999999999999
Q ss_pred HHc------CCCCCC
Q 005590 679 ALD------HPWLQH 687 (689)
Q Consensus 679 lL~------hpwf~~ 687 (689)
+++ ||||+.
T Consensus 271 ll~~l~~~~~~~~~~ 285 (288)
T cd05061 271 IVNLLKDDLHPSFPE 285 (288)
T ss_pred HHHHHHhhcCCCCCC
Confidence 987 999975
No 242
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.9e-34 Score=300.53 Aligned_cols=245 Identities=24% Similarity=0.380 Sum_probs=190.0
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||.||+|++..+++.||+|++..... .......|..+++.++. ..|++|+++++++...+..++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence 37999999999999999999999999875321 11223445555555543 368999999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+.| +|..++... ..+++..++.++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||++.....
T Consensus 78 ~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 78 LMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (278)
T ss_pred cCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCc
Confidence 9986 455544322 23899999999999999999999999999999999999985 77899999999865432
Q ss_pred -CccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHH---HHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 543 -NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVV---MILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 543 -~~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~---~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
......++..|+|||++.+. .++.++|+||+||++|+|++|+.||...... .....+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 212 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----------------- 212 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-----------------
Confidence 23345789999999999754 6899999999999999999999999764211 1111000
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
.....+|. ..+..+.++|.+||..+|.+|| ++.++++||||..
T Consensus 213 ------------------~~~~~~~~---------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 213 ------------------TMAVELPD---------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred ------------------ccCCCCCC---------cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 00111111 1245688999999999999999 9999999999975
No 243
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.2e-34 Score=288.97 Aligned_cols=249 Identities=33% Similarity=0.527 Sum_probs=203.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
+|.+.+.||+|++|.||++.+..+++.+++|++..... ....+.+|+.+++.++ |++|+++++.+......++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK------HPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC------CCCEeEEEEEEecCCeEEE
Confidence 48889999999999999999988999999999976543 4567778888887775 6799999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
++||+. ++|.+++.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~ 147 (253)
T cd05122 75 VMEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS--DGEVKLIDFGLSAQ 147 (253)
T ss_pred EEecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc--CCeEEEeecccccc
Confidence 999999 56776665432 23899999999999999999999999999999999999985 78899999999877
Q ss_pred ccCCc--cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 540 QTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 540 ~~~~~--~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
..... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------------- 212 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--------------- 212 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc---------------
Confidence 65443 4567888999999999888999999999999999999999999776433333222100
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
.....+.. ...+..+.++|.+||+.||++|||+.++|+|||
T Consensus 213 -------------------~~~~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 213 -------------------GPPGLRNP-------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -------------------CCCCcCcc-------cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00000000 011356889999999999999999999999999
No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.4e-34 Score=306.21 Aligned_cols=250 Identities=26% Similarity=0.449 Sum_probs=197.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
|.....||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++.+...+..++|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY------QHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC------CCCchhhhhhheeeCCeEEEE
Confidence 334457999999999999999899999999986532 2234566677766655 478999999999999999999
Q ss_pred EEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+.++ |..++.. ..+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++...
T Consensus 97 ~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~ 167 (297)
T cd06659 97 MEFLQGGALTDIVSQ-------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQI 167 (297)
T ss_pred EecCCCCCHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhc
Confidence 9999864 5444321 12789999999999999999999999999999999999984 788999999988654
Q ss_pred cCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 541 TDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 541 ~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
... .....++..|+|||++.+..++.++|+|||||++|+|++|..||......+.+..+.....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------- 234 (297)
T cd06659 168 SKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP------------- 234 (297)
T ss_pred ccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC-------------
Confidence 322 2235688999999999988899999999999999999999999977655544433321000
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
+. .......+..+.++|++||+.+|.+||++.++++||||.+.
T Consensus 235 ------------------------~~----~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 235 ------------------------PK----LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred ------------------------CC----ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 00 00001224568899999999999999999999999999875
No 245
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=344.06 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=212.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
-.++|.|+++||+|+||.|.+++++.+++.||+|++.+- ......+..|-.+|..-+ .+-|++++..|++
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n------s~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN------SEWIVQLHYAFQD 146 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC------cHHHHHHHHHhcC
Confidence 357899999999999999999999999999999999762 233456667777776654 3589999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
..++|+||||+.| +|+.++.... .+++..++.++..|+-||.-||+.|+|||||||+||||+. .|+|||+|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLAD 218 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLAD 218 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeecc
Confidence 9999999999985 6888776543 2899999999999999999999999999999999999995 89999999
Q ss_pred cCCcccccCC----ccccccCccccChhhhc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 534 LGSSCFQTDN----LCLYVQSRSYRAPEVII----G-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 534 FGls~~~~~~----~~~~~gt~~Y~APE~l~----~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
||.+...... ....+|||.|.+||++. + +.|+...|+|||||++|||+.|..||..++..+.+.+|+..
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h-- 296 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH-- 296 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch--
Confidence 9988665532 23468999999999996 2 45899999999999999999999999999999999998722
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHHHHc
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALD 681 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~ 681 (689)
+-...+|... ..++++++||++++ -+|+.|.. ++++-.
T Consensus 297 -------------------------------k~~l~FP~~~-------~VSeeakdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 297 -------------------------------KESLSFPDET-------DVSEEAKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred -------------------------------hhhcCCCccc-------ccCHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence 1123344221 14567899999988 47889999 999999
Q ss_pred CCCCCC
Q 005590 682 HPWLQH 687 (689)
Q Consensus 682 hpwf~~ 687 (689)
||||.+
T Consensus 338 HpFF~g 343 (1317)
T KOG0612|consen 338 HPFFEG 343 (1317)
T ss_pred CccccC
Confidence 999975
No 246
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=323.22 Aligned_cols=248 Identities=29% Similarity=0.419 Sum_probs=205.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+.+.|.+...+|.|+|+.|..+.+..+++..++|++.+.. ....+|+.++.... +|+||+++.+++.+..+.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~-----~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR-----DHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc-----CCCcceeecceecCCcee
Confidence 4577999999999999999999999999999999998763 34556777777665 478999999999999999
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
|+|||++.|. +++-+.... .....+..|+.||+.|+.|||.+|++||||||+|||+. +..++++|+|||.+
T Consensus 392 ~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~-~~~g~lrltyFG~a 463 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD-GSAGHLRLTYFGFW 463 (612)
T ss_pred eeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec-CCCCcEEEEEechh
Confidence 9999999975 444333222 22267788999999999999999999999999999996 35889999999999
Q ss_pred ccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH-HHHHHHHhhcCCCcHHHHhhhhh
Q 005590 538 CFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV-MILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 538 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~-~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
+.......+.+-|..|.|||++....|+.++||||||++||+||+|+.||...... ++..+| +.++..
T Consensus 464 ~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s------- 532 (612)
T KOG0603|consen 464 SELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS------- 532 (612)
T ss_pred hhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccc-------
Confidence 98887766667889999999999999999999999999999999999999765444 332222 221110
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC-CCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL-QHP 688 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf-~~~ 688 (689)
...+..+++||+.||+.||.+|+++.+++.|||| +++
T Consensus 533 -----------------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~ 570 (612)
T KOG0603|consen 533 -----------------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHP 570 (612)
T ss_pred -----------------------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCC
Confidence 2345678999999999999999999999999999 554
No 247
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.3e-34 Score=300.45 Aligned_cols=247 Identities=27% Similarity=0.346 Sum_probs=193.2
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||+|+||+||+|.+..+|+.||+|++.... .....+..|+++++.++ |+||+++++++...+..++||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS------SRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC------CCCEeeeeeEEecCCeEEEEEec
Confidence 699999999999999999999999987532 22334567888887774 68999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|.+++..... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||.+......
T Consensus 75 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 75 MNGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccC
Confidence 985 67666653322 23889999999999999999999999999999999999984 778999999988754322
Q ss_pred --ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 005590 544 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 621 (689)
Q Consensus 544 --~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~ 621 (689)
.....++..|+|||++.+..++.++|+|||||++|+|++|+.||...........+....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------ 210 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT------------------ 210 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc------------------
Confidence 223456788999999998889999999999999999999999997653311111111000
Q ss_pred hccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHcCCCCCC
Q 005590 622 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 687 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~hpwf~~ 687 (689)
.......+ ...++.+.+||++||+.||.+|| ++.++++||||..
T Consensus 211 -------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 211 -------------LEMAVEYP---------DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred -------------ccccccCC---------ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 00000111 11246688999999999999999 9999999999964
No 248
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=322.37 Aligned_cols=244 Identities=28% Similarity=0.432 Sum_probs=196.0
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEccc
Q 005590 388 YLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 466 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~ 466 (689)
+||+|.||+||-|+|..+....|||-++.. .....-+..|+.+.+.|+ |.|||++++.+...+++-|.||-+.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr------HkNIVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR------HKNIVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh------hHhHHHHhhccCCCCeEEEEeecCC
Confidence 599999999999999999999999988753 334455667888888886 4589999999999999999999998
Q ss_pred c-chHHHHhhhhccCCCccc--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc--
Q 005590 467 A-NLYEFQKFNQESGGEAYF--TLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-- 541 (689)
Q Consensus 467 g-~L~~l~~~~~~~~~~~~l--s~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~-- 541 (689)
| +|.++++.. . .++ .+..+..+.+||++||.|||++.|||||||-+||||+. -.|.+||+|||.++...
T Consensus 656 GGSLSsLLrsk-W----GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 656 GGSLSSLLRSK-W----GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred CCcHHHHHHhc-c----CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-ccceEEecccccchhhccC
Confidence 6 555555422 1 124 77889999999999999999999999999999999986 46899999999987654
Q ss_pred -CCccccccCccccChhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHH--HHHHhhcCCCcHHHHhhhh
Q 005590 542 -DNLCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMIL--ARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 542 -~~~~~~~gt~~Y~APE~l~~~--~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l--~~i~~~~g~~~~e~~~~~~ 615 (689)
+...++.||..|||||++-.+ +|+.++|||||||++.||.||++||..- ++..-+ --|.++-+|
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~---------- 799 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPP---------- 799 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCC----------
Confidence 334458899999999999754 4999999999999999999999999532 111111 112222222
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+|.. .+.+++.||.+|+.+||.+||+|.++|+.||++.
T Consensus 800 -------------------------iPee---------lsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 800 -------------------------IPEE---------LSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred -------------------------CcHH---------HHHHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 2221 2356789999999999999999999999999985
No 249
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3e-34 Score=314.15 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=195.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.++|++.+.||+|+||.||+|++ ..++..||||+++... .....+.+|+.+++.+. .||||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence 46899999999999999999974 3457789999987532 23456778999988874 378999999999
Q ss_pred EeCCeEEEEEEccc-cchHHHHhhhhcc----------------------------------------------------
Q 005590 453 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 479 (689)
Q Consensus 453 ~~~~~l~lVmEy~~-g~L~~l~~~~~~~---------------------------------------------------- 479 (689)
......++||||+. |+|.+++......
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999998 4777776532210
Q ss_pred -----------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 480 -----------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 480 -----------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
.....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccC
Confidence 01124778889999999999999999999999999999999984 77899999999876543
Q ss_pred Ccc-----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 543 NLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 543 ~~~-----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
... ...++..|+|||++.+..++.++|||||||++|+|++ |..||........+.+++
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~---------------- 330 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMI---------------- 330 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHH----------------
Confidence 221 1234567999999999999999999999999999998 899997643322221111
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.. ......| ...+.++.+||.+||+.||++|||+.|+++.
T Consensus 331 -----~~------------~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 331 -----KE------------GYRMLSP---------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -----Hh------------CccCCCC---------CCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 00 0000111 1124568899999999999999999999864
No 250
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.3e-34 Score=293.83 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=198.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
-.++|++.++||+|+||.||+|.+. .+..||+|.+.........+.+|+.+++.++ |+||+++++.+...+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ------HDKLVRLYAVVTKEEPI 76 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCCCc
Confidence 3478999999999999999999864 5678999998765555567788888888774 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.+++|+||||+||+++. ++.++|+|||++
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~ 150 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLA 150 (261)
T ss_pred EEEEecCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccc
Confidence 99999997 57877765432 123788899999999999999999999999999999999984 788999999998
Q ss_pred ccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 538 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 538 ~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
........ ...++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--------- 221 (261)
T cd05072 151 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY--------- 221 (261)
T ss_pred eecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---------
Confidence 76543221 1234567999999998889999999999999999998 999998766555444432110
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..|.. ...+..+.+||.+||..+|++|||++++++
T Consensus 222 ---------------------------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 ---------------------------RMPRM-------ENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ---------------------------CCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00100 112356889999999999999999999875
No 251
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.7e-34 Score=299.34 Aligned_cols=250 Identities=22% Similarity=0.252 Sum_probs=198.3
Q ss_pred CcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~-----~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
++|.+.+.||+|+||.||+|.+. .+++.||+|+++.... ....+.+|+++++.+. |+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ------HENIVKFYGVCT 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC------CCCchheeeEEe
Confidence 57899999999999999999874 3467899999876432 3467788888888774 679999999999
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhc--------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQE--------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 524 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~--------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~ 524 (689)
.....++||||+.+ +|.+++..... ......+++..+..++.||+.||.|||+.|++||||||+||+++.
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~- 157 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY- 157 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC-
Confidence 99999999999985 67777654321 122334788999999999999999999999999999999999985
Q ss_pred CCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHH
Q 005590 525 QRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 598 (689)
Q Consensus 525 ~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~ 598 (689)
++.++|+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....
T Consensus 158 -~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 158 -DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred -CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 789999999998653221 122345678999999999999999999999999999998 9999977665554444
Q ss_pred HHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHH
Q 005590 599 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 678 (689)
Q Consensus 599 i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~E 678 (689)
+.....+ ..+ ...+..+.+||++||+.||++|||+.|
T Consensus 237 ~~~~~~~----------------------------------~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~e 273 (280)
T cd05049 237 ITQGRLL----------------------------------QRP---------RTCPSEVYDIMLGCWKRDPQQRINIKD 273 (280)
T ss_pred HHcCCcC----------------------------------CCC---------CCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 3210000 001 112356889999999999999999999
Q ss_pred HHc
Q 005590 679 ALD 681 (689)
Q Consensus 679 lL~ 681 (689)
+++
T Consensus 274 il~ 276 (280)
T cd05049 274 IHE 276 (280)
T ss_pred HHH
Confidence 985
No 252
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.3e-34 Score=301.53 Aligned_cols=255 Identities=28% Similarity=0.391 Sum_probs=198.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.++|++.+.||+|++|.||+|.+..+++.||||+++... ........|+.++.... +|+||+++++++.....
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVKCYGYFITDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-----CCCchHhhheeeecCCe
Confidence 367999999999999999999998889999999997532 22234455555554432 58899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+.+.+++..... .+++..+..++.||+.||.|||+ .||+||||+|+||+++. ++.++|+|||+
T Consensus 89 ~~~v~e~~~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~--~~~~kL~dfg~ 161 (296)
T cd06618 89 VFICMELMSTCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA--SGNVKLCDFGI 161 (296)
T ss_pred EEEEeeccCcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC--CCCEEECcccc
Confidence 999999998877776654322 38889999999999999999997 59999999999999984 78899999999
Q ss_pred cccccCC--ccccccCccccChhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCCcHH
Q 005590 537 SCFQTDN--LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLE 609 (689)
Q Consensus 537 s~~~~~~--~~~~~gt~~Y~APE~l~~~~----~s~~~DIwSLGvil~eLltG~~PF~~~~~-~~~l~~i~~~~g~~~~e 609 (689)
+...... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||..... .+.+..+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------ 235 (296)
T cd06618 162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE------ 235 (296)
T ss_pred chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC------
Confidence 8764332 22235678899999987653 78899999999999999999999975322 22222221000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
....+.. ...+..+.+||.+||..||++|||+.++++||||+.
T Consensus 236 ----------------------------~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 236 ----------------------------PPSLPPN-------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred ----------------------------CCCCCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 0001100 023456889999999999999999999999999975
No 253
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.1e-34 Score=293.71 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=197.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||+|++..+++.||||.+... ......+.+|+.+++.++ ||||+++++++...+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN------HPNVIKYLDSFIEDN 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC------CcceeeeeeeEEECC
Confidence 5799999999999999999999999999999987542 233345677888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+.+ +|.+++..... ....+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~--~~~~~l~d~g 151 (267)
T cd08228 76 ELNIVLELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC--CCCEEECccc
Confidence 99999999995 67766654322 1233788999999999999999999999999999999999985 7789999999
Q ss_pred CcccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~--~~~l~~i~~~~g~~~~e~ 610 (689)
++....... ....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||..... ......+. ..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~----- 225 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDY----- 225 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCC-----
Confidence 887654322 234678899999999988899999999999999999999999965422 22222211 0000
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
|... ....+..+.+||.+||+.+|++|||+.++++.
T Consensus 226 -------------------------------~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 226 -------------------------------PPLP-----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -------------------------------CCCC-----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 0000 00123568899999999999999999999864
No 254
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=288.86 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=197.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
++||+|.+.||.|||+-|+++++..+++.||+|.+.... ...+..++|++..++++ ||||++++++....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~------s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN------SPNVLRLVDHQLREEKD 93 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC------CcchHHHHHHHHHhhcc
Confidence 479999999999999999999999999999999887643 55677778888887775 57899988876533
Q ss_pred --CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEeccCCCeEE
Q 005590 456 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 456 --~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g--IvHrDLKp~NILl~~~~~~~vk 530 (689)
...||+++|.. |+|.+.+......+. .+++.++..|+.+|++||++||+.. ++||||||.|||+.. .+.++
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~--~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~v 169 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGN--FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPV 169 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCC--ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceE
Confidence 35899999987 679998876655433 4999999999999999999999998 999999999999984 78999
Q ss_pred EEecCCcccccCCcc------------ccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 005590 531 IIDLGSSCFQTDNLC------------LYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 595 (689)
Q Consensus 531 L~DFGls~~~~~~~~------------~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~ 595 (689)
|+|||.++...-... ...-|..|+|||.+. +...+.++|||||||+||.|+.|..||..
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------ 243 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------ 243 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------
Confidence 999999865322111 123478899999985 45578999999999999999999999942
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 675 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT 675 (689)
+.. ++....- ......+.+|.... .++.+.+||..||+.||.+||+
T Consensus 244 ---~~~-----------~GgSlaL-------------Av~n~q~s~P~~~~-------yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 244 ---IYQ-----------QGGSLAL-------------AVQNAQISIPNSSR-------YSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred ---Hhh-----------cCCeEEE-------------eeeccccccCCCCC-------ccHHHHHHHHHHhcCCcccCCC
Confidence 111 1111100 00112334444333 3567899999999999999999
Q ss_pred HHHHHcC
Q 005590 676 AREALDH 682 (689)
Q Consensus 676 a~ElL~h 682 (689)
+.+++.+
T Consensus 290 i~~ll~~ 296 (302)
T KOG2345|consen 290 IPELLSK 296 (302)
T ss_pred HHHHHHH
Confidence 9999864
No 255
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7e-34 Score=296.62 Aligned_cols=255 Identities=18% Similarity=0.263 Sum_probs=196.3
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
++..++|++.+.||+|+||+||+|.+.. ++..||+|++.... .....+.+|+.+++.+ +|+||++++
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv~~~ 75 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCHHVVRLL 75 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCeeeEE
Confidence 4567899999999999999999998642 45679999986432 2234566777777765 478999999
Q ss_pred EEEEeCCeEEEEEEcccc-chHHHHhhhhccC----CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc
Q 005590 450 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 524 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~----~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~ 524 (689)
+++......++||||+.+ +|.+++....... ....++...+..++.|++.||.|||+.|++|+||||+||+++.
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~- 154 (277)
T cd05062 76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE- 154 (277)
T ss_pred EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC-
Confidence 999999999999999984 6777765322110 1223677888999999999999999999999999999999994
Q ss_pred CCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHH
Q 005590 525 QRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 598 (689)
Q Consensus 525 ~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~ 598 (689)
++.++|+|||++....... ....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+.+..
T Consensus 155 -~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred -CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 7889999999986543221 12244678999999999899999999999999999999 7899987766554443
Q ss_pred HHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHH
Q 005590 599 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 678 (689)
Q Consensus 599 i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~E 678 (689)
+..... ..++ ...+..+.+||.+||+.||++|||+.|
T Consensus 234 ~~~~~~----------------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~e 270 (277)
T cd05062 234 VMEGGL----------------------------------LDKP---------DNCPDMLFELMRMCWQYNPKMRPSFLE 270 (277)
T ss_pred HHcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 321000 0011 112356889999999999999999999
Q ss_pred HHcC
Q 005590 679 ALDH 682 (689)
Q Consensus 679 lL~h 682 (689)
++++
T Consensus 271 ~l~~ 274 (277)
T cd05062 271 IISS 274 (277)
T ss_pred HHHH
Confidence 9875
No 256
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.9e-34 Score=298.00 Aligned_cols=249 Identities=29% Similarity=0.404 Sum_probs=198.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
-|++.+.||.|+||.||++.+..+++.+|||++.... .....+.+|+.+++.+ .|+||+++++++......+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYVTKYYGSYLKDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc------CCCCEeEEEEEEEeCCeEE
Confidence 3778899999999999999998899999999976432 2334566677777766 4789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ +|..++.. ..++...+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAG 149 (277)
T ss_pred EEEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccce
Confidence 99999986 56655532 12789999999999999999999999999999999999984 7789999999886
Q ss_pred cccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 539 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 539 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------- 216 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN------------- 216 (277)
T ss_pred ecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-------------
Confidence 54332 12246788899999998888999999999999999999999999765443333222100
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
....++ ...+..+.++|.+||+.+|.+||++.++++||||.+.
T Consensus 217 ---------------------~~~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 217 ---------------------NPPTLE---------GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ---------------------CCCCCC---------cccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 000000 1234568899999999999999999999999999764
No 257
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9.6e-34 Score=302.01 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=200.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
+.|...+.||+|+||+||+|++..+++.|++|++.... .....+.+|+.+++.++ |+|++++++++....
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 94 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK------HPNTIEYKGCYLKEH 94 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC------CCCCccEEEEEEeCC
Confidence 34777788999999999999999999999999986432 22345667777777664 789999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 457 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 457 ~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
..++||||+.+++.+++.... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||+
T Consensus 95 ~~~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~ 167 (313)
T cd06633 95 TAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 167 (313)
T ss_pred EEEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCC
Confidence 999999999998887765432 12788999999999999999999999999999999999984 77899999998
Q ss_pred cccccCCccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+..... .....++..|+|||++. ...++.++|+|||||++|+|++|..||...........+....
T Consensus 168 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---------- 236 (313)
T cd06633 168 ASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND---------- 236 (313)
T ss_pred CcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----------
Confidence 865432 23457888999999984 3568889999999999999999999997765444443332100
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|... ....+..+++||.+||+.+|.+||++.++++||||+.
T Consensus 237 ---------------------------~~~~~-----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 237 ---------------------------SPTLQ-----SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred ---------------------------CCCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 00000 0011245789999999999999999999999999975
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.1e-34 Score=308.94 Aligned_cols=289 Identities=19% Similarity=0.238 Sum_probs=193.3
Q ss_pred EEeccC--CCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSA--AFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G--~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
..||+| +||+||++++..+|+.||+|++.... ...+.+.+|+.+++.+ +|+||++++++|...+..++|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF------RHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcceEeeeEecCCceEEE
Confidence 346666 99999999999999999999987532 2234556666666555 478999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+.+ ++.+++..... ..+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++++||+.....
T Consensus 78 ~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~ 151 (328)
T cd08226 78 SPFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSL 151 (328)
T ss_pred EecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhh
Confidence 999985 67766654321 12888999999999999999999999999999999999985 778999999854321
Q ss_pred cC---C-------ccccccCccccChhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 541 TD---N-------LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 541 ~~---~-------~~~~~gt~~Y~APE~l~~~--~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
.. . .....++..|+|||++.+. .++.++|||||||++|+|++|..||........+..+.......+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL 231 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc
Confidence 11 0 1112345679999999764 4789999999999999999999999876655544444332221111
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccc---cccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETN---QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
........................... ...................+..+++||++||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 100000000000000000000000000 00000000000000011234568999999999999999999999999999
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
.+
T Consensus 312 ~~ 313 (328)
T cd08226 312 KQ 313 (328)
T ss_pred HH
Confidence 64
No 259
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.1e-34 Score=295.96 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=198.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.++|++.+.||+|++|.||+|.+.. ++..||+|.+.... .....+.+|+.+++.++ |+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN------HQNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence 4679999999999999999999877 77889999887542 22345677777777664 68999999999
Q ss_pred EeCCeEEEEEEccc-cchHHHHhhhhcc-CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC-CCeE
Q 005590 453 YHLEHLFIVCELLR-ANLYEFQKFNQES-GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEI 529 (689)
Q Consensus 453 ~~~~~l~lVmEy~~-g~L~~l~~~~~~~-~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~-~~~v 529 (689)
......++||||+. ++|.+++...... .....+++..+..++.||+.||.|||+.+++|+||||+||+++..+ ...+
T Consensus 79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 99999999999997 5788777654321 1123488999999999999999999999999999999999998532 3468
Q ss_pred EEEecCCcccccCCcc-----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 005590 530 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 530 kL~DFGls~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~ 603 (689)
||+|||++........ ....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 238 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG 238 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876532211 1223467999999998899999999999999999997 999998876655444332110
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....| ...+..+.+||.+||+.+|++|||+.++|+|
T Consensus 239 ----------------------------------~~~~~---------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 239 ----------------------------------RLDPP---------KGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ----------------------------------cCCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00001 1123568899999999999999999999986
No 260
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.8e-34 Score=298.21 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=198.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg-----~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
++|++.+.||+|+||.||+|.+...+ ..+|+|.+.... .....+.+|+.+++.++ |+||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ------HPNIVCLLGVCT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC------CcccceEEEEEc
Confidence 57899999999999999999876555 679999987532 23455678888887764 689999999999
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 522 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~----------~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~ 522 (689)
.....+++|||+. ++|.+++....... ....+++..+..++.||+.||.|||+.|++|+||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9899999999998 47877776432211 113488899999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 005590 523 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 596 (689)
Q Consensus 523 ~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l 596 (689)
. ++.++|+|||++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+..
T Consensus 159 ~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 E--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4 778999999998754321 122355788999999998899999999999999999998 99999877665554
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH
Q 005590 597 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 676 (689)
Q Consensus 597 ~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa 676 (689)
..+..... ...| ...+.++.+|+.+||+.||.+|||+
T Consensus 237 ~~i~~~~~----------------------------------~~~~---------~~~~~~~~~l~~~c~~~~p~~Rp~~ 273 (283)
T cd05048 237 EMIRSRQL----------------------------------LPCP---------EDCPARVYALMIECWNEIPARRPRF 273 (283)
T ss_pred HHHHcCCc----------------------------------CCCc---------ccCCHHHHHHHHHHccCChhhCcCH
Confidence 44321000 0001 1234668899999999999999999
Q ss_pred HHHHcC
Q 005590 677 REALDH 682 (689)
Q Consensus 677 ~ElL~h 682 (689)
.|++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05048 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999875
No 261
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.7e-34 Score=303.18 Aligned_cols=253 Identities=28% Similarity=0.457 Sum_probs=201.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.++|.+.+.||+|+||.||++.+..+++.||+|.+... ......+.+|+.+++.+ .||||+++++++...+..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN------KHPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc------CCCCeeehhheeeeCCcE
Confidence 47899999999999999999999889999999998643 22334566777777665 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+.+ +|.+++... .+++..+..++.|++.||.|||++|++|+||||+||+++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~ 162 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcce
Confidence 999999985 676665422 2788899999999999999999999999999999999984 778999999987
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....+++.|+|||.+....++.++|+|||||++|++++|..||...+....+..+.. +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~--~~--------- 231 (293)
T cd06647 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NG--------- 231 (293)
T ss_pred ecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc--CC---------
Confidence 654322 2234678889999999988899999999999999999999999976544332211100 00
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
...++. ....+..+++||++||..+|++||++.+++.||||+..
T Consensus 232 -----------------------~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 232 -----------------------TPELQN-------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred -----------------------CCCCCC-------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 000000 01124568899999999999999999999999999864
No 262
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.3e-33 Score=288.29 Aligned_cols=248 Identities=32% Similarity=0.433 Sum_probs=202.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC--C
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 456 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--~ 456 (689)
+|++.+.||+|++|.||+|.+..+++.+++|++.... .....+.+|+.+++.++ |++|+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ------HPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC------CCCEeeEEEEEecCCCC
Confidence 5888999999999999999999899999999987654 34567778888888775 67999999999988 8
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++|+||+. ++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~--~~~~~l~d~~ 146 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS--DGVVKLADFG 146 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcccc
Confidence 9999999996 57777765432 3899999999999999999999999999999999999995 7889999999
Q ss_pred CcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHH
Q 005590 536 SSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLE 609 (689)
Q Consensus 536 ls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~-~~~~l~~i~~~~g~~~~e 609 (689)
.+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... .......+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------- 218 (260)
T cd06606 147 CAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-------- 218 (260)
T ss_pred cEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc--------
Confidence 98765443 233567889999999998889999999999999999999999997654 1111111100
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+|. ..+..+.+||.+||+.||++||++.++++||||
T Consensus 219 -------------------------~~~~~~~~~---------~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -------------------------SGEPPEIPE---------HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------------------------cCCCcCCCc---------ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000011111 124568899999999999999999999999997
No 263
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.9e-34 Score=292.84 Aligned_cols=245 Identities=20% Similarity=0.328 Sum_probs=195.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
++|++.+.||+|+||+||++.+.. +..+|+|.+.........+.+|+.+++.+ +||||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL------SHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC------CCCCeeeEEEEEccCCCcEE
Confidence 579999999999999999998643 45699999876544446677888888766 47899999999998889999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+.+ +|.+++..... .+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~ 149 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCcccee
Confidence 9999975 67776653221 3889999999999999999999999999999999999984 77899999998875
Q ss_pred ccCCcc-c---cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 540 QTDNLC-L---YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 540 ~~~~~~-~---~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... . ..++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+.....+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 220 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------- 220 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---------
Confidence 433221 1 234567999999998889999999999999999999 99999876655544444311100
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..+. ..+..+++++.+||+.||.+|||+.+++++
T Consensus 221 -------------------------~~~~---------~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 -------------------------YRPH---------LASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -------------------------CCCC---------CCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0011 123568899999999999999999999975
No 264
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1e-33 Score=293.37 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=195.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+..++|++.++||+|+||.||+|++..+ ..||+|+++........+.+|+.+++.++ |+||+++++.+. ...
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~ 74 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVS-EEP 74 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCC------CCCcceEEEEEC-CCC
Confidence 3457899999999999999999998655 46999999865544466788888888774 679999998874 456
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|+|||.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~--~~~~~L~dfg~ 148 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGL 148 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC--CCcEEeccCCc
Confidence 8999999985 7777775321 123788899999999999999999999999999999999984 78899999999
Q ss_pred cccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+........ ...++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.........+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~------- 221 (262)
T cd05071 149 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR------- 221 (262)
T ss_pred eeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-------
Confidence 876543322 1234567999999998889999999999999999999 8999987765554444321100
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+ ...+..+.+||.+||+.||++|||+.++++
T Consensus 222 ---------------------------~~~~---------~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 222 ---------------------------MPCP---------PECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ---------------------------CCCc---------cccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0000 112356889999999999999999999875
No 265
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.5e-33 Score=288.29 Aligned_cols=247 Identities=30% Similarity=0.457 Sum_probs=201.7
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||+|++|.||++++..+++.|++|.+.... .....+.+|+++++.++ |++++++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK------HPNIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC------CCCccEEEEEEEeCCEE
Confidence 5889999999999999999999999999999997654 34556777888777764 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++... ..+++..+..++.|++.||.+||+.||+|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~~ 146 (254)
T cd06627 75 YIILEYAENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK--DGVVKLADFGVA 146 (254)
T ss_pred EEEEecCCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC--CCCEEEeccccc
Confidence 999999986 676666533 23889999999999999999999999999999999999985 788999999998
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------- 213 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------------- 213 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-------------
Confidence 7655432 235678899999999888889999999999999999999999976543332222110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....++ ...+..+.++|.+||..+|++|||+.+++.||||
T Consensus 214 ---------------------~~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 214 ---------------------DDHPPLP---------EGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ---------------------cCCCCCC---------CCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0000111 1124568899999999999999999999999997
No 266
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.1e-35 Score=305.18 Aligned_cols=248 Identities=30% Similarity=0.416 Sum_probs=196.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++......
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~ 77 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYITRYYGSYLKGTKL 77 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC------CCCccHhhhcccccCCce
Confidence 35667788999999999999999999999999987432 2334566777777765 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.. ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~ 148 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEEccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEcccccc
Confidence 999999986 56555432 12788999999999999999999999999999999999984 788999999998
Q ss_pred ccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------------ 216 (277)
T cd06642 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN------------ 216 (277)
T ss_pred ccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC------------
Confidence 7654322 2245788999999999988999999999999999999999999754333222111000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
....++ ...+..+.+||.+||+.+|++|||+.++++||||.
T Consensus 217 ----------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06642 217 ----------------------SPPTLE---------GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT 257 (277)
T ss_pred ----------------------CCCCCC---------cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence 000000 01235578999999999999999999999999986
No 267
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-33 Score=297.47 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=200.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
+|...+.||+|++|.||++.+..+++.+++|++.... .....+.+|+.+++.+ +|+||+++++++...++.++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~------~h~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY------QHPNIVEMYSSYLVGDELWV 93 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc------CCCChheEEEEEEcCCeEEE
Confidence 4556679999999999999998999999999886432 2234566777777766 47899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
|+||+.+ +|.+++.. ..++...+..++.||+.||.|||+.||+||||+|+||+++. ++.++|+|||.+..
T Consensus 94 v~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~ 164 (285)
T cd06648 94 VMEFLEGGALTDIVTH-------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS--DGRVKLSDFGFCAQ 164 (285)
T ss_pred EEeccCCCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC--CCcEEEcccccchh
Confidence 9999975 66665543 12788999999999999999999999999999999999984 78899999998764
Q ss_pred ccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 540 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 540 ~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
.... .....+++.|+|||.+.+..++.++|+||+||++|+|++|+.||...+.......+.....+
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~----------- 233 (285)
T cd06648 165 VSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPP----------- 233 (285)
T ss_pred hccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCC-----------
Confidence 3321 22346888999999999888999999999999999999999999876655444443211000
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
.+.. ....+..+.+||++||+.+|++|||+.++++||||++.
T Consensus 234 -----------------------~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 275 (285)
T cd06648 234 -----------------------KLKN-------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKA 275 (285)
T ss_pred -----------------------CCcc-------cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccC
Confidence 0000 01124568899999999999999999999999999763
No 268
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.4e-33 Score=291.56 Aligned_cols=248 Identities=21% Similarity=0.302 Sum_probs=199.1
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+..++|++.+.||+|++|.||+|.+. .++.||+|.++........+.+|+.+++.++ |+||+++++++...+.
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR------HPKLIQLYAVCTLEEP 75 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC------CCCccceeEEEecCCC
Confidence 34578999999999999999999974 4578999999876544567788888888875 6799999999999999
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+. ++|.+++.... ...+++..+..++.|++.||.+||+.||+|+||||+||+++. ++.++|+|||+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~ 149 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGL 149 (261)
T ss_pred eeeeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcce
Confidence 999999995 67888775432 223889999999999999999999999999999999999985 77899999999
Q ss_pred cccccCCcc-ccc---cCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLC-LYV---QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~-~~~---gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+........ ... .+..|+|||.+.+..++.++|+||||+++|+|++ |+.||.+......+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------- 222 (261)
T cd05068 150 ARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR------- 222 (261)
T ss_pred EEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 876543221 112 2357999999999899999999999999999999 9999988766555544421100
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+ ...+..+.++|.+||+.+|++||++.++++
T Consensus 223 ---------------------------~~~~---------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 ---------------------------MPCP---------PGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ---------------------------CCCC---------CcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 0000 012356889999999999999999999975
No 269
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.5e-34 Score=296.60 Aligned_cols=250 Identities=26% Similarity=0.411 Sum_probs=195.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~------~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
||.+.+.||+|+||.||++++...+..+++|+++.. .........|+.+++.+ .||||+++++++...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~ 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL------DHPAIVKFHASFLER 74 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC------CCCcHHHHHHHHhcC
Confidence 689999999999999999999888877888876542 11223444566666655 478999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
...++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++ .+.++|+||
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~ 149 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDF 149 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeeccc
Confidence 999999999985 666655432221 23389999999999999999999999999999999999997 456999999
Q ss_pred CCcccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
|.+...... .....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||...........+... +.+
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---- 223 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTP---- 223 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCC----
Confidence 988765332 22345788999999998888999999999999999999999999766554444333210 000
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
..+ ...+.++.++|.+||+.+|++||++.|+++||||
T Consensus 224 ----------------------------~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 ----------------------------SLP---------ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ----------------------------CCc---------chhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 001 1123568899999999999999999999999997
No 270
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.5e-35 Score=317.89 Aligned_cols=251 Identities=29% Similarity=0.507 Sum_probs=211.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+.|.+.++||+|.|++|.+|++..++..||||++.+.. .......+|+++|+.++ ||||++++.+.....
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~------HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN------HPNIVKLFSVIETEA 128 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC------Ccceeeeeeeeeecc
Confidence 467999999999999999999999999999999998642 23345678888888875 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+|+||||+. |.+.+++..+.. ..+..++.++.|++.|++|||+++|+|||||.+||||+ .+..+||+|||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~--~~mnikIaDfg 200 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD--ENMNIKIADFG 200 (596)
T ss_pred eeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc--cccceeeeccc
Confidence 9999999998 468888876654 66788999999999999999999999999999999999 47779999999
Q ss_pred CcccccC--CccccccCccccChhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 536 SSCFQTD--NLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 536 ls~~~~~--~~~~~~gt~~Y~APE~l~~~~~s-~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
++.+... ...+++|++.|.|||++.+..|. ..+|+||+|+++|-|+.|.+||.+.+..++-.+.+
T Consensus 201 fS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl------------ 268 (596)
T KOG0586|consen 201 FSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVL------------ 268 (596)
T ss_pred cceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhe------------
Confidence 9987653 45678999999999999998865 78999999999999999999998765444332221
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
-..+.+|. .+..++.+||++||..+|.+|++.+++..|.|+...
T Consensus 269 -----------------------~gk~rIp~---------~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 269 -----------------------RGKYRIPF---------YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -----------------------eeeecccc---------eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 11233332 234567899999999999999999999999998753
No 271
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=315.87 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=205.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.|.=++-||.|+||.||.|+|..+.+.||||.+.-. ..--..++.|+++|+.++ |||++.+.++|.....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~------HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR------HPNTIEYKGCYLREHT 100 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc------CCCcccccceeeccch
Confidence 355556799999999999999999999999998643 122245677888888775 7899999999998889
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
.++|||||-|+-.+++...... +-+.++..|+.+.+.||.|||+.+.||||||..|||++ +.|.|||+|||.+
T Consensus 101 aWLVMEYClGSAsDlleVhkKp-----lqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs--e~g~VKLaDFGSA 173 (948)
T KOG0577|consen 101 AWLVMEYCLGSASDLLEVHKKP-----LQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS--EPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHHhccHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec--CCCeeeeccccch
Confidence 9999999999877877766543 88999999999999999999999999999999999999 5999999999998
Q ss_pred ccccCCccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
.... +...++|||.|||||+++ .+.|+-++||||||++..||...++|+-+-+...-+-.|...-.
T Consensus 174 si~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes---------- 242 (948)
T KOG0577|consen 174 SIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---------- 242 (948)
T ss_pred hhcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC----------
Confidence 6544 456689999999999997 45699999999999999999999999866555544444431111
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
|... ...-+..|++||..||+.-|.+|||++++|+|+|+..+
T Consensus 243 ---------------------------PtLq-----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 243 ---------------------------PTLQ-----SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred ---------------------------CCCC-----CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 1000 00113468999999999999999999999999998763
No 272
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.6e-33 Score=292.30 Aligned_cols=248 Identities=27% Similarity=0.387 Sum_probs=190.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcc
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 465 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~ 465 (689)
..||+|+||.||++++..++..||+|.+.... .....+.+|+.+++.++ |+||+++++++...+..++||||+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK------HRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC------CCCeeeeeeeeccCCEEEEEEecC
Confidence 47999999999999999999999999887543 33456778888887764 789999999999999999999999
Q ss_pred cc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC-
Q 005590 466 RA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN- 543 (689)
Q Consensus 466 ~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~- 543 (689)
.+ +|.+++...... ...++..+..++.||+.||.|||+.||+||||||+||+++. ..+.++|+|||.+......
T Consensus 88 ~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 88 PGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred CCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCeEEEecchhheecccCC
Confidence 85 677666532211 11277888899999999999999999999999999999974 3568999999988654321
Q ss_pred --ccccccCccccChhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 005590 544 --LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 619 (689)
Q Consensus 544 --~~~~~gt~~Y~APE~l~~~~--~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~ 619 (689)
.....+++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...............
T Consensus 164 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~----------------- 226 (268)
T cd06624 164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM----------------- 226 (268)
T ss_pred CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh-----------------
Confidence 22245788999999987643 788999999999999999999999643211100000000
Q ss_pred hhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 620 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
......+| ...++.+++||++||+.+|++|||+.|++.||||
T Consensus 227 ---------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 227 ---------------FKIHPEIP---------ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ---------------hccCCCCC---------cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00000111 1234668899999999999999999999999997
No 273
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-33 Score=291.75 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=198.0
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++..++|++.++||+|+||.||+|.+ .+++.||+|.+.........+.+|+.+++.++ |+||+++++++. .+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~ 73 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ------HPRLVRLYAVVT-QE 73 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC------CcCeeeEEEEEc-cC
Confidence 35568899999999999999999985 45788999999876555567888988888774 679999999864 56
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+. ++|.+++.... ...++...+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg 147 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE--TLCCKIADFG 147 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC--CCCEEEccCc
Confidence 7899999997 47777765322 223888999999999999999999999999999999999985 7789999999
Q ss_pred CcccccCCc----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
++....... ....++..|+|||++.+..++.++|+||||+++|+|++ |++||.+.+..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 221 (260)
T cd05067 148 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR------ 221 (260)
T ss_pred ceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC------
Confidence 987654221 12234668999999998889999999999999999999 9999987765555444321100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+ ...+.++.+||.+||..+|++|||++++++
T Consensus 222 ----------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 222 ----------------------------MPRP---------DNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ----------------------------CCCC---------CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0011 112356889999999999999999999875
No 274
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=290.23 Aligned_cols=253 Identities=27% Similarity=0.387 Sum_probs=203.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
+.+++..||.|..|+||++..+.+|...|||.+.... ....+++..+.++...+ +.|+||+++++|......+
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeCchHH
Confidence 4566778999999999999999999999999998643 33345555555544433 5789999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
|.||.|..-...+++..+. ++++..+-.+...++.||.||.++ ||+|||+||+|||++ +.|.|||||||.+.
T Consensus 168 IcMelMs~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD--e~GniKlCDFGIsG 240 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD--ERGNIKLCDFGISG 240 (391)
T ss_pred HHHHHHHHHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc--cCCCEEeecccccc
Confidence 9999998665555554332 288989999999999999999975 899999999999999 58999999999998
Q ss_pred cccCCc--cccccCccccChhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCcHHHHh
Q 005590 539 FQTDNL--CLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 539 ~~~~~~--~~~~gt~~Y~APE~l~~---~~~s~~~DIwSLGvil~eLltG~~PF~~-~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
+..+.. +...|.+.|||||.+.- ..|+.++|+||||+.++||.||+.||.+ ....+.+.++....+
T Consensus 241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-------- 312 (391)
T KOG0983|consen 241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-------- 312 (391)
T ss_pred eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC--------
Confidence 776543 44688999999999964 3599999999999999999999999987 455566666542111
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+.+..+-. .++.|++|+..||+.|+++||...+||+|||+..
T Consensus 313 --------------------------------P~L~~~~g-FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 313 --------------------------------PLLPGHMG-FSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred --------------------------------CCCCcccC-cCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 11111111 4577999999999999999999999999999853
No 275
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.3e-33 Score=298.14 Aligned_cols=252 Identities=19% Similarity=0.251 Sum_probs=196.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc--EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~--~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||+|.+..++. .+++|.++.. ......+.+|+.++.++. .||||+++++++....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-----HHPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-----CCCchhheEEEEccCC
Confidence 579999999999999999999877665 4688887642 233456777888887774 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 525 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~----------~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~ 525 (689)
..++||||+. ++|.+++....... ....+++..++.++.||+.||.|||+.||+||||||+|||++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~-- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE-- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--
Confidence 9999999997 57888775433111 1124888999999999999999999999999999999999984
Q ss_pred CCeEEEEecCCcccccCCcccc--ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 005590 526 RCEIKIIDLGSSCFQTDNLCLY--VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 526 ~~~vkL~DFGls~~~~~~~~~~--~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~ 602 (689)
++.+||+|||++.......... ..+..|+|||++.+..++.++|||||||++|+|++ |..||......+....+...
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 7889999999986433221211 22456999999998899999999999999999997 99999876655544433211
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
. ....| ...+..+.+||.+||+.+|.+|||++++++.
T Consensus 235 ~----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 Y----------------------------------RMEKP---------RNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C----------------------------------CCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00111 1134568899999999999999999999764
No 276
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-33 Score=293.19 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=192.5
Q ss_pred EEEEEEeccCCCCceEEEEECC---CCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~---tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
|++.+.||+|+||.||+|.+.. ++..||+|+++.+. .....+.+|+.+++.++ |+||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD------HPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEeeeccCC
Confidence 5678899999999999998754 34789999987542 23456677887777664 789999999886554
Q ss_pred e------EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 457 H------LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 457 ~------l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
. .++||||+.+ +|..++...........+++..+..++.||+.||.|||+.+|+||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~ 152 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTV 152 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeE
Confidence 3 7999999985 66666644332223345899999999999999999999999999999999999984 7889
Q ss_pred EEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 005590 530 KIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 530 kL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~ 603 (689)
||+|||+++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+.+..+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232 (273)
T ss_pred EECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987643321 11234567999999988889999999999999999999 999998766555443332100
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....|. ..+..+.++|.+||+.||++|||+.|++++
T Consensus 233 ----------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 ----------------------------------RLKQPE---------DCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ----------------------------------CCCCCc---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000111 124568899999999999999999999864
No 277
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.3e-33 Score=291.68 Aligned_cols=247 Identities=23% Similarity=0.331 Sum_probs=196.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+..++|++.+.||+|+||.||+|.+. .+..+|+|.+.........+.+|+.+++.++ |++|+++++++. ...
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~ 74 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR------HDKLVQLYAVVS-EEP 74 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC------CCceEEEEeEEC-CCC
Confidence 45678999999999999999999865 5677999999875555567788998888775 678999999875 456
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+++.... ...+++..++.++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~--~~~~~l~dfg~ 148 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD--GLVCKIADFGL 148 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC--CceEEeCCcee
Confidence 8999999985 7777765321 223789999999999999999999999999999999999984 78899999999
Q ss_pred cccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+........ ...++..|+|||.+.+..++.++|+||||+++|+|++ |.+||.+....+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 220 (260)
T cd05070 149 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-------- 220 (260)
T ss_pred eeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------
Confidence 876543221 1234567999999988889999999999999999999 899998766555554432110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.+||.+||..+|++|||+.++++
T Consensus 221 --------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 --------------------------RMPCP---------QDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --------------------------CCCCC---------CcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00011 112356889999999999999999999873
No 278
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=9.1e-34 Score=297.12 Aligned_cols=256 Identities=29% Similarity=0.440 Sum_probs=207.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..+.|++.+.||+|++|.||++.+..++..+++|++.........+.+|+.+++.++ |+||+++++.+......
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK------HPNIVDYYDSYLVGDEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC------CCCeeEEEEEEEECCEE
Confidence 346789999999999999999999888999999999865444566778888887774 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++|+||+. ++|.+++.... ..++...+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~--~~~~~l~d~~~~ 163 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK--DGSVKLADFGFA 163 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC--CCCEEECccchh
Confidence 99999999 57888776543 23889999999999999999999999999999999999984 778999999987
Q ss_pred ccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+... +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~--------- 233 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GI--------- 233 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC---------
Confidence 654332 12345788999999999888999999999999999999999999876554433332200 00
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
...+. ....+..+.+||++||+.+|.+|||+.++|+||||.+.
T Consensus 234 ------------------------~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 234 ------------------------PPLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ------------------------CCCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 00000 01123568899999999999999999999999999863
No 279
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.9e-34 Score=292.28 Aligned_cols=244 Identities=32% Similarity=0.470 Sum_probs=197.2
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||.|+||.||++++..+|+.+++|++..+. .....+.+|+++++.++ |+||+++++.+......++||||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------SPYVVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC------CcchhHHHHheecCcEEEEEEec
Confidence 689999999999999899999999987643 23455666777776664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|.+++.... .+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 75 LPGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccC
Confidence 975 7777765322 3889999999999999999999999999999999999985 778999999987653222
Q ss_pred -----------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 005590 544 -----------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 612 (689)
Q Consensus 544 -----------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~ 612 (689)
.....++..|+|||.+....++.++|+||||+++|+|++|..||......+....+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~---------- 216 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG---------- 216 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------
Confidence 12346788899999999888999999999999999999999999877665555443210
Q ss_pred hhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH---HHHHcCCCCCCC
Q 005590 613 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA---REALDHPWLQHP 688 (689)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa---~ElL~hpwf~~~ 688 (689)
....|... ..+..+.+||++||+.+|.+|||+ .++|+||||++.
T Consensus 217 -------------------------~~~~~~~~-------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 217 -------------------------KIEWPEDV-------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred -------------------------CcCCCccc-------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 00011100 024568899999999999999999 999999999863
No 280
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-33 Score=289.63 Aligned_cols=239 Identities=24% Similarity=0.359 Sum_probs=187.8
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
+.||+|+||.||+|++..+++.+|+|.+... ......+.+|+++++.+ +|+||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY------SHPNIVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEcCCCCeEEEEee
Confidence 3689999999999999999999999987643 33445677888888776 478999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|.+++.... ..+++..++.++.|++.||.|||+.||+|+||||+||+++. ++.+||+|||++......
T Consensus 75 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 75 VQGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE--KNVLKISDFGMSREEEDG 147 (252)
T ss_pred ccCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC--CCcEEECccccCcccccc
Confidence 975 6766664321 23788999999999999999999999999999999999984 778999999998654332
Q ss_pred ccc-----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 544 LCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 544 ~~~-----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
... ...+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+...
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~--------------- 212 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG--------------- 212 (252)
T ss_pred cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC---------------
Confidence 111 122456999999998889999999999999999998 99999765444333322110
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.....+. ..+..+.+||.+||+.+|++|||+.++++
T Consensus 213 -------------------~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 213 -------------------VRLPCPE---------LCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------------------CCCCCcc---------cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0001111 12356889999999999999999999985
No 281
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-33 Score=291.54 Aligned_cols=245 Identities=21% Similarity=0.340 Sum_probs=195.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
.+|++.+.||+|+||.||++.+. ++..+|+|++.........+.+|+.+++.++ |+||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS------HPNLVQLYGVCTKQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC------CCCEEEEEEEEcCCCceEE
Confidence 46889999999999999999875 4678999998764444456778888888764 7899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+.+ +|.+++..... .+++..+..++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++..
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~ 149 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARY 149 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCccccee
Confidence 9999975 67777653321 3889999999999999999999999999999999999984 78899999999876
Q ss_pred ccCCccc----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 540 QTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 540 ~~~~~~~----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
....... ..++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05059 150 VLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY----------- 218 (256)
T ss_pred cccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 5432211 122357999999999899999999999999999999 899998765555444332110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....| ...+..+.+++.+||..+|++|||+.|+++.
T Consensus 219 -----------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 -----------------------RLYRP---------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -----------------------cCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 00111 1134568899999999999999999999874
No 282
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.6e-33 Score=288.90 Aligned_cols=248 Identities=24% Similarity=0.316 Sum_probs=200.2
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+..++|++.+.||+|+||.||+|.+. .++.+|||.+..+......+.+|+.+++.++ |+||+++++++.....
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR------HDKLVQLYAVCSEEEP 75 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC------CCCEeeeeeeeecCCc
Confidence 45678999999999999999999975 5578999999876555567888988888774 6799999999998899
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||+++. ++.++|+|||.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~--~~~~~l~d~g~ 149 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE--NLVCKIADFGL 149 (261)
T ss_pred eEEEEeccCCCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC--CCCEEECcccc
Confidence 9999999985 6777765422 123889999999999999999999999999999999999985 78899999999
Q ss_pred cccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+........ ....+..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+....+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~------- 222 (261)
T cd05034 150 ARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR------- 222 (261)
T ss_pred ceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 876543211 1223567999999999889999999999999999998 9999987766655555431110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+. ..+..+.++|.+||+.+|++||++.++++
T Consensus 223 ---------------------------~~~~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 223 ---------------------------MPRPP---------NCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---------------------------CCCCC---------CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00010 11356889999999999999999999874
No 283
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.5e-33 Score=292.46 Aligned_cols=248 Identities=19% Similarity=0.258 Sum_probs=190.6
Q ss_pred EEEEEeccCCCCceEEEEECCCCc--EEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC---
Q 005590 384 YVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 455 (689)
Q Consensus 384 ~i~~~LG~G~fG~Vyla~d~~tg~--~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~--- 455 (689)
.+.+.||+|+||.||+|++..++. .+|+|.++.. ......+.+|+.+++.++ |+||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD------HPNVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEccCCcc
Confidence 467889999999999999877765 6899988653 333456677888877764 78999999976532
Q ss_pred ---CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 456 ---EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 456 ---~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
...++||||+. ++|.+++...........+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl 153 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCV 153 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEE
Confidence 25789999998 567776654433223344889999999999999999999999999999999999984 788999
Q ss_pred EecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCC
Q 005590 532 IDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 532 ~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
+|||++....... ....+++.|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.........+...-
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-- 231 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN-- 231 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--
Confidence 9999987654321 12245678999999999999999999999999999999 899998765554443332100
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....+ ......+.++|.+||+.||++|||+.+++++
T Consensus 232 --------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 232 --------------------------------RLKQP---------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --------------------------------CCCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00000 0123457899999999999999999999864
No 284
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-33 Score=297.16 Aligned_cols=263 Identities=20% Similarity=0.231 Sum_probs=187.4
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecchhhh--H----hHHHHHHHHHHhcccCCCCCCce
Q 005590 375 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDFF--D----QSLDEIKLLKLVNKNDPADEHHI 445 (689)
Q Consensus 375 ~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~t---g~~vAvKii~~~~~~~--~----~~~~Ei~iL~~l~~~~~~~h~~I 445 (689)
+.++..++|++.++||+|+||+||+|++..+ +..+|+|+........ + ....+......+.......|++|
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 4556778999999999999999999998777 6778888754332110 0 00011112222222334678999
Q ss_pred eEEEEEEEeCC----eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 005590 446 LRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 521 (689)
Q Consensus 446 v~l~~~f~~~~----~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl 521 (689)
+++++++.... ..+++++++..++.+.+..... .++..++.++.||+.||.|||+.+|+||||||+|||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill 159 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 99998766443 4578899887777666543221 5677889999999999999999999999999999999
Q ss_pred eccCCCeEEEEecCCcccccC----------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh
Q 005590 522 KSYQRCEIKIIDLGSSCFQTD----------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 591 (689)
Q Consensus 522 ~~~~~~~vkL~DFGls~~~~~----------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~ 591 (689)
+. ++.++|+|||+++.... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 160 ~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 160 DG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred cC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 84 67899999999875421 1123468999999999999999999999999999999999999998753
Q ss_pred HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCC
Q 005590 592 VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQ 671 (689)
Q Consensus 592 ~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~ 671 (689)
....+...... + ..+.+. .....+ ...+..+.++++.|+..+|+
T Consensus 238 ~~~~~~~~~~~------~-------~~~~~~-------------~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 281 (294)
T PHA02882 238 HNGNLIHAAKC------D-------FIKRLH-------------EGKIKI----------KNANKFIYDFIECVTKLSYE 281 (294)
T ss_pred cchHHHHHhHH------H-------HHHHhh-------------hhhhcc----------CCCCHHHHHHHHHHHhCCCC
Confidence 22211111100 0 000000 000001 11245688999999999999
Q ss_pred CCcCHHHHHc
Q 005590 672 RRPTAREALD 681 (689)
Q Consensus 672 kRpTa~ElL~ 681 (689)
+||+.+++++
T Consensus 282 ~rp~~~~l~~ 291 (294)
T PHA02882 282 EKPDYDALIK 291 (294)
T ss_pred CCCCHHHHHH
Confidence 9999999975
No 285
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-33 Score=293.56 Aligned_cols=251 Identities=21% Similarity=0.273 Sum_probs=195.5
Q ss_pred CcEEEEEEeccCCCCceEEEEE----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d----~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+|++.+.||+|+||+||+|.+ ...++.+|+|.+.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH------HPNIVCLLGVVTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC------CCCeeeEEEEEec
Confidence 5789999999999999999985 3456789999987532 22345677888888774 6899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhcc-----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQES-----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 522 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~-----------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~ 522 (689)
....++||||+.+ +|.+++...... .....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 9999999999984 777776432210 0122378888999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 005590 523 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 596 (689)
Q Consensus 523 ~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l 596 (689)
. ++.+||+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.......
T Consensus 159 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 159 E--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 678999999998754322 122344667999999998889999999999999999998 99999876655444
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH
Q 005590 597 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 676 (689)
Q Consensus 597 ~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa 676 (689)
..+.... ....+ ...+..+.++|.+||+.||.+||++
T Consensus 237 ~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~ 273 (283)
T cd05090 237 EMVRKRQ----------------------------------LLPCS---------EDCPPRMYSLMTECWQEGPSRRPRF 273 (283)
T ss_pred HHHHcCC----------------------------------cCCCC---------CCCCHHHHHHHHHHcccCcccCcCH
Confidence 4332100 00011 1124568899999999999999999
Q ss_pred HHHHcC
Q 005590 677 REALDH 682 (689)
Q Consensus 677 ~ElL~h 682 (689)
.+++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05090 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999875
No 286
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-33 Score=297.77 Aligned_cols=256 Identities=22% Similarity=0.335 Sum_probs=198.8
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECC-------CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILR 447 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~-------tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~ 447 (689)
++..++|.+.+.||+|+||.||++++.. ++..+|+|++..+. .....+..|+.+++.+. .|+||++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~ 88 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIIN 88 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEee
Confidence 3445789999999999999999998643 23569999997542 23456777888888774 3789999
Q ss_pred EEEEEEeCCeEEEEEEccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 448 LYDYFYHLEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 448 l~~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~----------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
+++++......++||||+. ++|.+++...... .....++...+..++.||+.||.|||+.|++||||||
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp 168 (307)
T cd05098 89 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAA 168 (307)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence 9999999999999999998 4788887654321 1223488899999999999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 590 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~ 590 (689)
+||+++. ++.++|+|||.+....... ....+++.|+|||++.+..++.++|+|||||++|+|++ |..||...
T Consensus 169 ~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 169 RNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred HheEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999984 7889999999986543211 11123467999999999889999999999999999998 89999876
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCC
Q 005590 591 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 670 (689)
Q Consensus 591 ~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP 670 (689)
+..+....+... .....|. ..+..+.+||.+||..+|
T Consensus 247 ~~~~~~~~~~~~----------------------------------~~~~~~~---------~~~~~~~~li~~~l~~~p 283 (307)
T cd05098 247 PVEELFKLLKEG----------------------------------HRMDKPS---------NCTNELYMMMRDCWHAVP 283 (307)
T ss_pred CHHHHHHHHHcC----------------------------------CCCCCCC---------cCCHHHHHHHHHHcccCh
Confidence 655544433210 0000111 123568899999999999
Q ss_pred CCCcCHHHHHcC
Q 005590 671 QRRPTAREALDH 682 (689)
Q Consensus 671 ~kRpTa~ElL~h 682 (689)
++|||+.+++++
T Consensus 284 ~~Rps~~evl~~ 295 (307)
T cd05098 284 SQRPTFKQLVED 295 (307)
T ss_pred hhCcCHHHHHHH
Confidence 999999999864
No 287
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.8e-34 Score=292.85 Aligned_cols=246 Identities=23% Similarity=0.349 Sum_probs=198.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..+|++.++||.|+||.||+|.+.. ++.+|+|++..... ....+.+|+.+++.++ |+||+++++++......
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 77 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR------HKHLISLFAVCSVGEPV 77 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC------CcchhheeeeEecCCCe
Confidence 3579999999999999999999877 89999999886543 3456777888877664 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++.... ...+++..+..++.||+.||.|||+.||+|+||||+||+++. ++.+||+|||.+
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~ 151 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLA 151 (261)
T ss_pred EEEEeecccCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccch
Confidence 999999985 7887775422 123788999999999999999999999999999999999984 788999999998
Q ss_pred ccccCCcc---ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 538 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 538 ~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
........ ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..+.+..+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------- 222 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR--------- 222 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc---------
Confidence 76543221 2234567999999998899999999999999999998 8999987766555554431100
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...+ ...++.+.++|.+||+.||++|||+.++++
T Consensus 223 -------------------------~~~~---------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 -------------------------MPCP---------AKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -------------------------CCCC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0011 112356889999999999999999999985
No 288
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.8e-33 Score=288.20 Aligned_cols=245 Identities=20% Similarity=0.344 Sum_probs=199.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.++|++.+.||.|+||.||+|.. .|+.||+|.+........++.+|+.+++.++ |+||+++++++......+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLR------HPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcC------CcceeeeEEEEcCCCCeE
Confidence 46789999999999999999985 4899999999876555567888888888774 679999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+. ++|.+++..... ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||.+.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~--~~~~~l~d~g~~~ 150 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE--DLVAKVSDFGLAK 150 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC--CCCEEEccccccc
Confidence 9999998 478777754321 23889999999999999999999999999999999999984 7889999999987
Q ss_pred cccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 539 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 539 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
...........+..|+|||.+....++.++|+||||+++|+|++ |..||...+..+....+....
T Consensus 151 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05039 151 EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------------- 216 (256)
T ss_pred ccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 76544333345667999999988889999999999999999997 999998766555443332100
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....| ...++.+.+||.+||..+|++|||+.++++
T Consensus 217 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 217 --------------------RMEAP---------EGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --------------------CCCCc---------cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00011 112456889999999999999999999985
No 289
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=306.59 Aligned_cols=257 Identities=26% Similarity=0.329 Sum_probs=206.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.+.|+.-++||+||||.|+-++...||+.||+|.+.+. +......++|..||.+++. ++||.+-..|.++
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s------~FiVslaYAfeTk 257 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS------PFIVSLAYAFETK 257 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc------CcEEEEeeeecCC
Confidence 45688889999999999999999999999999987543 2234566788889998875 4899999999999
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 456 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 456 ~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.+|+||..|+|+-+.+..++... ..|++++++.++.+|++||.+||..+||+|||||+|||++ +.|+|+|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD--d~GhvRISDLG 332 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD--DHGHVRISDLG 332 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec--cCCCeEeeccc
Confidence 999999999998765555544332 3499999999999999999999999999999999999999 59999999999
Q ss_pred CcccccC--CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 536 SSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 536 ls~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+|..... .....+||.+|||||++.+..|+...|+|||||+||+|+.|+.||...-...--.++-+.
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr----------- 401 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR----------- 401 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH-----------
Confidence 9987643 445569999999999999999999999999999999999999999643221111111000
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
........| ...++++++|.+.+|+.||.+|.. ++++-+||||+.
T Consensus 402 --------------------~~~~~~ey~---------~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 402 --------------------TLEDPEEYS---------DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred --------------------Hhcchhhcc---------cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 001111112 123567899999999999999974 779999999975
No 290
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-33 Score=287.31 Aligned_cols=251 Identities=27% Similarity=0.379 Sum_probs=201.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+|++.+.||.|+||.||++++..+++.+|+|.+.... .......+|+++++.++ |+||+++++++......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN------HPNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC------CCCchhhhhhhccCCEE
Confidence 5899999999999999999999999999999987532 22345556777777664 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.+ +|.+++..... ....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~ 150 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGIS 150 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec--CCcEEEeeccch
Confidence 999999975 67776654322 2234889999999999999999999999999999999999995 778999999998
Q ss_pred ccccCC-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 538 CFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 538 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-------------- 216 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------
Confidence 765443 22245788999999999989999999999999999999999999876654443332210
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
..+... ...+..++++|.+||..+|.+|||+.++++||++
T Consensus 217 -----------------------~~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 217 -----------------------KYPPIP------PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -----------------------CCCCCc------hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 000000 0123568899999999999999999999999985
No 291
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.3e-33 Score=294.79 Aligned_cols=250 Identities=23% Similarity=0.289 Sum_probs=196.5
Q ss_pred CcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+|.+.+.||+|+||+||++.+ ..++..+|+|.+... ......+.+|+.+++.+. |+||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ------HEHIVKFYGVCVE 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEec
Confidence 5799999999999999999985 234567999988753 233456778888888774 6799999999999
Q ss_pred CCeEEEEEEccc-cchHHHHhhhhc-------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC
Q 005590 455 LEHLFIVCELLR-ANLYEFQKFNQE-------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 526 (689)
Q Consensus 455 ~~~l~lVmEy~~-g~L~~l~~~~~~-------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~ 526 (689)
.+..++||||+. ++|.+++..... ......+++..+..++.||+.||.|||+.|++||||||+|||++. +
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--N 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--C
Confidence 999999999998 467777653321 111224899999999999999999999999999999999999984 7
Q ss_pred CeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHH
Q 005590 527 CEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARII 600 (689)
Q Consensus 527 ~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~ 600 (689)
+.++|+|||++....... ....++..|+|||++.+..++.++|+|||||++|+|++ |.+||......+.+..+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 889999999987543221 12234678999999999899999999999999999998 999998776655554443
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
... ....+ ...+..+.+||.+||+.||.+|||+.+++
T Consensus 237 ~~~----------------------------------~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 237 QGR----------------------------------VLQRP---------RTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred cCC----------------------------------cCCCC---------CCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 110 00001 11235688999999999999999999986
Q ss_pred c
Q 005590 681 D 681 (689)
Q Consensus 681 ~ 681 (689)
+
T Consensus 274 ~ 274 (288)
T cd05093 274 S 274 (288)
T ss_pred H
Confidence 4
No 292
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-33 Score=288.84 Aligned_cols=247 Identities=24% Similarity=0.356 Sum_probs=195.1
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+..++|.+.+.||+|++|.||++.+..+ ..+|+|++..+......+.+|+++++.+. |++++++++++. .+.
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~ 74 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLR------HDKLVPLYAVVS-EEP 74 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCC------CCCeeeEEEEEc-CCC
Confidence 3457899999999999999999987654 46999998765545566778888888774 679999998875 466
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+.+ +|.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~--~~~~~l~dfg~ 148 (260)
T cd05069 75 IYIVTEFMGKGSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD--NLVCKIADFGL 148 (260)
T ss_pred cEEEEEcCCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCeEEECCCcc
Confidence 8999999985 7887775422 123788899999999999999999999999999999999984 78899999999
Q ss_pred cccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+........ ...++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------- 220 (260)
T cd05069 149 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-------- 220 (260)
T ss_pred ceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------
Confidence 876543221 1234667999999998889999999999999999999 999998766555444332110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.+||++||..||++||+++++++
T Consensus 221 --------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 --------------------------RMPCP---------QGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --------------------------CCCCC---------cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00011 112356889999999999999999999875
No 293
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-33 Score=298.91 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=195.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcE--EEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~--vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||+|.+..++.. +++|.++.. ......+.+|+.++..+. +|+||+++++++...+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCCC
Confidence 5799999999999999999998777764 577766532 233456777888888773 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 525 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~----------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~ 525 (689)
..++||||+. ++|.+++...... .....+++..++.++.||+.||+|||+.||+||||||+|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~-- 159 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-- 159 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC--
Confidence 9999999997 5788777644321 11234889999999999999999999999999999999999984
Q ss_pred CCeEEEEecCCcccccCCccc--cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 005590 526 RCEIKIIDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 526 ~~~vkL~DFGls~~~~~~~~~--~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~ 602 (689)
++.+||+|||++......... ...+..|+|||.+.+..++.++|||||||++|+|+| |..||...+..+....+...
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 778999999998643221111 223567999999988889999999999999999998 99999776554443332100
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.....+ ...+..+.+||.+||+.+|++||+++++|++
T Consensus 240 ----------------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 240 ----------------------------------YRLEKP---------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ----------------------------------CcCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000001 0124568899999999999999999999975
No 294
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.6e-33 Score=299.04 Aligned_cols=251 Identities=25% Similarity=0.401 Sum_probs=200.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
..|.+.+.||+|+||.||++++..++..+|+|++.... .....+.+|+.+++.+ .|+|++++++++....
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~ 98 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI------KHPNSIEYKGCYLREH 98 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC------CCCCEEEEEEEEeeCC
Confidence 45788899999999999999999999999999987532 2234566677777766 4679999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 457 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 457 ~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
..++||||+.+++.+.+..... .+++..+..++.||+.||.|||+.||+||||+|+||+++. ++.++|+|||+
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~ 171 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 171 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCC
Confidence 9999999999988777654322 2788999999999999999999999999999999999984 78899999998
Q ss_pred cccccCCccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+..... .....+++.|+|||.+. ...++.++|+|||||++|+|++|..||........+..+.....+
T Consensus 172 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------- 242 (317)
T cd06635 172 ASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------- 242 (317)
T ss_pred ccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC--------
Confidence 765433 23356888999999984 456889999999999999999999999766544444433211000
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..+ ....+..+++||.+||+.+|.+||++.++++|+|+-.
T Consensus 243 --------------------------~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 243 --------------------------TLQ--------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred --------------------------CCC--------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 000 0012345789999999999999999999999999753
No 295
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-33 Score=294.30 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=196.6
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~-----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
.|++.+.||.|+||.||++++. .+|+.||+|+++... .......+|+++++.+. +|++|+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-----cCCChhceeeEee
Confidence 4889999999999999999874 478999999987532 22345667888888775 3679999999999
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.....++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.|++||||+|+|||++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~ 147 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLT 147 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEe
Confidence 99999999999985 6777665322 2788999999999999999999999999999999999984 7889999
Q ss_pred ecCCcccccCC----ccccccCccccChhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~----~~~~~gt~~Y~APE~l~~~--~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++...... .....++..|+|||.+... .++.++|+||||+++|+|++|..||...........+...+
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--- 224 (290)
T cd05613 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI--- 224 (290)
T ss_pred eCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh---
Confidence 99998764332 1234678899999998753 46789999999999999999999996432211111111000
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc-----CHHHHHc
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALD 681 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp-----Ta~ElL~ 681 (689)
. .....+| ...++.+.+||++||+.||.+|| ++++++.
T Consensus 225 ---------------~-------------~~~~~~~---------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 225 ---------------L-------------KSEPPYP---------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------------h-------------ccCCCCC---------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 0000011 11346688999999999999997 8999999
Q ss_pred CCCCCC
Q 005590 682 HPWLQH 687 (689)
Q Consensus 682 hpwf~~ 687 (689)
||||+.
T Consensus 268 ~~~~~~ 273 (290)
T cd05613 268 HPFFQK 273 (290)
T ss_pred Cccccc
Confidence 999985
No 296
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2e-33 Score=296.85 Aligned_cols=247 Identities=25% Similarity=0.401 Sum_probs=196.6
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
..+||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.++ |+||+++++.+...++.++||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC------CcchhheeeEEEeCCEEEEEEec
Confidence 357999999999999999999999999886432 23345677887777664 67999999999999999999999
Q ss_pred cccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.++ |.+++. .. .+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~-~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 99 LEGGALTDIVT-HT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceecccc
Confidence 9864 554432 11 2788999999999999999999999999999999999985 678999999987654322
Q ss_pred ---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 005590 544 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 620 (689)
Q Consensus 544 ---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~ 620 (689)
.....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+.........+...+.
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~---------------- 233 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------- 233 (292)
T ss_pred cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC----------------
Confidence 2234678899999999888899999999999999999999999987655544433321100
Q ss_pred hhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 621 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
..++ .....+..+.++|.+||+.+|.+||++.++|+||||.+.
T Consensus 234 ------------------~~~~-------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 234 ------------------PKLK-------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred ------------------cccC-------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence 0000 011234567899999999999999999999999999864
No 297
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.5e-33 Score=291.57 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=197.3
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~t-----g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
+..++|++.+.||+|+||.||++.+... +..||+|.+.... .....+.+|+.+++.+ .|+||+++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~ 76 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF------NCHHVVRLLG 76 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC------CCCceeEEEE
Confidence 3457899999999999999999987643 4789999986542 2234556677777665 4789999999
Q ss_pred EEEeCCeEEEEEEccc-cchHHHHhhhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC
Q 005590 451 YFYHLEHLFIVCELLR-ANLYEFQKFNQES----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 525 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~----~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~ 525 (689)
++......++||||+. ++|.+++...... .....+++..+..++.||+.||.|||+.+|+||||||+||+++.
T Consensus 77 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~-- 154 (277)
T cd05032 77 VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE-- 154 (277)
T ss_pred EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC--
Confidence 9999999999999997 5777776543211 11223778899999999999999999999999999999999985
Q ss_pred CCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHH
Q 005590 526 RCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 599 (689)
Q Consensus 526 ~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i 599 (689)
++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 234 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV 234 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 788999999998654322 122345778999999998889999999999999999998 99999876665544433
Q ss_pred HhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHH
Q 005590 600 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 679 (689)
Q Consensus 600 ~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~El 679 (689)
... .....|. ..+..+.+||.+||+.+|++|||+.++
T Consensus 235 ~~~----------------------------------~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~l 271 (277)
T cd05032 235 IDG----------------------------------GHLDLPE---------NCPDKLLELMRMCWQYNPKMRPTFLEI 271 (277)
T ss_pred hcC----------------------------------CCCCCCC---------CCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 200 0001111 113568899999999999999999999
Q ss_pred HcC
Q 005590 680 LDH 682 (689)
Q Consensus 680 L~h 682 (689)
++.
T Consensus 272 ~~~ 274 (277)
T cd05032 272 VSS 274 (277)
T ss_pred HHH
Confidence 863
No 298
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3e-33 Score=293.92 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=198.4
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~t-----g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
+-.++|++.+.||+|+||.||++.+... ...+|+|++.... .....+.+|+.+++.+. .|+||+++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~ 83 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG 83 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEE
Confidence 3357899999999999999999987643 3789999987542 23345677888888773 3789999999
Q ss_pred EEEeCCeEEEEEEccc-cchHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 005590 451 YFYHLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 519 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~-g~L~~l~~~~~~----------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NI 519 (689)
++......++||||+. ++|..++..... ......+++..+..++.||+.||.|||+.||+||||||+||
T Consensus 84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni 163 (293)
T cd05053 84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV 163 (293)
T ss_pred EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence 9999999999999997 477777653210 02233488999999999999999999999999999999999
Q ss_pred EEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHH
Q 005590 520 LIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVV 593 (689)
Q Consensus 520 Ll~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~ 593 (689)
+++. ++.+||+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus 164 l~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 164 LVTE--DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EEcC--CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9984 7889999999987654321 11234567999999998899999999999999999998 99999876655
Q ss_pred HHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCC
Q 005590 594 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR 673 (689)
Q Consensus 594 ~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR 673 (689)
+....+.... ....| ......+.+||.+||..||++|
T Consensus 242 ~~~~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~R 278 (293)
T cd05053 242 ELFKLLKEGY----------------------------------RMEKP---------QNCTQELYHLMRDCWHEVPSQR 278 (293)
T ss_pred HHHHHHHcCC----------------------------------cCCCC---------CCCCHHHHHHHHHHcccCcccC
Confidence 5444332100 00011 1123568899999999999999
Q ss_pred cCHHHHHcC
Q 005590 674 PTAREALDH 682 (689)
Q Consensus 674 pTa~ElL~h 682 (689)
||+.|++++
T Consensus 279 ps~~eil~~ 287 (293)
T cd05053 279 PTFKQLVED 287 (293)
T ss_pred cCHHHHHHH
Confidence 999999975
No 299
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.5e-33 Score=299.74 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=199.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+|.+.+.||+|+||.||+|++..+++.+|+|.+... ......+.+|+++++.++ |+|++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREH 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC------CCCcccEEEEEEcCC
Confidence 4577888999999999999999999999999998642 122345667777777764 679999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 457 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 457 ~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
..++||||+.+++.+++.... ..+++..+..++.|++.||.|||+.+++||||+|+||+++. ++.++|+|||+
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~ 161 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGS 161 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCccc
Confidence 999999999988877665332 22788999999999999999999999999999999999984 78899999999
Q ss_pred cccccCCccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+...... ....+++.|+|||.+. ...++.++|||||||++|+|++|..||......+....+...
T Consensus 162 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----------- 229 (308)
T cd06634 162 ASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----------- 229 (308)
T ss_pred ceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc-----------
Confidence 8765432 3356788999999985 345788999999999999999999999765443333222100
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
..|... ....+..+.+||++||+.+|++||++.++++|||+..
T Consensus 230 --------------------------~~~~~~-----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 230 --------------------------ESPALQ-----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred --------------------------CCCCcC-----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 000000 0112356889999999999999999999999999864
No 300
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-33 Score=299.60 Aligned_cols=246 Identities=21% Similarity=0.282 Sum_probs=190.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcE----EEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVD----VCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~----vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+|++.+.||+|+||+||+|++..+++. ||+|+++... .....+.+|+.+++.+ .|+||+++++++.
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~g~~~ 79 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DNPHVCRLLGICL 79 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCCCeEEEEEc
Confidence 36799999999999999999998666654 8999986432 2345666777777766 4789999999987
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.. ..++|+||+. |+|.+++..... .++...+..++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~--~~~~kl~ 151 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT--PQHVKIT 151 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC--CCcEEEc
Confidence 64 5678999987 567777764321 2788889999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccCCcc-----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++........ ....+..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+....+...
T Consensus 152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~---- 227 (316)
T cd05108 152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---- 227 (316)
T ss_pred cccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC----
Confidence 9999976543221 1223567999999999999999999999999999998 99999876554433222100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...|.. ...+..+.++|.+||..||.+|||+.+++.+
T Consensus 228 --------------------------------~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 228 --------------------------------ERLPQP-------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------------------------CCCCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000100 0123457899999999999999999999875
No 301
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.1e-33 Score=287.18 Aligned_cols=243 Identities=21% Similarity=0.332 Sum_probs=194.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-eCCeEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLF 459 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~-~~~~l~ 459 (689)
.+|++.+.||+|+||.||++.. .|..+|+|.+..+.. ...+.+|+.+++.++ |++++++++++. .....+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch-HHHHHHHHHHHHhCC------CCCeeeEEEEEEcCCCceE
Confidence 5799999999999999999975 488899999876543 356778888888774 679999999765 456789
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 460 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 460 lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
+||||+.+ +|.+++..... ..+++..+..++.||+.||+|||+.|++||||||+||+++. ++.+||+|||++.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~ 150 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE--DNVAKVSDFGLTK 150 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC--CCcEEecCCccce
Confidence 99999984 78777654322 23788999999999999999999999999999999999984 7889999999987
Q ss_pred cccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 539 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 539 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
...........+..|+|||++.+..++.++|||||||++|+|++ |+.||...........+....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05082 151 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------------- 216 (256)
T ss_pred eccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 65443334445678999999998889999999999999999998 999998765555444332100
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...++.+.++|.+||+.+|++|||+.++++
T Consensus 217 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 --------------------KMDAP---------DGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred --------------------CCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00001 122456889999999999999999999975
No 302
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1e-33 Score=305.41 Aligned_cols=255 Identities=24% Similarity=0.332 Sum_probs=193.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~-----~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
-.++|++.+.||+|+||.||+|.+. .+++.||+|+++... .....+.+|+.+++.+. +|+||++++++
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~ 79 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGA 79 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeee
Confidence 3468999999999999999999743 345789999987532 23355677888888773 37899999998
Q ss_pred EEeC-CeEEEEEEcccc-chHHHHhhhhcc--------------------------------------------------
Q 005590 452 FYHL-EHLFIVCELLRA-NLYEFQKFNQES-------------------------------------------------- 479 (689)
Q Consensus 452 f~~~-~~l~lVmEy~~g-~L~~l~~~~~~~-------------------------------------------------- 479 (689)
+... ..+++||||+.+ +|.+++......
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 8754 578999999985 677666432210
Q ss_pred -----CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc-----ccccc
Q 005590 480 -----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQ 549 (689)
Q Consensus 480 -----~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~g 549 (689)
.....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++....... ....+
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCC
Confidence 00124788899999999999999999999999999999999984 7789999999987643221 12344
Q ss_pred CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccch
Q 005590 550 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLY 628 (689)
Q Consensus 550 t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~ 628 (689)
+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+..
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-------------------------- 291 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-------------------------- 291 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc--------------------------
Confidence 678999999999999999999999999999998 99999764332222211100
Q ss_pred hhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 629 YINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 629 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
......|. ...+.+.+++.+||+.+|++||++.|+++|
T Consensus 292 -------~~~~~~~~---------~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 292 -------GTRMRAPE---------YATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred -------cCCCCCCc---------cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00001111 123568899999999999999999999976
No 303
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.9e-33 Score=286.81 Aligned_cols=245 Identities=24% Similarity=0.366 Sum_probs=196.5
Q ss_pred EEeccCCCCceEEEEECCC---CcEEEEEEeecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~t---g~~vAvKii~~~~~~--~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
+.||+|+||.||+|.+... +..+++|++...... ...+.+|+++++.++ |+||+++++++......++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG------HPNVVRLLGVCTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC------CCChheeeeeecCCCceEEE
Confidence 3689999999999998765 899999999875432 466777888887774 67999999999999999999
Q ss_pred EEccc-cchHHHHhhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 462 CELLR-ANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 462 mEy~~-g~L~~l~~~~~~~---~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
|||+. ++|.+++...... .....+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||.+
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~ 152 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLS 152 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccc
Confidence 99995 6788776643211 01233899999999999999999999999999999999999995 688999999998
Q ss_pred ccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 538 CFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 538 ~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
...... .....++..|+|||.+....++.++|+|||||++|+|++ |..||......+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 765432 223456788999999998889999999999999999999 69999887665555444310
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.....|. ..+.++.++|.+||+.||++|||+.|++++
T Consensus 224 -------------------------~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------------------------YRLPKPE---------YCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------------------------CCCCCCc---------cCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0001111 124568899999999999999999999975
No 304
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.5e-33 Score=286.60 Aligned_cols=239 Identities=32% Similarity=0.503 Sum_probs=196.9
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
||.|+||.||++.+..+++.+|+|++..... ....+..|+.+++.++ |++|+++++.+......++||||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN------HPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC------CCcHHHHHHHeecCCeeEEEEec
Confidence 6999999999999988999999999876432 3456777888887775 67999999999999999999999
Q ss_pred cc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+. ++|.+++.... .+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||.+......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 75 APGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccC
Confidence 95 67877775432 2889999999999999999999999999999999999985 778999999998765432
Q ss_pred ---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 005590 544 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 620 (689)
Q Consensus 544 ---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~ 620 (689)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+...
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------------------ 208 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD------------------ 208 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC------------------
Confidence 33456788999999999888999999999999999999999999776654444433210
Q ss_pred hhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH---HHHHcCCCC
Q 005590 621 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA---REALDHPWL 685 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa---~ElL~hpwf 685 (689)
...+|. ..+..+.+||++||..||++|||+ .++++||||
T Consensus 209 -----------------~~~~~~---------~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 209 -----------------PLRFPE---------FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -----------------CCCCCC---------CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 011111 114567899999999999999999 999999998
No 305
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.6e-33 Score=327.48 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=194.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.++||+|+||.||+|++..+|+.||+|++..+. ....++.+|+++++.++ ||||+++++++...+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~------HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI------HPGIVPVYSICSDGD 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC------CcCcCeEEEEEeeCC
Confidence 68999999999999999999999999999999987532 23456777888887774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQES-----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~-----~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
..++||||+.| +|.+++...... .....++...+..++.||+.||.|||+.||+||||||+|||++. ++.++
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~--dg~vK 153 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL--FGEVV 153 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC--CCCEE
Confidence 99999999985 677766432110 11123566778899999999999999999999999999999984 78899
Q ss_pred EEecCCcccccC---------------------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005590 531 IIDLGSSCFQTD---------------------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 589 (689)
Q Consensus 531 L~DFGls~~~~~---------------------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~ 589 (689)
|+|||++..... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999875411 01124689999999999999999999999999999999999999976
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccC
Q 005590 590 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 669 (689)
Q Consensus 590 ~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~d 669 (689)
........... .. .|.. . ......++.+.+++.+||+.|
T Consensus 234 ~~~~ki~~~~~--i~------------------------------------~P~~--~-~p~~~iP~~L~~LI~rcL~~D 272 (932)
T PRK13184 234 KKGRKISYRDV--IL------------------------------------SPIE--V-APYREIPPFLSQIAMKALAVD 272 (932)
T ss_pred cchhhhhhhhh--cc------------------------------------Chhh--c-cccccCCHHHHHHHHHHccCC
Confidence 43322211100 00 0000 0 001123456889999999999
Q ss_pred CCCCcCHHHHHc
Q 005590 670 PQRRPTAREALD 681 (689)
Q Consensus 670 P~kRpTa~ElL~ 681 (689)
|++|++..+.|.
T Consensus 273 P~kR~ss~eeLl 284 (932)
T PRK13184 273 PAERYSSVQELK 284 (932)
T ss_pred hhhCcCHHHHHH
Confidence 999988766553
No 306
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2e-33 Score=290.84 Aligned_cols=249 Identities=27% Similarity=0.381 Sum_probs=195.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||++++..+++.+|||.+... ......+.+|+.+++.+. |+||+++++++...+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN------HPNVIKYYASFIEDN 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc------CCchhhhhheeEeCC
Confidence 4688999999999999999999999999999987642 223356667888877764 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+.+ +|.+++..... ....+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg 151 (267)
T cd08229 76 ELNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcch
Confidence 99999999985 67776654322 2234889999999999999999999999999999999999984 7789999999
Q ss_pred CcccccCCc---cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH--HHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV--MILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~--~~l~~i~~~~g~~~~e~ 610 (689)
++....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+.... .....+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 223 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-------- 223 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--------
Confidence 887654322 2346888999999999888999999999999999999999999654321 111111100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..+... ....+..+.+||.+||+.||++|||+.++++
T Consensus 224 -----------------------------~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 224 -----------------------------DYPPLP-----SDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred -----------------------------CCCCCC-----cccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000000 0123457899999999999999999998764
No 307
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6e-33 Score=287.53 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=196.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~------~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+|++.+.||+|+||.||++++..+++.+|+|++..+ ......+.+|+.+++.++ |+||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~ 75 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR------HDRIVQYYGCLRD 75 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC------CCCcceEEEEEEc
Confidence 4799999999999999999999999999999987542 123346677888888774 6799999999876
Q ss_pred C--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 455 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 455 ~--~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
. ..+++||||+.+ +|.+.+.... .+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l 147 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEE
Confidence 4 468999999975 6766664321 2788889999999999999999999999999999999984 778999
Q ss_pred EecCCcccccC------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 532 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 532 ~DFGls~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
+|||++..... ......++..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+. ..
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~ 224 (264)
T cd06653 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQ 224 (264)
T ss_pred CccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cC
Confidence 99999875432 1123467889999999999889999999999999999999999997654443332221 00
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.....+| ......+.++|++||+ +|.+|||+.+++.|||.
T Consensus 225 ------------------------------~~~~~~p---------~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 225 ------------------------------PTKPMLP---------DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ------------------------------CCCCCCC---------cccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 0001111 1234568899999999 57999999999999995
No 308
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.6e-33 Score=294.64 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=196.3
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
.+..++|.+.+.||+|+||.||++.+ ..++..+|+|+++... .....+.+|+.+++.+. +|+||++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 105 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLL 105 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEE
Confidence 34557899999999999999999975 3345689999987542 23456778888888773 378999999
Q ss_pred EEEEeCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 450 DYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
+++...+..++||||+. ++|.+++..... ..+++..+..++.||+.||.|||+.+|+|+||||+|||++ .++.
T Consensus 106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~--~~~~ 179 (302)
T cd05055 106 GACTIGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT--HGKI 179 (302)
T ss_pred EEEecCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc--CCCe
Confidence 99999999999999998 577777653221 2278999999999999999999999999999999999998 4778
Q ss_pred EEEEecCCcccccCCcc-----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 005590 529 IKIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 529 vkL~DFGls~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~ 602 (689)
++|+|||++........ ...++..|+|||.+.+..++.++||||+||++|+|++ |..||......+.+.++...
T Consensus 180 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~ 259 (302)
T cd05055 180 VKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259 (302)
T ss_pred EEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc
Confidence 99999999875432211 1234678999999999899999999999999999998 99999765443332222100
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......+ ...+..+.+||.+||..+|++|||+.|+++
T Consensus 260 ---------------------------------~~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 260 ---------------------------------GYRMAQP---------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------------------------CCcCCCC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0000001 112456889999999999999999999985
No 309
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.9e-33 Score=296.32 Aligned_cols=274 Identities=23% Similarity=0.270 Sum_probs=190.0
Q ss_pred CCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcccc-c
Q 005590 393 AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-N 468 (689)
Q Consensus 393 ~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g-~ 468 (689)
+++.||++++..+++.||||++... ......+.+|+.+++.++ |+||+++++++...+..+++|||+.+ +
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ------HPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC------CcchhhhhheeecCCeEEEEEeccCCCC
Confidence 5567788887789999999998754 334467778888888774 68999999999999999999999985 5
Q ss_pred hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC-----
Q 005590 469 LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----- 543 (689)
Q Consensus 469 L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~----- 543 (689)
+.+++...... .+++..+..++.||+.||.|||+.+|+||||||+||+++. ++.++|+|||.+......
T Consensus 86 l~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeecccccccc
Confidence 66666533211 2788999999999999999999999999999999999984 788999999987543211
Q ss_pred -----ccccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 005590 544 -----LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 616 (689)
Q Consensus 544 -----~~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~ 616 (689)
.....++..|+|||++.. ..++.++|+||+||++|+|++|..||........+.... .+..+.. +.....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~-~~~~~~ 236 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV--RGTVPCL-LDKSTY 236 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCccc-cccCch
Confidence 122356778999999876 358899999999999999999999998754443322211 1111100 000000
Q ss_pred hhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 617 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
... ....... . ....................+..+.+||++||++||++|||+.++|+||||+.-
T Consensus 237 ~~~----~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 237 PLY----EDSMSQS--R-SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred hhh----cCCcCcc--c-ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 000 0000000 0 000000000000000111224568899999999999999999999999999753
No 310
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9e-33 Score=284.09 Aligned_cols=245 Identities=20% Similarity=0.339 Sum_probs=195.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
.+|++.+.||.|+||.||++.+. .+..+|+|++.........+.+|+++++.+. |++|+++++++......++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS------HPKLVQLYGVCTERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC------CCCeeeEEEEEccCCceEE
Confidence 47899999999999999999875 4778999998765544567888999888874 6799999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+++|+||||+||+++. ++.++|+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~ 149 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE--NQVVKVSDFGMTRF 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC--CCeEEECCCcceee
Confidence 9999986 5655554322 12788899999999999999999999999999999999984 77899999999875
Q ss_pred ccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 540 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 540 ~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...........+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF----------- 218 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----------
Confidence 433211 1234568999999998889999999999999999998 999998766555444432110
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....|. ..+..+.+|+.+||+.+|++|||+.+++++
T Consensus 219 -----------------------~~~~~~---------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 -----------------------RLYKPR---------LASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----------------------CCCCCC---------CCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 000111 123568899999999999999999999874
No 311
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.3e-33 Score=287.96 Aligned_cols=246 Identities=21% Similarity=0.288 Sum_probs=194.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~t---g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
++|++.+.||+|+||+||+|.+... ...||+|+++... .....+.+|+.+++.++ |+||+++++.+...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 77 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD------HPNIIRLEGVVTKS 77 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC------CCCcceEeEEEecC
Confidence 5799999999999999999988644 4579999987542 23345677888877764 67999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+..++||||+.+ +|.+++..... .+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|+||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~--~~~~~l~df 150 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCCEEECcc
Confidence 999999999985 67777654321 3889999999999999999999999999999999999984 788999999
Q ss_pred CCcccccCCc---c--ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 535 GSSCFQTDNL---C--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 535 Gls~~~~~~~---~--~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
|++....... . ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||......+....+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---- 226 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR---- 226 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----
Confidence 9987654211 1 1233567999999998899999999999999999998 9999976655554444321100
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...+ ...+..+.+|+.+||+.+|++||++.|++++
T Consensus 227 ------------------------------~~~~---------~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 227 ------------------------------LPPP---------MDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------------------------CCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0001 1123568899999999999999999999875
No 312
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.2e-32 Score=284.27 Aligned_cols=249 Identities=28% Similarity=0.372 Sum_probs=196.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.. ......+.+|+++++.++ |++|+++++++...+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~------~~~i~~~~~~~~~~~ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD------HPNVIKYLASFIENN 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC------CCCeeeeeeeeecCC
Confidence 5899999999999999999999989999999988642 223456778888888774 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+.+ +|.+++..... ....+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~--~~~~~l~d~~ 151 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC--CCcEEEeccc
Confidence 99999999985 77777654322 2233889999999999999999999999999999999999984 7789999999
Q ss_pred CcccccCC---ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~--~~~l~~i~~~~g~~~~e~ 610 (689)
++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||..... ......+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 222 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK--------- 222 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc---------
Confidence 98654332 2234678899999999998899999999999999999999999965421 111111110
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......|. ...+..+.++|.+||..+|++|||+.++++
T Consensus 223 -------------------------~~~~~~~~--------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 223 -------------------------CDYPPLPA--------DHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred -------------------------CCCCCCCh--------hhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00000110 012356789999999999999999999875
No 313
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-32 Score=293.82 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=196.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECC-------CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~-------tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
-.++|.+.++||+|+||.||++++.. ....+|+|++.... .....+..|+.+++.+. .|+||++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 84 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLL 84 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEE
Confidence 34789999999999999999998632 34579999987532 23456677888887763 378999999
Q ss_pred EEEEeCCeEEEEEEccc-cchHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 005590 450 DYFYHLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPEN 518 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~----------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~N 518 (689)
+++......++||||+. ++|.+++..... ......++...+..++.||+.||.|||+.||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999998 478777754321 1122348889999999999999999999999999999999
Q ss_pred EEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChH
Q 005590 519 ILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAV 592 (689)
Q Consensus 519 ILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~ 592 (689)
||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 165 ill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 165 VLVTE--DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEEcC--CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99984 7789999999987543221 11223457999999999889999999999999999999 8999987766
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCC
Q 005590 593 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 672 (689)
Q Consensus 593 ~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~k 672 (689)
.+....+.... ....+ ...+..+++||.+||..||++
T Consensus 243 ~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~l~~li~~cl~~~p~~ 279 (314)
T cd05099 243 EELFKLLREGH----------------------------------RMDKP---------SNCTHELYMLMRECWHAVPTQ 279 (314)
T ss_pred HHHHHHHHcCC----------------------------------CCCCC---------CCCCHHHHHHHHHHcCCCccc
Confidence 65554432100 00011 012346889999999999999
Q ss_pred CcCHHHHHc
Q 005590 673 RPTAREALD 681 (689)
Q Consensus 673 RpTa~ElL~ 681 (689)
|||+.++++
T Consensus 280 Rps~~~ll~ 288 (314)
T cd05099 280 RPTFKQLVE 288 (314)
T ss_pred CcCHHHHHH
Confidence 999999886
No 314
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1e-32 Score=285.17 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=196.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++..++|++.+.||+|+||.||++.+. .+..+|+|.+.........+.+|+.+++.++ |+||+++++.+.. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~-~ 73 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ------HDKLVKLHAVVTK-E 73 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC------CCCcceEEEEEcC-C
Confidence 456789999999999999999999854 4567999998876555567788988888775 6789999999887 7
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..++||||+. ++|.+++.... ...++...+..++.||+.||.|||+.|++|+||||+||+++. .+.++|+|||
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~ 147 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFG 147 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCCc
Confidence 8899999997 57877775422 223778889999999999999999999999999999999984 7889999999
Q ss_pred CcccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
.+........ ...++..|+|||++....++.++|+|||||++|+|++ |..||.+.+.......+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~------- 220 (260)
T cd05073 148 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------- 220 (260)
T ss_pred ceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-------
Confidence 8865433211 1234567999999998889999999999999999999 999998765554443332100
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..+.. ...+..+.+++.+||+.+|++||++.++++
T Consensus 221 -----------------------------~~~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 221 -----------------------------RMPRP-------ENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -----------------------------CCCCc-------ccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00000 122356889999999999999999999874
No 315
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-33 Score=297.56 Aligned_cols=256 Identities=23% Similarity=0.335 Sum_probs=198.9
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCC-------CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHT-------GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILR 447 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~t-------g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~ 447 (689)
++...+|++.+.||+|+||.||+|++... +..+|+|+++... .....+.+|+.+++.+. .|+||++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~ 82 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-----KHKNIIN 82 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-----CCCCeee
Confidence 44557899999999999999999986432 2368999887532 23457778888888774 3689999
Q ss_pred EEEEEEeCCeEEEEEEcccc-chHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 448 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 448 l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~----------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
+++++...+..++||||+.+ +|.+++..... ......++...+..++.||+.||.|||+.||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999975 78877764321 11233478888999999999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 590 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~ 590 (689)
+|||++. ++.+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 163 ~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 163 RNVLVTE--DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ceEEEcC--CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 9999984 7789999999987544321 11223467999999999999999999999999999998 89999877
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCC
Q 005590 591 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 670 (689)
Q Consensus 591 ~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP 670 (689)
+..+....+.... ....+. .....+.+||.+||+.+|
T Consensus 241 ~~~~~~~~~~~~~----------------------------------~~~~~~---------~~~~~l~~li~~cl~~~p 277 (334)
T cd05100 241 PVEELFKLLKEGH----------------------------------RMDKPA---------NCTHELYMIMRECWHAVP 277 (334)
T ss_pred CHHHHHHHHHcCC----------------------------------CCCCCC---------CCCHHHHHHHHHHcccCh
Confidence 6655544432100 000111 123468899999999999
Q ss_pred CCCcCHHHHHcC
Q 005590 671 QRRPTAREALDH 682 (689)
Q Consensus 671 ~kRpTa~ElL~h 682 (689)
.+|||+.|++++
T Consensus 278 ~~Rps~~ell~~ 289 (334)
T cd05100 278 SQRPTFKQLVED 289 (334)
T ss_pred hhCcCHHHHHHH
Confidence 999999999875
No 316
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=308.91 Aligned_cols=234 Identities=29% Similarity=0.413 Sum_probs=190.6
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcc
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 465 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~ 465 (689)
++-||.|+.|.||+++ -.++.||||.++.-+ ..+|+-|++| +|+||+.+.+++...-.+|||||||
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~elk------ETdIKHLRkL------kH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRELK------ETDIKHLRKL------KHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhhh------hhhHHHHHhc------cCcceeeEeeeecCCceeEEeeecc
Confidence 4559999999999998 468999999886322 2455556655 5789999999999999999999999
Q ss_pred c-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc
Q 005590 466 R-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 544 (689)
Q Consensus 466 ~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~ 544 (689)
. |-|++.++..+. ++...+..+..+|+.|+.|||...|||||||.-||||.. +..|||+|||.++...+..
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY--DDVVKISDFGTSKELSDKS 266 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec--cceEEeccccchHhhhhhh
Confidence 8 568887765443 888899999999999999999999999999999999995 6679999999998776653
Q ss_pred c--ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhh
Q 005590 545 C--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 622 (689)
Q Consensus 545 ~--~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~ 622 (689)
+ .++||..|||||++.+.+.+.++|||||||+|||||||..||.+-+...++
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII-------------------------- 320 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII-------------------------- 320 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE--------------------------
Confidence 3 479999999999999999999999999999999999999999765433221
Q ss_pred ccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCC
Q 005590 623 KEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 683 (689)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hp 683 (689)
+......+....|.. .+.-|+=||+.||+..|..||+..++|.|-
T Consensus 321 -------wGVGsNsL~LpvPst---------cP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 321 -------WGVGSNSLHLPVPST---------CPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred -------EeccCCcccccCccc---------CchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 011122333333321 224478899999999999999999999983
No 317
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-32 Score=288.18 Aligned_cols=245 Identities=22% Similarity=0.272 Sum_probs=189.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+|+++++||+|+||+||+|++..+++ .||+|+++.. ......+.+|+.+++.+ .|+||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV------GSPYVCRLLGICL 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc------CCCCCceEEEEEc
Confidence 4689999999999999999999877766 4899998753 22334566677666655 4789999999887
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
. ...+++|||+. |+|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~--~~~~kL~ 151 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS--PNHVKIT 151 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEEC
Confidence 5 45778999998 57777765322 23889999999999999999999999999999999999974 6789999
Q ss_pred ecCCcccccCCccc-----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++......... ..+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+....
T Consensus 152 dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~--- 228 (279)
T cd05109 152 DFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE--- 228 (279)
T ss_pred CCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---
Confidence 99998765432211 123567999999999899999999999999999998 999997655444333221100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.++|.+||..||++||++.++++
T Consensus 229 -------------------------------~~~~~---------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 229 -------------------------------RLPQP---------PICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -------------------------------cCCCC---------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00000 012356789999999999999999999985
No 318
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=310.54 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=200.8
Q ss_pred eeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 373 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 373 i~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
...+++..+...+.+.||+|.||+||+|++.. .||||+++.+ ....+.+++|+.++++-+ |.||+-+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR------H~NIlLFM 454 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR------HENILLFM 454 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc------hhhheeee
Confidence 35667777888999999999999999999754 4999999864 446678889999999886 56899999
Q ss_pred EEEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 450 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
+++..... .||+-+|+| +|+..+..... .|.....+.|++||++|+.|||.++|||||||..||++.. +++
T Consensus 455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~et-----kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~--~~k 526 (678)
T KOG0193|consen 455 GACMNPPL-AIITQWCEGSSLYTHLHVQET-----KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE--DLK 526 (678)
T ss_pred hhhcCCce-eeeehhccCchhhhhccchhh-----hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc--CCc
Confidence 99988887 999999998 57777664432 2889999999999999999999999999999999999994 699
Q ss_pred EEEEecCCcccccC-----CccccccCccccChhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 005590 529 IKIIDLGSSCFQTD-----NLCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 600 (689)
Q Consensus 529 vkL~DFGls~~~~~-----~~~~~~gt~~Y~APE~l~~---~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~ 600 (689)
|||+|||++..... +.....|...|||||++.. .+|+..+||||+||++|||++|..||...+...++-.+-
T Consensus 527 VkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG 606 (678)
T KOG0193|consen 527 VKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG 606 (678)
T ss_pred EEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec
Confidence 99999999865332 2334566778999999974 479999999999999999999999998554444332221
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
+ .|..|. +.........++++|+..||..++++||+..+||
T Consensus 607 r------------------------------------G~l~pd---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il 647 (678)
T KOG0193|consen 607 R------------------------------------GYLMPD---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLL 647 (678)
T ss_pred c------------------------------------cccCcc---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHH
Confidence 0 011111 1111122345799999999999999999999988
Q ss_pred c
Q 005590 681 D 681 (689)
Q Consensus 681 ~ 681 (689)
.
T Consensus 648 ~ 648 (678)
T KOG0193|consen 648 S 648 (678)
T ss_pred H
Confidence 6
No 319
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-33 Score=292.85 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=194.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~t-----g~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
.+|++.+.||+|+||.||+|.+..+ ++.||||++..... ....+.+|+.++..+ .|+||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL------QHPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEc
Confidence 4678889999999999999987543 57899999975432 234556677666655 4789999999999
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 522 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~----------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~ 522 (689)
.....++++||+.+ +|.+++..... ......+++..+..++.|++.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 99999999999984 67666642211 11123478888999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 005590 523 SYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 596 (689)
Q Consensus 523 ~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l 596 (689)
. ++.+||+|||+++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+....+.+
T Consensus 159 ~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 D--KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred C--CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4 7789999999887543221 12345678999999998889999999999999999998 88999887666655
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH
Q 005590 597 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 676 (689)
Q Consensus 597 ~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa 676 (689)
..+..... ..+| ...+..+.+|+.+||+.+|.+||++
T Consensus 237 ~~i~~~~~----------------------------------~~~~---------~~~~~~~~~li~~cl~~~p~~RP~~ 273 (283)
T cd05091 237 EMIRNRQV----------------------------------LPCP---------DDCPAWVYTLMLECWNEFPSRRPRF 273 (283)
T ss_pred HHHHcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHhCCCcccCCCH
Confidence 55431100 0011 1124567899999999999999999
Q ss_pred HHHHcC
Q 005590 677 REALDH 682 (689)
Q Consensus 677 ~ElL~h 682 (689)
+++++.
T Consensus 274 ~~i~~~ 279 (283)
T cd05091 274 KDIHSR 279 (283)
T ss_pred HHHHHH
Confidence 999864
No 320
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.8e-33 Score=290.99 Aligned_cols=258 Identities=21% Similarity=0.249 Sum_probs=197.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCC----------------cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTG----------------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 441 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg----------------~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~ 441 (689)
.++|++.+.||+|+||.||+|.+..++ ..||+|++..+. .....+.+|+++++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------ 77 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS------ 77 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC------
Confidence 368999999999999999999876544 558999987643 34456778888888774
Q ss_pred CCceeEEEEEEEeCCeEEEEEEcccc-chHHHHhhhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 005590 442 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES-----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 515 (689)
Q Consensus 442 h~~Iv~l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~-----~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLK 515 (689)
|+||+++++++......++||||+.+ +|.+++...... .....+++..++.++.|++.||.|||+.||+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 67999999999999999999999985 677766543210 111248899999999999999999999999999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 588 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt--G~~PF~ 588 (689)
|+||+++. ++.++|+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ +..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 158 TRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred hhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999985 688999999998754322 122345678999999998889999999999999999998 788887
Q ss_pred CChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhccc
Q 005590 589 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 668 (689)
Q Consensus 589 ~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~ 668 (689)
.....+.+..+....... ......+.. ...+.++.+||.+||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~-------~~~~~~l~~li~~cl~~ 279 (296)
T cd05051 236 HLTDQQVIENAGHFFRDD-----------------------------GRQIYLPRP-------PNCPKDIYELMLECWRR 279 (296)
T ss_pred CcChHHHHHHHHhccccc-----------------------------cccccCCCc-------cCCCHHHHHHHHHHhcc
Confidence 665555444432111000 000000100 11235689999999999
Q ss_pred CCCCCcCHHHHHc
Q 005590 669 NPQRRPTAREALD 681 (689)
Q Consensus 669 dP~kRpTa~ElL~ 681 (689)
||++|||+.|+++
T Consensus 280 ~p~~Rpt~~el~~ 292 (296)
T cd05051 280 DEEDRPTFREIHL 292 (296)
T ss_pred ChhcCCCHHHHHH
Confidence 9999999999965
No 321
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-34 Score=313.41 Aligned_cols=250 Identities=27% Similarity=0.479 Sum_probs=206.2
Q ss_pred CcEEE-EEEeccCCCCceEEEEECCCCcEEEEEEee-----cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYV-TEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-----NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i-~~~LG~G~fG~Vyla~d~~tg~~vAvKii~-----~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+||-. .+.||+|+|-+||+|.|..+|..||--.++ +......++..|+.+|+.|+ |+||+++|+++.+
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~------H~NIirfy~SW~d 112 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK------HPNIIRFYDSWVD 112 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC------CCceeeeeeheec
Confidence 45533 357999999999999999999988733322 33445578889999999875 6799999999997
Q ss_pred CCe--EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEeccCCCeE
Q 005590 455 LEH--LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 455 ~~~--l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g--IvHrDLKp~NILl~~~~~~~v 529 (689)
... +.+|+|.+. |+|..|.+..+. +..+.++.|++||++||.|||++. |||||||-+||+|+. ..|.|
T Consensus 113 ~~n~~in~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~V 185 (632)
T KOG0584|consen 113 TDNKTINFITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEV 185 (632)
T ss_pred CCCceeeeeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCce
Confidence 654 889999998 788888876655 778899999999999999999985 999999999999986 68999
Q ss_pred EEEecCCcccccCCccc-cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCc
Q 005590 530 KIIDLGSSCFQTDNLCL-YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPID 607 (689)
Q Consensus 530 kL~DFGls~~~~~~~~~-~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~-~~~~~~l~~i~~~~g~~~ 607 (689)
||+|+|+|......... .+|||.|||||++. ..|...+||||||+.|.||.|+..||.. .++..++.+++..+.|
T Consensus 186 KIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP-- 262 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP-- 262 (632)
T ss_pred eecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH--
Confidence 99999999887765443 68999999999998 6799999999999999999999999965 4555555555422221
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
. ...+..+++.++||.+||.. .+.|+|+.|||+||||+.
T Consensus 263 -----------------------------------~-----sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 263 -----------------------------------A-----ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred -----------------------------------H-----HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 1 11234468899999999999 999999999999999975
No 322
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1e-32 Score=290.01 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=193.0
Q ss_pred cEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+|++.+.||+|+||.||+|++.. ....+++|.+.... .....+.+|+.+++.+ .||||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV------NHPHVIKLYGACSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC------CCCCEeeEEEEEec
Confidence 47889999999999999998743 23568999887543 2335677788888766 47899999999999
Q ss_pred CCeEEEEEEccc-cchHHHHhhhhcc------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 005590 455 LEHLFIVCELLR-ANLYEFQKFNQES------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 515 (689)
Q Consensus 455 ~~~l~lVmEy~~-g~L~~l~~~~~~~------------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLK 515 (689)
.+..++||||+. ++|.+++...... .....+++..+..++.|++.||.|||+.||+|||||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 999999999998 5677766532211 112347888999999999999999999999999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 589 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~ 589 (689)
|+|||++. ++.++|+|||++....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+
T Consensus 155 p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE--GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC--CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999984 7789999999987543221 12244678999999998889999999999999999998 9999987
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccC
Q 005590 590 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 669 (689)
Q Consensus 590 ~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~d 669 (689)
.....+...+... .....| ...+..+.+||.+||+.+
T Consensus 233 ~~~~~~~~~~~~~----------------------------------~~~~~~---------~~~~~~~~~~i~~cl~~~ 269 (290)
T cd05045 233 IAPERLFNLLKTG----------------------------------YRMERP---------ENCSEEMYNLMLTCWKQE 269 (290)
T ss_pred CCHHHHHHHHhCC----------------------------------CCCCCC---------CCCCHHHHHHHHHHccCC
Confidence 6555444332110 000011 122356889999999999
Q ss_pred CCCCcCHHHHHc
Q 005590 670 PQRRPTAREALD 681 (689)
Q Consensus 670 P~kRpTa~ElL~ 681 (689)
|++||++.|+++
T Consensus 270 P~~Rp~~~~i~~ 281 (290)
T cd05045 270 PDKRPTFADISK 281 (290)
T ss_pred cccCCCHHHHHH
Confidence 999999999985
No 323
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-32 Score=290.04 Aligned_cols=250 Identities=23% Similarity=0.286 Sum_probs=194.9
Q ss_pred CcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~-----~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+|.+.+.||+|+||.||++++. .++..+++|.+..... ....+.+|+.+++.+ .|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~ 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL------QHEHIVKFYGVCGD 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC------CCCCcceEEEEEcc
Confidence 57999999999999999999853 3456689998875432 234566777777766 46899999999999
Q ss_pred CCeEEEEEEccc-cchHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 005590 455 LEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 523 (689)
Q Consensus 455 ~~~l~lVmEy~~-g~L~~l~~~~~~----------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~ 523 (689)
....++||||+. ++|.+++..... ......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999997 578777754321 011234888999999999999999999999999999999999985
Q ss_pred cCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 005590 524 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 597 (689)
Q Consensus 524 ~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~ 597 (689)
++.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+.+.
T Consensus 159 --~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 --NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred --CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 7889999999987543321 22345778999999999999999999999999999999 999997766555443
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
.+..... ...+ ...+..+.+||.+||+.||++|||+.
T Consensus 237 ~~~~~~~----------------------------------~~~~---------~~~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 237 CITQGRV----------------------------------LERP---------RVCPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred HHhCCCC----------------------------------CCCC---------ccCCHHHHHHHHHHcccChhhCcCHH
Confidence 3321000 0000 11235688999999999999999999
Q ss_pred HHHc
Q 005590 678 EALD 681 (689)
Q Consensus 678 ElL~ 681 (689)
++++
T Consensus 274 ~v~~ 277 (291)
T cd05094 274 EIYK 277 (291)
T ss_pred HHHH
Confidence 9975
No 324
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.4e-33 Score=305.66 Aligned_cols=253 Identities=22% Similarity=0.305 Sum_probs=193.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~t-----g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.++|++.++||+|+||.||+|.+... +..||||+++... .....+.+|+.+++.+. .||||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence 46899999999999999999987433 3479999997532 23456778999888774 378999999999
Q ss_pred EeCCeEEEEEEccc-cchHHHHhhhhcc----------------------------------------------------
Q 005590 453 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 479 (689)
Q Consensus 453 ~~~~~l~lVmEy~~-g~L~~l~~~~~~~---------------------------------------------------- 479 (689)
......++||||+. |+|.+++......
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999998 5777766543210
Q ss_pred --------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 005590 480 --------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 521 (689)
Q Consensus 480 --------------------------------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl 521 (689)
.....+++..+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 001237788889999999999999999999999999999999
Q ss_pred eccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHH
Q 005590 522 KSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMI 595 (689)
Q Consensus 522 ~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~ 595 (689)
+. ++.+||+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 271 ~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 271 AQ--GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred eC--CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 85 7789999999987543221 12345678999999999899999999999999999997 9999976432222
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 675 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT 675 (689)
+...+.. ......+ ...+..+.+||.+||+.||++|||
T Consensus 349 ~~~~~~~---------------------------------~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPt 386 (400)
T cd05105 349 FYNKIKS---------------------------------GYRMAKP---------DHATQEVYDIMVKCWNSEPEKRPS 386 (400)
T ss_pred HHHHHhc---------------------------------CCCCCCC---------ccCCHHHHHHHHHHCccCHhHCcC
Confidence 2111100 0000011 112456889999999999999999
Q ss_pred HHHHHc
Q 005590 676 AREALD 681 (689)
Q Consensus 676 a~ElL~ 681 (689)
+.++.+
T Consensus 387 ~~~l~~ 392 (400)
T cd05105 387 FLHLSD 392 (400)
T ss_pred HHHHHH
Confidence 999875
No 325
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-32 Score=291.71 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=199.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEEC-------CCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILR 447 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~-------~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~ 447 (689)
.+..++|.+.+.||+|+||.||+|++. ..+..+|+|++... ......+.+|+.+++.+. .|+||++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~ 85 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIIN 85 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchh
Confidence 345688999999999999999999752 23457999998753 233456778888888774 3789999
Q ss_pred EEEEEEeCCeEEEEEEcccc-chHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 448 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 448 l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~----------~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
+++++......++||||+.+ +|.+++....... ....++...+..++.||+.||.|||+.||+||||||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp 165 (304)
T cd05101 86 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA 165 (304)
T ss_pred eeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 99999999999999999985 7777776432211 123478888999999999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 590 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~ 590 (689)
+||+++. ++.+||+|||++....... ....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.
T Consensus 166 ~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 166 RNVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ceEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999984 7889999999987654321 11234567999999998889999999999999999998 88999877
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCC
Q 005590 591 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 670 (689)
Q Consensus 591 ~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP 670 (689)
+..+....+.... ....+ ...+..+++||.+||..+|
T Consensus 244 ~~~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~p 280 (304)
T cd05101 244 PVEELFKLLKEGH----------------------------------RMDKP---------ANCTNELYMMMRDCWHAIP 280 (304)
T ss_pred CHHHHHHHHHcCC----------------------------------cCCCC---------CCCCHHHHHHHHHHcccCh
Confidence 6655554432100 00001 1124568899999999999
Q ss_pred CCCcCHHHHHcC
Q 005590 671 QRRPTAREALDH 682 (689)
Q Consensus 671 ~kRpTa~ElL~h 682 (689)
++|||+.|+++.
T Consensus 281 ~~Rps~~e~l~~ 292 (304)
T cd05101 281 SHRPTFKQLVED 292 (304)
T ss_pred hhCCCHHHHHHH
Confidence 999999999864
No 326
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1e-32 Score=323.00 Aligned_cols=144 Identities=27% Similarity=0.430 Sum_probs=123.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|+++++||+|+||+||+|++..+++.||||+++... .....+.+|+.+++.+ .|+||++++.++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l------~hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS------KSPFIVHLYYSLQSAN 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc------CCCCcCeEEEEEEECC
Confidence 68999999999999999999999999999999997532 2234566677777665 4789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.|+||||+. ++|.+++.... .+++..++.|+.||+.||.|||..||+||||||+||||+. ++.+||+|||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG 149 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN--EGHIKLTDFG 149 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC--CCCEEEEeCC
Confidence 9999999996 47777765332 2788899999999999999999999999999999999984 7889999999
Q ss_pred Ccc
Q 005590 536 SSC 538 (689)
Q Consensus 536 ls~ 538 (689)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 764
No 327
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.6e-32 Score=284.48 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=192.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~---~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.++|+..+.||+|+||.||+|.+..++. .+|+|.+... ......+..|+++++.+ .|+||+++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF------SHHNIIRLEGVVTK 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCCCeeEEEEEEcc
Confidence 4678999999999999999999876654 6999998754 22344566777777666 47899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.+..++||||+.+ +|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~--~~~~kl~d 150 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS--NLECKVSD 150 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC--CCcEEECC
Confidence 9999999999986 5666654321 23888999999999999999999999999999999999984 77899999
Q ss_pred cCCcccccCCccc------cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 534 LGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 534 FGls~~~~~~~~~------~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
||++......... ...+..|+|||++.+..++.++|+|||||++|+|++ |..||......+....+....
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~--- 227 (268)
T cd05063 151 FGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF--- 227 (268)
T ss_pred CccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC---
Confidence 9998755332111 112456999999998889999999999999999997 999997766555444442110
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..|.. ...+..+.+|+.+||+.+|++||++.++++
T Consensus 228 ---------------------------------~~~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 228 ---------------------------------RLPAP-------MDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ---------------------------------CCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00100 012356789999999999999999999985
No 328
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-32 Score=283.92 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=192.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
++|++.+.||+|+||.||++. .+++.+|+|+++.+.. ...+.+|+.+++.++ |+||+++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~-~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVT-AQAFLEETAVMTKLH------HKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcch-HHHHHHHHHHHHhCC------CCCcCeEEEEEcCC-CcEE
Confidence 679999999999999999986 5788999999876532 356778888887664 67999999998754 5799
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+. ++|.+++..... ..+++..+..++.|++.||.|||+.|++||||||+||+++. ++.++|+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~--~~~~kl~Dfg~~~~ 149 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE--DGVAKVSDFGLARV 149 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCcEEECCCcccee
Confidence 999998 478777754321 23788899999999999999999999999999999999984 77899999999876
Q ss_pred ccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 540 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 540 ~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
..........+..|+|||.+.+..++.++|+|||||++|+|++ |..||......+....+....
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------------- 214 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------------
Confidence 5443333344678999999998889999999999999999998 999998766554433322100
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.+||++||+.+|.+||++.++++
T Consensus 215 -------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 -------------------RMEPP---------EGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -------------------CCCCC---------CcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00001 112456889999999999999999999985
No 329
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-32 Score=289.16 Aligned_cols=254 Identities=28% Similarity=0.396 Sum_probs=194.3
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~-----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
+|++.+.||+|++|.||++++. .+++.||||+++... .....+.+|+.++..+. +|++|+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-----CCcchhhhheeee
Confidence 4889999999999999999864 467889999987532 12345667888888775 3689999999999
Q ss_pred eCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.....++||||+.+ +|.+.+... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~ 147 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR------EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLT 147 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc------CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEE
Confidence 99999999999985 666665432 12788999999999999999999999999999999999985 6789999
Q ss_pred ecCCcccccCC----ccccccCccccChhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDN----LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~----~~~~~gt~~Y~APE~l~~~~--~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++...... .....++..|+|||.+.+.. .+.++|+||||+++|+|++|..||...........+.
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~------ 221 (288)
T cd05583 148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEIS------ 221 (288)
T ss_pred ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHH------
Confidence 99988654322 12245788999999987655 7889999999999999999999996432111111110
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHHHHcCC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHP 683 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~hp 683 (689)
+... ......| ...+..+.+||.+||+.||++||| +.++|+||
T Consensus 222 ------------~~~~-------------~~~~~~~---------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 222 ------------RRIL-------------KSKPPFP---------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ------------HHHH-------------ccCCCCC---------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0000 0000111 113456889999999999999998 57789999
Q ss_pred CCCCC
Q 005590 684 WLQHP 688 (689)
Q Consensus 684 wf~~~ 688 (689)
||+..
T Consensus 268 ~~~~~ 272 (288)
T cd05583 268 FFQGI 272 (288)
T ss_pred ccccC
Confidence 99863
No 330
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.4e-32 Score=283.60 Aligned_cols=236 Identities=22% Similarity=0.273 Sum_probs=185.2
Q ss_pred EeccCCCCceEEEEE--CCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEE
Q 005590 388 YLGSAAFSKVFQAQD--LHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 462 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d--~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVm 462 (689)
.||+|+||.||+|.+ ..++..+|+|+++... .....+.+|+.+++.+ +|+||+++++++. .+..++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~-~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL------DNPYIVRMIGICE-AESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC------CCCCcceEEEEEc-CCCcEEEE
Confidence 589999999999964 4678899999987542 2345667777777766 4789999999875 45678999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc
Q 005590 463 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 463 Ey~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
||+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+||||||.||+++. ++.++|+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 75 ELAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALG 146 (257)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccC
Confidence 99985 5777664322 2889999999999999999999999999999999999985 7789999999987654
Q ss_pred CCcc------ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 542 DNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 542 ~~~~------~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
.... ...++..|+|||.+....++.++|+|||||++|+|++ |..||......+....+...
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~------------ 214 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG------------ 214 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC------------
Confidence 3221 1233578999999988889999999999999999998 99999877665554443210
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+|. ..++.+.+||++||+.||++||+++++.+
T Consensus 215 ----------------------~~~~~~~---------~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 215 ----------------------ERMECPQ---------RCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred ----------------------CCCCCCC---------CCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0011111 13456889999999999999999999875
No 331
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-33 Score=319.07 Aligned_cols=250 Identities=24% Similarity=0.315 Sum_probs=206.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
..+.+..+.||+|+||+||+|+-.. ....||||.++... ....++.+|++++..++ |||||++++++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~------H~nIVrLlGVC 558 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ------HPNIVRLLGVC 558 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc------CCCeEEEEEEE
Confidence 3556777889999999999997432 34579999998653 34678899999999885 68999999999
Q ss_pred EeCCeEEEEEEccc-cchHHHHhhhhccCC--------CcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 005590 453 YHLEHLFIVCELLR-ANLYEFQKFNQESGG--------EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 523 (689)
Q Consensus 453 ~~~~~l~lVmEy~~-g~L~~l~~~~~~~~~--------~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~ 523 (689)
..++.+++|+|||. |+|.++++....... ..+++..+...|+.||+.|+.||-++.+|||||-.+|+||.
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg- 637 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG- 637 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec-
Confidence 99999999999998 789999875543211 22388899999999999999999999999999999999999
Q ss_pred cCCCeEEEEecCCcccccCCcccc-----ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 005590 524 YQRCEIKIIDLGSSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 597 (689)
Q Consensus 524 ~~~~~vkL~DFGls~~~~~~~~~~-----~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~ 597 (689)
++..|||+|||+++..-...... .-..+|||||.|.+.+++.++||||+||+|||+++ |..||.+.+..+++.
T Consensus 638 -e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 638 -ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred -cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 48899999999998654333322 33678999999999999999999999999999999 999999999999888
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
.|... ++ ...|+ ..+.++.+||..||+.+|++||+..
T Consensus 717 ~i~~g---------------------------------~l-L~~Pe---------~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 717 CIRAG---------------------------------QL-LSCPE---------NCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred HHHcC---------------------------------Cc-ccCCC---------CCCHHHHHHHHHHhhcCcccCCCHH
Confidence 77411 11 12222 2346688999999999999999999
Q ss_pred HHH
Q 005590 678 EAL 680 (689)
Q Consensus 678 ElL 680 (689)
|+-
T Consensus 754 eI~ 756 (774)
T KOG1026|consen 754 EIH 756 (774)
T ss_pred HHH
Confidence 863
No 332
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-32 Score=288.64 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=195.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .....+.+|+.+++.+. |+||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~------h~~iv~~~~~~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------HPNIVKLLGVC 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC------CCchheEEEEE
Confidence 3679999999999999999998743 67889999987542 23456777888888774 78999999999
Q ss_pred EeCCeEEEEEEcccc-chHHHHhhhhc----------------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 005590 453 YHLEHLFIVCELLRA-NLYEFQKFNQE----------------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 515 (689)
Q Consensus 453 ~~~~~l~lVmEy~~g-~L~~l~~~~~~----------------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLK 515 (689)
......++||||+.+ +|.+++..... ......+++..+..++.||+.||.|||+.+++|||||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 78 AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 999999999999985 78777753321 0111237888899999999999999999999999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 589 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~ 589 (689)
|+||+++. ++.++|+|||++...... ......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+
T Consensus 158 p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGE--NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecC--CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999984 788999999998654322 112234567999999998899999999999999999998 8889976
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccC
Q 005590 590 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 669 (689)
Q Consensus 590 ~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~d 669 (689)
....+....+.... ....|. ..+..+.+||.+||+.+
T Consensus 236 ~~~~~~~~~~~~~~----------------------------------~~~~~~---------~~~~~l~~li~~~l~~~ 272 (288)
T cd05050 236 MAHEEVIYYVRDGN----------------------------------VLSCPD---------NCPLELYNLMRLCWSKL 272 (288)
T ss_pred CCHHHHHHHHhcCC----------------------------------CCCCCC---------CCCHHHHHHHHHHcccC
Confidence 65555443332000 000011 12356889999999999
Q ss_pred CCCCcCHHHHHc
Q 005590 670 PQRRPTAREALD 681 (689)
Q Consensus 670 P~kRpTa~ElL~ 681 (689)
|++|||+.|+++
T Consensus 273 p~~Rpt~~el~~ 284 (288)
T cd05050 273 PSDRPSFASINR 284 (288)
T ss_pred cccCCCHHHHHH
Confidence 999999999875
No 333
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-32 Score=284.45 Aligned_cols=246 Identities=22% Similarity=0.287 Sum_probs=193.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~---~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..+|++.+.||+|+||.||+|++..++. .+|+|.++... .....+.+|+.+++.+ +||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~ 76 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF------DHPNIIHLEGVVTK 76 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEec
Confidence 3689999999999999999998865443 79999886532 2335667777777766 47899999999999
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.+..++||||+.+ +|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+|||++. ++.++|+|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~~l~d 149 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS--NLVCKVSD 149 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC--CCeEEeCC
Confidence 9999999999985 6776665322 23788999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCCcc------ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 534 LGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 534 FGls~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
||++........ ....+..|+|||.+.+..++.++|+|||||++|++++ |..||......+....+.....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-- 227 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-- 227 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc--
Confidence 999876543221 1122457999999998889999999999999999887 9999987665554444321100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.|.. ...++.+.+++.+||+.+|.+||++.++++
T Consensus 228 ----------------------------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 ----------------------------------LPAP-------MDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ----------------------------------CCCC-------CCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0110 112356889999999999999999999985
No 334
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.2e-33 Score=286.72 Aligned_cols=243 Identities=28% Similarity=0.422 Sum_probs=189.1
Q ss_pred EEEEEeccCCCCceEEEEEC----CCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 384 YVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 384 ~i~~~LG~G~fG~Vyla~d~----~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.+.+.||.|.||.||+|... ..+..|+||+++.. ......+.+|+++++.++ ||||+++++++...+.
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~g~~~~~~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR------HPNIVKLYGFCIENEP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS------BTTBE-EEEEEESSSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc------cccccccccccccccc
Confidence 46789999999999999976 45678999999653 233577888888888774 6799999999998888
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||+. |+|.+++.... ...++...+..|+.||+.||.|||+.+++|++|+++||+++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~ 149 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS--NGQVKLSDFGL 149 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET--TTEEEEESTTT
T ss_pred ccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence 999999998 67888877651 122889999999999999999999999999999999999995 78999999999
Q ss_pred cccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 537 SCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 537 s~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
+....... ........|+|||.+.+..++.++||||||+++|||++ |+.||...+..+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~------- 222 (259)
T PF07714_consen 150 SRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ------- 222 (259)
T ss_dssp GEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 87663211 12345678999999998889999999999999999999 789998877766665543110
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.++|..||..||++|||+.++++
T Consensus 223 ---------------------------~~~~~---------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 223 ---------------------------RLPIP---------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ---------------------------ETTSB---------TTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ---------------------------cceec---------cchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00111 112456889999999999999999999985
No 335
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-35 Score=290.49 Aligned_cols=272 Identities=30% Similarity=0.490 Sum_probs=213.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC-----CeE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-----EHL 458 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~-----~~l 458 (689)
+-||.|+||.||.+.|..+|+.||+|.+.+- -.......+|+++|...+ |.|++..++..+-. +.+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk------HdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR------HDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc------cccHHHHHHhcCCCCchHHHHH
Confidence 4589999999999999999999999988642 233467778888888776 45788777776533 357
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 538 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 538 (689)
|+|+|.|..+|...+-..+ .++...++.+++||++||+|||+.+|.||||||.|+|+++ ++.+||+|||+++
T Consensus 133 YV~TELmQSDLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLAR 204 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHhhhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc--CceEEeccccccc
Confidence 8889998877776655333 3888899999999999999999999999999999999996 9999999999998
Q ss_pred cccCCc----cccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 539 FQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 539 ~~~~~~----~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
...... +..+-|..|+|||++.|. .|+.++||||+|||+.||+..+..|+..++.+.+..|...+|.+..+....
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 755432 224568899999999986 499999999999999999999999999999999999999999998887654
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccC-----CcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF-----SDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~-----~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.-+=.+.. + ++ ..+..+++...+.. ...+..+++.+||..||++|++..+++.|+++.+
T Consensus 285 ACEGAk~H-----~---------LR-~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 285 ACEGAKNH-----V---------LR-AGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HhhhhHHH-----h---------hc-cCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 32211100 0 00 01111122211111 2246789999999999999999999999999864
No 336
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-32 Score=290.78 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=194.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCC--------------cEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTG--------------VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEH 443 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg--------------~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~ 443 (689)
..+|++.+.||+|+||.||++++..++ ..||+|++... ......+.+|+++++.++ |+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~------h~ 77 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK------NP 77 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CC
Confidence 368999999999999999999875432 35899998764 223456778888888774 67
Q ss_pred ceeEEEEEEEeCCeEEEEEEcccc-chHHHHhhhhcc------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 444 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 444 ~Iv~l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
||+++++++......++||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+.|++|+||||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 999999999999999999999985 677766432110 0112367888999999999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPN 589 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt--G~~PF~~ 589 (689)
+||+++. ++.+||+|||++....... ....++..|+|||++.+..++.++|+|||||++|+|++ +..||..
T Consensus 158 ~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 158 RNCLVGN--HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhEEEcC--CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999984 7789999999986543221 11234668999999998889999999999999999998 6788877
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccC
Q 005590 590 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 669 (689)
Q Consensus 590 ~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~d 669 (689)
.+..+.+..+....... ........+ ...+..+.+||.+||+.|
T Consensus 236 ~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~---------~~~~~~l~~li~~~l~~~ 279 (295)
T cd05097 236 LSDEQVIENTGEFFRNQ---------------------------GRQIYLSQT---------PLCPSPVFKLMMRCWSRD 279 (295)
T ss_pred cChHHHHHHHHHhhhhc---------------------------cccccCCCC---------CCCCHHHHHHHHHHcCCC
Confidence 66555544432111000 000000000 112456899999999999
Q ss_pred CCCCcCHHHHHc
Q 005590 670 PQRRPTAREALD 681 (689)
Q Consensus 670 P~kRpTa~ElL~ 681 (689)
|++|||++++++
T Consensus 280 p~~RPs~~~i~~ 291 (295)
T cd05097 280 IKDRPTFNKIHH 291 (295)
T ss_pred chhCcCHHHHHH
Confidence 999999999975
No 337
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=7.5e-33 Score=299.20 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=193.0
Q ss_pred ecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
-.++|++.+.||+|+||.||+|++ ..+++.||||+++.+. .....+.+|+.++..+. .|+||++++++
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~ 79 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGA 79 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-----CCccHhhhcce
Confidence 357899999999999999999984 3567899999997532 23456778999888885 36899999998
Q ss_pred EEeC-CeEEEEEEcccc-chHHHHhhhhcc--------------------------------------------------
Q 005590 452 FYHL-EHLFIVCELLRA-NLYEFQKFNQES-------------------------------------------------- 479 (689)
Q Consensus 452 f~~~-~~l~lVmEy~~g-~L~~l~~~~~~~-------------------------------------------------- 479 (689)
+... ...++||||+.+ +|.+++......
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 7654 568999999984 777776532110
Q ss_pred -----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc----
Q 005590 480 -----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL---- 544 (689)
Q Consensus 480 -----------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~---- 544 (689)
.....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcchhh
Confidence 00123678888999999999999999999999999999999984 7789999999987643221
Q ss_pred -cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhh
Q 005590 545 -CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 622 (689)
Q Consensus 545 -~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~ 622 (689)
....++..|+|||.+.+..++.++|+|||||++|+|++ |..||........+.....
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~--------------------- 296 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK--------------------- 296 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh---------------------
Confidence 11234567999999999899999999999999999997 9999976432221111100
Q ss_pred ccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 623 KEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.......|. ..++.+.+++..||+.||++|||+.|+++|
T Consensus 297 ------------~~~~~~~~~---------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 297 ------------EGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ------------ccCCCCCCC---------CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000011111 134568899999999999999999999986
No 338
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.7e-32 Score=284.76 Aligned_cols=246 Identities=21% Similarity=0.302 Sum_probs=193.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~---~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
++|++.+.||+|+||.||+|.+..+++ .||||++... ......+..|+.+++.+. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~ 77 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS 77 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CcCcceEEEEECCC
Confidence 569999999999999999999877665 5999998753 333456777888887664 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
...++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~--~~~~kl~df 150 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC--CCcEEECCC
Confidence 999999999986 5666654322 23888999999999999999999999999999999999984 778999999
Q ss_pred CCcccccCCcc--c---cc---cCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCC
Q 005590 535 GSSCFQTDNLC--L---YV---QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 535 Gls~~~~~~~~--~---~~---gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
|++........ . .. .+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-- 228 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-- 228 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--
Confidence 98865433211 1 11 1347999999998899999999999999999986 999998766555444432110
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..|.. ...+..+.+++.+||+.+|++||++.+++..
T Consensus 229 ----------------------------------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 229 ----------------------------------RLPPP-------MDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred ----------------------------------cCCCc-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00100 0123557899999999999999999999863
No 339
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.8e-32 Score=289.19 Aligned_cols=258 Identities=21% Similarity=0.311 Sum_probs=194.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPAD 441 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~----------------tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~ 441 (689)
.++|++.+.||+|+||.||++.+.. ++..+|+|++... ......+.+|+.+++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~------ 77 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK------ 77 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------
Confidence 4689999999999999999986432 3456899998754 233456778888888775
Q ss_pred CCceeEEEEEEEeCCeEEEEEEccc-cchHHHHhhhhccC-----CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 005590 442 EHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESG-----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 515 (689)
Q Consensus 442 h~~Iv~l~~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~~-----~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLK 515 (689)
|+||+++++++......++||||+. ++|.+++....... ....+++..+..++.||+.||.|||+.||+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 6799999999999999999999997 47777765432211 11347788999999999999999999999999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 588 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt--G~~PF~ 588 (689)
|+|||++. ++.++|+|||++....... .....+..|+|||+..+..++.++|+|||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 158 TRNCLVGK--NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred hheEEEcC--CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999984 7889999999987543221 11233568999999988889999999999999999998 788997
Q ss_pred CChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhccc
Q 005590 589 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 668 (689)
Q Consensus 589 ~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~ 668 (689)
..+..+....... ++... .....+|.. ...+..+.+||..||+.
T Consensus 236 ~~~~~~~~~~~~~------------------~~~~~-----------~~~~~~~~~-------~~~~~~~~~li~~cl~~ 279 (296)
T cd05095 236 QLSDEQVIENTGE------------------FFRDQ-----------GRQVYLPKP-------ALCPDSLYKLMLSCWRR 279 (296)
T ss_pred ccChHHHHHHHHH------------------HHhhc-----------cccccCCCC-------CCCCHHHHHHHHHHcCC
Confidence 6655444332210 00000 000001111 11235688999999999
Q ss_pred CCCCCcCHHHHHc
Q 005590 669 NPQRRPTAREALD 681 (689)
Q Consensus 669 dP~kRpTa~ElL~ 681 (689)
||++|||+.++++
T Consensus 280 ~p~~Rp~~~~i~~ 292 (296)
T cd05095 280 NAKERPSFQEIHA 292 (296)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999875
No 340
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2e-32 Score=284.70 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=189.4
Q ss_pred EeccCCCCceEEEEECCCCc--EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg~--~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||.||+|++..++. .+++|.++.. ......+.+|+.++..+. .||||+++++++......++|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-----cCCCeeeEEEEEecCCCceEEEE
Confidence 58999999999999887776 4688887642 334456778888888875 37899999999999999999999
Q ss_pred ccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 464 LLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 464 y~~-g~L~~l~~~~~~~----------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
|+. ++|.+++...... .....+++..+..++.|++.||+|||+.|++||||||+||+++. ++.+||+
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~ 154 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIA 154 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEEC
Confidence 997 5788877643311 11224788999999999999999999999999999999999984 7889999
Q ss_pred ecCCcccccCCcc--ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 533 DLGSSCFQTDNLC--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 533 DFGls~~~~~~~~--~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
|||++........ ....+..|+|||++....++.++|+|||||++|+|++ |..||.+.+..+....+...
T Consensus 155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~------- 227 (270)
T cd05047 155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG------- 227 (270)
T ss_pred CCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-------
Confidence 9999853322111 1223567999999988889999999999999999997 99999766544443332100
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.....+ ...+..+.+|+.+||..||.+|||+.++++.
T Consensus 228 ---------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 228 ---------------------------YRLEKP---------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred ---------------------------CCCCCC---------CcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 000011 0123568899999999999999999999863
No 341
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.4e-32 Score=280.05 Aligned_cols=243 Identities=26% Similarity=0.381 Sum_probs=195.2
Q ss_pred EEEEEeccCCCCceEEEEECCCC----cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 384 YVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 384 ~i~~~LG~G~fG~Vyla~d~~tg----~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++.+.||.|+||.||++++...+ ..+|+|++..... ....+..|+.+++.++ |+||+++++++...+.
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~ 75 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD------HPNIVKLLGVCTEEEP 75 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC------CCchheEEEEEcCCCe
Confidence 56788999999999999987766 8999999976543 4567778888888773 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.+++|||+.+ +|.+++...... .+++..+..++.||+.||.+||+.|++|+||||+||+++. ++.++|+|||+
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg~ 149 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFGL 149 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccCC
Confidence 9999999985 677776543221 1789999999999999999999999999999999999985 77899999999
Q ss_pred cccccCCccc----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~~----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
+......... ..+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||...+.......+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 221 (258)
T smart00219 150 SRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-------- 221 (258)
T ss_pred ceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--------
Confidence 8765433111 225678999999988889999999999999999998 899998766555554432110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+. ..+..+.++|.+||..||++|||+.|+++
T Consensus 222 --------------------------~~~~~~---------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 --------------------------RLPKPE---------NCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred --------------------------CCCCCC---------cCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 000111 13456889999999999999999999986
No 342
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.5e-32 Score=287.45 Aligned_cols=259 Identities=22% Similarity=0.231 Sum_probs=188.7
Q ss_pred cCcE-EEEEEeccCCCCceEEEE----ECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRY-YVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY-~i~~~LG~G~fG~Vyla~----d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.+|| ++++.||+|+||+||++. ...+++.||+|+++.... ....+.+|+++++.+. |+||+++++++
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~ 75 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY------HENIVKYKGCC 75 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence 3566 999999999999998864 345688999999976432 3456678888888774 68999999987
Q ss_pred EeC--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 453 YHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 453 ~~~--~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
... ...++||||+.+ +|.+++... .+++..++.++.|++.||.|||+.||+||||||+|||++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~ 146 (283)
T cd05080 76 SEQGGKGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN--DRLV 146 (283)
T ss_pred ecCCCceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC--CCcE
Confidence 753 468999999985 566665422 2889999999999999999999999999999999999985 6789
Q ss_pred EEEecCCcccccCCcc------ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 005590 530 KIIDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 530 kL~DFGls~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~ 603 (689)
+|+|||++........ ...++..|+|||.+.+..++.++|||||||++|+|++|..||....... ...+....
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~ 225 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQ 225 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccc
Confidence 9999999876543211 1234567999999998889999999999999999999999986543211 00000000
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
+...... ..+.. ........| ...+..+.+|+.+||+.+|++|||++++++
T Consensus 226 ~~~~~~~------~~~~~------------~~~~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 226 GQMTVVR------LIELL------------ERGMRLPCP---------KNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred cccchhh------hhhhh------------hcCCCCCCC---------CCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000000 00000 000000011 123467899999999999999999999985
No 343
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.2e-32 Score=281.95 Aligned_cols=237 Identities=24% Similarity=0.304 Sum_probs=185.5
Q ss_pred EEeccCCCCceEEEEECCCC---cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLHTG---VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg---~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
++||+|+||.||+|++..++ ..+|+|.+..... ....+.+|+.+++.+ +|+||+++++++. ....++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL------DHPCIVRLIGVCK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc------CCCCeeeEEEEEc-CCceEEE
Confidence 36899999999999875554 7899999886543 445677788887766 4789999999875 4568999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+. ++|.+++.... .+++..+..++.|++.||.|||..+++|+||||+|||++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~--~~~~kl~df~~~~~~ 145 (257)
T cd05060 74 MELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN--RHQAKISDFGMSRAL 145 (257)
T ss_pred EEeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC--CCcEEecccccccee
Confidence 99997 47877775433 3889999999999999999999999999999999999984 788999999998765
Q ss_pred cCCcccc------ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 541 TDNLCLY------VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 541 ~~~~~~~------~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
....... .++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~---------- 215 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---------- 215 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC----------
Confidence 4322211 12357999999998899999999999999999998 999997765544433332100
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....| ...+..++++|.+||..+|++|||+.++++
T Consensus 216 ------------------------~~~~~---------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 216 ------------------------RLPRP---------EECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ------------------------cCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00011 112356889999999999999999999975
No 344
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.1e-33 Score=283.69 Aligned_cols=228 Identities=25% Similarity=0.287 Sum_probs=181.1
Q ss_pred CCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcccc-chH
Q 005590 392 AAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLY 470 (689)
Q Consensus 392 G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g-~L~ 470 (689)
|.+|+||++++..+++.||+|.++.... ..+|...+.. ..||||+++++++...+..++||||+.+ +|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIP------HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHh------cCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 8899999999999999999999976532 1223222221 2478999999999999999999999985 677
Q ss_pred HHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCccccccC
Q 005590 471 EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS 550 (689)
Q Consensus 471 ~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt 550 (689)
+++.... .+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||.+...........++
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~ 145 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSCDGEAVE 145 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhccccccccCCcC
Confidence 7765332 2889999999999999999999999999999999999985 7789999999876665554445667
Q ss_pred ccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhh
Q 005590 551 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYI 630 (689)
Q Consensus 551 ~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~ 630 (689)
..|+|||.+.+..++.++|+||+||++|+|++|..||...... +.
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~------------------------------ 190 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----IN------------------------------ 190 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc------------------------------
Confidence 7899999998888999999999999999999999887432100 00
Q ss_pred hhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCC
Q 005590 631 NEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWL 685 (689)
Q Consensus 631 ~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf 685 (689)
......+|. ..+..+.+||.+||+.||++|||+ +++++||||
T Consensus 191 ----~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 191 ----THTTLNIPE---------WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ----cccccCCcc---------cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 000011221 134568899999999999999996 999999997
No 345
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.6e-32 Score=285.73 Aligned_cols=244 Identities=20% Similarity=0.241 Sum_probs=185.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
++|++.+.||+|+||+||+|.+..+++ .+++|.+.... .....+..|+.++. ...|+||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~------~l~h~~iv~~~~~~~- 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMG------SLDHAYIVRLLGICP- 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHh------cCCCCCcceEEEEEC-
Confidence 578999999999999999999877776 46777765322 12233444444443 346889999999875
Q ss_pred CCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
....++|+||+. ++|.+++..... .+++..+..++.||+.||.|||+.|++||||||+|||++. ++.+||+|
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~D 152 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIAD 152 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEcC
Confidence 456788999987 678877754322 3889999999999999999999999999999999999984 78899999
Q ss_pred cCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 534 LGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 534 FGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
||+++...... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.........+...
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~----- 227 (279)
T cd05111 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG----- 227 (279)
T ss_pred CccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----
Confidence 99987643221 12345678999999998899999999999999999998 99999876544332222100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.....+. .....+.+++.+||..||.+|||+.|+++
T Consensus 228 -----------------------------~~~~~~~---------~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 228 -----------------------------ERLAQPQ---------ICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -----------------------------CcCCCCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0000010 12345778999999999999999999886
No 346
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.3e-32 Score=286.01 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=194.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d-----~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+|++.++||+|+||.||+++. ..++..+|+|.+... ......+.+|+++++.+. |+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 77 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ------HQHIVRFYGVCT 77 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC------CCCCceEEEEEe
Confidence 45788999999999999999974 235678999987643 233456777888887664 679999999999
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhc---------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQE---------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 523 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~---------~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~ 523 (689)
.....++||||+. ++|.+++..... ......+++..+..++.||+.||.|||+.|++||||||+|||++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence 9999999999998 477777654321 011124788999999999999999999999999999999999984
Q ss_pred cCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 005590 524 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 597 (689)
Q Consensus 524 ~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~ 597 (689)
++.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||......+...
T Consensus 158 --~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 158 --GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred --CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 7889999999986543221 12334678999999999999999999999999999998 999997665554443
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
.+.... ....+ ...++.+.+||.+||+.||.+||++.
T Consensus 236 ~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~P~~Rp~~~ 272 (280)
T cd05092 236 CITQGR----------------------------------ELERP---------RTCPPEVYAIMQGCWQREPQQRMVIK 272 (280)
T ss_pred HHHcCc----------------------------------cCCCC---------CCCCHHHHHHHHHHccCChhhCCCHH
Confidence 332100 00011 11235678999999999999999999
Q ss_pred HHHc
Q 005590 678 EALD 681 (689)
Q Consensus 678 ElL~ 681 (689)
++++
T Consensus 273 ~l~~ 276 (280)
T cd05092 273 DIHS 276 (280)
T ss_pred HHHH
Confidence 9985
No 347
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.6e-32 Score=277.97 Aligned_cols=238 Identities=24% Similarity=0.366 Sum_probs=187.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
++||+|+||.||++.+.. ++.||+|++..... ....+.+|+++++.+ +|+||+++++++......++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~~~~~~~~~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY------DHPNIVKLIGVCVQKQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCeEEEEEEEecCCCeEEEEEc
Confidence 368999999999999877 99999999875432 345667788877766 478999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|.+++.... ..++...+..++.|++.||.|||+++++||||||+||+++. ++.++|+|||++......
T Consensus 74 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 74 VPGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC--CCcEEEeeccccccccCC
Confidence 975 6766664322 13788899999999999999999999999999999999984 788999999998755422
Q ss_pred cc-----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 005590 544 LC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 617 (689)
Q Consensus 544 ~~-----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~ 617 (689)
.. ....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+....
T Consensus 147 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-------------- 212 (251)
T cd05041 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-------------- 212 (251)
T ss_pred cceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--------------
Confidence 11 1223556999999998889999999999999999999 899997765444333321100
Q ss_pred hhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 618 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....| ...+..+.+||.+||..+|++|||+.|+++
T Consensus 213 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 213 --------------------RMPAP---------QLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --------------------CCCCC---------ccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00011 112456889999999999999999999986
No 348
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.5e-32 Score=300.29 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=196.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~-----~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
+-.++|.+.++||+|+||.||+|++. .+++.||+|+++... .....+.+|++++..+. .|+||+++++
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----~H~niv~~~~ 108 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-----PHLNIVNLLG 108 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-----CCCCeEEEEE
Confidence 33467899999999999999999853 345689999997542 22346778888888774 2789999999
Q ss_pred EEEeCCeEEEEEEccc-cchHHHHhhhhcc--------------------------------------------------
Q 005590 451 YFYHLEHLFIVCELLR-ANLYEFQKFNQES-------------------------------------------------- 479 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~-------------------------------------------------- 479 (689)
++....+.++||||+. |+|.+++......
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999998 5788877543210
Q ss_pred ------------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 005590 480 ------------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 517 (689)
Q Consensus 480 ------------------------------------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~ 517 (689)
.....+++..++.++.||+.||.|||+.+|+||||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~ 268 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR 268 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence 01123677788999999999999999999999999999
Q ss_pred cEEEeccCCCeEEEEecCCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCh
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDA 591 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~ 591 (689)
|||++. .+.+||+|||++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++ |..||....
T Consensus 269 NiLl~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 269 NVLICE--GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred eEEEeC--CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999984 778999999998754321 122356788999999998889999999999999999998 899997654
Q ss_pred HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCC
Q 005590 592 VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQ 671 (689)
Q Consensus 592 ~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~ 671 (689)
..+.+...+.. ......|. ..+..+.+||.+||..+|.
T Consensus 347 ~~~~~~~~~~~---------------------------------~~~~~~p~---------~~~~~l~~li~~cl~~~P~ 384 (401)
T cd05107 347 MNEQFYNAIKR---------------------------------GYRMAKPA---------HASDEIYEIMQKCWEEKFE 384 (401)
T ss_pred chHHHHHHHHc---------------------------------CCCCCCCC---------CCCHHHHHHHHHHcCCChh
Confidence 33332222100 00001111 1245688999999999999
Q ss_pred CCcCHHHHHcC
Q 005590 672 RRPTAREALDH 682 (689)
Q Consensus 672 kRpTa~ElL~h 682 (689)
+||+++++++.
T Consensus 385 ~RPs~~ell~~ 395 (401)
T cd05107 385 IRPDFSQLVHL 395 (401)
T ss_pred HCcCHHHHHHH
Confidence 99999999864
No 349
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-32 Score=279.02 Aligned_cols=240 Identities=25% Similarity=0.317 Sum_probs=189.2
Q ss_pred EEeccCCCCceEEEEECC-CCc--EEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLH-TGV--DVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~-tg~--~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
+.||+|++|.||+|.+.. .++ .+|||.+..+.. ....+.+|+.+++.++ |+||+++++.+.. ...++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD------HENLIRLYGVVLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC------CCCccceeEEEcC-CeEEEE
Confidence 368999999999999755 333 689999986543 3456677888777664 6899999999988 899999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
|||+. ++|.+.+..... ..+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~ 147 (257)
T cd05040 74 TELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRAL 147 (257)
T ss_pred EEecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec--CCEEEeccccccccc
Confidence 99997 577777654321 23889999999999999999999999999999999999995 688999999998765
Q ss_pred cCCc------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 541 TDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 541 ~~~~------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
.... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------- 218 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE--------- 218 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---------
Confidence 4321 12345678999999999899999999999999999998 9999977666555444421000
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....+ ...+..+.++|.+||+.+|++|||+.++++
T Consensus 219 ------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 ------------------------RLERP---------EACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ------------------------cCCCC---------ccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 00001 112356889999999999999999999985
No 350
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.9e-32 Score=280.77 Aligned_cols=247 Identities=22% Similarity=0.310 Sum_probs=192.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~t---g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
-..+|.+.+.||+|+||.||+|.+... ...+|+|...... .....+.+|+.+++.+ +|+||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~ 77 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF------DHPHIVKLIGVIT 77 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCchhceeEEEc
Confidence 346799999999999999999987543 3568999887543 3445677788887777 4689999999886
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
. ...++||||+. ++|.+++..... .+++..+..++.||+.||.|||+.|++|+||||+||+++. .+.++|+
T Consensus 78 ~-~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~ 149 (270)
T cd05056 78 E-NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--PDCVKLG 149 (270)
T ss_pred C-CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec--CCCeEEc
Confidence 5 55789999998 478777754321 2789999999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCCcc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 533 DLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 533 DFGls~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|||++........ ...++..|+|||.+....++.++|+|||||++|+|++ |..||......+....+....
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---- 225 (270)
T cd05056 150 DFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE---- 225 (270)
T ss_pred cCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----
Confidence 9999876443211 1223467999999988889999999999999999996 999998776555444332100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....| ...+..+.+||.+||..+|++|||+.+++..
T Consensus 226 ------------------------------~~~~~---------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 226 ------------------------------RLPMP---------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ------------------------------cCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00011 1124568899999999999999999998863
No 351
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.5e-32 Score=312.96 Aligned_cols=274 Identities=20% Similarity=0.223 Sum_probs=176.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC----CcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE----
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHT----GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY---- 451 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~t----g~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~---- 451 (689)
.++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .|..+...+.+.. +.++..++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~ 201 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP 201 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence 36899999999999999999999888 99999998764321 1222222222111 1111111111
Q ss_pred --EEeCCeEEEEEEcccc-chHHHHhhhhcc--------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 005590 452 --FYHLEHLFIVCELLRA-NLYEFQKFNQES--------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL 514 (689)
Q Consensus 452 --f~~~~~l~lVmEy~~g-~L~~l~~~~~~~--------------~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDL 514 (689)
.......++||||+.+ +|.+++...... ..........+..++.||+.||.|||+.+|+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2345679999999985 577766532110 00011223456789999999999999999999999
Q ss_pred CCCcEEEeccCCCeEEEEecCCcccccC----CccccccCccccChhhhcCC----------------------CCCchh
Q 005590 515 KPENILIKSYQRCEIKIIDLGSSCFQTD----NLCLYVQSRSYRAPEVIIGL----------------------PYDQKI 568 (689)
Q Consensus 515 Kp~NILl~~~~~~~vkL~DFGls~~~~~----~~~~~~gt~~Y~APE~l~~~----------------------~~s~~~ 568 (689)
||+|||++. .++.+||+|||++..... ......+++.|+|||.+... .+..++
T Consensus 282 KP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999984 357899999999975432 22346789999999976432 233456
Q ss_pred hHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhh
Q 005590 569 DLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLE 648 (689)
Q Consensus 569 DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~ 648 (689)
|||||||+||+|+++..|+. .....+.+++...+... ..|.. . .... ..+......
T Consensus 361 DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~-~~~~~---~---~~~~---------------~~~~~~~~~ 416 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDL-VAWRK---L---VEPR---------------ASPDLRRGF 416 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcH-HHHHH---h---hccc---------------cchhhhhhh
Confidence 99999999999999776643 22333333332222111 11110 0 0000 000000000
Q ss_pred hhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 649 HHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 649 ~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
...........+||.+||+.||++|||+.|+|+||||++
T Consensus 417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence 111122345679999999999999999999999999986
No 352
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.3e-32 Score=280.14 Aligned_cols=250 Identities=27% Similarity=0.421 Sum_probs=193.3
Q ss_pred cEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecch-----------hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK-----------DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 449 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~-tg~~vAvKii~~~~-----------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~ 449 (689)
.|++.+.||+|+||.||++++.. +++.+|+|.+.... ........|+.++... .+|+||++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~h~~i~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-----LRHPNIVRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-----CCCCCeeeEE
Confidence 47889999999999999999877 78899999876321 1123344455544432 3588999999
Q ss_pred EEEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCC
Q 005590 450 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRC 527 (689)
Q Consensus 450 ~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~ 527 (689)
+++...++.++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~--~~ 151 (269)
T cd08528 76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE--DD 151 (269)
T ss_pred eeEccCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC--CC
Confidence 999999999999999985 676666432211 2238899999999999999999996 78999999999999985 77
Q ss_pred eEEEEecCCcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 528 EIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 528 ~vkL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
.++|+|||.+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+......
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 8999999998765443 23356788999999999888999999999999999999999999776555444433211000
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..+. ...++.+.+||.+||+.||++||++.|+..+
T Consensus 232 ----------------------------------~~~~--------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 232 ----------------------------------PLPE--------GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ----------------------------------cCCc--------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0000 1123568899999999999999999999764
No 353
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=334.05 Aligned_cols=251 Identities=31% Similarity=0.433 Sum_probs=203.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.-||+-..+||.|.||.||.|.+..+|+..|+|-++.. ....+.+.+|..++..++ |||++++|++-.+.+
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln------HpNlV~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN------HPNLVRYYGVEVHRE 1307 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc------CccccccCceeecHH
Confidence 45788889999999999999999999999999977643 344567788888888886 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..+|.||||.+ +|.++...... ..+...+.+..|++.||.|||+.|||||||||.||+++. +|.||++|||
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~--~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF--NGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec--CCcEEeeccc
Confidence 99999999995 67666654432 567778899999999999999999999999999999995 7899999999
Q ss_pred CcccccCC-------ccccccCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 536 SSCFQTDN-------LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 536 ls~~~~~~-------~~~~~gt~~Y~APE~l~~~---~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
.|...... ....+||+.|||||++.+. +...+.|||||||++.||+||+.||...+.+-.+...++
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~---- 1455 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA---- 1455 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh----
Confidence 99765443 2346899999999999764 466799999999999999999999976443322221111
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
.+-..++|+. .+++.++||.+||+.||++|+++.|+|+|-|-
T Consensus 1456 -----------------------------~gh~Pq~P~~---------ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1456 -----------------------------AGHKPQIPER---------LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred -----------------------------ccCCCCCchh---------hhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 1112233332 34567899999999999999999999999875
Q ss_pred C
Q 005590 686 Q 686 (689)
Q Consensus 686 ~ 686 (689)
.
T Consensus 1498 ~ 1498 (1509)
T KOG4645|consen 1498 K 1498 (1509)
T ss_pred c
Confidence 4
No 354
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.1e-32 Score=282.18 Aligned_cols=245 Identities=21% Similarity=0.317 Sum_probs=188.2
Q ss_pred EeccCCCCceEEEEECCCC------cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 388 YLGSAAFSKVFQAQDLHTG------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg------~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.||+|+||.||++++.... +.+|+|.+.... .....+.+|+.+++.+ +|+||+++++++......+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~ 75 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF------NHPNIVKLLGVCLLNEPQY 75 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc------CCCCeeeEeeeecCCCCeE
Confidence 5899999999999876443 689999886543 3345667777777766 4789999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC---CCeEEEEec
Q 005590 460 IVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ---RCEIKIIDL 534 (689)
Q Consensus 460 lVmEy~~-g~L~~l~~~~~~~~-~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~---~~~vkL~DF 534 (689)
+||||+. ++|.+++....... ....+++..+..++.||+.||.|||+.+++|+||||+||+++.+. ...++|+||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999998 47777775432211 233478899999999999999999999999999999999998522 127999999
Q ss_pred CCcccccCC-----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcH
Q 005590 535 GSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 608 (689)
Q Consensus 535 Gls~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~ 608 (689)
|++...... ......+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+...
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~------ 229 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG------ 229 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC------
Confidence 998654321 112344678999999999899999999999999999998 99999876555444333100
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.....+ ...+..+.+||.+||..+|.+||+++++++
T Consensus 230 ----------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 230 ----------------------------GRLQKP---------ENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ----------------------------CccCCc---------ccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000011 112356789999999999999999999875
No 355
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.3e-32 Score=281.64 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=196.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~-----tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
.+|++++.||+|+||+||+|+.+. ..+.+++|.+..... ....+.+|+++++.++ |+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS------HKNVVRLLGLCR 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC------CcceeeeEEEEC
Confidence 679999999999999999999653 356799998865432 3466788999988875 679999999999
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~---~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
.....++||||+. ++|.+++....... ....+++..+..++.||+.||.|||+.+|+||||||+||+++. ++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~ 156 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS--QREV 156 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcE
Confidence 8899999999998 57777775443111 1124899999999999999999999999999999999999985 7789
Q ss_pred EEEecCCcccccCC----ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcC
Q 005590 530 KIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 530 kL~DFGls~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g 604 (689)
+|+|||++...... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||........+..+...
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~-- 234 (275)
T cd05046 157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG-- 234 (275)
T ss_pred EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--
Confidence 99999987643221 122345677999999988889999999999999999999 88999765444433332100
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
......+ ...+..+.++|.+||+.+|++|||+.|+++.
T Consensus 235 -------------------------------~~~~~~~---------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 235 -------------------------------KLELPVP---------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -------------------------------CcCCCCC---------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0000001 1223568899999999999999999999875
No 356
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.7e-32 Score=278.36 Aligned_cols=238 Identities=20% Similarity=0.262 Sum_probs=184.1
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~--~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||.||+|.+. ..+..||+|++.... .....+.+|+.+++.++ |+||+++++++. ....++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD------NPYIVRMIGVCE-AEALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC------CCCeEEEEEEEc-CCCeEEEEE
Confidence 3899999999999764 445679999987643 23456778888888774 689999999875 457899999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+.+ +|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 75 MASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN--QHYAKISDFGLSKALGA 147 (257)
T ss_pred eCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC--CCcEEeccCCccccccC
Confidence 9985 6666654322 23889999999999999999999999999999999999984 77899999999875433
Q ss_pred Ccc----c--cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 543 NLC----L--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 543 ~~~----~--~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
... . ..++..|+|||.+.+..++.++|+|||||++|+|++ |..||......+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------------ 215 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK------------ 215 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC------------
Confidence 211 1 122467999999998889999999999999999996 999998765555443332110
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...+|. ..++++.++|.+||..+|++||++.++++.
T Consensus 216 ----------------------~~~~~~---------~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 216 ----------------------RLDCPA---------ECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred ----------------------CCCCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 001111 124678899999999999999999998753
No 357
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6e-32 Score=280.57 Aligned_cols=240 Identities=19% Similarity=0.234 Sum_probs=176.8
Q ss_pred EEeccCCCCceEEEEECC------------CCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 387 EYLGSAAFSKVFQAQDLH------------TGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~------------tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
+.||+|+||.||+++... ....+++|++..... ....+..|+.+++.+ .||||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l------~hp~iv~~~~~~~ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV------SHKHIVLLYGVCV 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC------CCCCEeeEEEEEe
Confidence 368999999999998432 233588898765432 223455566666655 4789999999999
Q ss_pred eCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC-----Ce
Q 005590 454 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-----CE 528 (689)
Q Consensus 454 ~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~-----~~ 528 (689)
.....++||||+.++.++.+..... ..+++..+..++.||+.||.|||+.||+||||||+|||++.+.. ..
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCce
Confidence 9899999999999755444432211 23888999999999999999999999999999999999974221 24
Q ss_pred EEEEecCCcccccCCccccccCccccChhhhc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 529 IKIIDLGSSCFQTDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 529 vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~-~~~~s~~~DIwSLGvil~eLl-tG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
++++|||++...... ....++..|+|||++. +..++.++|||||||++|+|+ +|..||......+......
T Consensus 151 ~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~------ 223 (262)
T cd05077 151 IKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE------ 223 (262)
T ss_pred eEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh------
Confidence 899999998654322 2345788899999987 466899999999999999998 5888887643322211000
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
. ... .. .....++.+||.+||+.||++||++.++|++
T Consensus 224 ----------------~------------~~~--~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 224 ----------------G------------QCM--LV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----------------c------------Ccc--CC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0 000 00 0112457899999999999999999999975
No 358
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.4e-32 Score=278.87 Aligned_cols=237 Identities=22% Similarity=0.281 Sum_probs=181.0
Q ss_pred EEeccCCCCceEEEEECCCC----------cEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 387 EYLGSAAFSKVFQAQDLHTG----------VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg----------~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
+.||+|+||.||+|.+..++ ..+++|++.........+.+|+.+++.+ .|+||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL------SHKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC------CCcchhheeeEEec-C
Confidence 36899999999999987766 3588888776543345666777777665 47899999999888 7
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC-----CeEE
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-----CEIK 530 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~-----~~vk 530 (689)
..++||||+.+ +|.+++..... .++...+..++.||+.||.|||+.||+||||||+|||++.+.. ..++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEE
Confidence 78999999985 56666554321 3888999999999999999999999999999999999985321 1799
Q ss_pred EEecCCcccccCCccccccCccccChhhhcCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 531 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 531 L~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~--~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|+|||++..... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||.............
T Consensus 149 l~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~------- 220 (259)
T cd05037 149 LSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ------- 220 (259)
T ss_pred eCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-------
Confidence 999999876544 2234567789999999876 78999999999999999999 578886543222111100
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.....+.. ....+.+||.+||..+|++|||+.++++
T Consensus 221 -----------------------------~~~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 221 -----------------------------DQHRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -----------------------------cCCCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00001100 0145789999999999999999999986
No 359
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-31 Score=280.29 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=192.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+|++.+.||+|+||+||+|.+..+|+ .+|+|.+.... .....+.+|+.+++.+ .|+||+++++++.
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~ 79 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV------DHPHVVRLLGICL 79 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEe
Confidence 4689999999999999999999876665 58999887653 2345666788888776 4789999999988
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
. ...++||||+. ++|.+++..... .+++..+..++.||+.||.|||+.||+|+||||+||+++. ++.+||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kL~ 151 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT--PQHVKIT 151 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC--CCeEEEC
Confidence 7 78999999997 467776653321 2889999999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccCCccc-----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||.+......... ..++..|+|||.+....++.++|+|||||++|++++ |..||......+....+....
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--- 228 (279)
T cd05057 152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE--- 228 (279)
T ss_pred CCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC---
Confidence 99998765432211 122467999999988889999999999999999998 999998776555444332100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
....|. ..+..+.+++.+||..||.+|||+.++++
T Consensus 229 -------------------------------~~~~~~---------~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 229 -------------------------------RLPQPP---------ICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -------------------------------CCCCCC---------CCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 000111 12345789999999999999999999874
No 360
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.5e-32 Score=280.73 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=194.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECC----CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~----tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
-.++|++.+.||+|+||.||+|.+.. ++..|++|++... ......+.+|+.+++.+ .|+||+++++++
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l------~h~ni~~~~~~~ 77 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL------SHQNILPILHVC 77 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC------CCCCCCeEEEEE
Confidence 35789999999999999999999865 3688999988753 23345566777777766 478999999987
Q ss_pred Ee-CCeEEEEEEccc-cchHHHHhhhhccC--CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCe
Q 005590 453 YH-LEHLFIVCELLR-ANLYEFQKFNQESG--GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 528 (689)
Q Consensus 453 ~~-~~~l~lVmEy~~-g~L~~l~~~~~~~~--~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~ 528 (689)
.. ....+++++|+. ++|.+++....... ....+++..+..++.||+.||.|||+.+++|+||||+||+++. ++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~--~~~ 155 (280)
T cd05043 78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE--ELQ 155 (280)
T ss_pred ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC--CCc
Confidence 65 467899999997 57777765432211 1134889999999999999999999999999999999999984 788
Q ss_pred EEEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 005590 529 IKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 602 (689)
Q Consensus 529 vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~ 602 (689)
+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|++++ |+.||...+..+....+...
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence 9999999987543221 11234667999999999899999999999999999999 99999876555443332210
Q ss_pred cCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 603 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 603 ~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
. .++.. ...+..+.++|.+||..||++|||+.++++
T Consensus 236 ~------------------------------------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 236 Y------------------------------------RLAQP-------INCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred C------------------------------------CCCCC-------CcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 00000 012356889999999999999999999985
No 361
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-32 Score=283.40 Aligned_cols=239 Identities=19% Similarity=0.300 Sum_probs=180.1
Q ss_pred EEeccCCCCceEEEEECCCCc-------EEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 387 EYLGSAAFSKVFQAQDLHTGV-------DVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~-------~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+.||+|+||+||+|.+...+. .+|+|++.... ...+.+..|..+++.+ +|+||+++++++......
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~------~h~~iv~~~~~~~~~~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL------SHKHLVLNYGVCVCGDES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC------CCCChhheeeEEEeCCCc
Confidence 368999999999998765544 38888876543 2334556677776655 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC------CeEEE
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR------CEIKI 531 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~------~~vkL 531 (689)
++||||+.+ +|..++..... .+++..+..++.||+.||.|||+.||+||||||+||+++.+.. +.+++
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 999999986 56666653322 3788889999999999999999999999999999999985322 24899
Q ss_pred EecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 532 IDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTG-EVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 532 ~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG-~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+|||.+..... .....+++.|+|||++.+ ..++.++|+|||||++|+|++| .+||.............
T Consensus 150 ~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~--------- 219 (258)
T cd05078 150 SDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE--------- 219 (258)
T ss_pred cccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH---------
Confidence 99998865433 223567889999999986 4588999999999999999998 56665443322211110
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....+|. .....+.+||.+||+.||++|||++++++.
T Consensus 220 ---------------------------~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 220 ---------------------------DRHQLPA---------PKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ---------------------------ccccCCC---------CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0011111 112457899999999999999999999874
No 362
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.4e-31 Score=274.29 Aligned_cols=239 Identities=24% Similarity=0.345 Sum_probs=186.3
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
++||+|+||.||++.. .++..+|+|++.... .....+.+|+.+++.+ +|+||+++++++......++||||
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQY------DHPNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCCcCeEEEEEecCCccEEEEEC
Confidence 3689999999999985 468899999987542 2233566777777766 478999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC
Q 005590 465 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 543 (689)
Q Consensus 465 ~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 543 (689)
+.+ +|.+++.... ..+.+..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++......
T Consensus 74 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 74 VPGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC--CCeEEECCCccceecccc
Confidence 985 6666654221 12788999999999999999999999999999999999984 778999999998654332
Q ss_pred cc----ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 005590 544 LC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 618 (689)
Q Consensus 544 ~~----~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~ 618 (689)
.. ...++..|+|||++.+..++.++|+||||+++|+|++ |..||...........+....
T Consensus 147 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~--------------- 211 (250)
T cd05085 147 IYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY--------------- 211 (250)
T ss_pred ccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 21 1233567999999998889999999999999999998 999998765544433332100
Q ss_pred hhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 619 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....+ ...+..+.+|+.+||..+|++|||+.|+++.
T Consensus 212 -------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 212 -------------------RMSCP---------QKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred -------------------CCCCC---------CCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 00011 1123568899999999999999999999863
No 363
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-31 Score=279.91 Aligned_cols=262 Identities=21% Similarity=0.282 Sum_probs=189.2
Q ss_pred CcEEEEEEeccCCCCceEEEE----ECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~----d~~tg~~vAvKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.+|++++.||+|+||.||++. +..+++.||+|.+.... .....+.+|+++++.++ |+||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ------HDNIVKYKGVCYSA 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCeeEEEEEEccC
Confidence 579999999999999999997 45678999999987543 33456678888888764 78999999987543
Q ss_pred --CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 456 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 456 --~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
..+++||||+. ++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~--~~~~~l~ 150 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES--ENRVKIG 150 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC--CCeEEEC
Confidence 46899999997 57877765332 12788999999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccCCccc------cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~~~------~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++......... ..++..|+|||++.+..++.++|+|||||++|+|++|..|+..... .....+ +..
T Consensus 151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~----~~~ 225 (284)
T cd05081 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMM----GND 225 (284)
T ss_pred CCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhc----ccc
Confidence 99998765432211 1233459999999988899999999999999999999887654322 111111 110
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..... ....+..... . ....+.. ...+..+.+||.+||..+|++|||+.|+++.
T Consensus 226 ~~~~~-~~~~~~~~~~------------~--~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 226 KQGQM-IVYHLIELLK------------N--NGRLPAP-------PGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ccccc-chHHHHHHHh------------c--CCcCCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 00000 0000000000 0 0011110 1224568899999999999999999999863
No 364
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.2e-31 Score=278.20 Aligned_cols=247 Identities=20% Similarity=0.256 Sum_probs=180.6
Q ss_pred EeccCCCCceEEEEECC--CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~--tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||+||+|.... ....+|+|.+.... .....+.+|+.+++.+ +|+||+++++.+......++|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL------NHPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC------CCCCcceEEEEECCCCceEEEEE
Confidence 58999999999996432 44578888776432 2234556777777655 47899999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+.+ +|.+++...... .....++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC--CCcEEEecccccccccc
Confidence 9985 777776544321 1222567788899999999999999999999999999999985 78899999999864322
Q ss_pred C-----ccccccCccccChhhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 543 N-----LCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 543 ~-----~~~~~gt~~Y~APE~l~~-------~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
. .....+++.|+|||++.. ..++.++|||||||++|+|++ |..||......+.+..+.....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~----- 227 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD----- 227 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC-----
Confidence 1 112345677999999743 357889999999999999999 8899987665554444321110
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..++... .....+..+.+++..|+ .||++|||++++++-
T Consensus 228 -----------------------------~~~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 228 -----------------------------IKLPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred -----------------------------ccCCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0000000 00123355778899888 599999999999863
No 365
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-31 Score=278.88 Aligned_cols=249 Identities=19% Similarity=0.247 Sum_probs=188.9
Q ss_pred EEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 383 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~---~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
|++.+.||+|+||.||+|.+. .+++.+|||++..+. ...+++.+|+++++.++ ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD------HPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC------CCCcceEEEEEccCC
Confidence 567889999999999999864 357899999987642 23455667887777664 789999999886542
Q ss_pred ------eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 457 ------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 457 ------~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
..++++||+. +++.+++...........++...++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~ 152 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTV 152 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCE
Confidence 2478899997 466655543222222234788899999999999999999999999999999999984 7789
Q ss_pred EEEecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 005590 530 KIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 530 kL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~ 603 (689)
||+|||++....... ....+++.|++||.+.+..++.++|||||||++|+|++ |.+||......+....+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05074 153 CVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN 232 (273)
T ss_pred EECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987643221 22334568999999998889999999999999999999 899998766554443332100
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
....+ ......+.+++.+||+.+|++|||+.+++++
T Consensus 233 ----------------------------------~~~~~---------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 233 ----------------------------------RLKQP---------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ----------------------------------cCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00000 0123568899999999999999999999864
No 366
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7e-32 Score=282.77 Aligned_cols=260 Identities=22% Similarity=0.278 Sum_probs=190.1
Q ss_pred cEEEEEEeccCCCCceEEEEE----CCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 382 RYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d----~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
-|++++.||+|+||.||+++. ..+++.||+|.++.. ......+.+|+.+++.+. |+||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY------HENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC------CCCeeeeeeEEecC
Confidence 478999999999999999974 457889999998754 233456778888888774 67999999998865
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 456 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 456 --~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
...++||||+.+ +|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++.++|+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~ 151 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIG 151 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEEC
Confidence 578999999974 6776664322 12788999999999999999999999999999999999984 7789999
Q ss_pred ecCCcccccCCc------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++....... ....++..|+|||.+.+..++.++|||||||++|+|+++..|+.... ....+..++.
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~-----~~~~~~~~~~ 226 (284)
T cd05079 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM-----TLFLKMIGPT 226 (284)
T ss_pred CCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc-----chhhhhcccc
Confidence 999987543321 12345667999999998889999999999999999999887654321 1111222222
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
..+..... ...... ... ..+.. ...+..+.+||.+||+.||++|||+.+++++
T Consensus 227 ~~~~~~~~--~~~~~~------------~~~--~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 227 HGQMTVTR--LVRVLE------------EGK--RLPRP-------PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cccccHHH--HHHHHH------------cCc--cCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 21110000 000000 000 01100 1134668999999999999999999999864
No 367
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.2e-31 Score=280.28 Aligned_cols=238 Identities=20% Similarity=0.246 Sum_probs=175.7
Q ss_pred EeccCCCCceEEEEECCC------------------------CcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCC
Q 005590 388 YLGSAAFSKVFQAQDLHT------------------------GVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADE 442 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~t------------------------g~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h 442 (689)
.||+|+||.||+|....+ ...|++|++..... ....+.+|+.+++.+ .|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l------~h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV------SH 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC------CC
Confidence 589999999999974321 24588888865432 223445555555544 57
Q ss_pred CceeEEEEEEEeCCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE
Q 005590 443 HHILRLYDYFYHLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 521 (689)
Q Consensus 443 ~~Iv~l~~~f~~~~~l~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl 521 (689)
+||+++++++......++||||+.++ |..++.... ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 89999999999999999999999965 444443211 237888999999999999999999999999999999999
Q ss_pred eccC-----CCeEEEEecCCcccccCCccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCChHHH
Q 005590 522 KSYQ-----RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVM 594 (689)
Q Consensus 522 ~~~~-----~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLl-tG~~PF~~~~~~~ 594 (689)
+... ...++|+|||.+...... ....++..|+|||.+.+ ..++.++|+|||||++|+|+ +|..||......+
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred eccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 7522 235899999987544322 22356788999999875 56899999999999999995 6999997654433
Q ss_pred HHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc
Q 005590 595 ILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP 674 (689)
Q Consensus 595 ~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp 674 (689)
....+. ....+|.. ..+.+.+||.+||+.+|++||
T Consensus 230 ~~~~~~------------------------------------~~~~~~~~---------~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 230 KERFYE------------------------------------KKHRLPEP---------SCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred HHHHHH------------------------------------hccCCCCC---------CChHHHHHHHHHcccChhhCc
Confidence 221110 00011110 124578999999999999999
Q ss_pred CHHHHHcC
Q 005590 675 TAREALDH 682 (689)
Q Consensus 675 Ta~ElL~h 682 (689)
|+.++|++
T Consensus 265 s~~~il~~ 272 (274)
T cd05076 265 SFRTILRD 272 (274)
T ss_pred CHHHHHHh
Confidence 99999975
No 368
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.8e-33 Score=319.02 Aligned_cols=253 Identities=30% Similarity=0.419 Sum_probs=187.4
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 454 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~-- 454 (689)
...+|+.++.||+||||.||+++++-+|+.||||.++.. ......+.+|+++|.+|+ |||||+++..+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn------HpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN------HPNVVRYYSAWVEST 550 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC------CcceeeeehhhhccC
Confidence 346788899999999999999999999999999999865 445567888999998886 5677777655400
Q ss_pred --------------------------------------------------------------------------------
Q 005590 455 -------------------------------------------------------------------------------- 454 (689)
Q Consensus 455 -------------------------------------------------------------------------------- 454 (689)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred -----------------------------C--------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHH
Q 005590 455 -----------------------------L--------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 497 (689)
Q Consensus 455 -----------------------------~--------~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QI 497 (689)
. ..+||-||||+..++..+....... --...++++++||
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreI 706 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREI 706 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHH
Confidence 0 1368899999976555444332210 1356799999999
Q ss_pred HHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccccc--------------------C-CccccccCccccCh
Q 005590 498 LEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT--------------------D-NLCLYVQSRSYRAP 556 (689)
Q Consensus 498 l~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~--------------------~-~~~~~~gt~~Y~AP 556 (689)
++||.|+|++|||||||||.||+++. ++.|||+|||+++... + ..+..+||--|+||
T Consensus 707 lEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 707 LEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999994 8889999999987511 0 12346889999999
Q ss_pred hhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCChHH-HHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhh
Q 005590 557 EVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAVV-MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINE 632 (689)
Q Consensus 557 E~l~~~~---~s~~~DIwSLGvil~eLltG~~PF~~~~~~-~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 632 (689)
|++.+.. |+.++||||||+|||||+. ||...-.. ..+..+. -|.+|
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR--~g~iP------------------------- 834 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR--KGSIP------------------------- 834 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc--cCCCC-------------------------
Confidence 9997654 9999999999999999984 57543222 1222221 11111
Q ss_pred ccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 633 ETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 633 ~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
....+. ...-+.-..+|+.||+.||.+||||.|||++.||.
T Consensus 835 ----------~~~~f~---~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 835 ----------EPADFF---DPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred ----------CCcccc---cccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 110000 00012235899999999999999999999999986
No 369
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=302.03 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=213.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~----~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+.+++..||-|+||.|-++........+|+|++++ +......+..|.+||..++. ++|+++|..|.+..
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s------~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS------DFIVRLYRTFRDSK 493 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc------hHHHHHHHHhccch
Confidence 567888899999999999998665555689999876 34456777888899988863 69999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
++|++||-|- |.++..++..+ .|....++.++..+++|+.|||.+|||+|||||+|+|++. +|-+||.|||
T Consensus 494 yvYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFG 565 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFG 565 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeehh
Confidence 9999999986 46777766443 2888999999999999999999999999999999999994 8999999999
Q ss_pred CcccccCC--ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 005590 536 SSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 536 ls~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+|+..... .-++||||.|.|||+++++..+.++|.||||+++||||+|.+||.+.++...+..|.+.+..+
T Consensus 566 FAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------- 638 (732)
T KOG0614|consen 566 FAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------- 638 (732)
T ss_pred hHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-------
Confidence 99987654 345899999999999999999999999999999999999999999999998888887443211
Q ss_pred hhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC-----HHHHHcCCCCCC
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT-----a~ElL~hpwf~~ 687 (689)
.+|. .......+||+++...+|.+|.. +.++-+|.||.+
T Consensus 639 --------------------------~~Pr---------~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 639 --------------------------EFPR---------RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred --------------------------hccc---------ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 1121 12234679999999999999997 899999999964
No 370
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.1e-31 Score=276.65 Aligned_cols=246 Identities=20% Similarity=0.217 Sum_probs=181.7
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~--~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||.||+|.+. .++..+|+|.++... .....+.+|+.+++.+ +||||+++++++......++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL------QHSNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC------CCCCEeeEEEEEcCCCCcEEEEE
Confidence 5899999999999754 456789999887543 2234566777777766 47899999999999999999999
Q ss_pred ccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+. ++|.+++..... ......+...++.++.|++.||.|||+.+++|+||||+||+++. ++.++|+|||.+.....
T Consensus 76 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRK-AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccC
Confidence 998 567777654322 11223567788899999999999999999999999999999985 77899999999865432
Q ss_pred Cc-----cccccCccccChhhhcCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 543 NL-----CLYVQSRSYRAPEVIIGL-------PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 543 ~~-----~~~~gt~~Y~APE~l~~~-------~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
.. ....++..|+|||++.+. .++.++|+|||||++|+|++ |..||......+.........
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------ 226 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ------ 226 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc------
Confidence 21 123567789999998642 35789999999999999996 999997765444332221000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......|.. .......+.++|+.|+ .+|++|||++||++
T Consensus 227 --------------------------~~~~~~~~~------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 227 --------------------------QLKLPKPRL------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------------------cCCCCCCcc------CCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000000110 0112345789999998 68999999999985
No 371
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.2e-31 Score=282.30 Aligned_cols=246 Identities=21% Similarity=0.254 Sum_probs=187.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 453 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~ 453 (689)
..+|++.+.||+|+||.||++.+..+|+ .+|+|++.... .....+.+|+.+++.+ .|+||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~ 79 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM------DHPHLVRLLGVCL 79 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcccEEEEEc
Confidence 3678999999999999999999877776 57888887542 2223456677776665 4789999999886
Q ss_pred eCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEE
Q 005590 454 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 532 (689)
Q Consensus 454 ~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~ 532 (689)
.. ..++|+||+. |+|.+++..... .+++..+..++.||+.||.|||+.||+|+||||+||+++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~--~~~~kL~ 151 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS--PNHVKIT 151 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC--CCceEEc
Confidence 54 4678999998 567777654321 2788899999999999999999999999999999999984 6789999
Q ss_pred ecCCcccccCCc-----cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 533 DLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 533 DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+...
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---- 227 (303)
T cd05110 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG---- 227 (303)
T ss_pred cccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC----
Confidence 999987643221 11234678999999999999999999999999999997 99999775443332222100
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...+.. ...+..+.++|.+||..+|++||++.++++.
T Consensus 228 --------------------------------~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 228 --------------------------------ERLPQP-------PICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred --------------------------------CCCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000000 0123457899999999999999999998864
No 372
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.98 E-value=2.2e-31 Score=274.76 Aligned_cols=240 Identities=20% Similarity=0.285 Sum_probs=178.8
Q ss_pred EEeccCCCCceEEEEECC---CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-eCCeEEE
Q 005590 387 EYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFI 460 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~---tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~-~~~~l~l 460 (689)
+.||+|+||.||+|.+.. .+..+|+|.+... ......+.+|+.+++.+ +||||+++++++. .....++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF------SHPNVLSLLGICLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC------CCCCcceEEEEeecCCCCcEE
Confidence 358999999999998643 3457999988542 22344566677666554 5789999999765 4556899
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
||||+. ++|.+++..... .++...+..++.||+.||.|||+.+++||||||+|||++. ++.+||+|||++..
T Consensus 75 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~~~ 147 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLARD 147 (262)
T ss_pred EEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCcccccc
Confidence 999998 467777653221 1567778889999999999999999999999999999984 77899999999875
Q ss_pred ccCC-------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 540 QTDN-------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 540 ~~~~-------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||......+....+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--------- 218 (262)
T cd05058 148 IYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--------- 218 (262)
T ss_pred ccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC---------
Confidence 4321 112345678999999998899999999999999999999 56777765544433322100
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
.....+ ...+..+.+++.+||..+|++||++.++++.
T Consensus 219 -------------------------~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 219 -------------------------RRLLQP---------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred -------------------------CCCCCC---------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 000001 1123468899999999999999999999863
No 373
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=5.2e-33 Score=307.46 Aligned_cols=273 Identities=25% Similarity=0.328 Sum_probs=202.4
Q ss_pred eeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 374 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 374 ~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
.+...-+.-|...+.||+|+||.||+++++.+|+.||||.++.. ....+.+.+|+++|++++ |+|||++.++
T Consensus 6 ~l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn------h~NIVk~f~i 79 (732)
T KOG4250|consen 6 VLTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN------HPNIVKLFDI 79 (732)
T ss_pred ccccCCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC------chhhhhhccc
Confidence 33334456788889999999999999999999999999999863 345678899999999996 5799999988
Q ss_pred EEeC------CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc
Q 005590 452 FYHL------EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 524 (689)
Q Consensus 452 f~~~------~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~ 524 (689)
-... ....+|||||.| +|...+...... .-+++.++..++..+..||.|||++||+||||||.||++-.+
T Consensus 80 ee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~---~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~G 156 (732)
T KOG4250|consen 80 EETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENA---YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIG 156 (732)
T ss_pred CCccccCcccccceEEEeecCCCcHHHHhcCcccc---cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeec
Confidence 6543 367899999985 676666543322 239999999999999999999999999999999999998765
Q ss_pred CCC--eEEEEecCCcccccCC--ccccccCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCh----HHHH
Q 005590 525 QRC--EIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDA----VVMI 595 (689)
Q Consensus 525 ~~~--~vkL~DFGls~~~~~~--~~~~~gt~~Y~APE~l~~-~~~s~~~DIwSLGvil~eLltG~~PF~~~~----~~~~ 595 (689)
.+| ..||+|||.|+-..+. ....+||+.|.+||++.. +.|+..+|+||+||++|++.||..||-... ..+.
T Consensus 157 edgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~ 236 (732)
T KOG4250|consen 157 EDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEI 236 (732)
T ss_pred CCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchh
Confidence 544 4699999999987654 456899999999999994 789999999999999999999999995432 2222
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCc
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP 674 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRp 674 (689)
...+.. .+ |.......+ ........+...+|....+.... ...+-.++..||.++|++|.
T Consensus 237 ~~~~~t--kk-p~~v~i~~~-------------~~eNgpv~~s~~lP~p~~Ls~~l---~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 237 MWHIIT--KK-PSGVAIGAQ-------------EEENGPVEWSSTLPQPNHLSRGL---ATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred hhhhhc--cC-CCceeEeee-------------cccCCceeeeccCCCcccccHHH---HhhhhHHHHHHHhhhHHHhC
Confidence 222210 01 100000000 00111223445555544433222 23466789999999999999
No 374
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.8e-32 Score=294.06 Aligned_cols=197 Identities=22% Similarity=0.351 Sum_probs=166.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC-eE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-HL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~-~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~-~l 458 (689)
+.|.-...||+|+||.||+|.- ..|..||||.+...... ..++.+|+.++..++ |+||+++++||.+.+ +.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~------H~Nlv~LlGyC~e~~~~~ 147 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR------HPNLVKLLGYCLEGGEHR 147 (361)
T ss_pred hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC------CcCcccEEEEEecCCceE
Confidence 5667777899999999999985 45589999988765543 456889999988875 679999999999888 59
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCcEEEeccCCCeEEEEec
Q 005590 459 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG---IIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 459 ~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g---IvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+||+|||. |+|.+.+...... .+++..+..|+.++++||.|||... |||||||++|||++ .+...||+||
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD--~~~~aKlsDF 221 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD--EDFNAKLSDF 221 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC--CCCCEEccCc
Confidence 99999998 5777766543221 5899999999999999999999854 99999999999999 4889999999
Q ss_pred CCcccccC-Cccc--c-ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005590 535 GSSCFQTD-NLCL--Y-VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 590 (689)
Q Consensus 535 Gls~~~~~-~~~~--~-~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~ 590 (689)
|+|+.... .... . .||.+|+|||.+..+..+.++||||+|++|.||+||+.|....
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 99976543 2222 2 7999999999999888999999999999999999999887643
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.8e-32 Score=303.53 Aligned_cols=256 Identities=25% Similarity=0.393 Sum_probs=210.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-----
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----- 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~----- 454 (689)
.+.|.|.+.||.|.+|+||+++++.+++..|+||...+.+....+..|.+||+.+. .|||++.+|++|.-
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-----~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-----HHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-----CCCCcceEEEEEEEecCCC
Confidence 46799999999999999999999999999999999988777788888889998876 48999999999973
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.+.++||||||+| +..++++... ...+.+..+..|++.++.||.+||...++|||||-.|||++. ++.|||+|
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~--e~~VKLvD 166 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE--NAEVKLVD 166 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec--cCcEEEee
Confidence 4689999999995 6777776544 233899999999999999999999999999999999999994 89999999
Q ss_pred cCCcccccC---CccccccCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 534 LGSSCFQTD---NLCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 534 FGls~~~~~---~~~~~~gt~~Y~APE~l~~-----~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
||.+...+. ...+.+|||.|||||++.- ..|+..+|+||||++..||.-|.+|+-.-.+..-+..| ...
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I---pRN 243 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRN 243 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC---CCC
Confidence 999887654 3556899999999999963 34888999999999999999999999654433332222 222
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
+|+. +.++. .-..+|.+||..||..|-.+||+..++|+|||+
T Consensus 244 PPPk-Lkrp~-------------------------------------kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 244 PPPK-LKRPK-------------------------------------KWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred CCcc-ccchh-------------------------------------hHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 2211 11111 112458899999999999999999999999998
Q ss_pred CC
Q 005590 686 QH 687 (689)
Q Consensus 686 ~~ 687 (689)
..
T Consensus 286 ~e 287 (953)
T KOG0587|consen 286 TE 287 (953)
T ss_pred cc
Confidence 74
No 376
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.7e-32 Score=295.73 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=204.1
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCCCc---E-EEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCcee
Q 005590 375 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGV---D-VCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHIL 446 (689)
Q Consensus 375 ~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~---~-vAvKii~~----~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv 446 (689)
.+.+..++-.+.++||+|+||.||+|..+..+. . ||+|..+. .+.....+++|.++++.++ |+||+
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~------H~NVV 224 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN------HPNVV 224 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC------CCCEE
Confidence 345556667777999999999999998755422 3 89999874 2456678889999999875 78999
Q ss_pred EEEEEEEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC
Q 005590 447 RLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 525 (689)
Q Consensus 447 ~l~~~f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~ 525 (689)
++|++......++||||+|.| +|.++++.... .++..+...++.+.++||+|||++++|||||-.+|+|++.
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~-- 297 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK-- 297 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC--
Confidence 999999999999999999995 78888876553 2889999999999999999999999999999999999994
Q ss_pred CCeEEEEecCCcccccCCc--c-ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHh
Q 005590 526 RCEIKIIDLGSSCFQTDNL--C-LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 526 ~~~vkL~DFGls~~~~~~~--~-~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~ 601 (689)
+..+||+|||+++...... . ...-...|+|||.+....|+.++||||+||++||+++ |..||++....++.+.|..
T Consensus 298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 6668999999987654211 1 1124568999999999999999999999999999999 8899999988888877741
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
. ..+...|. ..+..+..++..|+..||++|||+.++.+
T Consensus 378 ~---------------------------------~~r~~~~~---------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 378 N---------------------------------GYRMPIPS---------KTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred c---------------------------------CccCCCCC---------CCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 1 11111121 22356778999999999999999998864
No 377
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-32 Score=276.65 Aligned_cols=253 Identities=22% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
-++|.++.+||+|+|++|.+++.+.|.+.||+|+++++ ....+-...|..+..... .||+++-+..+|+..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhccc
Confidence 46899999999999999999999999999999999864 222333445555655544 478999999999999
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 456 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 456 ~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..+++|.||++|+-+-+....++. ++++.++.+...|+.||.|||+.|||+||||.+|||++. .|++||+|+|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda--eghikltdyg 396 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYG 396 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc--CCceeecccc
Confidence 999999999997643333333322 999999999999999999999999999999999999995 8999999999
Q ss_pred Cccc---ccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-------ChHHHHHHHHHhhcCC
Q 005590 536 SSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-------DAVVMILARIIGMLGP 605 (689)
Q Consensus 536 ls~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~-------~~~~~~l~~i~~~~g~ 605 (689)
+.+. .++...+++|||.|.|||++.+..|...+|+|+|||+++||+.|+.||.- .+.++++.+++
T Consensus 397 mcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi----- 471 (593)
T KOG0695|consen 397 MCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI----- 471 (593)
T ss_pred hhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH-----
Confidence 9864 34556779999999999999999999999999999999999999999941 23334444332
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC------HHHH
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREA 679 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT------a~El 679 (689)
..-+..+|...+.. +-.+++..|..||.+|.. ..++
T Consensus 472 -----------------------------lekqiriprslsvk---------as~vlkgflnkdp~erlgc~~~~g~~di 513 (593)
T KOG0695|consen 472 -----------------------------LEKQIRIPRSLSVK---------ASHVLKGFLNKDPKERLGCRPQTGFSDI 513 (593)
T ss_pred -----------------------------hhhcccccceeehh---------hHHHHHHhhcCCcHHhcCCCcccchhhh
Confidence 01123345433322 347899999999999974 7889
Q ss_pred HcCCCCCC
Q 005590 680 LDHPWLQH 687 (689)
Q Consensus 680 L~hpwf~~ 687 (689)
-.|+||+.
T Consensus 514 k~h~ffr~ 521 (593)
T KOG0695|consen 514 KSHAFFRS 521 (593)
T ss_pred hcchhhhh
Confidence 99999974
No 378
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=4.8e-32 Score=293.77 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=197.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.-|..++.||-|+||+|.++....|...||+|.+++.. ......+.|-.||.+.. .+-||+||..|++++
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD------n~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDKD 702 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC------CcceEEEEEEeccCC
Confidence 45899999999999999999998999999999987642 33445566777776654 458999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+|+||+|+.| ++..++..... |.+..++.++..+.+|+.+.|++|+|||||||+||||+. +|+|||+|||
T Consensus 703 nLYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDFG 774 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 774 (1034)
T ss_pred ceEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeecc
Confidence 99999999985 66666654332 889999999999999999999999999999999999995 9999999999
Q ss_pred Cccc---------ccC------------------C------------------ccccccCccccChhhhcCCCCCchhhH
Q 005590 536 SSCF---------QTD------------------N------------------LCLYVQSRSYRAPEVIIGLPYDQKIDL 570 (689)
Q Consensus 536 ls~~---------~~~------------------~------------------~~~~~gt~~Y~APE~l~~~~~s~~~DI 570 (689)
++.- +.. . ....+||+.|+|||++....|....|+
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 8621 000 0 001478999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhh
Q 005590 571 WSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHH 650 (689)
Q Consensus 571 wSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 650 (689)
||.|||||||+.|++||..+.+-+...+++ .|+.. ..+|....
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~------------nw~~~---------------------l~~~~~~~---- 897 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVI------------NWRNF---------------------LHIPYQGN---- 897 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeee------------ehhhc---------------------cccccccc----
Confidence 999999999999999997765444333332 11111 12232222
Q ss_pred ccCCcHHHHHHHHHhcccCCCCCcC---HHHHHcCCCCCC
Q 005590 651 LQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 687 (689)
Q Consensus 651 ~~~~~~~l~dLI~~mL~~dP~kRpT---a~ElL~hpwf~~ 687 (689)
.+.++.+||.++. -+++.|+. ++++-.||||+.
T Consensus 898 ---ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 898 ---LSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred ---cCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence 3466889998765 46777764 778999999975
No 379
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.98 E-value=2.8e-31 Score=276.62 Aligned_cols=260 Identities=22% Similarity=0.305 Sum_probs=192.2
Q ss_pred CcEEEEEEeccCCCCceEEEEEC----CCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~----~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
..|++.+.||+|+||.||+++.. .+++.+|+|++..... ....+.+|+++++.+. |+||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~------~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD------HENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC------CCChheEEeeeec
Confidence 46888999999999999999854 3488999999986544 3567778888887764 6799999999887
Q ss_pred --CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEE
Q 005590 455 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 531 (689)
Q Consensus 455 --~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL 531 (689)
....++||||+.+ +|.+++..... .+++..+..++.||+.||.|||+.||+|+||||+||+++. ++.++|
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l 150 (284)
T cd05038 78 PGGRSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES--EDLVKI 150 (284)
T ss_pred CCCCceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEE
Confidence 5689999999974 77777754332 2888999999999999999999999999999999999985 688999
Q ss_pred EecCCcccccCCcc------ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 005590 532 IDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 605 (689)
Q Consensus 532 ~DFGls~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~ 605 (689)
+|||.+........ ...++..|+|||.+.+..++.++|+|||||++|+|++|..||....... ....++
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~ 225 (284)
T cd05038 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGI 225 (284)
T ss_pred cccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh-----cccccc
Confidence 99999876553211 1233556999999998899999999999999999999999986532211 111111
Q ss_pred CcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 606 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 606 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
...... ......... .. ...+.. ...+..+.+|+.+||+.+|++|||+.|+++
T Consensus 226 ~~~~~~--~~~~~~~~~------------~~--~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 226 AQGQMI--VTRLLELLK------------EG--ERLPRP-------PSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cccccc--HHHHHHHHH------------cC--CcCCCC-------ccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 100000 000000000 00 001110 112356889999999999999999999985
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=1.1e-30 Score=271.69 Aligned_cols=245 Identities=17% Similarity=0.194 Sum_probs=178.4
Q ss_pred EeccCCCCceEEEEECCC--CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEE
Q 005590 388 YLGSAAFSKVFQAQDLHT--GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 463 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~t--g~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmE 463 (689)
.||+|+||+||+++.... ...+++|.+.... .....+.+|+.+++.+ .||||+++++.+......++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL------QHPNILQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc------CCcchhheEEEecCCCccEEEEe
Confidence 589999999999975332 3356677765432 2334566666666654 57899999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccC
Q 005590 464 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 464 y~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+.+ +|.+++...... ...+++..++.++.||+.||.|||+.+++||||||+|||++. ++.++|+|||++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGIGPSRYK 151 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEecccccccccCc
Confidence 9984 777777543221 123667788899999999999999999999999999999984 78899999998754221
Q ss_pred -----CccccccCccccChhhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 543 -----NLCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 543 -----~~~~~~gt~~Y~APE~l~~-------~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
......++..|+|||++.. ..++.++|||||||++|+|++ |..||......+.+..+......
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---- 227 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV---- 227 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc----
Confidence 1123467889999999753 245789999999999999997 57889776655555443211000
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
......++ ...++.+.++|..|| .+|++||+++++++
T Consensus 228 -------------------------~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 228 -------------------------KLFKPQLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred -------------------------ccCCCccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 00000001 112356788999999 78999999999975
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-33 Score=275.70 Aligned_cols=264 Identities=24% Similarity=0.347 Sum_probs=204.1
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
+.-.++.+-+..||.|+||+|++..++.+|+..|||.++... ....+++.|.....+-. ..|+||++|+....
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-----~cp~IVkfyGa~F~ 134 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-----NCPNIVKFYGALFS 134 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-----CCcHHHHHhhhhhc
Confidence 333455666678999999999999999999999999997543 23445556665544433 47899999999999
Q ss_pred CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.+-.+|.||+|+-++..+.+.-.... ...+++..+-.|....+.||.||.. ..||||||||+|||+++ .|.|||||
T Consensus 135 EGdcWiCMELMd~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr--~G~vKLCD 211 (361)
T KOG1006|consen 135 EGDCWICMELMDISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR--HGDVKLCD 211 (361)
T ss_pred CCceeeeHHHHhhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec--CCCEeeec
Confidence 99999999999988766655433222 2238899999999999999999996 48999999999999995 88999999
Q ss_pred cCCcccccCCc--cccccCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcH
Q 005590 534 LGSSCFQTDNL--CLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDL 608 (689)
Q Consensus 534 FGls~~~~~~~--~~~~gt~~Y~APE~l~~--~~~s~~~DIwSLGvil~eLltG~~PF~~~-~~~~~l~~i~~~~g~~~~ 608 (689)
||.+....+.. +.-.|...|||||.+.. ..|+.++|+||||++|||+.||+.||..- +..+++..++ .|.+|.
T Consensus 212 FGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~ 289 (361)
T KOG1006|consen 212 FGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPI 289 (361)
T ss_pred ccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCe
Confidence 99987765543 33578889999999964 45999999999999999999999999874 4445554443 122221
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
......-...+..|+.||.-||..|-+.||...+|+++||+.
T Consensus 290 ------------------------------------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 290 ------------------------------------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred ------------------------------------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 000111112345689999999999999999999999999975
No 382
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-31 Score=306.07 Aligned_cols=251 Identities=20% Similarity=0.336 Sum_probs=200.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC-C----cEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHT-G----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~t-g----~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
...-+..+.||+|+||.||.|..... | ..||||.++.. ......+++|..+|..+ +||||+++++++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f------~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF------DHPNIVSLIGVC 764 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCcceeeEEEee
Confidence 45678888999999999999986433 2 34899998865 34456677777777766 578999999999
Q ss_pred EeCCeEEEEEEccc-cchHHHHhhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 453 YHLEHLFIVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 453 ~~~~~l~lVmEy~~-g~L~~l~~~~~~~~-~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
......+|++|||. |+|+.+++..+... ....++..++..++.||++|+.||+++++|||||..+|+||+. ...||
T Consensus 765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VK 842 (1025)
T KOG1095|consen 765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE--RRVVK 842 (1025)
T ss_pred cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc--cCcEE
Confidence 99999999999999 58999988663222 2344999999999999999999999999999999999999995 68899
Q ss_pred EEecCCcccccCCcccc-----ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcC
Q 005590 531 IIDLGSSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 531 L~DFGls~~~~~~~~~~-----~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g 604 (689)
|+|||+|+...+..... .-...|||||.+....++.++|||||||++||++| |..||++.+..+++......
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-- 920 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-- 920 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC--
Confidence 99999998543332221 23467999999999999999999999999999999 99999998888877644311
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.+...|. ..+..+.++|..||+.+|++||+...+++
T Consensus 921 --------------------------------gRL~~P~---------~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 921 --------------------------------GRLDPPS---------YCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --------------------------------CccCCCC---------CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 1111111 12344669999999999999999999986
No 383
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.1e-31 Score=282.37 Aligned_cols=293 Identities=27% Similarity=0.404 Sum_probs=214.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECC---CCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~---tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+.+.|.++++||.|.|++||++.+.. ..+.||+|.+.... ...++.+|+++|..+... .||+++.+++..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~-----~ni~~~~~~~rn 106 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGS-----DNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccc-----hhhhcchhhhcc
Confidence 345679999999999999999999876 78899999887543 246788999999999754 599999999999
Q ss_pred CCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.++..+||||++.. ..++... ++...++.+++.++.||.++|.+|||||||||+|+|.+. ..+.-.|+|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEe
Confidence 99999999999964 3333321 778899999999999999999999999999999999986 577789999
Q ss_pred cCCcccc-----------------cC----------------C--------------ccccccCccccChhhhcCCC-CC
Q 005590 534 LGSSCFQ-----------------TD----------------N--------------LCLYVQSRSYRAPEVIIGLP-YD 565 (689)
Q Consensus 534 FGls~~~-----------------~~----------------~--------------~~~~~gt~~Y~APE~l~~~~-~s 565 (689)
||++... .. . .....||++|+|||++...+ .+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 9987510 00 0 00137899999999997654 77
Q ss_pred chhhHHHHHHHHHHHHhCCCCC-CCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhcccccccc----
Q 005590 566 QKIDLWSLGCILAELWTGEVLF-PNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYI---- 640 (689)
Q Consensus 566 ~~~DIwSLGvil~eLltG~~PF-~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 640 (689)
.++||||.|||+.-++++..|| ...+..+.+.+|+-.+|.-...-........-.+.+ .......+....++..
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k-sn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQK-SNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecc-ccccccHHHHhchhccChhh
Confidence 8999999999999999999998 455666777888888886444332211111001110 0000000000000000
Q ss_pred CCc----cchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 641 IPE----ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 641 ~p~----~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
+.. ....+.-....+..+.+|+.+||..||.+|+||+++|+||||..
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 000 01112223344567899999999999999999999999999974
No 384
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=300.57 Aligned_cols=246 Identities=30% Similarity=0.406 Sum_probs=190.9
Q ss_pred EEeccCCCC-ceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcc
Q 005590 387 EYLGSAAFS-KVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 465 (689)
Q Consensus 387 ~~LG~G~fG-~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~ 465 (689)
+.+|.|+.| .||+|. ..|+.||||.+-.+ ..+-..+|+..|+.-. .||||+++++.-.+.+++||..|.|
T Consensus 515 eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e--~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGV--YEGREVAVKRLLEE--FFDFAQREIQLLQESD-----EHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHcccCCCCcEEEEEe--eCCceehHHHHhhH--hHHHHHHHHHHHHhcc-----CCCceEEEEeeccCCceEEEEehHh
Confidence 358999998 568887 67899999988654 3456778999988775 5899999999999999999999999
Q ss_pred ccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---cCCCeEEEEecCCcccccC
Q 005590 466 RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS---YQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 466 ~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~---~~~~~vkL~DFGls~~~~~ 542 (689)
..+|.+++...... .........+.++.|++.||++||+.+||||||||.||||.. .....++|+|||+++....
T Consensus 586 ~~sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 586 ACSLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhhHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 99999999864111 000111456788999999999999999999999999999986 3456899999999987654
Q ss_pred C------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 005590 543 N------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG-EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 615 (689)
Q Consensus 543 ~------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG-~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~ 615 (689)
. .....||-+|+|||++....-..++|||||||++|+.++| .+||...-..+ +.|.
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl--------------- 726 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANIL--------------- 726 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhh---------------
Confidence 3 2335789999999999998888899999999999999995 99997642221 2221
Q ss_pred hhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 616 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
+.++.. . .++ ...+.++.+||.+||.++|..||+|.++|.||+|=
T Consensus 727 ------~~~~~L----------~-------~L~---~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 727 ------TGNYTL----------V-------HLE---PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ------cCccce----------e-------eec---cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 000000 0 000 01112678999999999999999999999999983
No 385
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=282.28 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=211.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++-..+..+.++||-|-||.||.+.++.-.-.||||.++.+......++.|..+|+.++ |||+|+++++|...-
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeik------HpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTHEP 336 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhc------CccHHHHhhhhccCC
Confidence 34445567778999999999999999988899999999999888899999999999996 679999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
.+|||+|||. |+|+++++.+.+.. ++.-.+..++.||..|+.||..+++|||||...|+||. ++..||++|||
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~e----v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg--EnhiVKvADFG 410 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSE----VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHIVKVADFG 410 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhh----cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc--ccceEEeeccc
Confidence 9999999997 89999998876654 77778889999999999999999999999999999998 58889999999
Q ss_pred CcccccCCccc-ccc---CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNLCL-YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~~~-~~g---t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
+++++.....+ ..| ..-|.|||.+....++.++|+|+|||+||||.| |-.||++-+...++..+.+..
T Consensus 411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy------- 483 (1157)
T KOG4278|consen 411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY------- 483 (1157)
T ss_pred hhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc-------
Confidence 99987655433 334 456999999999999999999999999999999 999999987777766553211
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
+...|+ -.++...+|++.||+|+|.+||+..|+-
T Consensus 484 ---------------------------RM~~Pe---------GCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 484 ---------------------------RMDGPE---------GCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ---------------------------cccCCC---------CCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 111111 1234467999999999999999998864
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.7e-30 Score=257.59 Aligned_cols=238 Identities=39% Similarity=0.609 Sum_probs=191.7
Q ss_pred CCCceEEEEECCCCcEEEEEEeecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEcccc-ch
Q 005590 393 AFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NL 469 (689)
Q Consensus 393 ~fG~Vyla~d~~tg~~vAvKii~~~~~~--~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g-~L 469 (689)
+||.||++++..+++.+|+|++...... ...+.+|++.++.+ .|++|+++++.+......++|+||+.+ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL------KHPNIVRLYDVFEDEDKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC------CCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence 5899999999888999999999764322 46777888888777 467999999999999999999999997 77
Q ss_pred HHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC--cccc
Q 005590 470 YEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN--LCLY 547 (689)
Q Consensus 470 ~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~--~~~~ 547 (689)
.+++..... ++...+..++.+++.+|.+||+.+++|+||+|+||+++. ++.++|+|||.+...... ....
T Consensus 75 ~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 75 FDLLKKRGR------LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE--DGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred HHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC--CCcEEEccccceeeeccccccccc
Confidence 777653321 788899999999999999999999999999999999985 688999999998776542 3445
Q ss_pred ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhcccc
Q 005590 548 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYD 626 (689)
Q Consensus 548 ~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~-~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~ 626 (689)
.++..|+|||.+.+..++.++|+||||+++++|++|..||.. .........+........
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------- 207 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP------------------- 207 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-------------------
Confidence 678899999999988899999999999999999999999977 333333332211100000
Q ss_pred chhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCC
Q 005590 627 LYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 685 (689)
Q Consensus 627 ~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf 685 (689)
+. ....+..+.+++.+||..+|++||++.++++||||
T Consensus 208 ---------------~~-------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 208 ---------------PP-------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---------------cc-------cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 00 00023568899999999999999999999999997
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.8e-30 Score=287.66 Aligned_cols=276 Identities=19% Similarity=0.275 Sum_probs=183.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC----------------CCCcEEEEEEeecchhh---------------hHhHHHHH
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDL----------------HTGVDVCLKIIKNDKDF---------------FDQSLDEI 428 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~----------------~tg~~vAvKii~~~~~~---------------~~~~~~Ei 428 (689)
.++|.+.++||+|+||+||+|.+. ..++.||||.+..+... .+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 468999999999999999999752 24567999998754211 12233456
Q ss_pred HHHHHhcccCCCCCCceeEEEEEEEe--------CCeEEEEEEcccc-chHHHHhhhhcc------------------CC
Q 005590 429 KLLKLVNKNDPADEHHILRLYDYFYH--------LEHLFIVCELLRA-NLYEFQKFNQES------------------GG 481 (689)
Q Consensus 429 ~iL~~l~~~~~~~h~~Iv~l~~~f~~--------~~~l~lVmEy~~g-~L~~l~~~~~~~------------------~~ 481 (689)
.++.++++.+ ..+.++++++++|.. .+..++||||+.+ +|.+++...... ..
T Consensus 224 ~~l~~l~~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIKRNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhhccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 6666665532 334566777777653 3568999999984 677766432100 01
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCc--cc--cccCccccChh
Q 005590 482 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL--CL--YVQSRSYRAPE 557 (689)
Q Consensus 482 ~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~--~~--~~gt~~Y~APE 557 (689)
...+.+..++.++.|++.||.|||+.+|+||||||+|||++. ++.+||+|||++....... .. ...++.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 112466778899999999999999999999999999999985 6789999999986543221 11 23478999999
Q ss_pred hhcCCC--------------------CC--chhhHHHHHHHHHHHHhCCC-CCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 005590 558 VIIGLP--------------------YD--QKIDLWSLGCILAELWTGEV-LFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 558 ~l~~~~--------------------~s--~~~DIwSLGvil~eLltG~~-PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
.+.... |+ ...|+||+|||+|+|++|.. ||.+...... ++. ... .....|
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~--~~~-~~~----~~~~~~ 453 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT--ELR-QYD----NDLNRW 453 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh--HHh-hcc----chHHHH
Confidence 986432 11 24699999999999999875 7753211110 000 000 000000
Q ss_pred hhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCC---CCCcCHHHHHcCCCCCCCC
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP---QRRPTAREALDHPWLQHPY 689 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP---~kRpTa~ElL~hpwf~~~~ 689 (689)
. . .....+.++. +...++..+|||.+||..+| .+|+|+.|+|+||||...|
T Consensus 454 r---~--------------~~~~~~~~~~-------~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~~ 507 (507)
T PLN03224 454 R---M--------------YKGQKYDFSL-------LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPEF 507 (507)
T ss_pred H---h--------------hcccCCCccc-------ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCCC
Confidence 0 0 0001111111 22345678999999999766 7899999999999998754
No 388
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.96 E-value=5.9e-30 Score=277.46 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=193.1
Q ss_pred EEEEEEeccCCCCceEEEEECC--CC--cEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLH--TG--VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~--tg--~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
....++||.|-||.||.|.... .| -.||||..+.+ .+..+.++.|.-+++.+ +||||+++++++.. .
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf------dHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF------DHPHIIKLIGVCVE-Q 463 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC------CCcchhheeeeeec-c
Confidence 3444579999999999997532 23 35899999874 34467788888888876 58899999999864 6
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
..+||||++. |.|..++..+... ++...+..+++||+.||.|||+.++|||||...|||+.+ ..-|||+|||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS--p~CVKLaDFG 536 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS--PQCVKLADFG 536 (974)
T ss_pred ceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC--cceeeecccc
Confidence 7899999998 7888888766654 888999999999999999999999999999999999996 4459999999
Q ss_pred CcccccCCcccc----ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 005590 536 SSCFQTDNLCLY----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 536 ls~~~~~~~~~~----~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
+++...+..... .-..-|||||.+.-..++.++|+|.|||.+||++. |..||.+-...+++..|..
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn--------- 607 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN--------- 607 (974)
T ss_pred hhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC---------
Confidence 999987764432 22456999999999999999999999999999988 9999988766665544421
Q ss_pred HhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
+-+...|. ..++.+..|+.+||.++|.+||+..|+.
T Consensus 608 -------------------------GeRlP~P~---------nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 608 -------------------------GERLPCPP---------NCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred -------------------------CCCCCCCC---------CCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 11122221 2235577999999999999999988864
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=273.44 Aligned_cols=253 Identities=20% Similarity=0.255 Sum_probs=200.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
.++..+.++||+|-||.|.+++- ..+.+||+|+++.+. .....+.+|+++|.+|+ ||||+++++++...+.
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk------hPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK------HPNIVELLGVCVQDDP 609 (807)
T ss_pred hhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC------CCCeeEEEeeeecCCc
Confidence 46788999999999999999984 446999999998753 34568889999998884 7899999999999999
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
+++|+||++ |+|.+++..+.... +.-....+|+.||+.||+||.+.++|||||.+.|+|++ ++.++||+|||+
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~--~e~~iKiadfgm 683 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD--GEFTIKIADFGM 683 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHHHHHHhhchhhccccccceeec--CcccEEecCccc
Confidence 999999999 67888877654322 33445667999999999999999999999999999999 589999999999
Q ss_pred cccccCCccc-----cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 537 SCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 537 s~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt--G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
++..-..... .+-...|||+|.+..++++.++|+|++|+++||+++ .+.||.....+++....-.++...+
T Consensus 684 sR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~-- 761 (807)
T KOG1094|consen 684 SRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG-- 761 (807)
T ss_pred ccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC--
Confidence 9854333222 344678999999999999999999999999999876 7899987776666655443322111
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
.+.-...|. ..+..+.+||.+||..+-++|||.+++-.
T Consensus 762 -------------------------~~~~l~~P~---------~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 762 -------------------------RQVVLSRPP---------ACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred -------------------------cceeccCCC---------cCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 011111111 22345679999999999999999999854
No 390
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=278.37 Aligned_cols=246 Identities=25% Similarity=0.373 Sum_probs=200.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC-C--cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHT-G--VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~t-g--~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
++.++.++||+|.||.|++|.+... | ..||||+++.+.. ..+.+++|+.+|..|+ |+|++++|++..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~------H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ------HPHLIRLYGVVLD- 182 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc------CcceeEEeeeecc-
Confidence 4567778999999999999988643 3 3589999987643 4678888998888775 7899999999887
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEec
Q 005590 456 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
..+.+|||++. |+|++-+... ....|....+..++.||+.||.||..+++|||||-..|||+-+ .-.|||+||
T Consensus 183 qp~mMV~ELaplGSLldrLrka----~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--prtVKI~DF 256 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKA----KKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--PRTVKICDF 256 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhc----cccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc--cceeeeecc
Confidence 77889999998 6788777652 2233888999999999999999999999999999999999986 667999999
Q ss_pred CCcccccCCcccccc------CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 005590 535 GSSCFQTDNLCLYVQ------SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 607 (689)
Q Consensus 535 Gls~~~~~~~~~~~g------t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~ 607 (689)
|+.+-++.....++- ...|.|||.+....++.++|+|++||+||||+| |+-||.+-....++.+|.+
T Consensus 257 GLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~------ 330 (1039)
T KOG0199|consen 257 GLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA------ 330 (1039)
T ss_pred cceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc------
Confidence 999877655443322 346999999999999999999999999999999 8999999988888877631
Q ss_pred HHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 608 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 608 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
...+|.. +..++.+.+++..||..+|.+|||...|.+.
T Consensus 331 ------------------------------~erLpRP-------k~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 331 ------------------------------GERLPRP-------KYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ------------------------------cccCCCC-------CCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 1112221 1234567899999999999999999888643
No 391
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=274.02 Aligned_cols=198 Identities=29% Similarity=0.524 Sum_probs=175.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHH---------HHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL---------DEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~---------~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
..|..++.||.|+||+|++|.++.+...|+||.+.+++-..+.+. .|+.||..++.+ .|+||++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF 637 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence 359999999999999999999999999999999988765544444 499999999865 59999999999
Q ss_pred EEeCCeEEEEEEcccc--chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeE
Q 005590 452 FYHLEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 452 f~~~~~l~lVmEy~~g--~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~v 529 (689)
|++.++.||+||-.+. +|.+++.+... +++.++..|++|++.|+++||+.||||||||-+||++++ +|-+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~--~g~~ 709 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS--NGFV 709 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhccccccccCceecccccccEEEec--CCeE
Confidence 9999999999999874 67887776543 899999999999999999999999999999999999995 8999
Q ss_pred EEEecCCccccc-CCccccccCccccChhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 005590 530 KIIDLGSSCFQT-DNLCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPN 589 (689)
Q Consensus 530 kL~DFGls~~~~-~~~~~~~gt~~Y~APE~l~~~~~-s~~~DIwSLGvil~eLltG~~PF~~ 589 (689)
||+|||.+.... .+.-.++||..|.|||++.|.+| +...|||+||++||.++....||.+
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999987654 45667899999999999999876 4678999999999999999999854
No 392
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-29 Score=278.05 Aligned_cols=247 Identities=21% Similarity=0.311 Sum_probs=202.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~---~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.....|.++||.|.||.|++++.+..|+ .||||.++..- .....++.|..|| .+.+||||++|.++...
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIM------GQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIM------GQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhc------ccCCCCcEEEEEEEEec
Confidence 4568899999999999999999877664 59999998642 3334555555555 45679999999999999
Q ss_pred CCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
.....||.|||+ |.|..+++.+.. .|+..++.-+++.|+.|++||-++++|||||...||||++ +...|++|
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DG-----qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsD 774 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDG-----QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSD 774 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCC-----ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEecc
Confidence 999999999999 567777765542 2888899999999999999999999999999999999996 88899999
Q ss_pred cCCcccccCCccc---ccc---CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 005590 534 LGSSCFQTDNLCL---YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 606 (689)
Q Consensus 534 FGls~~~~~~~~~---~~g---t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~ 606 (689)
||+++...+..-. ..| ..+|.|||.+...+++.++|+||+|++|||.++ |..||.+-+..+++..|....+
T Consensus 775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR-- 852 (996)
T KOG0196|consen 775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR-- 852 (996)
T ss_pred ccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC--
Confidence 9999987654321 122 467999999999999999999999999999887 9999999999999988864433
Q ss_pred cHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcC
Q 005590 607 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 682 (689)
Q Consensus 607 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~h 682 (689)
+|.... .+..+.+|+..||++|-.+||+..|++.+
T Consensus 853 ----------------------------------LPpPmD-------CP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 853 ----------------------------------LPPPMD-------CPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ----------------------------------CCCCCC-------CcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 222111 23457899999999999999999998753
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-29 Score=239.35 Aligned_cols=213 Identities=26% Similarity=0.394 Sum_probs=174.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
+....+..||+|++|.|-+.++..+|...|+|.++..-. ...+.++|+.+... ..++|+++++|+.+......
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r-----~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR-----TVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc-----CCCCCeEEEeehhhhccccE
Confidence 444555679999999999999999999999999876432 23344444444332 35789999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+|.||.|..+|..+.+.--..+. .+++..+-+|+..++.||.|||++ .++|||+||+||||+. .|+|||||||.+
T Consensus 121 wIcME~M~tSldkfy~~v~~~g~--~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGIs 196 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKGG--TIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGIS 196 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcCC--cCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc--CCcEEEcccccc
Confidence 99999999888777665443333 389999999999999999999976 8999999999999995 899999999999
Q ss_pred ccccCCccc--cccCccccChhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhh
Q 005590 538 CFQTDNLCL--YVQSRSYRAPEVIIG----LPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGM 602 (689)
Q Consensus 538 ~~~~~~~~~--~~gt~~Y~APE~l~~----~~~s~~~DIwSLGvil~eLltG~~PF~~-~~~~~~l~~i~~~ 602 (689)
..+.+.... -.|...|||||.+.. ..|+-++||||||+.++||.+++.||.. .++.+++.+++..
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 887765443 467788999999853 3699999999999999999999999976 5777777777643
No 394
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-28 Score=257.80 Aligned_cols=259 Identities=22% Similarity=0.315 Sum_probs=195.6
Q ss_pred CCCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCcee
Q 005590 367 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 446 (689)
Q Consensus 367 ~~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv 446 (689)
.+..+|+.....++.+.++.+.||+|.||.||+|.+ .|+.||||++.... ...+.+|.+|.+.+- +.|+||+
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd--E~SWfrEtEIYqTvm----LRHENIL 268 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD--ERSWFRETEIYQTVM----LRHENIL 268 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc--hhhhhhHHHHHHHHH----hccchhh
Confidence 346788888899999999999999999999999985 68999999997643 357788888887653 3588999
Q ss_pred EEEEEEEeC----CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC--------Cceecc
Q 005590 447 RLYDYFYHL----EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL--------GIIHCD 513 (689)
Q Consensus 447 ~l~~~f~~~----~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~--------gIvHrD 513 (689)
.+++.=... .+++||.+|.+ |+|+|++..+. ++.....+++..+++||++||.. .|.|||
T Consensus 269 gFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRD 341 (513)
T KOG2052|consen 269 GFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRD 341 (513)
T ss_pred hhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccc
Confidence 998875433 37999999998 79999987533 88899999999999999999942 499999
Q ss_pred CCCCcEEEeccCCCeEEEEecCCcccccC-------CccccccCccccChhhhcCCC------CCchhhHHHHHHHHHHH
Q 005590 514 LKPENILIKSYQRCEIKIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGLP------YDQKIDLWSLGCILAEL 580 (689)
Q Consensus 514 LKp~NILl~~~~~~~vkL~DFGls~~~~~-------~~~~~~gt~~Y~APE~l~~~~------~s~~~DIwSLGvil~eL 580 (689)
||..||||.+ ++...|+|+|+|-.... .....+||.+|||||++...- --..+||||||+++||+
T Consensus 342 lKSKNILVKk--n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEi 419 (513)
T KOG2052|consen 342 LKSKNILVKK--NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEI 419 (513)
T ss_pred cccccEEEcc--CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999995 88899999999865332 344579999999999986531 12468999999999999
Q ss_pred HhC----------CCCCCCC----hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccch
Q 005590 581 WTG----------EVLFPND----AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS 646 (689)
Q Consensus 581 ltG----------~~PF~~~----~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 646 (689)
+-. ++||.+- ...+.+.+++ =..+++..+|..+.
T Consensus 420 arRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVV--------------------------------Cv~~~RP~ipnrW~ 467 (513)
T KOG2052|consen 420 ARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVV--------------------------------CVQKLRPNIPNRWK 467 (513)
T ss_pred HHHhhcCCEehhhcCCcccCCCCCCCHHHHhcce--------------------------------eecccCCCCCcccc
Confidence 852 5666431 1111111111 01233444444332
Q ss_pred hhhhccCCcHHHHHHHHHhcccCCCCCcCHHH
Q 005590 647 LEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 678 (689)
Q Consensus 647 l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~E 678 (689)
....+ ..+..+|+.||..||.-|.||--
T Consensus 468 s~~~l----~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 468 SDPAL----RVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred cCHHH----HHHHHHHHHhhcCCchhhhHHHH
Confidence 22111 23668999999999999999754
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=261.56 Aligned_cols=261 Identities=21% Similarity=0.235 Sum_probs=188.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC----
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---- 456 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~---- 456 (689)
...+.+++||+|+||.||+|+ -+++.||||+++... ...+..|..|.... ...|+||++++..-....
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQE--KQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHHH--HHHHHhHHHHHhcc----CccchhHHHhhchhccCCcccc
Confidence 345677889999999999998 467999999998643 35677787777766 356999999999876555
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH---------CCceeccCCCCcEEEeccCC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS---------LGIIHCDLKPENILIKSYQR 526 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~---------~gIvHrDLKp~NILl~~~~~ 526 (689)
.++||++|.. |+|.++++.+- +++....+|+..|++||+|||+ ..|+|||||..||||.. +
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~--D 352 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN--D 352 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc--C
Confidence 7899999998 78999988654 8999999999999999999996 35999999999999995 8
Q ss_pred CeEEEEecCCcccccCC-----ccccccCccccChhhhcCCC-CC-----chhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 005590 527 CEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP-YD-----QKIDLWSLGCILAELWTGEVLFPNDAVVMI 595 (689)
Q Consensus 527 ~~vkL~DFGls~~~~~~-----~~~~~gt~~Y~APE~l~~~~-~s-----~~~DIwSLGvil~eLltG~~PF~~~~~~~~ 595 (689)
++..|+|||+|...... ....+||.+|||||++.+.- +. .+.||||+|.+||||++...-+....+.++
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 88999999999765432 22368999999999997642 22 368999999999999997554421211222
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC
Q 005590 596 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 675 (689)
Q Consensus 596 l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT 675 (689)
..-....+|.-|.-. +++..+- ..+.+..+|.. +... ..-..+.+.+..||+.||+-|+|
T Consensus 433 qlpfe~evG~hPt~e-----~mq~~VV-----------~kK~RP~~p~~---W~~h-~~~~~l~et~EeCWDhDaeARLT 492 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLE-----EMQELVV-----------RKKQRPKIPDA---WRKH-AGMAVLCETIEECWDHDAEARLT 492 (534)
T ss_pred cCchhHHhcCCCCHH-----HHHHHHH-----------hhccCCCChhh---hhcC-ccHHHHHHHHHHHcCCchhhhhh
Confidence 111222333322211 1111111 12223333332 2111 12245889999999999999999
Q ss_pred HHH
Q 005590 676 ARE 678 (689)
Q Consensus 676 a~E 678 (689)
|.=
T Consensus 493 A~C 495 (534)
T KOG3653|consen 493 AGC 495 (534)
T ss_pred hHH
Confidence 863
No 396
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=5.3e-28 Score=295.33 Aligned_cols=186 Identities=21% Similarity=0.291 Sum_probs=151.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
..+...+.||+|+||.||+|++..+++.||+|.+..... ....|+++++.+ +||||+++++++......++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l------~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL------QHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC------CCCCcceEEEEEEcCCCCEE
Confidence 456777889999999999999989999999999865332 223455666555 58999999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH---HCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 461 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH---SLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 461 VmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH---~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
||||+. |+|.+++.. +++..+..|+.||+.||+||| +.+|+||||||+||+++. ++..++. ||.
T Consensus 761 v~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--~~~~~~~-~~~ 828 (968)
T PLN00113 761 IHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--KDEPHLR-LSL 828 (968)
T ss_pred EEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC--CCceEEE-ecc
Confidence 999998 567776641 778889999999999999999 669999999999999985 4444443 554
Q ss_pred cccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP 588 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~ 588 (689)
+..... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 829 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 829 PGLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred cccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 433221 122367899999999999999999999999999999999999994
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8.2e-29 Score=246.90 Aligned_cols=259 Identities=20% Similarity=0.276 Sum_probs=195.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE-EEeCCe
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY-FYHLEH 457 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~-f~~~~~ 457 (689)
+.+.|.|.+.||.|.||++.+++++.+...+++|.++........+.+|..---.|. .|.||+.-|++ |+..+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls-----~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS-----PHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec-----cchhhhHHHHHHhhcCce
Confidence 457899999999999999999999999999999999877665666666654333332 47799987765 677889
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.+++|||+. |+|...+.-.+ +-+.....++.|+++||.|||++++||||||.+||||-..+...|||||||.
T Consensus 97 YvF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EEEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccc
Confidence 999999998 67766554322 7788899999999999999999999999999999999776777999999999
Q ss_pred cccccCCccccccCccccChhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 537 SCFQTDNLCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 537 s~~~~~~~~~~~gt~~Y~APE~l~~~-----~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
++..+........+..|.+||.+... .....+|+|.||+|+|.+|||.+||+.....+. +--.|
T Consensus 170 t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~-----------~Y~~~ 238 (378)
T KOG1345|consen 170 TRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK-----------PYWEW 238 (378)
T ss_pred ccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc-----------hHHHH
Confidence 98776655555567789999987533 255789999999999999999999974321110 00001
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCC---cCHHHHHcCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR---PTAREALDHPWL 685 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kR---pTa~ElL~hpwf 685 (689)
.+|+. .....+...+...++.+..+.++-|..+|++| .++.......|.
T Consensus 239 ~~w~~-------------------------rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 239 EQWLK-------------------------RKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred HHHhc-------------------------ccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 11110 01112334455566778899999999999999 666555544443
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=7.7e-27 Score=270.12 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=199.3
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEEC----C---CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005590 377 TVIAGRYYVTEYLGSAAFSKVFQAQDL----H---TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILR 447 (689)
Q Consensus 377 ~~l~~rY~i~~~LG~G~fG~Vyla~d~----~---tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~ 447 (689)
++-..+..+.+.||+|+||+|++|.-. . ....||||.++... .....+..|+++|+.+. .|+||+.
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-----~H~niv~ 366 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-----KHPNIVN 366 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----CCcchhh
Confidence 344455567779999999999999632 1 14579999987543 44678889999999986 4889999
Q ss_pred EEEEEEeCCeEEEEEEccc-cchHHHHhhhh---ccCCC-------cccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 448 LYDYFYHLEHLFIVCELLR-ANLYEFQKFNQ---ESGGE-------AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 448 l~~~f~~~~~l~lVmEy~~-g~L~~l~~~~~---~~~~~-------~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
+++++...+.+++|+||+. |+|+++++..+ ..... ..++...+..++.||+.|++||++.+++||||-.
T Consensus 367 llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAa 446 (609)
T KOG0200|consen 367 LLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAA 446 (609)
T ss_pred heeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhh
Confidence 9999999999999999998 78999988776 11111 2388999999999999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCcccc----cc--CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNLCLY----VQ--SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 589 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~~~~----~g--t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~ 589 (689)
.||||.. +..+||+|||+++......... .+ ...|||||.+....|+.++|+||+|++||||+| |..||++
T Consensus 447 RNVLi~~--~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 447 RNVLITK--NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhEEecC--CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999995 6789999999998654432221 11 345999999999999999999999999999999 8999987
Q ss_pred Ch-HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhccc
Q 005590 590 DA-VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 668 (689)
Q Consensus 590 ~~-~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~ 668 (689)
-. ..+++..+. . +.+...|. ....++.++++.||..
T Consensus 525 ~~~~~~l~~~l~------------~----------------------G~r~~~P~---------~c~~eiY~iM~~CW~~ 561 (609)
T KOG0200|consen 525 IPPTEELLEFLK------------E----------------------GNRMEQPE---------HCSDEIYDLMKSCWNA 561 (609)
T ss_pred CCcHHHHHHHHh------------c----------------------CCCCCCCC---------CCCHHHHHHHHHHhCC
Confidence 43 334333221 1 11111121 2246678999999999
Q ss_pred CCCCCcCHHHHHc
Q 005590 669 NPQRRPTAREALD 681 (689)
Q Consensus 669 dP~kRpTa~ElL~ 681 (689)
+|++||+..++.+
T Consensus 562 ~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 562 DPEDRPTFSECVE 574 (609)
T ss_pred CcccCCCHHHHHH
Confidence 9999999998764
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=6.8e-26 Score=221.97 Aligned_cols=208 Identities=42% Similarity=0.683 Sum_probs=178.5
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEccc
Q 005590 389 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 466 (689)
Q Consensus 389 LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~ 466 (689)
||.|.+|.||++.+..+++.+++|++..... ....+.+|+++++.+.+ ++|+++++++......+++||++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH------PNIVKLYGVFEDENHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC------CCeeeEeeeeecCCeEEEEEecCC
Confidence 6899999999999988899999999987643 24678888888888854 689999999999999999999999
Q ss_pred -cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCC--
Q 005590 467 -ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-- 543 (689)
Q Consensus 467 -g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~-- 543 (689)
++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++.. .+.++|+|||.+......
T Consensus 75 ~~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 75 GGSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCCcc
Confidence 57777765432 227889999999999999999999999999999999999841 578999999998766544
Q ss_pred -ccccccCccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 005590 544 -LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 621 (689)
Q Consensus 544 -~~~~~gt~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~ 621 (689)
.....+...|++||.+... .++.+.|+|++|+++++|
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------- 187 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------- 187 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------
Confidence 3345678889999999887 788999999999999999
Q ss_pred hccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCC
Q 005590 622 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 683 (689)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hp 683 (689)
..+.++|.+||+.||++||++.++++|+
T Consensus 188 ----------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1255899999999999999999999885
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-28 Score=268.45 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=202.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.++|..+..+|.|.||.||+|+|+.+++..|+|+++.+.. ...-+..|+.+++..+ |+||+.+++.|...+.+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~------h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR------HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC------CcChHHHHhhhhhhcCc
Confidence 3679999999999999999999999999999999997643 3455667777777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
+|+||||+| +|.+..... .++++.++..+.+..+++|.|||++|-+|||||-.|||++ +.|.+|+.|||.+
T Consensus 88 wicMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt--d~gDvklaDfgvs 159 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT--DEGDVKLADFGVS 159 (829)
T ss_pred EEEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec--ccCceeecccCch
Confidence 999999996 455443322 2389999999999999999999999999999999999999 4888999999998
Q ss_pred ccccCC---ccccccCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~Y~APE~l~---~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
..++.. ...+.||+.|||||+-. ...|....|+|++|+...|+-.-++|.-...+...+..|.+-.-.
T Consensus 160 aqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~q------ 233 (829)
T KOG0576|consen 160 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQ------ 233 (829)
T ss_pred hhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCC------
Confidence 776643 44589999999999963 456899999999999999998878775444443333333211110
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
.|. +... ..-.+.|.+|++.+|..+|++|||++.+|+|||.+.+
T Consensus 234 -----------------------------pp~---lkDk-~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 234 -----------------------------PPT---LKDK-TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred -----------------------------CCc---ccCC-ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 010 0000 0113558899999999999999999999999998753
No 401
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=7.9e-27 Score=259.91 Aligned_cols=242 Identities=23% Similarity=0.277 Sum_probs=190.4
Q ss_pred EEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~----~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+..++||+|+||+||+|.+...|+ +||||++..... ....+++|.-+|.. ++|||++++++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~mas------ldHpnl~RLLgvc~~s~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMAS------LDHPNLLRLLGVCMLST 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhc------CCCchHHHHhhhcccch
Confidence 3445689999999999999876665 578888875432 23455555555554 46899999999998766
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecC
Q 005590 457 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFG 535 (689)
+.||++|+. |.|+++++.++.. +-.+....|..||++||.|||.++++||||-..||||.+ ...+||+|||
T Consensus 772 -~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks--P~hvkitdfg 843 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS--PNHVKITDFG 843 (1177)
T ss_pred -HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC--CCeEEEEecc
Confidence 889999998 6899999886654 778889999999999999999999999999999999995 6789999999
Q ss_pred CcccccCCcccc-----ccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 005590 536 SSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 536 ls~~~~~~~~~~-----~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
+++........+ .-.+-|||-|.+....|+.++||||+||++||++| |..|+.+....++-..+.+
T Consensus 844 la~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~-------- 915 (1177)
T KOG1025|consen 844 LAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK-------- 915 (1177)
T ss_pred hhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc--------
Confidence 998765443221 22456999999999999999999999999999999 9999998877665544321
Q ss_pred HHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
..+..-|. ..+....-++.+||-.|+..||+++++..
T Consensus 916 --------------------------geRLsqPp---------iCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 --------------------------GERLSQPP---------ICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred --------------------------cccCCCCC---------CccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 11111111 12234567899999999999999999764
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=9e-27 Score=278.53 Aligned_cols=194 Identities=19% Similarity=0.219 Sum_probs=143.1
Q ss_pred ceeEEEEEE-------EeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 444 HILRLYDYF-------YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 444 ~Iv~l~~~f-------~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
||.+++++| .....++++||+++++|.+++.... ..+++..++.+++||+.||.|||++||+||||||
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP 108 (793)
T PLN00181 34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP 108 (793)
T ss_pred HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence 666677766 2334678899999999998886321 2389999999999999999999999999999999
Q ss_pred CcEEEec-----------------cCCCeEEEEecCCcccccC-------------------CccccccCccccChhhhc
Q 005590 517 ENILIKS-----------------YQRCEIKIIDLGSSCFQTD-------------------NLCLYVQSRSYRAPEVII 560 (689)
Q Consensus 517 ~NILl~~-----------------~~~~~vkL~DFGls~~~~~-------------------~~~~~~gt~~Y~APE~l~ 560 (689)
+||||+. +.++.+||+|||+++.... .....++|+.|+|||++.
T Consensus 109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 9999963 2355677888887753211 001245788999999999
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhcccccccc
Q 005590 561 GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYI 640 (689)
Q Consensus 561 ~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (689)
+..|+.++|||||||+||||++|.+|+.... ..+..+....
T Consensus 189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~------------------------------------- 229 (793)
T PLN00181 189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV------------------------------------- 229 (793)
T ss_pred cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-------------------------------------
Confidence 9999999999999999999999988864321 1111111000
Q ss_pred CCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCC
Q 005590 641 IPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 641 ~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~ 687 (689)
.|... . ...+...+++.+||+.||.+|||+.|+|+||||..
T Consensus 230 ~~~~~-~-----~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 230 LPPQI-L-----LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred cChhh-h-----hcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 00000 0 00123468899999999999999999999999975
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=6.8e-25 Score=219.51 Aligned_cols=205 Identities=37% Similarity=0.565 Sum_probs=171.8
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
|.+.+.||.|++|.||++.+..+++.+|+|.+..... ....+.+|+..++.+ .|+|++++++.+......++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL------KHPNIVKLYGVFEDPEPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC------CCCChhhheeeeecCCceEE
Confidence 5678899999999999999988899999999986543 356777788888777 36799999999998899999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 461 VmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
++||+.+ +|.+++...... +++..+..++.|++.+|.+||+.+++|+||+|.||+++. ++.++|+|||.+..
T Consensus 75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~--~~~~~l~d~g~~~~ 147 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM--DGLVKLADFGLARF 147 (225)
T ss_pred EEeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeeCceeeE
Confidence 9999997 777776543211 678899999999999999999999999999999999985 58899999999877
Q ss_pred ccCCc----cccccCccccChhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHH
Q 005590 540 QTDNL----CLYVQSRSYRAPEVI-IGLPYDQKIDLWSLGCILAELWTGEVLFPN--DAVVMILARII 600 (689)
Q Consensus 540 ~~~~~----~~~~gt~~Y~APE~l-~~~~~s~~~DIwSLGvil~eLltG~~PF~~--~~~~~~l~~i~ 600 (689)
..... ....++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .+...+...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 65432 445678889999999 667788899999999999999999999977 44445555554
No 404
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5.7e-25 Score=216.35 Aligned_cols=227 Identities=21% Similarity=0.342 Sum_probs=191.5
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++.++|+++++||+|+||.+|+|.....|+.||||+-..... ..++..|.++.+.|+.. ..|+.+..++....+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g-----~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGG-----VGIPHIRHYGTEKDY 85 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccC-----CCCchhhhhcccccc
Confidence 456899999999999999999999999999999999876533 46788899999999864 478888889999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC-CeEEEEecCC
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~-~~vkL~DFGl 536 (689)
-.+||+.++.+|.+++..+.+. ++.+.+..++-|++.-++|+|..++|||||||+|+|+.-+.. ..+.|||||+
T Consensus 86 nvlVMdLLGPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 86 NVLVMDLLGPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ceeeeeccCccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence 9999999999999999887765 999999999999999999999999999999999999864333 3689999999
Q ss_pred cccccCC----------ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHhhc
Q 005590 537 SCFQTDN----------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND---AVVMILARIIGML 603 (689)
Q Consensus 537 s~~~~~~----------~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~---~~~~~l~~i~~~~ 603 (689)
|+...+. .....||..|.+-..+.+...+.+.|+-|+|.+|..+.-|.+||++- +...-..+|.+..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK 240 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh
Confidence 9765443 22357899999999988888899999999999999999999999874 3334455666666
Q ss_pred CCCcHHHHhhhh
Q 005590 604 GPIDLEMLMQGQ 615 (689)
Q Consensus 604 g~~~~e~~~~~~ 615 (689)
-..+.+.+.++-
T Consensus 241 ~s~~ie~LC~G~ 252 (341)
T KOG1163|consen 241 MSTPIEVLCKGF 252 (341)
T ss_pred cCCCHHHHhCCC
Confidence 666666666543
No 405
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-24 Score=222.39 Aligned_cols=226 Identities=22% Similarity=0.318 Sum_probs=196.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 378 ~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++.-.|+|.++||+|+||.++.+++..+++.||||.-+.. ....++..|.+..+.|... ++|++.|.+.....+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQLrdEYr~YKlL~g~-----~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQLRDEYRTYKLLGGT-----EGIPQVYYFGQEGKY 98 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-CCcchHHHHHHHHHHHcCC-----CCCCceeeeccccch
Confidence 5567899999999999999999999999999999987653 3347888999999999754 689999998888899
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecc---CCCeEEEEec
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY---QRCEIKIIDL 534 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~---~~~~vkL~DF 534 (689)
-.+|||+++.+|.+++..+.+. |+.+.+..++.||+.-++|+|++.+|.|||||+|+||... ....|.|+||
T Consensus 99 NiLVidLLGPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 99 NILVIDLLGPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhhhCcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence 9999999999999999988765 9999999999999999999999999999999999999752 2346899999
Q ss_pred CCcccccCCcc----------ccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHh
Q 005590 535 GSSCFQTDNLC----------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN---DAVVMILARIIG 601 (689)
Q Consensus 535 Gls~~~~~~~~----------~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~---~~~~~~l~~i~~ 601 (689)
|+|+.+.++.+ ...||..||+-...++...|.+.|+-|||-+++.+|-|.+||++ .+..+-..+|-.
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence 99988765433 35789999999999999999999999999999999999999986 566677777777
Q ss_pred hcCCCcHHHHhhh
Q 005590 602 MLGPIDLEMLMQG 614 (689)
Q Consensus 602 ~~g~~~~e~~~~~ 614 (689)
.....|.+.+..+
T Consensus 254 ~Kr~T~i~~Lc~g 266 (449)
T KOG1165|consen 254 TKRSTPIEVLCEG 266 (449)
T ss_pred ccccCCHHHHHhc
Confidence 7777777776654
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=5.8e-23 Score=220.58 Aligned_cols=204 Identities=28% Similarity=0.343 Sum_probs=170.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCC-cEEEEEEeecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEE-EeCCeE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYF-YHLEHL 458 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg-~~vAvKii~~~~~~-~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f-~~~~~l 458 (689)
+|++.++||+|+||.||++.+..++ ..+|+|+....... ...+..|..++..+.. ...-.|+..+++.+ ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999987774 68999988764322 2267889999999985 12235899999999 477889
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccC-C--CeEEEEecC
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-R--CEIKIIDLG 535 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~-~--~~vkL~DFG 535 (689)
++||+.++.+|.++..... ...++...+..|+.|++.+|.+||+.|++||||||.|+++.... . ..+.|+|||
T Consensus 97 ~iVM~l~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEEeccCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 9999999999999876443 23399999999999999999999999999999999999998532 1 579999999
Q ss_pred Ccc--ccc-C---------C-ccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh
Q 005590 536 SSC--FQT-D---------N-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 591 (689)
Q Consensus 536 ls~--~~~-~---------~-~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~ 591 (689)
+++ ... . . ...+.||..|.++.+..+...+.+.|+||++.++.+++.|..||.+..
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 998 311 1 1 223569999999999999999999999999999999999999997654
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.91 E-value=7e-24 Score=220.51 Aligned_cols=252 Identities=19% Similarity=0.226 Sum_probs=191.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 379 l~~rY~i~~~LG~G~fG~Vyla~d~~t-----g~~vAvKii~~~~~--~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
-..|++..-++-+|.||.||.|++... .+.|.+|.++.... +...++.|..++.. ..|||++.+.++
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~------~sH~nll~V~~V 355 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYG------ASHPNLLSVLGV 355 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhc------CcCCCccceeEE
Confidence 356788888899999999999976543 23456676655432 23334444444433 358899999998
Q ss_pred EEeC-CeEEEEEEccc-cchHHHHhhhhccCCC--cccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCC
Q 005590 452 FYHL-EHLFIVCELLR-ANLYEFQKFNQESGGE--AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 527 (689)
Q Consensus 452 f~~~-~~l~lVmEy~~-g~L~~l~~~~~~~~~~--~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~ 527 (689)
.... ...++++++++ |+|..++..++..... ..++..++..++.|++.|+.|||+.|+||.||...|++|+ +..
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId--d~L 433 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID--DQL 433 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh--hhe
Confidence 8744 56788899998 7898888755533322 3466777888999999999999999999999999999999 478
Q ss_pred eEEEEecCCcccccCCcccccc-----CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHh
Q 005590 528 EIKIIDLGSSCFQTDNLCLYVQ-----SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 528 ~vkL~DFGls~~~~~~~~~~~g-----t~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~ 601 (689)
+|||+|=.+++..-+......| ...||+||.+.+..|+.++|+|||||+||||+| |+.||..-++.++...+..
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 9999999999865544443333 456999999999999999999999999999999 9999988887776655531
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHc
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 681 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~ 681 (689)
. +.+.+. ...+.++..++.-||...|++||+.+|+..
T Consensus 514 G------------------------------------yRlaQP-------~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 514 G------------------------------------YRLAQP-------FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred c------------------------------------ceecCC-------CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 1 111111 122355779999999999999999999864
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=3.8e-24 Score=208.08 Aligned_cols=168 Identities=28% Similarity=0.326 Sum_probs=123.5
Q ss_pred cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccccCCccc
Q 005590 467 ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 546 (689)
Q Consensus 467 g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~ 546 (689)
|+|.+++.... ..+++..++.|+.||+.||.|||+.+ ||+|||++. ++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeecccc--
Confidence 46777765432 23899999999999999999999999 999999984 778888 99987655432
Q ss_pred cccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccc
Q 005590 547 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEY 625 (689)
Q Consensus 547 ~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~-~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~ 625 (689)
..+|+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+..+.....+...
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------------- 126 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP----------------- 126 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc-----------------
Confidence 2689999999999999999999999999999999999999965432 1222222111000000
Q ss_pred cchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCC
Q 005590 626 DLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 686 (689)
Q Consensus 626 ~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~ 686 (689)
...+....... ...+.+||.+||..||.+|||+.|+++|+|+.
T Consensus 127 -------------~~~~~~~~~~~-----~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 127 -------------RDRSNLESVSA-----ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred -------------cccccHHHHHh-----hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 00000000000 02588999999999999999999999999864
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=7.1e-24 Score=243.24 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=189.3
Q ss_pred CcE-EEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY-~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~--~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
..| .-.+++|.|++|.|+.+......+.++.|.++.. ...... .....+..++-....+.|++++..+..+.....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~-~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESER-KYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHH-HHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence 334 3456789999999999988777776666655421 111111 111125555655667789999887777776665
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 458 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 458 l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
..-+||||.++|..++.... .++..++..++.|++.||+|||+.||.|||||++|+++.. .|.+||+|||.+
T Consensus 396 ~~~~mE~~~~Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAA 467 (601)
T ss_pred chhhhhcccHHHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcc
Confidence 55669999998887776542 2888899999999999999999999999999999999995 789999999987
Q ss_pred ccccC-------CccccccCccccChhhhcCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCChHHHHHH-HHHhhcCCCcH
Q 005590 538 CFQTD-------NLCLYVQSRSYRAPEVIIGLPYDQ-KIDLWSLGCILAELWTGEVLFPNDAVVMILA-RIIGMLGPIDL 608 (689)
Q Consensus 538 ~~~~~-------~~~~~~gt~~Y~APE~l~~~~~s~-~~DIwSLGvil~eLltG~~PF~~~~~~~~l~-~i~~~~g~~~~ 608 (689)
....- .....+|+..|+|||++.+..|+. .+||||.|++++.|.+|+.||......+... .+.
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------- 539 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------- 539 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc--------
Confidence 54321 123468899999999999999885 6899999999999999999996543222110 000
Q ss_pred HHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCCCCCC
Q 005590 609 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 609 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpwf~~~ 688 (689)
. ........ .............+.+|.+||++||.+|+|+++|++.+||+..
T Consensus 540 ---------------~----------~~~~~~~~---~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 540 ---------------Y----------SDQRNIFE---GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ---------------c----------cccccccc---ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 0 00000000 1111122234567899999999999999999999999999864
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.3e-20 Score=194.97 Aligned_cols=257 Identities=32% Similarity=0.489 Sum_probs=193.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
|.+.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|+.++..+.+. ++|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP-----PNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-----cceeeEEEEEecCCEE
Confidence 788999999999999999976 8889999876432 355677888888877643 2799999999877888
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCC-eEEEEecCC
Q 005590 459 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 536 (689)
Q Consensus 459 ~lVmEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~-~vkL~DFGl 536 (689)
+++++++.+. +.+++...... ..+.......++.|++.+|.|+|..+++||||||+||+++. .+ .++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~--~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC--CCCeEEEeccCc
Confidence 9999999964 54343322211 23889999999999999999999999999999999999995 44 799999999
Q ss_pred cccccCC---------ccccccCccccChhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHH
Q 005590 537 SCFQTDN---------LCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARII 600 (689)
Q Consensus 537 s~~~~~~---------~~~~~gt~~Y~APE~l~~---~~~s~~~DIwSLGvil~eLltG~~PF~~~~~----~~~l~~i~ 600 (689)
+...... .....++..|+|||.+.+ ..++...|+||+|++++++++|..||..... ......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 8754332 345688999999999988 5788999999999999999999999876653 22222222
Q ss_pred hhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 601 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 601 ~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
....+ ........... ......+.+++.+++..+|..|.+..+..
T Consensus 229 ~~~~~------------------------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 273 (384)
T COG0515 229 ELPTP------------------------------SLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDL 273 (384)
T ss_pred hcCCc------------------------------ccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHh
Confidence 11111 00000000000 11124577999999999999999999998
Q ss_pred cCCCCCC
Q 005590 681 DHPWLQH 687 (689)
Q Consensus 681 ~hpwf~~ 687 (689)
.++|...
T Consensus 274 ~~~~~~~ 280 (384)
T COG0515 274 SHDLLAH 280 (384)
T ss_pred hchHhhC
Confidence 8866543
No 411
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.86 E-value=1.2e-22 Score=184.14 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=83.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
+++.|+|+|++| ||+ + .|.+|||||++|+|+.++ +|+||+++|+|+||+|||+|.|. ++.+++ +++|.++||
T Consensus 12 ~~~~L~V~vikA~~L~-~--~g~sDPYVKv~L~~~~k~-~k~kT~v~rktlnPvfnE~f~F~--v~~~~l~~~tL~~~V~ 85 (118)
T cd08677 12 QKAELHVNILEAENIS-V--DAGCECYISGCVSVSEGQ-KEAQTALKKLALHTQWEEELVFP--LPEEESLDGTLTLTLR 85 (118)
T ss_pred cCCEEEEEEEEecCCC-C--CCCCCeEEEEEEcCCcCc-cEEEcceecCCCCCccccEEEEe--CCHHHhCCcEEEEEEE
Confidence 568999999999 998 4 477999999999998664 57799999999999999999999 888888 777999999
Q ss_pred cCCCCCCCccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADA 329 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~ 329 (689)
|+|++++|++||++..+..+.
T Consensus 86 d~Drfs~~d~IG~v~l~l~~~ 106 (118)
T cd08677 86 CCDRFSRHSTLGELRLKLADV 106 (118)
T ss_pred eCCCCCCCceEEEEEEccccc
Confidence 999999999999999987665
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=5.1e-21 Score=207.16 Aligned_cols=166 Identities=20% Similarity=0.179 Sum_probs=126.1
Q ss_pred ceeeCceecCcEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecc------hhhhHhHHHHHHHHHHhcccCCCCCCc
Q 005590 372 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHH 444 (689)
Q Consensus 372 pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~-tg~~vAvKii~~~------~~~~~~~~~Ei~iL~~l~~~~~~~h~~ 444 (689)
|-.....+.++|.+.+.||+|+||+||+|++.. +++.+|||++... ......+.+|+++|+.+++ ++
T Consensus 9 ~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h------~~ 82 (365)
T PRK09188 9 PGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG------IG 82 (365)
T ss_pred cccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC------CC
Confidence 334456778999999999999999999998876 6788899986532 2234567899999998864 56
Q ss_pred ee-EEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEe
Q 005590 445 IL-RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIK 522 (689)
Q Consensus 445 Iv-~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDL-Kp~NILl~ 522 (689)
++ ++++. +..++||||+.|..+.... . .. ...++.|++.||.|||+.||+|||| ||+|||++
T Consensus 83 iv~~l~~~----~~~~LVmE~~~G~~L~~~~---~------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~ 146 (365)
T PRK09188 83 VVPQLLAT----GKDGLVRGWTEGVPLHLAR---P------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG 146 (365)
T ss_pred CCcEEEEc----CCcEEEEEccCCCCHHHhC---c------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc
Confidence 66 45442 4689999999875443221 0 11 1467899999999999999999999 99999997
Q ss_pred ccCCCeEEEEecCCcccccCCc-----------cccccCccccChhhhcC
Q 005590 523 SYQRCEIKIIDLGSSCFQTDNL-----------CLYVQSRSYRAPEVIIG 561 (689)
Q Consensus 523 ~~~~~~vkL~DFGls~~~~~~~-----------~~~~gt~~Y~APE~l~~ 561 (689)
. ++.+||+|||+++...... +...+++.|+|||.+..
T Consensus 147 ~--~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 147 P--DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred C--CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 4 6789999999987544321 33567888999999853
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=3.6e-20 Score=193.06 Aligned_cols=206 Identities=22% Similarity=0.337 Sum_probs=131.5
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcc-cCC---CCCCceeEEEEEEEe
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNK-NDP---ADEHHILRLYDYFYH 454 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~~~~Ei~iL~~l~~-~~~---~~h~~Iv~l~~~f~~ 454 (689)
....+.||.|+++.||.+.|..||+.+|+|++..... ..+++.+|.-....+.. .++ ..|-.++..++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4566789999999999999999999999999864321 22333333322222111 000 001123333333221
Q ss_pred ---------C---C-----eEEEEEEccccchHHHHhhhhccCC-CcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 005590 455 ---------L---E-----HLFIVCELLRANLYEFQKFNQESGG-EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 516 (689)
Q Consensus 455 ---------~---~-----~l~lVmEy~~g~L~~l~~~~~~~~~-~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp 516 (689)
. . ..+++|+-+.++|.+++..-..... +..+.......+..|+++.+++||..|++|+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 1 1 3478999999998888664322211 22244445566779999999999999999999999
Q ss_pred CcEEEeccCCCeEEEEecCCcccccCCccccccCccccChhhhcC--------CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005590 517 ENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG--------LPYDQKIDLWSLGCILAELWTGEVLFP 588 (689)
Q Consensus 517 ~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~--------~~~s~~~DIwSLGvil~eLltG~~PF~ 588 (689)
+|++++. +|.++|+||+.....+........+..|.|||.... ..++.+.|.|+||+++|.|++|..||.
T Consensus 174 ~nfll~~--~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 174 ENFLLDQ--DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp GGEEE-T--TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred eeEEEcC--CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 9999995 899999999987665554333445678999998743 247889999999999999999999996
Q ss_pred CC
Q 005590 589 ND 590 (689)
Q Consensus 589 ~~ 590 (689)
..
T Consensus 252 ~~ 253 (288)
T PF14531_consen 252 LS 253 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=2.4e-21 Score=222.63 Aligned_cols=244 Identities=26% Similarity=0.396 Sum_probs=174.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 382 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 382 rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~--~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
.|...+.||++.|=+|.+|++ ..|. |+||++.+.. .....+.++++-++.. ...+||.+++.-+-......|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~----l~~~pn~lPfqk~~~t~kAAy 97 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIKFA----LMKAPNCLPFQKVLVTDKAAY 97 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHHHH----hhcCCcccchHHHHHhhHHHH
Confidence 678889999999999999996 4455 9999987643 1223333333333321 224789998877766777889
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+|-+|...+|+|.+..+. .+.+-+.+.|+.||+.||.-+|..||+|||||.+||||++ ..-+.|+||..-+.
T Consensus 98 lvRqyvkhnLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 98 LVRQYVKHNLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHhhhhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee--echhhhhcccccCC
Confidence 999999999998776443 3778889999999999999999999999999999999997 44578999986432
Q ss_pred ---ccCCc---cccccC----ccccChhhhcCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 005590 540 ---QTDNL---CLYVQS----RSYRAPEVIIGL----------P-YDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 597 (689)
Q Consensus 540 ---~~~~~---~~~~gt----~~Y~APE~l~~~----------~-~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~ 597 (689)
..+++ ..+..| ..|.|||.+... + ..++.||||+||+++||++ |++||.-.+...+-.
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~ 249 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRS 249 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhc
Confidence 12222 223444 359999998542 2 5678999999999999998 799995322111100
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHH
Q 005590 598 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 677 (689)
Q Consensus 598 ~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ 677 (689)
. +.... .++-..+ .+..++.||..|++.||++|.+|+
T Consensus 250 ~-----~~~~~--------------------------e~~Le~I------------ed~~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 250 G-----NADDP--------------------------EQLLEKI------------EDVSLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred c-----CccCH--------------------------HHHHHhC------------cCccHHHHHHHHHccCchhccCHH
Confidence 0 00000 0111111 134578999999999999999999
Q ss_pred HHHcC
Q 005590 678 EALDH 682 (689)
Q Consensus 678 ElL~h 682 (689)
+.|+-
T Consensus 287 dyL~~ 291 (1431)
T KOG1240|consen 287 DYLQK 291 (1431)
T ss_pred HHHHh
Confidence 99974
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.82 E-value=2.1e-21 Score=214.23 Aligned_cols=236 Identities=27% Similarity=0.346 Sum_probs=183.5
Q ss_pred EeccCCCCceEEEEE---CCCCcEEEEEEeecchhh---hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEE
Q 005590 388 YLGSAAFSKVFQAQD---LHTGVDVCLKIIKNDKDF---FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 461 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d---~~tg~~vAvKii~~~~~~---~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lV 461 (689)
.+|+|.||.|+++.. ...|..+|+|+.++.... ......|..++..++ .||+++++...|+....++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-----~~~f~v~lhyafqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-----NTPFLVKLHYAFQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-----CCCceeeeeeeeccccchhHh
Confidence 379999999998853 345677999988753211 113334555665554 368999999999999999999
Q ss_pred EEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCcccc
Q 005590 462 CELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 540 (689)
Q Consensus 462 mEy~~g~-L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 540 (689)
++++.|+ +..-.. ....+.+...+.+...++-|+.++|+.+|+|||+|++||+++. +|++++.|||+++..
T Consensus 76 ld~~rgg~lft~l~------~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~--~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLS------KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL--EGHIKLTDFGLSKEA 147 (612)
T ss_pred hhhcccchhhhccc------cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--cCccccCCchhhhHh
Confidence 9999874 433222 2223778888899999999999999999999999999999994 899999999999875
Q ss_pred cCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 005590 541 TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 620 (689)
Q Consensus 541 ~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~ 620 (689)
-+.... |||..|||||++. ....++|+||+|+++|+|++|..||.. +...+|.+.--+.|.
T Consensus 148 v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~------------ 208 (612)
T KOG0603|consen 148 VKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR------------ 208 (612)
T ss_pred Hhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch------------
Confidence 443333 9999999999998 567899999999999999999999987 444444432222222
Q ss_pred hhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCH-----HHHHcCCCCCC
Q 005590 621 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 687 (689)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~ElL~hpwf~~ 687 (689)
....++++++..|+..+|.+|.-+ .|+.+|++|+.
T Consensus 209 --------------------------------~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 209 --------------------------------ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred --------------------------------hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence 223557799999999999999875 78999999985
No 416
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.82 E-value=3.4e-21 Score=178.64 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=95.1
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCC-CcccccccccccccccCccccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGS-SIDWIEGFKGSSDLHFKGAEKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tl-nP~~ne~f~~~~~~~~~~~~~~L~~~V~ 308 (689)
++++|+|+|++| ||++|+..+..|||||+.|++++++.+|+||+++|+|+ ||+|||+|.|+ ++.+..+.+|.++||
T Consensus 12 ~~~rLtV~VikarnL~~~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fd--v~~~~~~v~l~v~v~ 89 (135)
T cd08692 12 VNSRIQLQILEAQNLPSSSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFP--VTQQEHGIQFLIKLY 89 (135)
T ss_pred cCCeEEEEEEEccCCCcccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEe--CCchhheeEEEEEEE
Confidence 678899999999 99999777788999999999999999999999999996 58999999999 777666767999999
Q ss_pred cCCCCCCCcccccccccccccccccCCCccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEHGVATPDL 339 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e~~~~~~~ 339 (689)
|+|++++|++||.+.++..+..+++...|.+
T Consensus 90 d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~ 120 (135)
T cd08692 90 SRSSVRRKHFLGQVWISSDSSSSEAVEQWKD 120 (135)
T ss_pred eCCCCcCCceEEEEEECCccCCchhhhhHHH
Confidence 9999999999999999987666666666554
No 417
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.82 E-value=3.3e-21 Score=180.89 Aligned_cols=104 Identities=13% Similarity=-0.022 Sum_probs=91.6
Q ss_pred cccceEEEEecc-CCcccCCC--CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHN--VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPA 306 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~--g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~ 306 (689)
.+++|+|+|++| ||.+||.+ +.+|||||++|+|+.++.+|+||+++++++||+|||+|.|+ ++.+.+ +.+|.++
T Consensus 13 ~~~~L~V~V~karnL~~~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~--v~~~~L~~~~L~~~ 90 (138)
T cd08407 13 AANRLLVVVIKAKNLHSDQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFE--LPSELLAASSVELE 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEE--CCHHHhCccEEEEE
Confidence 567899999999 99999954 55899999999999988899999999999999999999999 888888 6669999
Q ss_pred cccCCCCCCCcccccccccccccccccCCCc
Q 005590 307 EIDNSDTRDGEVNGALHEGKADAEEHGVATP 337 (689)
Q Consensus 307 V~D~d~~~~~d~~G~v~~~~~~~~~e~~~~~ 337 (689)
|||+|++++++++|++.++... .++....|
T Consensus 91 V~d~d~~~~~d~iG~v~lg~~~-~g~~~~hW 120 (138)
T cd08407 91 VLNQDSPGQSLPLGRCSLGLHT-SGTERQHW 120 (138)
T ss_pred EEeCCCCcCcceeceEEecCcC-CCcHHHHH
Confidence 9999999999999999998754 44444443
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.82 E-value=2.7e-20 Score=214.06 Aligned_cols=218 Identities=29% Similarity=0.391 Sum_probs=160.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEE
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 459 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~ 459 (689)
..+|..+++|..|+||.||+++|+.+.+.+|+|+-++.- |++ ||+.+- +..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----------ilR-----------nilt~a------~npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----------ILR-----------NILTFA------GNPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-----------hhh-----------cccccc------CCcc
Confidence 468999999999999999999999999999996543321 111 111111 1112
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 460 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 460 lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
.| |+-..+++.... ++. +++.+++|||+.||+|||+||+|.+|+. -|++|++|||+++.
T Consensus 134 vv-----gDc~tllk~~g~------lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 134 VV-----GDCATLLKNIGP------LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKK 192 (1205)
T ss_pred ee-----chhhhhcccCCC------Ccc--------hhhHHhHhhccCCeecCCCCCCcceeee--cccccccchhhhhh
Confidence 22 433333332211 222 2266999999999999999999999995 89999999998754
Q ss_pred ccC------------------CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 005590 540 QTD------------------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 540 ~~~------------------~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~ 601 (689)
... .....+|||.|+|||++..+.|+..+|+|++|+|+|+.+-|..||.++.+++++...+.
T Consensus 193 GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis 272 (1205)
T KOG0606|consen 193 GLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS 272 (1205)
T ss_pred hhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh
Confidence 211 12235899999999999999999999999999999999999999999999999888763
Q ss_pred hcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcC---HHH
Q 005590 602 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---ARE 678 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpT---a~E 678 (689)
.....|+++ ....++++++|..+|+.+|..|.- +-+
T Consensus 273 d~i~wpE~d-----------------------------------------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 273 DDIEWPEED-----------------------------------------EALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred hhccccccC-----------------------------------------cCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 322211110 112356889999999999999964 566
Q ss_pred HHcCCCCCC
Q 005590 679 ALDHPWLQH 687 (689)
Q Consensus 679 lL~hpwf~~ 687 (689)
+-+|+||+.
T Consensus 312 vk~h~ff~~ 320 (1205)
T KOG0606|consen 312 VKQHGFFQL 320 (1205)
T ss_pred hhhccceee
Confidence 779999974
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=4.7e-20 Score=186.82 Aligned_cols=177 Identities=15% Similarity=0.203 Sum_probs=131.3
Q ss_pred cceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHh------HHHHHHHHHHhcccCCC
Q 005590 371 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQ------SLDEIKLLKLVNKNDPA 440 (689)
Q Consensus 371 ~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~----~~~~------~~~Ei~iL~~l~~~~~~ 440 (689)
+....+.++.++|+++++||.|+||.||++.+ ++..+|||++..... .... +.+|++.+.++.
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~----- 93 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR----- 93 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-----
Confidence 45566788899999999999999999999764 477899999974321 1112 467777888886
Q ss_pred CCCceeEEEEEEEeC--------CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCcee
Q 005590 441 DEHHILRLYDYFYHL--------EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIH 511 (689)
Q Consensus 441 ~h~~Iv~l~~~f~~~--------~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvH 511 (689)
|++|..+.+++... ...++||||++| +|.+... +++ ....+++.+|..||..|++|
T Consensus 94 -~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~gi~H 158 (232)
T PRK10359 94 -SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQHGMVS 158 (232)
T ss_pred -HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHcCCcc
Confidence 45788777776643 358999999998 4544321 222 24569999999999999999
Q ss_pred ccCCCCcEEEeccCCCeEEEEecCCcccccCCccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHH
Q 005590 512 CDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 581 (689)
Q Consensus 512 rDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLl 581 (689)
|||||+||+++. ++ ++|+|||........... ...++...|..++|+|+||+++..+.
T Consensus 159 ~Dikp~Nili~~--~g-i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 159 GDPHKGNFIVSK--NG-LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCChHHEEEeC--CC-EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999999985 55 999999987554322111 11444556778999999999987654
No 420
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.81 E-value=1.9e-20 Score=172.80 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=90.5
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCc-ceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE-KSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~-~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..++|+|+|++| ||+++|.+|.+|||||++|+|+.++. +++||+++++++||+|||+|.|. ++.+++ +++|.++|
T Consensus 12 ~~~~L~V~V~~arnL~~~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~--v~~~~L~~~~L~~~V 89 (124)
T cd08680 12 GDSSLVISVEQLRNLSALSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVP--ISSTKLYQKTLQVDV 89 (124)
T ss_pred CCCEEEEEEeEecCCcccccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEE--CCHHHhhcCEEEEEE
Confidence 457899999999 99999999999999999999999874 68899999999999999999999 888888 67799999
Q ss_pred ccCCCCCCCccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
||++++++++++|+++++..+.+-
T Consensus 90 ~~~~~~~~~~~lG~~~i~L~~~~~ 113 (124)
T cd08680 90 CSVGPDQQEECLGGAQISLADFES 113 (124)
T ss_pred EeCCCCCceeEEEEEEEEhhhccC
Confidence 999999999999999998776644
No 421
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.80 E-value=1.8e-20 Score=175.80 Aligned_cols=103 Identities=12% Similarity=0.020 Sum_probs=91.7
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..++|+|.|++| ||+++|.+|.+|||||++|+|++++.+|+||+++|+|+||+|||+|.|. ++.+.+ +.+|.++||
T Consensus 13 ~~~~L~V~Vi~A~nL~~~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~--v~~~~l~~~~l~~~V~ 90 (136)
T cd08406 13 TAERLTVVVVKARNLVWDNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFS--VPAIVLQDLSLRVTVA 90 (136)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEE--CCHHHhCCcEEEEEEE
Confidence 457899999999 9999999999999999999999988888999999999999999999999 888777 666999999
Q ss_pred cCCCCCCCcccccccccccccccccCCC
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEHGVAT 336 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e~~~~ 336 (689)
|+|++++++++|.+.++... .+++...
T Consensus 91 ~~d~~~~~~~iG~v~lg~~~-~g~~~~h 117 (136)
T cd08406 91 ESTEDGKTPNVGHVIIGPAA-SGMGLSH 117 (136)
T ss_pred eCCCCCCCCeeEEEEECCCC-CChhHHH
Confidence 99999999999999997653 3444443
No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=4.5e-19 Score=176.13 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=102.8
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 438 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~---------------------------~~~~~~Ei~iL~~l~~~~ 438 (689)
...||+|+||.||+|.+. +|+.||||+++.+... ......|.+++..+....
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999986 8999999999764210 012234888899887542
Q ss_pred CCCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCC
Q 005590 439 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL-HSLGIIHCDLKPE 517 (689)
Q Consensus 439 ~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yL-H~~gIvHrDLKp~ 517 (689)
. .+|+++. ... .+|||||++|+.+....... ..+++..+..++.|++.+|.+| |+.||+||||||+
T Consensus 81 v-~~p~~~~------~~~-~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~ 147 (190)
T cd05147 81 I-PCPEPIL------LKS-HVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCRLVHADLSEY 147 (190)
T ss_pred C-CCCcEEE------ecC-CEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 1 2333321 122 37999999975432221111 2388899999999999999999 7999999999999
Q ss_pred cEEEeccCCCeEEEEecCCccccc
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQT 541 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~ 541 (689)
|||++ ++.++|+|||++....
T Consensus 148 NIli~---~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 148 NLLYH---DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HEEEE---CCcEEEEEccccccCC
Confidence 99998 4679999999986543
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=5.5e-19 Score=207.29 Aligned_cols=203 Identities=20% Similarity=0.291 Sum_probs=162.2
Q ss_pred cceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005590 371 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 450 (689)
Q Consensus 371 ~pi~~~~~l~~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~ 450 (689)
.|.....+-+..|.|.+.||+|+||+||+|.+.. |+.||||+-+....|. +.-..+++.+|+.. --+-|..+..
T Consensus 688 ~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~---~~~~~~~~~~ 761 (974)
T KOG1166|consen 688 NPNTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLKPQ---MLPSIMHISS 761 (974)
T ss_pred CccceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhchh---hhcchHHHHH
Confidence 3444556667889999999999999999999766 9999999988765442 22233444455411 1235777777
Q ss_pred EEEeCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-----c
Q 005590 451 YFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-----Y 524 (689)
Q Consensus 451 ~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~-----~ 524 (689)
.+...+.-++|+||.. |+|++++. ..+.+.+..+..++.||+..+..||..+|||+||||+|+||.. .
T Consensus 762 a~~~~~~S~lv~ey~~~Gtlld~~N------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 762 AHVFQNASVLVSEYSPYGTLLDLIN------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred HHccCCcceeeeeccccccHHHhhc------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCC
Confidence 7777888899999999 78999887 3344889999999999999999999999999999999999963 2
Q ss_pred CCCeEEEEecCCccccc---C--CccccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Q 005590 525 QRCEIKIIDLGSSCFQT---D--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 585 (689)
Q Consensus 525 ~~~~vkL~DFGls~~~~---~--~~~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLltG~~ 585 (689)
+...++|||||.+..+. + .....++|-.+-.+|+..|.+|+..+|.|.|+.+++-||.|+.
T Consensus 836 ~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 24469999999886432 2 2344688999999999999999999999999999999999863
No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=5.4e-18 Score=168.29 Aligned_cols=140 Identities=18% Similarity=0.211 Sum_probs=102.7
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 438 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~---------------------------~~~~~~Ei~iL~~l~~~~ 438 (689)
.+.||+|++|+||+|.+. +|+.||||+++..... .....+|.+.+..+.+.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA- 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 567999999999999987 8999999998864210 11224677778777654
Q ss_pred CCCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCC
Q 005590 439 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPE 517 (689)
Q Consensus 439 ~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~ 517 (689)
++.....+... ..++||||++|.......... ..++...+..++.|++.+|.+||+ .||+||||||+
T Consensus 80 -----~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~ 147 (190)
T cd05145 80 -----GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEY 147 (190)
T ss_pred -----CCCCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChh
Confidence 33222222222 248999999975222111111 126788899999999999999999 99999999999
Q ss_pred cEEEeccCCCeEEEEecCCcccccC
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|||++ ++.++|+|||++.....
T Consensus 148 NIll~---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE---CCCEEEEEcccceecCC
Confidence 99998 57899999999876543
No 425
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.76 E-value=3.4e-19 Score=168.50 Aligned_cols=95 Identities=9% Similarity=-0.037 Sum_probs=85.8
Q ss_pred ccceEEEEecc-CCcccC-CCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccc-
Q 005590 232 NDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI- 308 (689)
Q Consensus 232 ~~~l~v~i~e~-~L~~~d-~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~- 308 (689)
.+.|+|.|++| ||.++| .+|.+|||||++|+|++++..|+||+++|+|+||+|||+|.|. +. ..+++|.++||
T Consensus 28 ~~~L~V~Vi~ArnL~~~~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~--v~--l~~~~L~v~V~~ 103 (146)
T cd04028 28 KGQLEVEVIRARGLVQKPGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFD--VS--PTGKTLQVIVWG 103 (146)
T ss_pred CCEEEEEEEEeeCCCcccCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEE--Ec--CCCCEEEEEEEe
Confidence 46899999999 999985 6789999999999999998889999999999999999999999 65 34777999999
Q ss_pred cCCCCCCCcccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~ 330 (689)
|++++++++++|++.+.....+
T Consensus 104 d~~~~~~~~~iG~~~i~L~~l~ 125 (146)
T cd04028 104 DYGRMDKKVFMGVAQILLDDLD 125 (146)
T ss_pred CCCCCCCCceEEEEEEEccccc
Confidence 7999999999999999887764
No 426
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.76 E-value=3.3e-19 Score=165.68 Aligned_cols=100 Identities=11% Similarity=-0.011 Sum_probs=90.9
Q ss_pred cccceEEEEecc-CCcccCCC-CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~-g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..+.|+|.|++| ||+++|.+ |.+|||||++|+|+.++..|+||+++++++||+|||+|.|. ++.+.+ +++|.+.|
T Consensus 13 ~~~~L~V~V~~a~nL~~~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~--v~~~~l~~~~L~v~V 90 (128)
T cd08392 13 RTSCLEITIKACRNLAYGDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYV--VEADLLSSRQLQVSV 90 (128)
T ss_pred CCCEEEEEEEecCCCCccCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEE--cCHHHhCCcEEEEEE
Confidence 567999999999 99999986 99999999999999988889999999999999999999999 887777 56799999
Q ss_pred ccCCCCCCCcccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
||++++++++++|++.+...+.+-.
T Consensus 91 ~~~~~~~~~~~lG~~~i~L~~~~~~ 115 (128)
T cd08392 91 WHSRTLKRRVFLGEVLIPLADWDFE 115 (128)
T ss_pred EeCCCCcCcceEEEEEEEcCCcccC
Confidence 9999999999999999988766443
No 427
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=1.6e-17 Score=165.38 Aligned_cols=182 Identities=17% Similarity=0.118 Sum_probs=136.9
Q ss_pred EEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhH-----hHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 384 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 384 ~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~-----~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.+...|++|+||+|+++.. .+.+++.+.+.....+.. .+.+|+++|+.+.+ +++|++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-----~~~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-----LPRTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-----CCCCCEEEEE----cCE
Confidence 3567899999999998873 788888887776654433 57789999999965 3578888775 446
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDL-Kp~NILl~~~~~~~vkL~DFGls 537 (689)
+++|||+.|..+... .... ...++.|++.+|.++|+.||+|||| ||+|||++. ++.++|+|||++
T Consensus 74 ~lvmeyI~G~~L~~~-----------~~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~--~g~i~LIDFG~A 139 (218)
T PRK12274 74 HLDRSYLAGAAMYQR-----------PPRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE--DGSPAVIDFQLA 139 (218)
T ss_pred EEEEeeecCccHHhh-----------hhhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC--CCCEEEEECCCc
Confidence 999999998643211 0011 1347889999999999999999999 799999984 678999999999
Q ss_pred ccccCCcc----------------ccccCccccChhhhcCC-CCC-chhhHHHHHHHHHHHHhCCCCCCCC
Q 005590 538 CFQTDNLC----------------LYVQSRSYRAPEVIIGL-PYD-QKIDLWSLGCILAELWTGEVLFPND 590 (689)
Q Consensus 538 ~~~~~~~~----------------~~~gt~~Y~APE~l~~~-~~s-~~~DIwSLGvil~eLltG~~PF~~~ 590 (689)
........ ....++.|+.|+...-. ..+ ...++++.|+.+|.++|+..|+-++
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 75443221 02347788888875432 344 5778999999999999999887543
No 428
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.5e-18 Score=178.79 Aligned_cols=191 Identities=24% Similarity=0.326 Sum_probs=137.1
Q ss_pred CCCCceeEEEEEEEe---------------------------CCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHH
Q 005590 440 ADEHHILRLYDYFYH---------------------------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 492 (689)
Q Consensus 440 ~~h~~Iv~l~~~f~~---------------------------~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~ 492 (689)
..||||+++...|.+ ...+|+||.....+|..++.... .+....+.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC-------CchHHHHH
Confidence 479999999988853 23589999999999999887554 56677888
Q ss_pred HHHHHHHHHHHHHHCCceeccCCCCcEEEecc--CCCeEEEEecCCccccc---------CCccccccCccccChhhhcC
Q 005590 493 ITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIKIIDLGSSCFQT---------DNLCLYVQSRSYRAPEVIIG 561 (689)
Q Consensus 493 i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~--~~~~vkL~DFGls~~~~---------~~~~~~~gt~~Y~APE~l~~ 561 (689)
|+.|+++|+.|||++||.|||+|.+||||.-+ +-..++|+|||.+.--. ......-|.-.-||||+...
T Consensus 346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 99999999999999999999999999998543 34578999999652111 11112345566899999864
Q ss_pred CC------CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccc
Q 005590 562 LP------YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETN 635 (689)
Q Consensus 562 ~~------~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (689)
.+ --.++|.|+.|.+.||+++...||....... -....
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-----------------L~~r~------------------- 469 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-----------------LDTRT------------------- 469 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-----------------echhh-------------------
Confidence 32 2248999999999999999999996521100 00000
Q ss_pred cccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHH
Q 005590 636 QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 679 (689)
Q Consensus 636 ~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~El 679 (689)
-.+.++|. ......+.+++||..+|+.||++|+++.=+
T Consensus 470 Yqe~qLPa------lp~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 470 YQESQLPA------LPSRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred hhhhhCCC------CcccCChHHHHHHHHHhcCCccccCCccHH
Confidence 00111221 112234668899999999999999997644
No 429
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.75 E-value=5.8e-19 Score=162.72 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=88.1
Q ss_pred ccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCccccccccccccc-ccCcc-ccccccccc
Q 005590 232 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDL-HFKGA-EKDLMPAEI 308 (689)
Q Consensus 232 ~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~-~~~~~-~~~L~~~V~ 308 (689)
.+.|+|.|++| ||+++| +|.+|||||++|+|+.++..++||+++++++||+|||+|.|. + +.+.+ +.+|.++||
T Consensus 12 ~~~L~V~Vi~A~~L~~~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~--~~~~~~l~~~~L~~~V~ 88 (122)
T cd08381 12 NGTLFVMVMHAKNLPLLD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYD--GLPVEDLQQRVLQVSVW 88 (122)
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEe--cCChHHhCCCEEEEEEE
Confidence 57899999999 999999 999999999999999988889999999999999999999998 5 55555 567999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|+|++++++++|++.+...+...
T Consensus 89 d~d~~~~~~~lG~~~i~l~~l~~ 111 (122)
T cd08381 89 SHDSLVENEFLGGVCIPLKKLDL 111 (122)
T ss_pred eCCCCcCCcEEEEEEEecccccc
Confidence 99999999999999998877664
No 430
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.74 E-value=9e-19 Score=160.71 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=88.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcccccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 309 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D 309 (689)
.+++|+|.|++| ||.+|| +|.+|||||++|+|+.++..++||+++++|+||+|||+|.|. ++.+..++.|.++|||
T Consensus 10 ~~~~L~V~Vi~ar~L~~~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~--v~~~~~~~~l~v~V~~ 86 (119)
T cd08685 10 QNRKLTLHVLEAKGLRSTN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFD--VNERDYQKRLLVTVWN 86 (119)
T ss_pred cCCEEEEEEEEEECCCCCC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEE--cChHHhCCEEEEEEEC
Confidence 457899999999 999999 889999999999999988889999999999999999999998 7777676679999999
Q ss_pred CCCCCC-Cccccccccccccccc
Q 005590 310 NSDTRD-GEVNGALHEGKADAEE 331 (689)
Q Consensus 310 ~d~~~~-~d~~G~v~~~~~~~~~ 331 (689)
++...+ ++++|+++++..+...
T Consensus 87 ~~~~~~~~~~lG~~~i~l~~~~~ 109 (119)
T cd08685 87 KLSKSRDSGLLGCMSFGVKSIVN 109 (119)
T ss_pred CCCCcCCCEEEEEEEecHHHhcc
Confidence 999874 7999999999877753
No 431
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.74 E-value=1.1e-18 Score=161.71 Aligned_cols=100 Identities=10% Similarity=-0.006 Sum_probs=89.9
Q ss_pred cccceEEEEecc-CCcccCCC-CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~-g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..+.|+|.|++| ||+++|.+ |.+|||||++|+|+.++..++||+++++|+||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~--v~~~~l~~~~L~~~V 90 (125)
T cd08393 13 KLRELHVHVIQCQDLAAADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYK--VEREELPTRVLNLSV 90 (125)
T ss_pred CCCEEEEEEEEeCCCCCcCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEE--CCHHHhCCCEEEEEE
Confidence 456899999999 99999986 89999999999999988778899999999999999999999 887766 56799999
Q ss_pred ccCCCCCCCcccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
||+|++++++++|++.+...+.+-.
T Consensus 91 ~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 91 WHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EeCCCCCCCcEeEEEEEecCccccC
Confidence 9999999999999999987766443
No 432
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.73 E-value=9.6e-19 Score=164.69 Aligned_cols=98 Identities=15% Similarity=0.098 Sum_probs=87.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCC-cceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGT-EKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~-~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..++|+|+|++| ||+++|.+|..|||||++|+|+.++ ..|+||+++++++||+|||+|.|. ++.+++ +++|.++|
T Consensus 13 ~~~~L~V~VikarnL~~~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~--i~~~~l~~~~L~~~V 90 (138)
T cd08408 13 LTGRLSVEVIKGSNFKNLAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQ--VALFQLSEVTLMFSV 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEE--CCHHHhCccEEEEEE
Confidence 568999999999 9999999999999999999997654 467899999999999999999999 888777 67799999
Q ss_pred ccCCCCCCCcccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~ 330 (689)
||++++++++++|.+.++.....
T Consensus 91 ~~~~~~~~~~~iG~v~l~~~~~~ 113 (138)
T cd08408 91 YNKRKMKRKEMIGWFSLGLNSSG 113 (138)
T ss_pred EECCCCCCCcEEEEEEECCcCCC
Confidence 99999999999999988765433
No 433
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=6.6e-17 Score=162.79 Aligned_cols=139 Identities=21% Similarity=0.261 Sum_probs=106.9
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCC---eEE-E
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---HLF-I 460 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~-~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~---~l~-l 460 (689)
.+.||+|+||.||. +..++.. +||++... ....+...+|+++++.+.+. ..+||||+++++++.+.. ..+ +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~-~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRR-LIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhcc-CCCCcccceeeEEEEeCCCCeEEEEE
Confidence 35799999999995 6667666 79988754 22446789999999999763 467999999999999873 434 7
Q ss_pred EEEccc---cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHH-HHHHHCCceeccCCCCcEEEecc--CCCeEEEEec
Q 005590 461 VCELLR---ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL-EYLHSLGIIHCDLKPENILIKSY--QRCEIKIIDL 534 (689)
Q Consensus 461 VmEy~~---g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL-~yLH~~gIvHrDLKp~NILl~~~--~~~~vkL~DF 534 (689)
||||.+ ++|.+++.... +++. ..++.|++.++ .|||+.+|+||||||+|||++.. ....++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 899955 58888875321 4444 35678888788 89999999999999999999753 2347999995
Q ss_pred CCc
Q 005590 535 GSS 537 (689)
Q Consensus 535 Gls 537 (689)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
No 434
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.72 E-value=4.7e-18 Score=157.38 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=89.2
Q ss_pred cccceEEEEecc-CCcccCC-CCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~-~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..+.|+|.|++| ||.++|. +|.+|||||++++|+.++..++||+++++++||+|||+|.|. ++.+.+ ++.|.++|
T Consensus 13 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~l~~~~L~~~V 90 (125)
T cd04029 13 KTQSLNVHVKECRNLAYGDEAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYS--ISHSQLETRTLQLSV 90 (125)
T ss_pred CCCeEEEEEEEecCCCccCCCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEE--CCHHHhCCCEEEEEE
Confidence 567899999999 9999986 588999999999999987788899999999999999999999 877766 56699999
Q ss_pred ccCCCCCCCcccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
||+|.+++++++|++.++....+-.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~~~ 115 (125)
T cd04029 91 WHYDRFGRNTFLGEVEIPLDSWNFD 115 (125)
T ss_pred EECCCCCCCcEEEEEEEeCCccccc
Confidence 9999999999999999988766554
No 435
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=8.5e-17 Score=165.30 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=108.2
Q ss_pred EEEEEEeccCCCCceEEEE-ECCCCcEEEEEEeecchh-------------------------hhHhHHHHHHHHHHhcc
Q 005590 383 YYVTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVNK 436 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~-d~~tg~~vAvKii~~~~~-------------------------~~~~~~~Ei~iL~~l~~ 436 (689)
|.+.+.||+|++|.||+|. +..+|+.||+|+++.... ......+|..+++.+..
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999 678999999999875321 01224578999999864
Q ss_pred cCCCCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC-ceeccCC
Q 005590 437 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLK 515 (689)
Q Consensus 437 ~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g-IvHrDLK 515 (689)
. ...+++++.. ...++||||++|..+....... ..+....+..++.||+.+|.+||+.| |+|||||
T Consensus 110 ~----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 110 A----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred c----CCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 2 1234444442 2348999999985432221111 12556677899999999999999999 9999999
Q ss_pred CCcEEEeccCCCeEEEEecCCcccccC
Q 005590 516 PENILIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 516 p~NILl~~~~~~~vkL~DFGls~~~~~ 542 (689)
|+||+++ ++.++|+|||.+.....
T Consensus 177 p~NIli~---~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 177 EYNILVH---DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhhEEEE---CCCEEEEEChhhhccCC
Confidence 9999998 56899999999865443
No 436
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.69 E-value=1.8e-17 Score=151.90 Aligned_cols=97 Identities=16% Similarity=0.045 Sum_probs=81.3
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCC--CCCCcceeeeeccccCCCcccccccccccccccC-cc-ccccccccc
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAP--HPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFK-GA-EKDLMPAEI 308 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~p--d~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~-~~-~~~L~~~V~ 308 (689)
+|+|+|++| ||+++| .|.+|||||++|+- .+.+++|+||+++++|+||+|||+|.|. ++.+ .+ ..+|.+.||
T Consensus 1 kL~V~Vi~A~~L~~~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~--v~~~~~~~~~~L~~~V~ 77 (120)
T cd08395 1 KVTVKVVAANDLKWQT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFI--LGNEDDPESYELHICVK 77 (120)
T ss_pred CEEEEEEECcCCCccc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEE--eeCcCCCceeEEEEEEE
Confidence 589999999 999999 59999999999962 3344557788888999999999999999 6644 44 456999999
Q ss_pred cCCCCCCCccccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEHG 333 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e~ 333 (689)
|+|.+++++++|.+.++.......+
T Consensus 78 D~d~~~~dd~IG~~~l~l~~~~~~~ 102 (120)
T cd08395 78 DYCFARDDRLVGVTVLQLRDIAQAG 102 (120)
T ss_pred EecccCCCCEEEEEEEEHHHCcCCC
Confidence 9998888999999998876666544
No 437
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.8e-17 Score=165.86 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=176.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+...++.+|.....|..|++++. |..++.|++.... .....+..|.-.|+ ...||||+.+++.+....+
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lr------ifshpnilpvlgacnsppn 261 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALR------IFSHPNILPVLGACNSPPN 261 (448)
T ss_pred hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCccee------eecCCchhhhhhhccCCCC
Confidence 34455667888999999999964 5667778876432 12223333443333 3468999999999999999
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEeccCCCeEEEEec
Q 005590 458 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 458 l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~g--IvHrDLKp~NILl~~~~~~~vkL~DF 534 (689)
+.++..||. |+|++++... ........++.+++..|++|++|||+.. |.---|....|+|+.+-+..+-.+|-
T Consensus 262 lv~isq~mp~gslynvlhe~----t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQ----TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred ceEeeeeccchHHHHHHhcC----ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 999999998 7888887643 3344777889999999999999999974 44556888999999644445555554
Q ss_pred CCcccccCCccccccCccccChhhhcCCCCC---chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 005590 535 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYD---QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 611 (689)
Q Consensus 535 Gls~~~~~~~~~~~gt~~Y~APE~l~~~~~s---~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~ 611 (689)
-++.+.. ...-.|.|++||.+..++-+ .+.|+||+++++|||-|...||..-++.+.-.+|.
T Consensus 338 kfsfqe~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----------- 402 (448)
T KOG0195|consen 338 KFSFQEV----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----------- 402 (448)
T ss_pred eeeeecc----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-----------
Confidence 4433221 12457899999999877644 57899999999999999999998877666544432
Q ss_pred hhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 005590 612 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL 680 (689)
..+++..+|...+ ..+..|+.-|+..||.+||..+.++
T Consensus 403 ----------------------leglrv~ippgis---------~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 ----------------------LEGLRVHIPPGIS---------RHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------------hccccccCCCCcc---------HHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1345555665332 4577999999999999999987654
No 438
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.67 E-value=1.9e-17 Score=155.74 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=90.1
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..++|+|.|++| ||+++| .|.+|||||+.|+|+.++.+++||+++++++||+|||+|.|. ++.+.+ +.+|.++||
T Consensus 13 ~~~~L~V~V~~a~nL~~~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~--i~~~~l~~~~L~~~V~ 89 (137)
T cd08409 13 TLNRLTVVVLRARGLRQLD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFK--VTSRQLDTASLSLSVM 89 (137)
T ss_pred CCCeEEEEEEEecCCCccc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEE--CCHHHhCccEEEEEEE
Confidence 467899999999 999999 788999999999999877778899999999999999999999 888878 467999999
Q ss_pred cCCCCCCCcccccccccccc-cccccCCCccc
Q 005590 309 DNSDTRDGEVNGALHEGKAD-AEEHGVATPDL 339 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~-~~~e~~~~~~~ 339 (689)
|.+.+++++++|++.++... ..+.....|.+
T Consensus 90 ~~~~~~~~~~lG~v~ig~~~~~~~~~~~hW~~ 121 (137)
T cd08409 90 QSGGVRKSKLLGRVVLGPFMYARGKELEHWND 121 (137)
T ss_pred eCCCCCCcceEEEEEECCcccCCChHHHHHHH
Confidence 99999999999999988532 22334444333
No 439
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.65 E-value=4.6e-17 Score=152.77 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=85.2
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
+.+.|+|.|++| ||+++|..|.+|||||+.+.++.+..+++||+++++|+||+|||+|.|. ++.+.+ +..|.++||
T Consensus 12 ~~~~L~V~vi~a~~L~~~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~--i~~~~l~~~~l~~~V~ 89 (135)
T cd08410 12 SAGRLNVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFK--VPQEELENVSLVFTVY 89 (135)
T ss_pred CCCeEEEEEEEecCCCcccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEe--CCHHHhCCCEEEEEEE
Confidence 557899999999 9999999999999999999888777778889999999999999999999 877777 456999999
Q ss_pred cCCCCCCCccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKA 327 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~ 327 (689)
|+|..++++++|.+.++..
T Consensus 90 d~d~~~~~~~iG~~~l~~~ 108 (135)
T cd08410 90 GHNVKSSNDFIGRIVIGQY 108 (135)
T ss_pred eCCCCCCCcEEEEEEEcCc
Confidence 9999999999999976653
No 440
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.64 E-value=8.8e-17 Score=150.27 Aligned_cols=96 Identities=16% Similarity=0.147 Sum_probs=87.4
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|++| ||+++|..|.+|||||+.+.++..+..+.||+++++|+||+|||+|.|. ++...+ ++.|.+.||
T Consensus 11 ~~~~L~V~Vi~a~~L~~~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--~~~~~l~~~~l~~~V~ 88 (133)
T cd08384 11 QRRGLIVGIIRCVNLAAMDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYD--IKHSDLAKKTLEITVW 88 (133)
T ss_pred CCCEEEEEEEEEcCCCCcCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEE--CCHHHhCCCEEEEEEE
Confidence 467899999999 9999999999999999999998877788899999999999999999999 776666 567999999
Q ss_pred cCCCCCCCcccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~ 328 (689)
|+|.+++++++|++.++...
T Consensus 89 d~d~~~~~~~lG~~~i~l~~ 108 (133)
T cd08384 89 DKDIGKSNDYIGGLQLGINA 108 (133)
T ss_pred eCCCCCCccEEEEEEEecCC
Confidence 99999999999999998753
No 441
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=9.9e-17 Score=176.97 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=86.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|++| +|++||.+|.+|||||++|+||+ +.|.||+++|+|+||+|||+|.|. |+.+++ .++|.++||
T Consensus 165 ~~~~L~V~V~qa~~Lp~~d~~g~sdpyVK~~llPdk--~~k~kT~v~r~tlnP~fnEtf~f~--v~~~~l~~~~L~l~V~ 240 (421)
T KOG1028|consen 165 ELNLLTVRVIQAHDLPAKDRGGTSDPYVKVYLLPDK--KGKFKTRVHRKTLNPVFNETFRFE--VPYEELSNRVLHLSVY 240 (421)
T ss_pred cCCEEEEEEEEecCCCcccCCCCCCCeeEEEEcCCC--CCcceeeeeecCcCCccccceEee--cCHHHhccCEEEEEEE
Confidence 567899999999 99999988899999999999998 558888889999999999999999 777766 888999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|+|+|++++++|++......++.
T Consensus 241 ~~drfsr~~~iGev~~~l~~~~~ 263 (421)
T KOG1028|consen 241 DFDRFSRHDFIGEVILPLGEVDL 263 (421)
T ss_pred ecCCcccccEEEEEEecCccccc
Confidence 99999999999999886444433
No 442
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.63 E-value=9e-17 Score=150.91 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=89.2
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|++| ||+++|..|.+|||||+++.+++++..++||.++++|+||.|||+|.|. ++.... ..+|.++||
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~--v~~~~~~~~~l~~~v~ 90 (136)
T cd08404 13 TTNRLTVVVLKARHLPKMDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFD--IPSEELEDISVEFLVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEE--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999998776678899999999999999999999 776666 556999999
Q ss_pred cCCCCCCCcccccccccccccccccCC
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEHGVA 335 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e~~~ 335 (689)
|+|.+++++++|++.++... .++...
T Consensus 91 d~d~~~~~~~iG~~~~~~~~-~~~~~~ 116 (136)
T cd08404 91 DSDRVTKNEVIGRLVLGPKA-SGSGGH 116 (136)
T ss_pred ECCCCCCCccEEEEEECCcC-CCchHH
Confidence 99999999999999998876 344433
No 443
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.62 E-value=2.5e-16 Score=152.28 Aligned_cols=118 Identities=18% Similarity=0.175 Sum_probs=97.4
Q ss_pred ccccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 230 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 230 ~~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
.+.+.|+|.|.+| ||+++|..|.+|||||++++++..+..++||+++++|+||.|||+|.|.. ++.+++ +..|.++|
T Consensus 24 ~~~g~L~V~Vi~A~nL~~~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~-~~~~~l~~~~L~i~V 102 (162)
T cd04020 24 PSTGELHVWVKEAKNLPALKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDG-VSPEDLSQACLELTV 102 (162)
T ss_pred CCCceEEEEEEeeeCCCCCCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEec-CCHHHhCCCEEEEEE
Confidence 3667899999999 99999999999999999999998888899999999999999999999983 344444 56699999
Q ss_pred ccCCCCCCCcccccccccccccccccCCCccchhchhhhhhhhe
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEI 351 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~e~~~~~~~l~~~~l~ee~~~ 351 (689)
||+|.+++++++|++.+...+....+. ...|++...++..+
T Consensus 103 ~d~d~~~~d~~lG~v~i~l~~~~~~~~---~~~w~~~~~~~~~~ 143 (162)
T cd04020 103 WDHDKLSSNDFLGGVRLGLGTGKSYGQ---AVDWMDSTGEEILL 143 (162)
T ss_pred EeCCCCCCCceEEEEEEeCCccccCCC---ccccccCChHHHHH
Confidence 999999999999999998877665442 23366555555443
No 444
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.61 E-value=3.4e-16 Score=144.69 Aligned_cols=98 Identities=10% Similarity=-0.031 Sum_probs=85.2
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
....|+|+|++| ||+++|.+|.+|||||+.++|++++ ++||+++++ +||+|||+|.|.. ++.+.+ +++|.+.||
T Consensus 14 ~~~~L~V~Vi~a~nL~~~~~~~~~d~yVk~~llp~~~~--~~kTkv~~~-~nP~fnE~F~f~~-i~~~~l~~~~L~~~V~ 89 (124)
T cd08389 14 SARKLTVTVIRAQDIPTKDRGGASSWQVHLVLLPSKKQ--RAKTKVQRG-PNPVFNETFTFSR-VEPEELNNMALRFRLY 89 (124)
T ss_pred CCCEEEEEEEEecCCCchhcCCCCCcEEEEEEccCCcc--eeecccccC-CCCcccCEEEECC-CCHHHhccCEEEEEEE
Confidence 457899999999 9999999999999999999998654 667887777 9999999999973 666666 777999999
Q ss_pred cCCCCCCCcccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
|++++++++++|++.++..+....
T Consensus 90 ~~~~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 90 GVERMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred ECCCcccCceEEEEEEeccccCCC
Confidence 999999999999999988776443
No 445
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.61 E-value=4.7e-16 Score=143.07 Aligned_cols=98 Identities=11% Similarity=0.033 Sum_probs=87.9
Q ss_pred cccceEEEEecc-CCcccC-CCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d-~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
..+.|+|.|.+| ||+++| ..|.+|||||++++|+..+..++||+++++++||+|||+|.|. ++...+ .+.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~--i~~~~l~~~~l~i~v 89 (123)
T cd08521 12 KTGSLEVHIKECRNLAYADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYH--ISKSQLETRTLQLSV 89 (123)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEe--CCHHHhCCCEEEEEE
Confidence 567899999999 999999 8889999999999998876678899999999999999999999 877666 56699999
Q ss_pred ccCCCCCCCcccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~ 330 (689)
||++.+++++++|++..+..+..
T Consensus 90 ~d~~~~~~~~~iG~~~i~l~~l~ 112 (123)
T cd08521 90 WHHDRFGRNTFLGEVEIPLDSWD 112 (123)
T ss_pred EeCCCCcCCceeeEEEEeccccc
Confidence 99999999999999998876664
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.61 E-value=8.8e-15 Score=146.80 Aligned_cols=133 Identities=22% Similarity=0.314 Sum_probs=103.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch---------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCe
Q 005590 387 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 387 ~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
+.||+|++|.||+|.+ .|..+++|+..... .......+|+.++..+.+ ++|+....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~ 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVDPEN 73 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEeCCC
Confidence 5789999999999986 77889999865321 112356678888888864 345555555666778
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCC
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 536 (689)
.++||||++| +|.+++... .. ....++.+|+.+|.+||+.|++|+|++|.|||++ .+.++|+|||.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~---~~~~~liDf~~ 140 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS---GGKIYLIDFGL 140 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE---CCCEEEEECCc
Confidence 8999999986 565554321 11 6788999999999999999999999999999998 57799999999
Q ss_pred cccc
Q 005590 537 SCFQ 540 (689)
Q Consensus 537 s~~~ 540 (689)
+...
T Consensus 141 a~~~ 144 (211)
T PRK14879 141 AEFS 144 (211)
T ss_pred ccCC
Confidence 8653
No 447
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.61 E-value=2.6e-16 Score=147.41 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=85.8
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~-~~L~~~V~ 308 (689)
..++|+|.|.+| +|+++|..|.+|||||++|.+++++.+++||+++++++||.|||+|.|. ++.+.++ ..|.++||
T Consensus 12 ~~~~L~V~v~~A~~L~~~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~~~~~~l~~~v~ 89 (134)
T cd08403 12 TAGRLTLTIIKARNLKAMDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFD--VPPENVDNVSLIIAVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCccccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 467899999999 9999999999999999999988877788899988999999999999998 7766664 45999999
Q ss_pred cCCCCCCCccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKA 327 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~ 327 (689)
|++++++++++|++.++..
T Consensus 90 d~~~~~~~~~IG~~~l~~~ 108 (134)
T cd08403 90 DYDRVGHNELIGVCRVGPN 108 (134)
T ss_pred ECCCCCCCceeEEEEECCC
Confidence 9999999999999999764
No 448
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.61 E-value=2.5e-16 Score=147.83 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=86.5
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
+.+.|+|.|.+| ||+++|.+|.+||||++++.++.++.++++|+++++++||+|||+|.|. ++.+.+ +..|.++||
T Consensus 13 ~~~~l~V~Vi~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~v~ 90 (136)
T cd08402 13 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFE--VPFEQIQKVHLIVTVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCcccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 567899999999 9999999999999999999988777778889999999999999999999 776666 446999999
Q ss_pred cCCCCCCCcccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~ 328 (689)
|++++++++++|.+.++...
T Consensus 91 d~~~~~~~~~iG~~~i~~~~ 110 (136)
T cd08402 91 DYDRIGKNDPIGKVVLGCNA 110 (136)
T ss_pred eCCCCCCCceeEEEEECCcc
Confidence 99999999999999998754
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=5.9e-16 Score=168.47 Aligned_cols=178 Identities=32% Similarity=0.416 Sum_probs=129.7
Q ss_pred CCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEe
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~D 533 (689)
..++||.|++|.. +|.+.+...... .. .+....+.++.|++.|+.| +|.+|+|+||.||+... ++.+||.|
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~-e~--~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~--d~q~kIgD 399 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTG-EE--RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSD--DDQLKIGD 399 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcc-cc--cchhHHHHHHHhhccchhh---ccchhhhcccccccccc--chhhhhhh
Confidence 3468999999984 666666533322 22 6677889999999999999 99999999999999984 67899999
Q ss_pred cCCcccccCCc---------cccccCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 005590 534 LGSSCFQTDNL---------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 603 (689)
Q Consensus 534 FGls~~~~~~~---------~~~~gt~~Y~APE~l~~~~~s~~~DIwSLGvil~eLlt-G~~PF~~~~~~~~l~~i~~~~ 603 (689)
||+........ +.-+||.+||+||.+.++.|+.++||||||+||+|++. =..+| +..+.+.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~------er~~t~~--- 470 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF------ERIATLT--- 470 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH------HHHHhhh---
Confidence 99876544322 33588999999999999999999999999999999997 22222 1111110
Q ss_pred CCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCC
Q 005590 604 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 683 (689)
Q Consensus 604 g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hp 683 (689)
.+. .-.+|+.. ....+.-.+|+..||...|.+||++.+..-|+
T Consensus 471 ------d~r-------------------------~g~ip~~~------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~ 513 (516)
T KOG1033|consen 471 ------DIR-------------------------DGIIPPEF------LQDYPEEYTLLQQLLSPSPEERPSAIEVALHE 513 (516)
T ss_pred ------hhh-------------------------cCCCChHH------hhcCcHHHHHHHHhcCCCcccCchHHHHhhhh
Confidence 000 01111100 01112235899999999999999999999999
Q ss_pred CCC
Q 005590 684 WLQ 686 (689)
Q Consensus 684 wf~ 686 (689)
|++
T Consensus 514 ~~~ 516 (516)
T KOG1033|consen 514 FLQ 516 (516)
T ss_pred hcC
Confidence 875
No 450
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.60 E-value=4.9e-16 Score=144.47 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=82.8
Q ss_pred cccceEEEEecc-CCcccCCC-CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~-g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
....|+|.|.+| ||+++|.. |.+||||++.|+|+.++ +.||+++++|+||+|||+|.|. .++.+++ +..|.+.|
T Consensus 14 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyV~v~l~~~~~~--~~kT~v~~~t~nP~wnE~F~f~-~~~~~~~~~~~L~~~V 90 (128)
T cd08388 14 EKKALLVNIIECRDLPAMDEQSGTSDPYVKLQLLPEKEH--KVKTRVLRKTRNPVYDETFTFY-GIPYNQLQDLSLHFAV 90 (128)
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCcCCEEEEEEeCCcCc--eeeccEEcCCCCCceeeEEEEc-ccCHHHhCCCEEEEEE
Confidence 457899999999 99999986 89999999999987543 5678888999999999999993 1666665 56699999
Q ss_pred ccCCCCCCCcccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~ 330 (689)
||+|++++++++|++.+...+.+
T Consensus 91 ~d~d~~~~d~~lG~~~i~L~~l~ 113 (128)
T cd08388 91 LSFDRYSRDDVIGEVVCPLAGAD 113 (128)
T ss_pred EEcCCCCCCceeEEEEEeccccC
Confidence 99999999999999988776553
No 451
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.60 E-value=5.7e-16 Score=143.40 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=88.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|++| ||+++|..|.+|||||+++++++++..++||+++++++||+|||+|.|. ++...+ +..|.+.||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~--i~~~~l~~~~l~i~v~ 91 (127)
T cd04030 14 QRQKLIVTVHKCRNLPPCDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFP--VSLEELKRRTLDVAVK 91 (127)
T ss_pred CCCEEEEEEEEEECCCCccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEe--cCHHHhcCCEEEEEEE
Confidence 357899999999 9999999999999999999999887889999999999999999999999 777666 566999999
Q ss_pred cCCCC--CCCccccccccccccccc
Q 005590 309 DNSDT--RDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~--~~~d~~G~v~~~~~~~~~ 331 (689)
|.+.+ ++++++|.+..+..+...
T Consensus 92 ~~~~~~~~~~~~iG~~~i~l~~l~~ 116 (127)
T cd04030 92 NSKSFLSREKKLLGQVLIDLSDLDL 116 (127)
T ss_pred ECCcccCCCCceEEEEEEecccccc
Confidence 99986 679999999998877644
No 452
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.60 E-value=5.8e-16 Score=142.93 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=86.6
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|.+| ||+++|.+|.+||||++++.|+.++ ++||+++++++||+|||+|.|. ++...+ +.+|.+.||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~--~~kT~v~~~t~~P~wne~f~f~--v~~~~l~~~~l~i~V~ 89 (124)
T cd08387 14 DMGILNVKLIQARNLQPRDFSGTADPYCKVRLLPDRSN--TKQSKIHKKTLNPEFDESFVFE--VPPQELPKRTLEVLLY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCeEEEEEecCCCC--cEeCceEcCCCCCCcccEEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999887654 5678888999999999999998 877666 567999999
Q ss_pred cCCCCCCCcccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
|++.+++++++|.+.++..+....
T Consensus 90 d~~~~~~~~~iG~~~i~l~~~~~~ 113 (124)
T cd08387 90 DFDQFSRDECIGVVELPLAEVDLS 113 (124)
T ss_pred ECCCCCCCceeEEEEEecccccCC
Confidence 999999999999999988777643
No 453
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.59 E-value=7.3e-16 Score=146.55 Aligned_cols=97 Identities=13% Similarity=0.009 Sum_probs=83.1
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccc-----------cccCcc-c
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-----------LHFKGA-E 300 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~-----------~~~~~~-~ 300 (689)
+|+|.|++| ||.+ .+|.+||||++++.++.++..++||+++++|+||+|||+|.|... ++.+++ .
T Consensus 1 kL~V~Vi~ArnL~~--~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~~~~~~~ 78 (148)
T cd04010 1 KLSVRVIECSDLAL--KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMPEEDAEK 78 (148)
T ss_pred CEEEEEEeCcCCCC--CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCCcccccE
Confidence 589999999 9998 689999999999999887777889999999999999999999931 134454 3
Q ss_pred cccccccccCCCCCCCcccccccccccccccc
Q 005590 301 KDLMPAEIDNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 301 ~~L~~~V~D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
..|.+.|||.+.+++++++|++.+....+...
T Consensus 79 ~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~ 110 (148)
T cd04010 79 LELRVDLWHASMGGGDVFLGEVRIPLRGLDLQ 110 (148)
T ss_pred EEEEEEEEcCCCCCCCceeEEEEEeccccccc
Confidence 56999999999999999999999987766654
No 454
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.59 E-value=1e-15 Score=141.22 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=85.4
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|++| ||+++|.+|.+||||++++.++.+...++||+++++|+||+|||+|.|.. ++.+.+ +..|.++||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~-~~~~~l~~~~l~~~V~ 92 (125)
T cd04031 14 VTSQLIVTVLQARDLPPRDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSN-VRRETLKERTLEVTVW 92 (125)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcc-cCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999987777788999999999999999999982 343444 566999999
Q ss_pred cCCCCCCCcccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~ 328 (689)
|++.+++++++|.+.....+
T Consensus 93 d~~~~~~~~~iG~~~i~l~~ 112 (125)
T cd04031 93 DYDRDGENDFLGEVVIDLAD 112 (125)
T ss_pred eCCCCCCCcEeeEEEEeccc
Confidence 99999999999999998766
No 455
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.59 E-value=5.6e-16 Score=145.49 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=86.7
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|.+| ||+++|..|.+|||||+.+.+..++..++||+++++++||+|||+|.|. ++.+.+ +..|.++||
T Consensus 13 ~~~~L~v~vi~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~--i~~~~~~~~~l~~~v~ 90 (136)
T cd08405 13 TANRITVNIIKARNLKAMDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFN--IPLERLRETTLIITVM 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999987766668899999999999999999999 776666 566999999
Q ss_pred cCCCCCCCccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADA 329 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~ 329 (689)
|++.+++++++|.+.++..+.
T Consensus 91 d~~~~~~~~~lG~~~i~~~~~ 111 (136)
T cd08405 91 DKDRLSRNDLIGKIYLGWKSG 111 (136)
T ss_pred ECCCCCCCcEeEEEEECCccC
Confidence 999999999999999887654
No 456
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.58 E-value=1e-15 Score=141.27 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=85.4
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
..+.|+|.|.+| ||+++|.+|.+||||++++.|+.++ ++||+++++++||+|||+|.|. ++...+ +..|.+.||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~l~~~~~~--~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~V~ 89 (124)
T cd08385 14 QSNQLTVGIIQAADLPAMDMGGTSDPYVKVYLLPDKKK--KFETKVHRKTLNPVFNETFTFK--VPYSELGNKTLVFSVY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCCEEEEEEEcCCCC--ceecccCcCCCCCceeeeEEEe--CCHHHhCCCEEEEEEE
Confidence 557899999999 9999999999999999999987653 6788888999999999999999 776555 566999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|+|++++++++|++.+...+...
T Consensus 90 d~d~~~~~~~lG~~~i~l~~~~~ 112 (124)
T cd08385 90 DFDRFSKHDLIGEVRVPLLTVDL 112 (124)
T ss_pred eCCCCCCCceeEEEEEecCcccC
Confidence 99999999999999998876644
No 457
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=6.2e-16 Score=170.66 Aligned_cols=96 Identities=13% Similarity=0.018 Sum_probs=90.0
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccc-cccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKD-LMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~-L~~~V~ 308 (689)
.+++|+|+|++| ||++||.+|.+|||||++++++.++.+|+||.++|+++||+|||+|.|. ++.+.++++ |.++||
T Consensus 296 ~~g~ltv~v~kar~L~~~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~--vp~~~l~~~~l~l~V~ 373 (421)
T KOG1028|consen 296 TAGRLTVVVIKARNLKSMDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD--VPPEQLAEVSLELTVW 373 (421)
T ss_pred CCCeEEEEEEEecCCCcccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe--CCHHHhheeEEEEEEE
Confidence 679999999999 9999999999999999999999999999999999999999999999998 999998655 999999
Q ss_pred cCCCCCCCcccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~ 328 (689)
|+|++++|+++|.+..+...
T Consensus 374 d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 374 DHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred EcccccccceeeEEEecCCC
Confidence 99999999999998877644
No 458
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.57 E-value=1.7e-14 Score=143.83 Aligned_cols=138 Identities=22% Similarity=0.201 Sum_probs=102.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-----------------------hhHhHHHHHHHHHHhcccCC
Q 005590 383 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------------------FFDQSLDEIKLLKLVNKNDP 439 (689)
Q Consensus 383 Y~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~-----------------------~~~~~~~Ei~iL~~l~~~~~ 439 (689)
|.+.+.||+|+||.||++.+. +|+.||||+++.+.. .......|..++..+.+..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~- 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG- 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence 778899999999999999864 799999999765321 0112456777888776532
Q ss_pred CCCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 005590 440 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 519 (689)
Q Consensus 440 ~~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NI 519 (689)
..++..++ ....++||||+.|..+..+.. ......++.+|+.++.++|+.||+||||||+||
T Consensus 95 ---i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Ni 156 (198)
T cd05144 95 ---FPVPKPID----WNRHAVVMEYIDGVELYRVRV-----------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNI 156 (198)
T ss_pred ---CCCCceee----cCCceEEEEEeCCcchhhccc-----------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccE
Confidence 13444443 234589999999753322210 134567889999999999999999999999999
Q ss_pred EEeccCCCeEEEEecCCcccccC
Q 005590 520 LIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 520 Ll~~~~~~~vkL~DFGls~~~~~ 542 (689)
+++. ++.++|+|||.+.....
T Consensus 157 ll~~--~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDD--DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcC--CCcEEEEECCccccCCC
Confidence 9984 78999999999855443
No 459
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.56 E-value=3.7e-14 Score=141.07 Aligned_cols=129 Identities=19% Similarity=0.256 Sum_probs=96.9
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecch---------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeE
Q 005590 388 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 388 ~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~---------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
.||+|+||.||++. ..|..+++|+..... ....+..+|+++++.+.+. ++.....++......
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~p~~~~~~~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA------GVNTPVVYDVDPDNK 72 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCCC
Confidence 37999999999998 467889999865321 1124566799999888753 233223333455667
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEEEEecCCc
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 537 (689)
++||||+.| ++.+++.... . .++.|++.+|.+||+.|++|+|++|.||+++ ++.++|+|||++
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~------------~-~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~---~~~~~liDfg~a 136 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGN------------D-ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR---DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEEECCccHHHHHhhcH------------H-HHHHHHHHHHHHHHHCCeecCCCCcceEEEE---CCcEEEEECCCC
Confidence 899999986 4555432110 0 7899999999999999999999999999998 578999999998
Q ss_pred ccc
Q 005590 538 CFQ 540 (689)
Q Consensus 538 ~~~ 540 (689)
...
T Consensus 137 ~~~ 139 (199)
T TIGR03724 137 KYS 139 (199)
T ss_pred cCC
Confidence 653
No 460
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.56 E-value=3e-15 Score=135.55 Aligned_cols=96 Identities=13% Similarity=0.018 Sum_probs=81.3
Q ss_pred cceEEEEecc-CCcccCCC-CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc--ccccccccc
Q 005590 233 DYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA--EKDLMPAEI 308 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~~-g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~--~~~L~~~V~ 308 (689)
+.|+|+|.+| ||+++|.. |.+||||++++.++++ .+.||+++++|+||+|||+|.|. +...++ +..|.++||
T Consensus 1 G~L~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~~~~--~~~kT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~ 76 (111)
T cd04041 1 GVLVVTIHRATDLPKADFGTGSSDPYVTASFAKFGK--PLYSTRIIRKDLNPVWEETWFVL--VTPDEVKAGERLSCRLW 76 (111)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCCccEEEEEccCCC--ccEeeeeECCCCCCccceeEEEE--eCchhccCCCEEEEEEE
Confidence 4689999999 99999998 9999999999987653 35678888999999999999997 443332 456999999
Q ss_pred cCCCCCCCcccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
|+|++++++++|.+.+...+..+.
T Consensus 77 d~d~~~~dd~lG~~~i~l~~l~~~ 100 (111)
T cd04041 77 DSDRFTADDRLGRVEIDLKELIED 100 (111)
T ss_pred eCCCCCCCCcceEEEEEHHHHhcC
Confidence 999999999999999987766643
No 461
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2.4e-14 Score=140.86 Aligned_cols=139 Identities=22% Similarity=0.293 Sum_probs=96.3
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHh-------------------------HHHHHHHHHHhcccCCC
Q 005590 386 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ-------------------------SLDEIKLLKLVNKNDPA 440 (689)
Q Consensus 386 ~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~-------------------------~~~Ei~iL~~l~~~~~~ 440 (689)
.+.||+|+||+||+|.+. +|+.||||+++........ ...|...+..+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-- 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG-- 78 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence 467999999999999976 8999999998764221111 124455555554321
Q ss_pred CCCceeEEEEEEEeCCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcE
Q 005590 441 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENI 519 (689)
Q Consensus 441 ~h~~Iv~l~~~f~~~~~l~lVmEy~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~-~gIvHrDLKp~NI 519 (689)
-.+++++.+ ...++||||+.++........... . ...++.++.+++.++.++|. .||+|+||||+||
T Consensus 79 --~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 79 --VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNI 146 (187)
T ss_pred --CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence 124444443 346899999997321111111100 1 15678899999999999999 9999999999999
Q ss_pred EEeccCCCeEEEEecCCcccccC
Q 005590 520 LIKSYQRCEIKIIDLGSSCFQTD 542 (689)
Q Consensus 520 Ll~~~~~~~vkL~DFGls~~~~~ 542 (689)
+++ ++.++|+|||.+.....
T Consensus 147 li~---~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 147 LVD---DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EEE---CCcEEEEECcccccccC
Confidence 998 67899999999865443
No 462
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.53 E-value=7.8e-15 Score=132.24 Aligned_cols=92 Identities=10% Similarity=-0.049 Sum_probs=77.0
Q ss_pred cceEEEEecc-CCcccCCC----CCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcccccccccc
Q 005590 233 DYGYLSSKEA-DLIDLQHN----VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAE 307 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~~----g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V 307 (689)
+.|.|.|++| ||+++|.. +.+||||++.+ ..+++||+++++++||+|||+|.|. +.....+..|.+.|
T Consensus 1 g~l~v~v~~A~~L~~~~~~~~~~~~~DPYv~v~~-----~~~~~kT~v~~~t~nPvWne~f~f~--v~~~~~~~~L~~~V 73 (108)
T cd04039 1 GVVFMEIKSITDLPPLKNMTRTGFDMDPFVIISF-----GRRVFRTSWRRHTLNPVFNERLAFE--VYPHEKNFDIQFKV 73 (108)
T ss_pred CEEEEEEEeeeCCCCccccCCCCCccCceEEEEE-----CCEeEeeeeecCCCCCcccceEEEE--EeCccCCCEEEEEE
Confidence 4688999999 99998842 34799999998 2346689999999999999999998 65544556799999
Q ss_pred ccCCCCCCCccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
||+|++++++++|.+.+...+...
T Consensus 74 ~D~d~~~~dd~IG~~~l~L~~l~~ 97 (108)
T cd04039 74 LDKDKFSFNDYVATGSLSVQELLN 97 (108)
T ss_pred EECCCCCCCcceEEEEEEHHHHHh
Confidence 999999999999999998776655
No 463
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.52 E-value=6.1e-15 Score=136.60 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=76.9
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCccccccccccccccc---Ccc-cccccccccc
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF---KGA-EKDLMPAEID 309 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~---~~~-~~~L~~~V~D 309 (689)
++|.|.+| ||.++|.+|.+||||++.+. ..+.||+++++|+||+|||+|.|. ++. +.. ...|.+.|||
T Consensus 1 ~~V~V~~A~~L~~~d~~g~~dpYv~v~l~-----~~~~kT~v~~~t~nP~Wne~f~F~--v~~~~~~~~~~~~l~~~v~d 73 (126)
T cd08682 1 VQVTVLQARGLLCKGKSGTNDAYVIIQLG-----KEKYSTSVKEKTTSPVWKEECSFE--LPGLLSGNGNRATLQLTVMH 73 (126)
T ss_pred CEEEEEECcCCcCCCCCcCCCceEEEEEC-----CeeeeeeeecCCCCCEeCceEEEE--ecCcccCCCcCCEEEEEEEE
Confidence 47999999 99999999999999999993 346788888999999999999998 665 233 5569999999
Q ss_pred CCCCCCCcccccccccccccc
Q 005590 310 NSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 310 ~d~~~~~d~~G~v~~~~~~~~ 330 (689)
++++++++++|.+.+...+..
T Consensus 74 ~~~~~~d~~iG~~~i~l~~l~ 94 (126)
T cd08682 74 RNLLGLDKFLGQVSIPLNDLD 94 (126)
T ss_pred ccccCCCceeEEEEEEHHHhh
Confidence 999999999999998876654
No 464
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.52 E-value=8.7e-15 Score=135.15 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=84.3
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
....|+|.|.+| ||+++|.+|.+||||+++++|+.++ +.+|+++++++||+|||+|.|.. ++.+.+ ++.|.++||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~--~~kT~v~~~t~~P~Wne~f~f~~-~~~~~l~~~~l~~~v~ 90 (125)
T cd08386 14 QESTLTLKILKAVELPAKDFSGTSDPFVKIYLLPDKKH--KLETKVKRKNLNPHWNETFLFEG-FPYEKLQQRVLYLQVL 90 (125)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCceEEEEECCCCCc--ceeeeeecCCCCCccceeEEEcc-cCHHHhCCCEEEEEEE
Confidence 456899999999 9999999999999999999987654 56888889999999999999973 344444 567999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|+|++++++++|++++...+...
T Consensus 91 d~d~~~~~~~iG~~~i~l~~l~~ 113 (125)
T cd08386 91 DYDRFSRNDPIGEVSLPLNKVDL 113 (125)
T ss_pred eCCCCcCCcEeeEEEEecccccC
Confidence 99999999999999998877654
No 465
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.52 E-value=8.7e-15 Score=136.97 Aligned_cols=99 Identities=14% Similarity=0.045 Sum_probs=84.9
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCC--CcceeeeeccccCCCcccccccccccccccCc---cccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPG--TEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG---AEKDLM 304 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~--~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~---~~~~L~ 304 (689)
..+.|+|.|.+| +|+++|..|.+||||++++.++.+ +..++||+++++|+||+|||+|.|. +.... .+..|.
T Consensus 14 ~~~~L~V~Vi~A~~L~~~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~~~~~~~~l~ 91 (133)
T cd04009 14 SEQSLRVEILNARNLLPLDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFN--VPPEQCSVEGALLL 91 (133)
T ss_pred CCCEEEEEEEEeeCCCCcCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEE--echhhcccCCCEEE
Confidence 346899999999 999999999999999999998765 3568899999999999999999999 55432 255699
Q ss_pred cccccCCCCCCCccccccccccccccc
Q 005590 305 PAEIDNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 305 ~~V~D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
++|||++++++++++|++++...+..+
T Consensus 92 ~~V~d~d~~~~d~~iG~~~i~l~~l~~ 118 (133)
T cd04009 92 FTVKDYDLLGSNDFEGEAFLPLNDIPG 118 (133)
T ss_pred EEEEecCCCCCCcEeEEEEEeHHHCCc
Confidence 999999999999999999987766654
No 466
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.51 E-value=9.7e-14 Score=159.28 Aligned_cols=135 Identities=21% Similarity=0.269 Sum_probs=102.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----h-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 451 (689)
Q Consensus 381 ~rY~i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~----~-----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~ 451 (689)
..|...+.||+|+||+||++.+. +..+++|+.... . .......+|+++++.+++ ++++....+
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~ 404 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR------AGVPTPVIY 404 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc------cCCCeeEEE
Confidence 44566789999999999999864 344555543211 1 123456788888888864 467776666
Q ss_pred EEeCCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCCCeEE
Q 005590 452 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 530 (689)
Q Consensus 452 f~~~~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~~~vk 530 (689)
.......++||||++| +|.+++. ....++.|++.+|.+||+.||+||||||+|||++ ++.++
T Consensus 405 ~~~~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---~~~~~ 467 (535)
T PRK09605 405 DVDPEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---DDRLY 467 (535)
T ss_pred EEeCCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---CCcEE
Confidence 6677778999999986 5555443 2467899999999999999999999999999994 67899
Q ss_pred EEecCCcccc
Q 005590 531 IIDLGSSCFQ 540 (689)
Q Consensus 531 L~DFGls~~~ 540 (689)
|+|||+++..
T Consensus 468 liDFGla~~~ 477 (535)
T PRK09605 468 LIDFGLGKYS 477 (535)
T ss_pred EEeCcccccC
Confidence 9999998653
No 467
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.51 E-value=9.3e-15 Score=132.15 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=79.9
Q ss_pred eEEEEecc-CCcccCC-CCCCCcceeeecCCCCCCcceeeeeccccCCCccc-ccccccccccccCcc-ccccccccccC
Q 005590 235 GYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDW-IEGFKGSSDLHFKGA-EKDLMPAEIDN 310 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~-~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~-ne~f~~~~~~~~~~~-~~~L~~~V~D~ 310 (689)
|+|.|.+| ||++||. +|.+||||++++.. .+.||+++++++||.| ||+|.|. ++...+ +..|.++|||+
T Consensus 1 l~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~--i~~~~l~~~~l~i~V~d~ 73 (110)
T cd08688 1 LKVRVVAARDLPVMDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFE--VDDEELQDEPLQIRVMDH 73 (110)
T ss_pred CEEEEEEEECCCccccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEE--cChHHcCCCeEEEEEEeC
Confidence 67999999 9999994 78999999999943 6778888899999999 9999999 776655 56799999999
Q ss_pred CCCCCCcccccccccccccccc
Q 005590 311 SDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 311 d~~~~~d~~G~v~~~~~~~~~e 332 (689)
+.+++++++|++.....+....
T Consensus 74 d~~~~~~~iG~~~~~l~~l~~~ 95 (110)
T cd08688 74 DTYSANDAIGKVYIDLNPLLLK 95 (110)
T ss_pred CCCCCCCceEEEEEeHHHhccc
Confidence 9999999999999988777663
No 468
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.50 E-value=1.9e-14 Score=132.54 Aligned_cols=89 Identities=18% Similarity=0.068 Sum_probs=75.1
Q ss_pred eEEEEecc-CCcccC-CCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCC
Q 005590 235 GYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 312 (689)
Q Consensus 235 l~v~i~e~-~L~~~d-~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~ 312 (689)
|+|.|.+| ||++++ .+|.+||||++++ ++.++.||+++++|+||+|||+|.|. ++.. .++|.+.|||+++
T Consensus 2 l~v~v~~a~~L~~~~~~~g~sDpYv~v~l----~~~~~~kT~v~~kt~~P~WnE~F~f~--v~~~--~~~l~~~v~d~~~ 73 (121)
T cd08401 2 LKIKIGEAKNLPPRSGPNKMRDCYCTVNL----DQEEVFRTKTVEKSLCPFFGEDFYFE--IPRT--FRHLSFYIYDRDV 73 (121)
T ss_pred eEEEEEEccCCCCCCCCCCCcCcEEEEEE----CCccEEEeeEEECCCCCccCCeEEEE--cCCC--CCEEEEEEEECCC
Confidence 68999999 999985 5789999999999 23346778888999999999999999 7643 3579999999999
Q ss_pred CCCCccccccccccccccc
Q 005590 313 TRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 313 ~~~~d~~G~v~~~~~~~~~ 331 (689)
+++++++|.+.+...+...
T Consensus 74 ~~~~~~iG~~~i~l~~l~~ 92 (121)
T cd08401 74 LRRDSVIGKVAIKKEDLHK 92 (121)
T ss_pred CCCCceEEEEEEEHHHccC
Confidence 9999999999887665553
No 469
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=1.8e-13 Score=127.62 Aligned_cols=134 Identities=20% Similarity=0.233 Sum_probs=108.1
Q ss_pred EEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeCCeEEEEEEc
Q 005590 385 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 464 (689)
Q Consensus 385 i~~~LG~G~fG~Vyla~d~~tg~~vAvKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy 464 (689)
+.+.||.|.++.||++... +..+++|+...... ...+.+|..+++.+++. ..++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence 4577999999999999964 37899999876543 45788899999999764 24678888888777889999999
Q ss_pred cccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEeccCCCeEEEEecCCccc
Q 005590 465 LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL---GIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 539 (689)
Q Consensus 465 ~~g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~---gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 539 (689)
+.+..... ++......++.+++.+|..||.. +++|+|++|.||+++. .+.++++|||.+..
T Consensus 75 ~~g~~~~~------------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDE------------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD--GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeeccc------------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC--CcEEEEEecccccC
Confidence 98653221 13455677899999999999985 7999999999999985 67899999998753
No 470
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.49 E-value=1e-13 Score=153.63 Aligned_cols=197 Identities=21% Similarity=0.254 Sum_probs=144.4
Q ss_pred CCCCceeEEEEEEEeCCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCCC
Q 005590 440 ADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGI-IHCDLKPE 517 (689)
Q Consensus 440 ~~h~~Iv~l~~~f~~~~~l~lVmEy~~-g~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gI-vHrDLKp~ 517 (689)
+.|.|+.++++...+....++|.+||. |+|.+.+..... .+.......+++.|+.||.|||..-| .|+.++..
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~-----~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI-----KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc-----CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 468899999999999999999999998 788888765322 26667788899999999999998866 99999999
Q ss_pred cEEEeccCCCeEEEEecCCcccccCCc-----cccccCccccChhhhcCCC-------CCchhhHHHHHHHHHHHHhCCC
Q 005590 518 NILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLP-------YDQKIDLWSLGCILAELWTGEV 585 (689)
Q Consensus 518 NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~Y~APE~l~~~~-------~s~~~DIwSLGvil~eLltG~~ 585 (689)
|++++. ...+||+|||+........ .......-|.|||.+.+.. .+.+.|+||+|++++|+++...
T Consensus 79 nClvd~--~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 79 NCLVDS--RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cceeee--eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999995 8899999999987664311 1112234599999997642 4667999999999999999999
Q ss_pred CCCCChH----HHHHHHHHhhcCCCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHH
Q 005590 586 LFPNDAV----VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDF 661 (689)
Q Consensus 586 PF~~~~~----~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dL 661 (689)
||..... .+++.++.+ .+ .....|...... ...+++..+
T Consensus 157 ~~~~~~~~~~~~eii~~~~~-~~--------------------------------~~~~rP~i~~~~----e~~~~l~~l 199 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK-GG--------------------------------SNPFRPSIELLN----ELPPELLLL 199 (484)
T ss_pred ccccccccCChHHHHHHHHh-cC--------------------------------CCCcCcchhhhh----hcchHHHHH
Confidence 9975322 223322221 00 000111111110 122367899
Q ss_pred HHHhcccCCCCCcCHHHHH
Q 005590 662 VRTLLEINPQRRPTAREAL 680 (689)
Q Consensus 662 I~~mL~~dP~kRpTa~ElL 680 (689)
++.||..+|.+||+++++-
T Consensus 200 ~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 200 VARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred HHHhcccChhhCccHHHHH
Confidence 9999999999999998864
No 471
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.47 E-value=2.9e-14 Score=131.23 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=84.9
Q ss_pred cccceEEEEecc-CCcccC-CCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-cccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 307 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d-~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V 307 (689)
.++.|+|.|.+| ||+++| ..|.+||||+++++|+.++ +.+|+++++++||+|||+|.|. ++...+ .+.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyV~v~l~~~~~~--~~~T~v~~~~~~P~wne~f~f~--i~~~~l~~~~l~i~v 87 (123)
T cd08390 12 EEEQLTVSLIKARNLPPRTKDVAHCDPFVKVCLLPDERR--SLQSKVKRKTQNPNFDETFVFQ--VSFKELQRRTLRLSV 87 (123)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCCcEEEEEEeeCCCC--ceEeeeEcCCCCCccceEEEEE--cCHHHhcccEEEEEE
Confidence 457899999999 999999 6889999999999988754 4578888999999999999999 877666 45699999
Q ss_pred ccCCCCCCCcccccccccccccccc
Q 005590 308 IDNSDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 308 ~D~d~~~~~d~~G~v~~~~~~~~~e 332 (689)
||++.+++++++|.+.+...+....
T Consensus 88 ~d~~~~~~~~~iG~~~i~L~~l~~~ 112 (123)
T cd08390 88 YDVDRFSRHCIIGHVLFPLKDLDLV 112 (123)
T ss_pred EECCcCCCCcEEEEEEEeccceecC
Confidence 9999999999999998877665553
No 472
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.47 E-value=5.6e-14 Score=130.15 Aligned_cols=90 Identities=10% Similarity=-0.052 Sum_probs=74.4
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcccccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 309 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D 309 (689)
..++|+|+|.+| ||+ +|..|.+|||||+++. .++.||+++++++||+|||+|.|. .........|.++|||
T Consensus 26 ~~~~L~V~V~~A~~L~-~d~~g~~DPYVkV~~~-----~~~~kT~vi~~t~nPvWNE~F~f~--~~~~~~~~~L~v~V~D 97 (127)
T cd04032 26 GLATLTVTVLRATGLW-GDYFTSTDGYVKVFFG-----GQEKRTEVIWNNNNPRWNATFDFG--SVELSPGGKLRFEVWD 97 (127)
T ss_pred CcEEEEEEEEECCCCC-cCcCCCCCeEEEEEEC-----CccccCceecCCCCCcCCCEEEEe--cccCCCCCEEEEEEEe
Confidence 457899999999 997 5888899999999982 227788888999999999999986 2221234569999999
Q ss_pred CCCCCCCcccccccccccc
Q 005590 310 NSDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 310 ~d~~~~~d~~G~v~~~~~~ 328 (689)
+|.+++++++|.+.+....
T Consensus 98 ~d~~s~dd~IG~~~i~l~~ 116 (127)
T cd04032 98 RDNGWDDDLLGTCSVVPEA 116 (127)
T ss_pred CCCCCCCCeeEEEEEEecC
Confidence 9999999999999887653
No 473
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=6.4e-15 Score=169.65 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=184.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEeC
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~rY~i~~~LG~G~fG~Vyla~d~~-tg~~vAvKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
...|.+.+.||+|+|+.|-++.... ....+|+|.+... ......+..|..+-+.+.. |.|++++++...+.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~-----h~n~~~~~~~~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSK-----HSNTVHMIEPSSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccc-----cccccccCCccCCC
Confidence 3568888889999999999998643 3445666665543 2233344445555444432 88999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEeccCCC-eEEEE
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH-SLGIIHCDLKPENILIKSYQRC-EIKII 532 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH-~~gIvHrDLKp~NILl~~~~~~-~vkL~ 532 (689)
+..+++++|..| .+.+.+.. ......+...+..++.|+..+|.|+| ..++.|+||||+|.+++. .+ .+++.
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~----~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~ 167 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISH----PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIA 167 (601)
T ss_pred cccccccCccccccccccccc----CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCC
Confidence 999999999775 34443311 11112667788899999999999999 999999999999999985 55 89999
Q ss_pred ecCCcccccC-C-----cccccc-CccccChhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 005590 533 DLGSSCFQTD-N-----LCLYVQ-SRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 604 (689)
Q Consensus 533 DFGls~~~~~-~-----~~~~~g-t~~Y~APE~l~~~-~~s~~~DIwSLGvil~eLltG~~PF~~~~~~~~l~~i~~~~g 604 (689)
|||+|..... . ....+| ++.|+|||...+. ......|+||+|+++.-+++|..||.........
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-------- 239 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-------- 239 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--------
Confidence 9999876544 1 223578 9999999999884 4567899999999999999999999654322200
Q ss_pred CCcHHHHhhhhhhhhhhhccccchhhhhccccccccCCccchhhhhccCCcHHHHHHHHHhcccCCCCCcCHHHHHcCCC
Q 005590 605 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 684 (689)
Q Consensus 605 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~ElL~hpw 684 (689)
...+.. . ....... ..........+++.++|..+|..|.+.+++-.+||
T Consensus 240 ------------~~~~~~-~-----------~~~~~~~-------~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 240 ------------YSSWKS-N-----------KGRFTQL-------PWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred ------------ceeecc-c-----------ccccccC-------ccccCChhhhhcccccccCCchhcccccccccccc
Confidence 000000 0 0000000 11122344678999999999999999999999999
Q ss_pred CCC
Q 005590 685 LQH 687 (689)
Q Consensus 685 f~~ 687 (689)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 975
No 474
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.45 E-value=6.4e-14 Score=127.63 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=76.4
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCCC
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 313 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~~ 313 (689)
++|.|.+| ||+++|.+|.+||||++++ +..+.||+++++|+||.|||+|.|. +... .+..|.++|||++.+
T Consensus 2 ~~V~v~~a~~L~~~~~~~~~dPyv~v~~-----~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~-~~~~l~v~v~d~~~~ 73 (116)
T cd08376 2 VTIVLVEGKNLPPMDDNGLSDPYVKFRL-----GNEKYKSKVCSKTLNPQWLEQFDLH--LFDD-QSQILEIEVWDKDTG 73 (116)
T ss_pred EEEEEEEEECCCCCCCCCCCCcEEEEEE-----CCEeEecccccCCCCCceeEEEEEE--ecCC-CCCEEEEEEEECCCC
Confidence 68999999 9999999999999999998 2356788888999999999999998 5433 255699999999999
Q ss_pred CCCccccccccccccccc
Q 005590 314 RDGEVNGALHEGKADAEE 331 (689)
Q Consensus 314 ~~~d~~G~v~~~~~~~~~ 331 (689)
++++++|.+.....+...
T Consensus 74 ~~~~~iG~~~~~l~~l~~ 91 (116)
T cd08376 74 KKDEFIGRCEIDLSALPR 91 (116)
T ss_pred CCCCeEEEEEEeHHHCCC
Confidence 999999999987765543
No 475
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.45 E-value=5.2e-14 Score=134.19 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=78.3
Q ss_pred ceEEEEecc-CCcccCCCC--------------CCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCc
Q 005590 234 YGYLSSKEA-DLIDLQHNV--------------VGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG 298 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g--------------~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~ 298 (689)
.|+|+|.+| +|++||..+ .+||||++.+.. ++.||+++++++||+|||+|.|. +....
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~--v~~p~ 73 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFP--EMFPP 73 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEE--eeCCC
Confidence 478999999 999999665 689999999842 35578888999999999999998 54444
Q ss_pred cccccccccccCCCCCCCcccccccccccccccccC
Q 005590 299 AEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGV 334 (689)
Q Consensus 299 ~~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~~~e~~ 334 (689)
.+..|.++|||+|.+++++++|.+.+...++...+.
T Consensus 74 ~~~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~ 109 (151)
T cd04018 74 LCERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGD 109 (151)
T ss_pred cCCEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCc
Confidence 556799999999999999999999998776655543
No 476
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.45 E-value=1.3e-13 Score=131.58 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=76.5
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccC------cc-cccccc
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFK------GA-EKDLMP 305 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~------~~-~~~L~~ 305 (689)
.++|....+ +|++.+.+|.+|||||++|+....+..+.||+++|+|+||+|||+|.|. ++.. .+ .+.|.+
T Consensus 5 el~i~~~~~~~l~~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~--I~~~~~~~~R~l~~~~L~~ 82 (155)
T cd08690 5 ELTIVRCIGIPLPSGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLN--INRKHRSFQRVFKRHGLKF 82 (155)
T ss_pred EEEEEEeeccccCCCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEE--eccccchhhhhccCCcEEE
Confidence 344444444 5889999999999999998544567789999999999999999999999 6655 23 455999
Q ss_pred ccccCCCCC-CCccccccccccccccc
Q 005590 306 AEIDNSDTR-DGEVNGALHEGKADAEE 331 (689)
Q Consensus 306 ~V~D~d~~~-~~d~~G~v~~~~~~~~~ 331 (689)
+|||++.+. +++++|.+.......+.
T Consensus 83 ~V~d~~~f~~~D~~iG~~~i~L~~l~~ 109 (155)
T cd08690 83 EVYHKGGFLRSDKLLGTAQVKLEPLET 109 (155)
T ss_pred EEEeCCCcccCCCeeEEEEEEcccccc
Confidence 999999985 69999999886655544
No 477
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.44 E-value=7.7e-14 Score=127.85 Aligned_cols=91 Identities=11% Similarity=0.036 Sum_probs=76.7
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCCC
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 313 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~~ 313 (689)
|+|.|++| ||++.|..|.+||||++.+...+ ..++||+++++++||+|||+|.|. +... ....|.++|||+|.+
T Consensus 2 L~V~vi~a~~L~~~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~--i~~~-~~~~l~v~v~d~d~~ 76 (119)
T cd04036 2 LTVRVLRATNITKGDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFR--IQSQ-VKNVLELTVMDEDYV 76 (119)
T ss_pred eEEEEEEeeCCCccCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEE--eCcc-cCCEEEEEEEECCCC
Confidence 78999999 99999999999999999996543 346778888999999999999998 6554 344599999999999
Q ss_pred CCCccccccccccccccc
Q 005590 314 RDGEVNGALHEGKADAEE 331 (689)
Q Consensus 314 ~~~d~~G~v~~~~~~~~~ 331 (689)
+++++|.+.+.......
T Consensus 77 -~~~~iG~~~~~l~~l~~ 93 (119)
T cd04036 77 -MDDHLGTVLFDVSKLKL 93 (119)
T ss_pred -CCcccEEEEEEHHHCCC
Confidence 89999999887765543
No 478
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.44 E-value=1.4e-13 Score=126.41 Aligned_cols=86 Identities=8% Similarity=-0.040 Sum_probs=72.3
Q ss_pred cceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeecccc-CCCcccccccccccccccCccccccccccccC
Q 005590 233 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 310 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~-tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~ 310 (689)
+.|+|.|++| +|+.++ -|.+||||++.+ +..+.||+++++ ++||+|||+|.|. +... ...|.++|||.
T Consensus 2 g~L~v~v~~Ak~l~~~~-~g~sDPYv~i~l-----g~~~~kT~v~~~~~~nP~WNe~F~f~--v~~~--~~~l~~~V~d~ 71 (121)
T cd04016 2 GRLSITVVQAKLVKNYG-LTRMDPYCRIRV-----GHAVYETPTAYNGAKNPRWNKTIQCT--LPEG--VDSIYIEIFDE 71 (121)
T ss_pred cEEEEEEEEccCCCcCC-CCCCCceEEEEE-----CCEEEEeEEccCCCCCCccCeEEEEE--ecCC--CcEEEEEEEeC
Confidence 5799999999 988887 689999999999 334668887654 8999999999998 6543 24599999999
Q ss_pred CCCCCCcccccccccccc
Q 005590 311 SDTRDGEVNGALHEGKAD 328 (689)
Q Consensus 311 d~~~~~d~~G~v~~~~~~ 328 (689)
|.+++++++|.+......
T Consensus 72 d~~~~dd~iG~~~i~l~~ 89 (121)
T cd04016 72 RAFTMDERIAWTHITIPE 89 (121)
T ss_pred CCCcCCceEEEEEEECch
Confidence 999999999999887753
No 479
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.43 E-value=1e-13 Score=127.80 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=77.2
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 312 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~ 312 (689)
+|+|.|.+| ||.++|.+|.+||||++++ ...+.+|+++++|+||.|||+|.|. +.... ...|.++|||++.
T Consensus 1 ~L~v~vi~a~~L~~~d~~~~~DPyv~v~~-----~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~~-~~~l~~~v~d~~~ 72 (123)
T cd04025 1 RLRCHVLEARDLAPKDRNGTSDPFVRVFY-----NGQTLETSVVKKSCYPRWNEVFEFE--LMEGA-DSPLSVEVWDWDL 72 (123)
T ss_pred CEEEEEEEeeCCCCCCCCCCcCceEEEEE-----CCEEEeceeecCCCCCccCcEEEEE--cCCCC-CCEEEEEEEECCC
Confidence 589999999 9999999999999999998 2345678888999999999999998 55433 4559999999999
Q ss_pred CCCCccccccccccccccc
Q 005590 313 TRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 313 ~~~~d~~G~v~~~~~~~~~ 331 (689)
+++++++|.+.....++..
T Consensus 73 ~~~~~~iG~~~~~l~~l~~ 91 (123)
T cd04025 73 VSKNDFLGKVVFSIQTLQQ 91 (123)
T ss_pred CCCCcEeEEEEEEHHHccc
Confidence 9999999999998766644
No 480
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.43 E-value=4.8e-14 Score=131.54 Aligned_cols=103 Identities=16% Similarity=0.081 Sum_probs=89.8
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
+.+.|+|.|.+| ||+++|..|..||||++.+.++..+..+++|++++++.||.|||+|.|. ++...+ +..|.++||
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~--i~~~~l~~~~l~~~v~ 89 (134)
T cd00276 12 TAERLTVVVLKARNLPPSDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFD--VPAEQLEEVSLVITVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEE--CCHHHhCCcEEEEEEE
Confidence 457899999999 9999999999999999999998877678888888999999999999999 777665 566999999
Q ss_pred cCCCCCCCcccccccccccccccccCCC
Q 005590 309 DNSDTRDGEVNGALHEGKADAEEHGVAT 336 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~e~~~~ 336 (689)
|.+.+++++++|.+.++..+ .+.+...
T Consensus 90 d~~~~~~~~~lG~~~i~l~~-~~~~~~~ 116 (134)
T cd00276 90 DKDSVGRNEVIGQVVLGPDS-GGEELEH 116 (134)
T ss_pred ecCCCCCCceeEEEEECCCC-CCcHHHH
Confidence 99999999999999998877 4444433
No 481
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.43 E-value=1.1e-13 Score=127.41 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=84.5
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 308 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~ 308 (689)
.+.+|+|.|.+| +|+++|..|.+|||||++++++..+..+.+|+++++++||+|||+|.|.. +..... +..|.++||
T Consensus 13 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~-~~~~~~~~~~l~~~v~ 91 (123)
T cd04035 13 ANSALHCTIIRAKGLKAMDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYG-ITEEDIQRKTLRLLVL 91 (123)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcC-CCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999988777788999999999999999999962 443333 456999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|++.+ +++++|.+.++..+...
T Consensus 92 d~~~~-~~~~iG~~~i~l~~l~~ 113 (123)
T cd04035 92 DEDRF-GNDFLGETRIPLKKLKP 113 (123)
T ss_pred EcCCc-CCeeEEEEEEEcccCCC
Confidence 99999 88999999887765544
No 482
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.43 E-value=2.1e-12 Score=132.96 Aligned_cols=133 Identities=17% Similarity=0.192 Sum_probs=96.6
Q ss_pred Eec-cCCCCceEEEEECCCCcEEEEEEeecch--------------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005590 388 YLG-SAAFSKVFQAQDLHTGVDVCLKIIKNDK--------------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 452 (689)
Q Consensus 388 ~LG-~G~fG~Vyla~d~~tg~~vAvKii~~~~--------------~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f 452 (689)
.|| .||.|+||.+.. .+..++||.+.... .......+|+.++..+.+.. ..+++.+++.
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEeee
Confidence 477 899999999975 47889999885311 12245678999999997642 2246666654
Q ss_pred EeCC----eEEEEEEcccc--chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEeccCC
Q 005590 453 YHLE----HLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 526 (689)
Q Consensus 453 ~~~~----~l~lVmEy~~g--~L~~l~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDLKp~NILl~~~~~ 526 (689)
.... ..++|||++.| +|.+++... .+++. .+.||+.+|.+||+.||+|+||||.|||++. +
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~--~ 178 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP--D 178 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC--C
Confidence 4322 23599999986 555554321 14433 3678999999999999999999999999985 5
Q ss_pred CeEEEEecCCccc
Q 005590 527 CEIKIIDLGSSCF 539 (689)
Q Consensus 527 ~~vkL~DFGls~~ 539 (689)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 6899999998865
No 483
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.43 E-value=1.3e-13 Score=126.76 Aligned_cols=90 Identities=12% Similarity=0.054 Sum_probs=76.4
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 312 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~ 312 (689)
.|+|.|++| ||+++|.+|.+||||++.+. .++..||+++++|+||+|||+|.|. +.. ....|.++|||++.
T Consensus 1 ~L~v~v~~a~~L~~~d~~g~~Dpyv~v~~~----~~~~~kT~~~~~t~nP~Wne~f~f~--v~~--~~~~l~~~v~D~d~ 72 (121)
T cd04042 1 QLDIHLKEGRNLAARDRGGTSDPYVKFKYG----GKTVYKSKTIYKNLNPVWDEKFTLP--IED--VTQPLYIKVFDYDR 72 (121)
T ss_pred CeEEEEEEeeCCCCcCCCCCCCCeEEEEEC----CEEEEEeeeccCCCCCccceeEEEE--ecC--CCCeEEEEEEeCCC
Confidence 378999999 99999999999999999983 2346778888999999999999998 542 34569999999999
Q ss_pred CCCCccccccccccccccc
Q 005590 313 TRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 313 ~~~~d~~G~v~~~~~~~~~ 331 (689)
+++++++|.+++...+...
T Consensus 73 ~~~~~~iG~~~~~l~~l~~ 91 (121)
T cd04042 73 GLTDDFMGSAFVDLSTLEL 91 (121)
T ss_pred CCCCcceEEEEEEHHHcCC
Confidence 9999999999987765553
No 484
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.42 E-value=1.2e-13 Score=125.05 Aligned_cols=80 Identities=10% Similarity=0.058 Sum_probs=68.1
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccC---
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN--- 310 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~--- 310 (689)
|+|+|++| ||+ |.+||||++.+.+.++...+.||+++++|+||+|||+|.|. ++ ..++|.+.|||+
T Consensus 1 L~V~V~~A~~L~-----~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~--l~---~s~~L~~~v~d~~~~ 70 (118)
T cd08686 1 LNVIVHSAQGFK-----QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIE--LE---GSQTLRILCYEKCYS 70 (118)
T ss_pred CEEEEEeCCCCC-----CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEE--eC---CCCEEEEEEEEcccc
Confidence 68999999 995 67999999999998766678999999999999999999998 64 255799999998
Q ss_pred ----CCCCCCcccccccc
Q 005590 311 ----SDTRDGEVNGALHE 324 (689)
Q Consensus 311 ----d~~~~~d~~G~v~~ 324 (689)
|.++.++.+|.-..
T Consensus 71 ~~~~d~~~~d~~~G~g~i 88 (118)
T cd08686 71 KVKLDGEGTDAIMGKGQI 88 (118)
T ss_pred cccccccCcccEEEEEEE
Confidence 57777888866544
No 485
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.42 E-value=1.3e-13 Score=127.95 Aligned_cols=90 Identities=9% Similarity=0.011 Sum_probs=77.1
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCccccccccccccccc-Ccc-ccccccccccC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF-KGA-EKDLMPAEIDN 310 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~-~~~-~~~L~~~V~D~ 310 (689)
+|+|.|++| ||.++|.+|.+||||++++.. .++||+++++++||+|||+|.|. +.. ... +..|.++|||.
T Consensus 1 ~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~d~ 73 (127)
T cd04022 1 KLVVEVVDAQDLMPKDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFN--VSDPSRLSNLVLEVYVYND 73 (127)
T ss_pred CeEEEEEEeeCCCCCCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEE--ccCHHHccCCeEEEEEeeC
Confidence 589999999 999999999999999999854 35678888999999999999999 543 333 45699999999
Q ss_pred CCCC-CCcccccccccccccc
Q 005590 311 SDTR-DGEVNGALHEGKADAE 330 (689)
Q Consensus 311 d~~~-~~d~~G~v~~~~~~~~ 330 (689)
++++ +++++|.+.+...+..
T Consensus 74 ~~~~~~d~~lG~v~i~l~~l~ 94 (127)
T cd04022 74 RRSGRRRSFLGRVRISGTSFV 94 (127)
T ss_pred CCCcCCCCeeeEEEEcHHHcC
Confidence 9997 7999999999876665
No 486
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.41 E-value=1.3e-13 Score=127.48 Aligned_cols=87 Identities=15% Similarity=0.033 Sum_probs=73.1
Q ss_pred eEEEEecc-C---CcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccC
Q 005590 235 GYLSSKEA-D---LIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 310 (689)
Q Consensus 235 l~v~i~e~-~---L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~ 310 (689)
|+|.|++| | |.++|..|.+||||++.+ ..++.+|+++++++||+|||+|.|. +.. ....|.++|||+
T Consensus 2 L~v~v~~A~~~~~l~~~d~~g~sDPYv~i~~-----g~~~~rTk~~~~~~nP~WnE~f~f~--v~~--~~~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVLRAKDGRGSTDAYCVAKY-----GPKWVRTRTVEDSSNPRWNEQYTWP--VYD--PCTVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccccccccCCCCCeeEEEEE-----CCEEeEcCcccCCCCCcceeEEEEE--ecC--CCCEEEEEEEEC
Confidence 78999999 9 999999999999999998 3346688888999999999999998 532 223699999999
Q ss_pred CCCC------CCcccccccccccccc
Q 005590 311 SDTR------DGEVNGALHEGKADAE 330 (689)
Q Consensus 311 d~~~------~~d~~G~v~~~~~~~~ 330 (689)
+.++ .++++|++.+......
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~ 98 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLE 98 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHcc
Confidence 9984 7999999988654443
No 487
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.40 E-value=2.7e-13 Score=127.35 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=80.4
Q ss_pred ccccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccc
Q 005590 230 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI 308 (689)
Q Consensus 230 ~~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~ 308 (689)
..-+.|+|.|++| ||+++|..|.+||||++.+ ...+.||+++++|+||.|||+|.|. +... ....|.++||
T Consensus 12 ~~~G~L~V~Vi~A~~L~~~d~~g~~DPYv~v~~-----~~~~~kT~vi~~t~nP~Wne~f~f~--v~~~-~~~~l~i~V~ 83 (136)
T cd08375 12 SGIGRLMVVIVEGRDLKPCNSNGKSDPYCEVSM-----GSQEHKTKVVSDTLNPKWNSSMQFF--VKDL-EQDVLCITVF 83 (136)
T ss_pred CCcEEEEEEEEEeeCCCCCCCCCCcCcEEEEEE-----CCEeeeccccCCCCCCccCceEEEE--ecCc-cCCEEEEEEE
Confidence 4568899999999 9999999999999999998 2346788888999999999999998 5432 2456999999
Q ss_pred cCCCCCCCccccccccccccccc
Q 005590 309 DNSDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 309 D~d~~~~~d~~G~v~~~~~~~~~ 331 (689)
|+|.+++++++|.+.....+...
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~ 106 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILK 106 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhcc
Confidence 99999999999999988766655
No 488
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.39 E-value=2.8e-13 Score=126.27 Aligned_cols=112 Identities=21% Similarity=0.246 Sum_probs=93.1
Q ss_pred cceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCC
Q 005590 233 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNS 311 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d 311 (689)
+.|+|.|.+| ||++.|..|..||||++.+.+++++..+.+|++.++++||.|||+|.|. +.....+..|.+.|||++
T Consensus 13 ~~l~v~i~~a~nL~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~--~~~~~~~~~l~v~v~d~~ 90 (131)
T cd04026 13 NKLTVEVREAKNLIPMDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFD--LKPADKDRRLSIEVWDWD 90 (131)
T ss_pred CEEEEEEEEeeCCCCcCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEe--CCchhcCCEEEEEEEECC
Confidence 6789999999 9999999999999999999988777778889988999999999999998 665445667999999999
Q ss_pred CCCCCcccccccccccccccccCCCccchhchhhhhhhh
Q 005590 312 DTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECE 350 (689)
Q Consensus 312 ~~~~~d~~G~v~~~~~~~~~e~~~~~~~l~~~~l~ee~~ 350 (689)
.+++++++|.++....+........ |+....+...
T Consensus 91 ~~~~~~~iG~~~~~l~~l~~~~~~~----w~~L~~~~~~ 125 (131)
T cd04026 91 RTTRNDFMGSLSFGVSELIKMPVDG----WYKLLNQEEG 125 (131)
T ss_pred CCCCcceeEEEEEeHHHhCcCccCc----eEECcCcccc
Confidence 9999999999999877776543333 5555544443
No 489
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.39 E-value=2.5e-13 Score=129.77 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=80.3
Q ss_pred cccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCc------------------------ceeeeeccccCCCcccc
Q 005590 231 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE------------------------KSSSYSSSKRGSSIDWI 285 (689)
Q Consensus 231 ~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~------------------------~k~kt~~~k~tlnP~~n 285 (689)
+...|+|.|.+| ||.++|.+|.+||||++.+.+..++. ..++|.++++|+||.||
T Consensus 26 ~~~~L~V~vi~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~Wn 105 (153)
T cd08676 26 PIFVLKVTVIEAKGLLAKDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQTLNPVWN 105 (153)
T ss_pred CeEEEEEEEEeccCCcccCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCCCCCccc
Confidence 456899999999 99999999999999999998764331 23678888999999999
Q ss_pred cccccccccccCccccccccccccCCCCCCCcccccccccccccccccCCC
Q 005590 286 EGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVAT 336 (689)
Q Consensus 286 e~f~~~~~~~~~~~~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~~~e~~~~ 336 (689)
|+|.|. +... .+..|.++|||++ ++++|.+.+...++...+...
T Consensus 106 E~F~f~--v~~~-~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~ 149 (153)
T cd08676 106 ETFRFE--VEDV-SNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDS 149 (153)
T ss_pred cEEEEE--eccC-CCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCC
Confidence 999998 5432 2456999999998 889999999887776444433
No 490
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.39 E-value=2.8e-13 Score=127.87 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=76.1
Q ss_pred ccceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccC
Q 005590 232 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 310 (689)
Q Consensus 232 ~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~ 310 (689)
.+-|+|.|+.+ ||...|+.|+|||||-+.+ +..|.||++.++++||+|||.|+|. + .+....|.++|||+
T Consensus 5 vGLL~v~v~~g~~L~~rD~~~sSDPyVVl~l-----g~q~lkT~~v~~n~NPeWNe~ltf~--v--~d~~~~lkv~VyD~ 75 (168)
T KOG1030|consen 5 VGLLRVRVKRGKNLAIRDFLGSSDPYVVLEL-----GNQKLKTRVVYKNLNPEWNEELTFT--V--KDPNTPLKVTVYDK 75 (168)
T ss_pred ceEEEEEEEeecCeeeeccccCCCCeEEEEE-----CCeeeeeeeecCCCCCcccceEEEE--e--cCCCceEEEEEEeC
Confidence 35789999999 9999999899999999999 5668888899999999999999987 3 34456699999999
Q ss_pred CCCCCCcccccccccc
Q 005590 311 SDTRDGEVNGALHEGK 326 (689)
Q Consensus 311 d~~~~~d~~G~v~~~~ 326 (689)
|.++..|++|+..+..
T Consensus 76 D~fs~dD~mG~A~I~l 91 (168)
T KOG1030|consen 76 DTFSSDDFMGEATIPL 91 (168)
T ss_pred CCCCcccccceeeecc
Confidence 9999999999997754
No 491
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.39 E-value=2e-13 Score=126.86 Aligned_cols=91 Identities=12% Similarity=-0.008 Sum_probs=77.1
Q ss_pred eEEEEecc-CCcc--cCCCCC--CCcceeeecCCCCCCcceeeeeccccCCC--ccccccccccccccc-----------
Q 005590 235 GYLSSKEA-DLID--LQHNVV--GDSSTDCDLAPHPGTEKSSSYSSSKRGSS--IDWIEGFKGSSDLHF----------- 296 (689)
Q Consensus 235 l~v~i~e~-~L~~--~d~~g~--sDpyvk~~l~pd~~~~~k~kt~~~k~tln--P~~ne~f~~~~~~~~----------- 296 (689)
|||+|-+| |++. ++.+|. +|||||++|.+. +.+|+||.++++++| |.||+.|.|. ++.
T Consensus 2 LRViIw~~~~v~~~~~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~--~~~~~~~~~~~~~~ 77 (133)
T cd08374 2 LRVIVWNTRDVLNDDTNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFP--FDYLPAEKKIVVIK 77 (133)
T ss_pred EEEEEEECcCCcccccccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEe--eecCCccceeEEEe
Confidence 79999999 9554 455784 999999999997 567889999999999 9999999998 554
Q ss_pred ----------Ccc-ccccccccccCCCCCCCccccccccccccc
Q 005590 297 ----------KGA-EKDLMPAEIDNSDTRDGEVNGALHEGKADA 329 (689)
Q Consensus 297 ----------~~~-~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~ 329 (689)
+.+ ..+|.++|||.|++++++++|++.++....
T Consensus 78 ~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l 121 (133)
T cd08374 78 KEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSIL 121 (133)
T ss_pred eccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhc
Confidence 455 566999999999999999999998866433
No 492
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.39 E-value=3.7e-13 Score=128.49 Aligned_cols=90 Identities=20% Similarity=0.146 Sum_probs=75.3
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeecccc-CCCcccccccccccccccCccccccccccccCC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNS 311 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~-tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d 311 (689)
+|+|.|.+| ||+++|.+|.+||||++.+.. ++.||++.++ |+||+|||+|.|. ++.. ....|.+.|||++
T Consensus 1 ~L~V~Vi~A~~L~~~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~--v~~~-~~~~l~v~V~d~~ 72 (150)
T cd04019 1 YLRVTVIEAQDLVPSDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFV--AAEP-FEDHLILSVEDRV 72 (150)
T ss_pred CEEEEEEEeECCCCCCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEE--ecCc-cCCeEEEEEEEec
Confidence 689999999 999999999999999999943 4666765554 7999999999998 6432 2346899999999
Q ss_pred CCCCCccccccccccccccc
Q 005590 312 DTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 312 ~~~~~d~~G~v~~~~~~~~~ 331 (689)
..++++++|.+.+...+...
T Consensus 73 ~~~~dd~lG~v~i~L~~l~~ 92 (150)
T cd04019 73 GPNKDEPLGRAVIPLNDIER 92 (150)
T ss_pred CCCCCCeEEEEEEEHHHCcc
Confidence 99999999999998876643
No 493
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=3.2e-13 Score=126.07 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=79.7
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCC--CCCcceeeeeccccCCCcccccccccccccccCccccccccccccC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPH--PGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 310 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd--~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~ 310 (689)
.|+|.|.+| ||+++|..|.+||||++.+... .++..+.+|+++++|+||.|||+|.|. ++.. +..|.+.|||+
T Consensus 1 ~L~v~Vi~a~~L~~~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~--~~~l~~~v~d~ 76 (133)
T cd04033 1 ILRVKVLAGIDLAKKDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFR--VNPR--EHRLLFEVFDE 76 (133)
T ss_pred CEEEEEEEeECCCcccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEE--EcCC--CCEEEEEEEEC
Confidence 478999999 9999999999999999999865 223346688888999999999999998 5543 34589999999
Q ss_pred CCCCCCcccccccccccccccc
Q 005590 311 SDTRDGEVNGALHEGKADAEEH 332 (689)
Q Consensus 311 d~~~~~d~~G~v~~~~~~~~~e 332 (689)
+.+++++++|.+.....+....
T Consensus 77 ~~~~~~~~iG~~~i~l~~l~~~ 98 (133)
T cd04033 77 NRLTRDDFLGQVEVPLNNLPTE 98 (133)
T ss_pred CCCCCCCeeEEEEEEHHHCCCc
Confidence 9999999999999877666543
No 494
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.37 E-value=6.2e-13 Score=123.09 Aligned_cols=90 Identities=10% Similarity=-0.033 Sum_probs=77.3
Q ss_pred cceEEEEecc-CCcccCC--CCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcccccccccccc
Q 005590 233 DYGYLSSKEA-DLIDLQH--NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 309 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~--~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D 309 (689)
+.|+|.|.+| ||+++|. .|.+||||++++ +..+.+|+++++|+||.|||+|.|. +.. .....|.++|||
T Consensus 1 g~l~v~v~~a~~L~~~~~~~~~~~dPyv~v~~-----~~~~~kT~~~~~t~~P~Wne~f~~~--~~~-~~~~~l~i~v~d 72 (128)
T cd04024 1 GVLRVHVVEAKDLAAKDRSGKGKSDPYAILSV-----GAQRFKTQTIPNTLNPKWNYWCEFP--IFS-AQNQLLKLILWD 72 (128)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCcCCeEEEEE-----CCEEEecceecCCcCCccCCcEEEE--ecC-CCCCEEEEEEEE
Confidence 4688999999 9999999 899999999998 2356788888999999999999998 554 234569999999
Q ss_pred CCCCCCCcccccccccccccc
Q 005590 310 NSDTRDGEVNGALHEGKADAE 330 (689)
Q Consensus 310 ~d~~~~~d~~G~v~~~~~~~~ 330 (689)
++.+++++++|.+.+...+..
T Consensus 73 ~~~~~~~~~lG~~~i~l~~~~ 93 (128)
T cd04024 73 KDRFAGKDYLGEFDIALEEVF 93 (128)
T ss_pred CCCCCCCCcceEEEEEHHHhh
Confidence 999999999999999876665
No 495
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.36 E-value=5.3e-13 Score=123.40 Aligned_cols=89 Identities=11% Similarity=-0.031 Sum_probs=73.0
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCCC
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 313 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~~ 313 (689)
++|.|++| ||+++|..|.+||||++.+... ..++||.++++|+||+|||+|.|. +... ....|.++|||+|.+
T Consensus 2 lrV~Vi~a~~L~~~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~--~~~~-~~~~L~~~V~d~d~~ 75 (124)
T cd04037 2 VRVYVVRARNLQPKDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELE--ATLP-GNSILKISVMDYDLL 75 (124)
T ss_pred EEEEEEECcCCCCCCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEE--ecCC-CCCEEEEEEEECCCC
Confidence 78999999 9999999999999999999432 234566667889999999999997 4322 134599999999999
Q ss_pred CCCccccccccccccc
Q 005590 314 RDGEVNGALHEGKADA 329 (689)
Q Consensus 314 ~~~d~~G~v~~~~~~~ 329 (689)
++++++|.+.....+.
T Consensus 76 ~~dd~iG~~~i~l~~~ 91 (124)
T cd04037 76 GSDDLIGETVIDLEDR 91 (124)
T ss_pred CCCceeEEEEEeeccc
Confidence 9999999998866433
No 496
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.35 E-value=9.1e-13 Score=121.82 Aligned_cols=91 Identities=11% Similarity=-0.038 Sum_probs=76.5
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 312 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~ 312 (689)
.++|.|.+| ||+++|.+|.+||||++++... +.++.||+++++++||.|||+|.|. ++.. ....|.++|||++.
T Consensus 2 ~~~V~v~~a~~L~~~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~--i~~~-~~~~L~i~v~d~d~ 76 (126)
T cd04043 2 LFTIRIVRAENLKADSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELE--VPAG-EPLWISATVWDRSF 76 (126)
T ss_pred EEEEEEEEeECCCCCCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEE--cCCC-CCCEEEEEEEECCC
Confidence 578999999 9999999999999999987543 2345688888999999999999998 6554 34569999999999
Q ss_pred CCCCccccccccccccc
Q 005590 313 TRDGEVNGALHEGKADA 329 (689)
Q Consensus 313 ~~~~d~~G~v~~~~~~~ 329 (689)
+++++++|.+.+.....
T Consensus 77 ~~~~~~iG~~~i~l~~~ 93 (126)
T cd04043 77 VGKHDLCGRASLKLDPK 93 (126)
T ss_pred CCCCceEEEEEEecCHH
Confidence 99999999998876543
No 497
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.34 E-value=8.9e-13 Score=121.32 Aligned_cols=87 Identities=13% Similarity=0.029 Sum_probs=73.5
Q ss_pred eEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCccccccccccccCCCC
Q 005590 235 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 313 (689)
Q Consensus 235 l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~~ 313 (689)
|+|.|.+| ||+++|.+|.+||||++.+- ..+..||+++++|+||+|||.|.|. ++.. .+.|.+.|||++.+
T Consensus 2 l~v~vi~a~~L~~~d~~g~~DPYv~v~~~----~~~~~kT~v~~~t~nP~Wne~f~~~--~~~~--~~~l~v~v~d~~~~ 73 (121)
T cd04054 2 LYIRIVEGKNLPAKDITGSSDPYCIVKVD----NEVIIRTATVWKTLNPFWGEEYTVH--LPPG--FHTVSFYVLDEDTL 73 (121)
T ss_pred EEEEEEEeeCCcCCCCCCCCCceEEEEEC----CEeeeeeeeEcCCCCCcccceEEEe--eCCC--CCEEEEEEEECCCC
Confidence 78999999 99999999999999999982 2234678888999999999999998 5432 35699999999999
Q ss_pred CCCccccccccccccc
Q 005590 314 RDGEVNGALHEGKADA 329 (689)
Q Consensus 314 ~~~d~~G~v~~~~~~~ 329 (689)
++++++|.+..+....
T Consensus 74 ~~d~~iG~~~~~~~~~ 89 (121)
T cd04054 74 SRDDVIGKVSLTREVI 89 (121)
T ss_pred CCCCEEEEEEEcHHHh
Confidence 9999999998875443
No 498
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.34 E-value=8.1e-13 Score=119.57 Aligned_cols=89 Identities=13% Similarity=0.012 Sum_probs=73.8
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccccccCcc-ccccccccccCC
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEIDNS 311 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~~~~~~~-~~~L~~~V~D~d 311 (689)
.++|.|.+| ||. +|..||||++.+.. +++||+++++++||.|||+|.|....+...+ +..|.++|||++
T Consensus 5 ~l~V~v~~a~~L~----~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~i~V~d~~ 75 (111)
T cd04011 5 QVRVRVIEARQLV----GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIKISVYDSR 75 (111)
T ss_pred EEEEEEEEcccCC----CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEEEEEEcCc
Confidence 578999999 998 68899999999962 3557888899999999999999833344444 556999999999
Q ss_pred CCCCCccccccccccccccc
Q 005590 312 DTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 312 ~~~~~d~~G~v~~~~~~~~~ 331 (689)
.+++++++|++.+.......
T Consensus 76 ~~~~~~~iG~~~i~l~~v~~ 95 (111)
T cd04011 76 SLRSDTLIGSFKLDVGTVYD 95 (111)
T ss_pred ccccCCccEEEEECCccccC
Confidence 99999999999998766644
No 499
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.34 E-value=8.2e-13 Score=120.69 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=73.6
Q ss_pred cceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeecc-ccCCCcccccccccccccccCccccccccccccC
Q 005590 233 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSS-KRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 310 (689)
Q Consensus 233 ~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~-k~tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~ 310 (689)
+.|+|.|.+| ||+++|..|.+||||++.+.. .++||++. +.++||+|||+|.|. ++.. ....|.++|||+
T Consensus 1 g~L~V~v~~A~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~--v~~~-~~~~l~i~v~d~ 72 (118)
T cd08681 1 GTLVVVVLKARNLPNKRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFE--ITED-KKPILKVAVFDD 72 (118)
T ss_pred CEEEEEEEEccCCCCCCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEE--ecCC-CCCEEEEEEEeC
Confidence 4789999999 999999999999999999843 34556654 568999999999998 6654 345599999999
Q ss_pred CCCCCCccccccccccccccc
Q 005590 311 SDTRDGEVNGALHEGKADAEE 331 (689)
Q Consensus 311 d~~~~~d~~G~v~~~~~~~~~ 331 (689)
+..+ ++++|++.+...+...
T Consensus 73 ~~~~-~~~iG~~~~~l~~~~~ 92 (118)
T cd08681 73 DKRK-PDLIGDTEVDLSPALK 92 (118)
T ss_pred CCCC-CcceEEEEEecHHHhh
Confidence 9887 8999999987765543
No 500
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.33 E-value=1.3e-12 Score=122.57 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=71.1
Q ss_pred ceEEEEecc-CCcccCCCCCCCcceeeecCCCCCCcceeeeeccccCCCcccccccccccc-cc--cCcc---ccccccc
Q 005590 234 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-LH--FKGA---EKDLMPA 306 (689)
Q Consensus 234 ~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~tlnP~~ne~f~~~~~-~~--~~~~---~~~L~~~ 306 (689)
+|+|.|.+| +|+++|.+|.+|||||+.+. ..++||+++++|+||+|||+|.|... +. .+.. ...|.++
T Consensus 2 ~l~v~V~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~~~l~v~ 76 (135)
T cd04017 2 QLRAYIYQARDLLAADKSGLSDPFARVSFL-----NQSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNPPLVVVE 76 (135)
T ss_pred EEEEEEEEeecCcCCCCCCCCCCEEEEEEC-----CeeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCCCEEEEE
Confidence 578999999 99999999999999999984 24677888899999999999999721 11 1111 2458999
Q ss_pred cccCCCCCCCcccccccc
Q 005590 307 EIDNSDTRDGEVNGALHE 324 (689)
Q Consensus 307 V~D~d~~~~~d~~G~v~~ 324 (689)
|||+|.+++++++|++..
T Consensus 77 V~d~d~~~~d~~iG~~~i 94 (135)
T cd04017 77 LFDQDSVGKDEFLGRSVA 94 (135)
T ss_pred EEeCcCCCCCccceEEEe
Confidence 999999999999999975
Done!