Query 005590
Match_columns 689
No_of_seqs 366 out of 2988
Neff 7.3
Searched_HMMs 29240
Date Wed Mar 27 00:56:33 2013
Command hhsearch -i /local_scratch/syshi/lefta3m3/005590.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H3_5-5//hhsearch_pdb/005590hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfq_A PKC-B, PKC-beta, protei 1.0 1 1 502.9 35.0 415 208-687 141-603 (674)
2 4b99_A Mitogen-activated prote 1.0 1 1 415.0 29.1 281 379-688 52-351 (398)
3 4b9d_A Serine/threonine-protei 1.0 1 1 413.9 24.1 253 381-688 24-283 (350)
4 4fie_A Serine/threonine-protei 1.0 1 1 412.6 28.5 253 380-688 150-407 (423)
5 4fih_A Serine/threonine-protei 1.0 1 1 411.6 27.4 253 380-688 73-330 (346)
6 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 406.9 23.2 250 380-687 31-296 (311)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 403.7 25.6 249 381-687 13-268 (275)
8 3uto_A Twitchin; kinase, muscl 1.0 1 1 402.0 28.1 260 378-688 154-417 (573)
9 4f9c_A Cell division cycle 7-r 1.0 1 1 401.1 25.2 294 378-687 18-358 (361)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 394.6 20.0 248 381-687 58-328 (336)
No 1
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=1.00 E-value=1 Score=502.89 Aligned_cols=415 Identities=21% Similarity=0.323 Sum_probs=325.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC--------CCCCCEEEEEECC-CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCC
Q ss_conf 2334324578999754579984--------3563049988226-973127878899622543078999852023100135
Q 005590 208 LKDCAAYGCSEPLCKCCAGEGK--------INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR 278 (689)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~v~i~e~-~L~~~d~~g~sDpyvk~~l~pd~~~~~k~kt~~~k~ 278 (689)
|+.|... .+++|+..+++.+ ...+.|+|.|.+| +|.+||.+|.+|||||+.++|+++...+++|+++++
T Consensus 141 H~~C~~~--v~~~C~~d~~~~~g~i~~~~~~~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~ 218 (674)
T 3pfq_A 141 HKRCVMN--VPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKS 218 (674)
T ss_dssp CSSTTSS--SCCCSSSCSSCCSCEEEEEEEECSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSS
T ss_pred HHHHHHC--CCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 3333120--57655644333542323531000340245320001347778666667531136555765554445444666
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHEEEEEEEE
Q ss_conf 78962101322365565576664334522358877888534532356332011267786301100024253201455310
Q 005590 279 GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIH 358 (689)
Q Consensus 279 tlnP~~ne~f~~~~~~~~~~~~~~L~~~V~D~d~~~~~~~~G~v~~~~~~~~~e~~~~~~~l~f~~l~ee~~~~~lr~i~ 358 (689)
|+||+|||+|.|. +.....++.|.+.|||+|.+++++++|.+.+...++......+| +..+......+......
T Consensus 219 tlnP~wne~f~f~--~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w----~~Lls~~~g~~~~~p~~ 292 (674)
T 3pfq_A 219 SLNPEWNETFRFQ--LKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGW----FKLLSQEEGEYFNVPVP 292 (674)
T ss_dssp CSSCEEEEEEEEE--CCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCCEEEE----EECBCTTGGGTCCEECC
T ss_pred CCCCCCCCEEEEE--CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCC----EEECCCCCCEECCCCCC
T ss_conf 6677753015653--15687665135677521455544324453236555314776663----35215145601146888
Q ss_pred C--------------CCCC--CCC-----CCCCCC-----EEECCEECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEE
Q ss_conf 0--------------3568--867-----788855-----4628132375899999325888753999988789379999
Q 005590 359 R--------------KNRT--GFE-----ENKDLP-----IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK 412 (689)
Q Consensus 359 ~--------------~~~~--~~~-----~~~~~p-----i~~~~~i~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIK 412 (689)
. .... ... ...... .....+..++|++.+.||+|+||.||+++++.+++.||+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK 372 (674)
T 3pfq_A 293 PEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVK 372 (674)
T ss_dssp C----------------------------------------------CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEE
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEE
T ss_conf 75555458899887640346777786555543200013567656543102279989805998899999999999389999
Q ss_pred EEECCH----HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCC-CHHHHHHHHHCCCCCCCCCH
Q ss_conf 960541----3467599999999996016999987225877899847849999971421-43889863202699755598
Q 005590 413 IIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTL 487 (689)
Q Consensus 413 ii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~ 487 (689)
++++.. ........|..++..+. .|++|++++++|.....+|+||||+.+ +|..++..... +++
T Consensus 373 ~l~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~------~~~ 441 (674)
T 3pfq_A 373 ILKKDVVIQDDDVECTMVEKRVLALPG-----KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR------FKE 441 (674)
T ss_dssp EEEHHHHHHTTTTHHHHHHHHHHTCTT-----CCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSS------CCH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCC------CCH
T ss_conf 986011245778999999999998556-----998488888899858878999937679849999975389------888
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECCCCCCCC---CCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 899999997799999999889530358999579802578709998368842136---88642236765457032318999
Q 005590 488 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT---DNLCLYVQSRSYRAPEVIIGLPY 564 (689)
Q Consensus 488 ~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFGls~~~~---~~~~~~~gt~~y~APE~l~~~~~ 564 (689)
..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++.... ......+||+.|+|||++.+..|
T Consensus 442 ~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~--~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 519 (674)
T 3pfq_A 442 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY 519 (674)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECS--SSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECC--CCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 999999999999999998679075448765589837--896899665401114568864234568876359766367899
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 91256999999999999399999998399999999841199867887332235443200111000000001000147754
Q 005590 565 DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE 644 (689)
Q Consensus 565 s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 644 (689)
+.++||||||+++|+|++|.+||.+.+..+++..|... ...+|.
T Consensus 520 ~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-----------------------------------~~~~p~- 563 (674)
T 3pfq_A 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----------------------------------NVAYPK- 563 (674)
T ss_dssp STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS-----------------------------------CCCCCT-
T ss_pred CCCCEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC-----------------------------------CCCCCC-
T ss_conf 95016806189999997099998998989999999848-----------------------------------778885-
Q ss_pred CHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCH-----HHHHCCCCCCC
Q ss_conf 30112014791999999998130098999389-----99980989888
Q 005590 645 SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 687 (689)
Q Consensus 645 ~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa-----~elL~Hpwf~~ 687 (689)
..+..+++||++||+.||++|+++ .++++||||+.
T Consensus 564 --------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 564 --------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp --------TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred --------CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCC
T ss_conf --------4799999999997447987878998775999862842138
No 2
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=414.99 Aligned_cols=281 Identities=31% Similarity=0.490 Sum_probs=230.5
Q ss_pred ECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCH---HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 2375899999325888753999988789379999960541---3467599999999996016999987225877899847
Q 005590 379 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 379 i~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~---~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
+.++|++++.||+|+||+||+|+++.+|+.||||+++... ....++.+|+++|+.++ ||||+++++++...
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~~~ 125 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK------HDNIIAIKDILRPT 125 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC------CTTBCCEEEECCCS
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC------CCCCCEEEEEEECC
T ss_conf 789748988984260849999999899989999998740034688999999999998667------99954176555203
Q ss_pred ------CEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEE
Q ss_conf ------84999997142143889863202699755598899999997799999999889530358999579802578709
Q 005590 456 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 529 (689)
Q Consensus 456 ------~~l~lVmEy~~g~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~i 529 (689)
+++||||||++|+|.+++...+ .+++..++.+++||+.||.|||++||+||||||+|||++. ++.+
T Consensus 126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~--~~~~ 197 (398)
T 4b99_A 126 VPYGEFKSVYVVLDLMESDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCEL 197 (398)
T ss_dssp SCTTTCCCEEEEEECCSEEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TCCE
T ss_pred CCCCCCCEEEEEEECCCCCHHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCE
T ss_conf 5546688799998379998899998659------9999999999999999999999886767873713354278--8877
Q ss_pred EEEECCCCCCCCC-------CCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 9983688421368-------86422367654570323189-999125699999999999939999999839999999984
Q 005590 530 KIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 601 (689)
Q Consensus 530 kL~DFGls~~~~~-------~~~~~~gt~~y~APE~l~~~-~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~ 601 (689)
||+|||+++.... .....+||+.|||||++.+. .|+.++||||+||++|+|++|++||.+.+..+.+..|..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~ 277 (398)
T 4b99_A 198 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277 (398)
T ss_dssp EECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred EEEECCEEEECCCCCCCCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 87221434213467545666656625586764878762788899722211168999999978899898898999999997
Q ss_pred HCCCCCHHHHHHHHHHH--HHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 11998678873322354--4320011100000000100014775430112014791999999998130098999389999
Q 005590 602 MLGPIDLEMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 679 (689)
Q Consensus 602 ~~g~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~el 679 (689)
..+.++...+....... .++. .+... ....+.......++++++||.+||+.||++||||.|+
T Consensus 278 ~~g~p~~~~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 342 (398)
T 4b99_A 278 VLGTPSPAVIQAVGAERVRAYIQ-------------SLPPR--QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342 (398)
T ss_dssp HHCCCCGGGTC-----CHHHHHH-------------SSCCC--CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHH-------------CCCCC--CCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf 03899867763310023455553-------------07876--8878898587999999999999774995579189999
Q ss_pred HCCCCCCCC
Q ss_conf 809898889
Q 005590 680 LDHPWLQHP 688 (689)
Q Consensus 680 L~Hpwf~~~ 688 (689)
|+||||++-
T Consensus 343 L~Hp~f~~~ 351 (398)
T 4b99_A 343 LRHPFLAKY 351 (398)
T ss_dssp TTSGGGTTT
T ss_pred HCCHHHCCC
T ss_conf 659723868
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=413.88 Aligned_cols=253 Identities=22% Similarity=0.358 Sum_probs=217.5
Q ss_pred CCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECC---HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCE
Q ss_conf 7589999932588875399998878937999996054---1346759999999999601699998722587789984784
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 457 (689)
Q Consensus 381 ~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~---~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~ 457 (689)
++|++++.||+|+||+||+|+++.+|+.||||++... ......+.+|+.+++.++ ||||++++++|.+.+.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIV~~~~~~~~~~~ 97 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK------HPNIVQYRESFEENGS 97 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEETTE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCC------CCCCCCEEEEEEECCE
T ss_conf 2558847970277939999998899989999998658789799999999999998779------9898919999998999
Q ss_pred EEEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 9999971421-438898632026997555988999999977999999998895303589995798025787099983688
Q 005590 458 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 458 l~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFGl 536 (689)
+||||||+.| +|.+++...+. ..+++..++.|+.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~vKl~DFGl 171 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTVQLGDFGI 171 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT--TCCEEECSTTE
T ss_pred EEEEEECCCCCCHHHHHHHCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECC--CCCEEECCCCC
T ss_conf 9999948899839999997389----99978999999999999999999899151359789979878--99989764652
Q ss_pred CCCCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 4213688---6422367654570323189999125699999999999939999999839999999984119986788733
Q 005590 537 SCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~---~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
++..... ....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+++.++.....+
T Consensus 172 a~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~-------- 243 (350)
T 4b9d_A 172 ARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-------- 243 (350)
T ss_dssp ESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--------
T ss_pred CEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC--------
T ss_conf 144068854101457883603999987999895999999999999999787998996999999999808999--------
Q ss_pred HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 223544320011100000000100014775430112014791999999998130098999389999809898889
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~~ 688 (689)
.++ ...++.+++||.+||+.||++|||+.|+|+||||++.
T Consensus 244 --------------------------~~~---------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 244 --------------------------PVS---------LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp --------------------------CCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred --------------------------CCC---------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf --------------------------997---------5579999999999855896679089999639976167
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=412.62 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=216.5
Q ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCH-HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEE
Q ss_conf 375899999325888753999988789379999960541-3467599999999996016999987225877899847849
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..+|++.+.||+|+||+||+|+++.+|+.||||++.... .....+.+|+.+|+.++ ||||++++++|.+.+++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDEL 223 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC------CTTBCCEEEEEEETTEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC------CCCCCCEEEEEEECCEE
T ss_conf 684386169624818489999999999899999986255468999999999998579------98987168999989999
Q ss_pred EEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECCCC
Q ss_conf 999971421-4388986320269975559889999999779999999988953035899957980257870999836884
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFGls 537 (689)
|||||||.| +|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 224 ~iVmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~--~g~vKl~DFGla 294 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFC 294 (423)
T ss_dssp EEEEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT--TCCEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECC--CCCEEEECCCCC
T ss_conf 9999698998289887616-------9899999999999999999999889044657877789858--999898037265
Q ss_pred CCCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 213688---64223676545703231899991256999999999999399999998399999999841199867887332
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..|.....+
T Consensus 295 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------- 365 (423)
T 4fie_A 295 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------- 365 (423)
T ss_dssp EECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---------
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC---------
T ss_conf 47778876434666474727999977999996899999999999999787998986999999999727998---------
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 23544320011100000000100014775430112014791999999998130098999389999809898889
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~~ 688 (689)
.++. ....++.+++||.+||+.||++|||+.|+|+||||++.
T Consensus 366 -------------------------~~~~-------~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 366 -------------------------RLKN-------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp -------------------------CCSC-------TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -------------------------CCCC-------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf -------------------------8765-------01299999999999867895689099999609875689
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=411.62 Aligned_cols=253 Identities=24% Similarity=0.385 Sum_probs=216.0
Q ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCH-HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEE
Q ss_conf 375899999325888753999988789379999960541-3467599999999996016999987225877899847849
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 458 (689)
Q Consensus 380 ~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l 458 (689)
..+|++.++||+|+||+||+|+++.+|+.||||++.... .....+.+|+.+|+.++ ||||++++++|.+.+++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIV~l~~~~~~~~~~ 146 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDEL 146 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC------CTTBCCEEEEEEETTEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC------CCCCCCEEEEEEECCEE
T ss_conf 575387079602728299999998999899999985276568999999999998679------98999199999989999
Q ss_pred EEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECCCC
Q ss_conf 999971421-4388986320269975559889999999779999999988953035899957980257870999836884
Q 005590 459 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 537 (689)
Q Consensus 459 ~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFGls 537 (689)
||||||+.| +|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 147 ~ivmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~vKl~DFGla 217 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFC 217 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC--CCCEEEECCCCC
T ss_conf 9999698998089998718-------9899999999999999999999888355627889978879--998899027575
Q ss_pred CCCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 213688---64223676545703231899991256999999999999399999998399999999841199867887332
Q 005590 538 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 614 (689)
Q Consensus 538 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~~ 614 (689)
...... ....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+.....+
T Consensus 218 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------- 288 (346)
T 4fih_A 218 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------- 288 (346)
T ss_dssp EECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC---------
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC---------
T ss_conf 36678877534656275827999977999996899999999999999787998985999999999717999---------
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 23544320011100000000100014775430112014791999999998130098999389999809898889
Q 005590 615 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~~ 688 (689)
.++.. ...++.+++||.+||+.||++|||+.|+|+||||++.
T Consensus 289 -------------------------~~~~~-------~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 289 -------------------------RLKNL-------HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp -------------------------CCSCG-------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -------------------------CCCCC-------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf -------------------------88750-------2299999999999867995689099999609865689
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=406.86 Aligned_cols=250 Identities=29% Similarity=0.453 Sum_probs=215.6
Q ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCH----HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 375899999325888753999988789379999960541----3467599999999996016999987225877899847
Q 005590 380 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 455 (689)
Q Consensus 380 ~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~----~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~ 455 (689)
.++|++.+.||+|+||+||+|+++.+++.||+|++.+.. .....+.+|+++|+.+ .||||++++++|.+.
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL------DHPFFVKLYFTFQDD 104 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC------CCTTBCCEEEEEECS
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC------CCCCCCEEEEEEEEC
T ss_conf 52368988983164849999999999989999998888877978999999999999867------998989199999738
Q ss_pred CEEEEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEEC
Q ss_conf 849999971421-4388986320269975559889999999779999999988953035899957980257870999836
Q 005590 456 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 534 (689)
Q Consensus 456 ~~l~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DF 534 (689)
+++|+||||+.| +|.+++...+. +++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+||
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~~~------l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~--~g~vKl~DF 176 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDF 176 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TSCEEECCC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC--CCCEEEEEC
T ss_conf 989999964899899999987499------999999999999999999999887826878789969858--988899876
Q ss_pred CCCCCCCC-----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 88421368-----8642236765457032318999912569999999999993999999983999999998411998678
Q 005590 535 GSSCFQTD-----NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 609 (689)
Q Consensus 535 Gls~~~~~-----~~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e 609 (689)
|+|+.... .....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+++.+|...
T Consensus 177 Gla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------- 249 (311)
T 4aw0_A 177 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------- 249 (311)
T ss_dssp TTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-------
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-------
T ss_conf 8750257787765436755680307998976899996898998999999997498998997999999999719-------
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHH------HHCCC
Q ss_conf 873322354432001110000000010001477543011201479199999999813009899938999------98098
Q 005590 610 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE------ALDHP 683 (689)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~e------lL~Hp 683 (689)
.+.+|. ..++++++||.+||+.||++|+|+.| +++||
T Consensus 250 ----------------------------~~~~p~---------~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp 292 (311)
T 4aw0_A 250 ----------------------------EYDFPE---------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292 (311)
T ss_dssp ----------------------------CCCCCT---------TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSG
T ss_pred ----------------------------CCCCCC---------CCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCC
T ss_conf ----------------------------999996---------5699999999997628975780967975877987798
Q ss_pred CCCC
Q ss_conf 9888
Q 005590 684 WLQH 687 (689)
Q Consensus 684 wf~~ 687 (689)
||+.
T Consensus 293 ~F~~ 296 (311)
T 4aw0_A 293 FFES 296 (311)
T ss_dssp GGTT
T ss_pred CCCC
T ss_conf 7589
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=403.68 Aligned_cols=249 Identities=31% Similarity=0.526 Sum_probs=215.7
Q ss_pred CCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECC----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC
Q ss_conf 7589999932588875399998878937999996054----134675999999999960169999872258778998478
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 381 ~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~----~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
++|++.+.||+|+||+||+|+++.+++.||+|++.+. ......+.+|+.+++.++ ||||+++++++.+.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~~~~~~~ 86 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR------HPHIIKLYDVIKSKD 86 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC------CTTBCCEEEEEECSS
T ss_pred ECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCC------CCCCCEEEEEEEECC
T ss_conf 38689999821768199999999999899999983788678789999999999998779------989992999999899
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 49999971421438898632026997555988999999977999999998895303589995798025787099983688
Q 005590 457 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 536 (689)
Q Consensus 457 ~l~lVmEy~~g~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFGl 536 (689)
++|+||||++|+|.+++..... +++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 87 ~~~ivmEy~~g~L~~~l~~~~~------l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~--~~~vkl~DFGl 158 (275)
T 3hyh_A 87 EIIMVIEYAGNELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGL 158 (275)
T ss_dssp EEEEEEECCCEEHHHHHHHSCS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT--TCCEEECCSSC
T ss_pred EEEEEEECCCCCHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC--CCCEEEEECCC
T ss_conf 8999992789978999987499------999999999999999999999889306668758768879--99899945477
Q ss_pred CCCCCCC--CCCCCCCCCCCCHHHHCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 4213688--642236765457032318999-9125699999999999939999999839999999984119986788733
Q 005590 537 SCFQTDN--LCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 537 s~~~~~~--~~~~~gt~~y~APE~l~~~~~-s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
|+..... ....+||+.|||||++.+..| +.++||||+||++|+|++|++||.+.+....+..+...
T Consensus 159 a~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~----------- 227 (275)
T 3hyh_A 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG----------- 227 (275)
T ss_dssp C---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------
T ss_pred CEECCCCCCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-----------
T ss_conf 726678874677028935277455068988898365687899999999887998998999999999749-----------
Q ss_pred HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 22354432001110000000010001477543011201479199999999813009899938999980989888
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~ 687 (689)
...+|. ..++.+++||.+||+.||++|||+.|+|+||||+.
T Consensus 228 ------------------------~~~~p~---------~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 228 ------------------------VYTLPK---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp ------------------------CCCCCT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred ------------------------CCCCCC---------CCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf ------------------------999987---------79999999999986589668919999971920065
No 8
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=402.00 Aligned_cols=260 Identities=25% Similarity=0.362 Sum_probs=221.5
Q ss_pred EECCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCH-HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC
Q ss_conf 32375899999325888753999988789379999960541-34675999999999960169999872258778998478
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 456 (689)
Q Consensus 378 ~i~~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~-~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~ 456 (689)
.+.++|++.+.||+|+||.||+|+++.+|+.||+|++.... .....+.+|+.+|+.++ ||||++++++|.+..
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~------hpnIv~l~~~~~~~~ 227 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------HPTLVNLHDAFEDDN 227 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTC------CTTBCCEEEEEECSS
T ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC------CCCCCEEEEEEEECC
T ss_conf 68536189889961648499999998899899999991524205999999999998689------989894999999899
Q ss_pred EEEEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEECC
Q ss_conf 49999971421-43889863202699755598899999997799999999889530358999579802578709998368
Q 005590 457 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 535 (689)
Q Consensus 457 ~l~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~DFG 535 (689)
++++||||+.| +|.+++.... ..+++..++.+++||+.||.|||+++|+||||||+|||++....+.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEEECCCCCHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECC
T ss_conf 8899986069995999999867-----99999999999999999999999889230568765512147888978994066
Q ss_pred CCCCCCCC--CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 84213688--6422367654570323189999125699999999999939999999839999999984119986788733
Q 005590 536 SSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 613 (689)
Q Consensus 536 ls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~~~~ 613 (689)
+++..... ....+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..|......++..
T Consensus 303 ~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~---- 378 (573)
T 3uto_A 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS---- 378 (573)
T ss_dssp SCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSG----
T ss_pred CEEECCCCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC----
T ss_conf 3068569982323477945149999689998969999999999999997879979869999999998489998953----
Q ss_pred HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 223544320011100000000100014775430112014791999999998130098999389999809898889
Q 005590 614 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 688 (689)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~~ 688 (689)
.....++.+++||++||+.||++|||+.|+|+||||+..
T Consensus 379 ------------------------------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~ 417 (573)
T 3uto_A 379 ------------------------------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417 (573)
T ss_dssp ------------------------------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred ------------------------------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf ------------------------------------246899999999998864895689299999539574879
No 9
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=1.00 E-value=1 Score=401.07 Aligned_cols=294 Identities=21% Similarity=0.338 Sum_probs=221.9
Q ss_pred EECCCEEEEEEECCCCCCCEEEEEEC---CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
Q ss_conf 32375899999325888753999988---789379999960541346759999999999601699998722587789984
Q 005590 378 VIAGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 454 (689)
Q Consensus 378 ~i~~~Y~i~~~LG~G~fG~Vy~a~d~---~tg~~vAIKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~ 454 (689)
.+.++|++.++||+|+||+||+|+++ .+++.||+|++..... ..+..+|+++++.+. .||||++++++|..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~E~~~l~~~~-----~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-PIRIAAELQCLTVAG-----GQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-HHHHHHHHHHHHHTC-----SBTTBCCCSEEEEE
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCC-HHHHHHHHHHHHHHC-----CCCCCCEEEEEEEE
T ss_conf 756827998998226181999999716689897899999756667-999999999999715-----99987669999998
Q ss_pred CCEEEEEEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCEEEEEE
Q ss_conf 7849999971421-438898632026997555988999999977999999998895303589995798025787099983
Q 005590 455 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 533 (689)
Q Consensus 455 ~~~l~lVmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~~ikL~D 533 (689)
.+++|+||||+.| +|.+++. .+++..++.+++||+.||.|||++||+||||||+|||++. +.+.+||+|
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~-~~~~~kl~D 161 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR-RLKKYALVD 161 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-TTTEEEECC
T ss_pred CCEEEEEEECCCCCCHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEEC-CCCEEEECC
T ss_conf 999999993788521999872---------8999999999999999999999789175758779968858-999189776
Q ss_pred CCCCCCCCCC-------------------------------CCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHH
Q ss_conf 6884213688-------------------------------64223676545703231899-991256999999999999
Q 005590 534 LGSSCFQTDN-------------------------------LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELW 581 (689)
Q Consensus 534 FGls~~~~~~-------------------------------~~~~~gt~~y~APE~l~~~~-~s~~sDIwSLGviL~ell 581 (689)
||+|+...+. ....+||+.|+|||++.+.. |+.++||||+||++|+|+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 77774367765321222333332233444544322356541146556733269899808999898210454299999999
Q ss_pred HCCCCC-CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH---HHHHCCCCCCCCCCCC-------CHHHHH
Q ss_conf 399999-99839999999984119986788733223544320011100---0000001000147754-------301120
Q 005590 582 TGEVLF-PNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLY---YINEETNQLEYIIPEE-------SSLEHH 650 (689)
Q Consensus 582 tG~~PF-~~~~~~~~l~~i~~~~g~~~~e~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~-------~sl~~~ 650 (689)
+|+.|| .+.+..+.+..|...+|.++...+..............+.. .............|.. ......
T Consensus 242 ~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (361)
T 4f9c_A 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEG 321 (361)
T ss_dssp HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------
T ss_pred HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78899899998799999999840896200012220222223345762025677776402444464322111123344323
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 1479199999999813009899938999980989888
Q 005590 651 LQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 687 (689)
Q Consensus 651 ~~~~~~~l~dLI~~mL~~dP~kRpTa~elL~Hpwf~~ 687 (689)
....+++++|||++||+.||++|+||.|+|+||||++
T Consensus 322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 4459999999999877699357908999966923078
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=394.59 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=205.4
Q ss_pred CCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEE
Q ss_conf 75899999325888753999988789379999960541346759999999999601699998722587789984784999
Q 005590 381 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 460 (689)
Q Consensus 381 ~~Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAIKii~~~~~~~~~~~~Ei~iL~~l~~~~~~~h~~Iv~l~~~f~~~~~l~l 460 (689)
+.|++.++||+|+||+||+|+++.+|+.||||+++.+.. ..+|+.+++.+ .||||++++++|.+.+++||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l------~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL------SSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC------CCTTBCCEEEEEEETTEEEE
T ss_pred HHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH----HHHHHHHHHHC------CCCCCCCEEEEEEECCEEEE
T ss_conf 351768685138780999999889998999999788886----99999999857------99899939999998999999
Q ss_pred EEECCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCC-EEEEEECCCCC
Q ss_conf 9971421-438898632026997555988999999977999999998895303589995798025787-09998368842
Q 005590 461 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGSSC 538 (689)
Q Consensus 461 VmEy~~g-~L~~~~~~~~~~~~~~~ls~~~i~~i~~QIl~aL~yLH~~gIvHrDIKp~NILi~~~~~~-~ikL~DFGls~ 538 (689)
||||+.| +|.+++..... +++..++.++.||+.||.|||+++|+||||||+|||++. ++ .+||+|||+++
T Consensus 128 vmEy~~gg~L~~~l~~~~~------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMGC------LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDFGHAL 199 (336)
T ss_dssp EECCCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT--TSCCEEECCCTTCE
T ss_pred EEECCCCCCHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEEC--CCCEEEEEECCCCE
T ss_conf 9966599869999987699------999999999999999999999889042616778879958--99979996278776
Q ss_pred CCCCC--------CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf 13688--------6422367654570323189999125699999999999939999999839999999984119986788
Q 005590 539 FQTDN--------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 610 (689)
Q Consensus 539 ~~~~~--------~~~~~gt~~y~APE~l~~~~~s~~sDIwSLGviL~elltG~~PF~~~~~~~~l~~i~~~~g~~~~e~ 610 (689)
..... ....+||+.|||||++.+..|+.++||||+||++|+|++|++||.+.+...++.+|.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~------ 273 (336)
T 4g3f_A 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP------ 273 (336)
T ss_dssp EC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC------
T ss_pred ECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC------
T ss_conf 85678765402217854558020089998899989089999999999999978699899899999999980899------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHH-----------
Q ss_conf 733223544320011100000000100014775430112014791999999998130098999389999-----------
Q 005590 611 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA----------- 679 (689)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~sl~~~~~~~~~~l~dLI~~mL~~dP~kRpTa~el----------- 679 (689)
.........++.+.+||.+||+.||++|||+.|+
T Consensus 274 -----------------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 274 -----------------------------------PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -----------------------------------GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----------------------------------CCHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf -----------------------------------800258667999999999976289768959999999999997544
Q ss_pred --HCCCCCCC
Q ss_conf --80989888
Q 005590 680 --LDHPWLQH 687 (689)
Q Consensus 680 --L~Hpwf~~ 687 (689)
|+|||++.
T Consensus 319 ~~l~hPw~~~ 328 (336)
T 4g3f_A 319 GGLKSPWKGE 328 (336)
T ss_dssp TSSCSCSSSS
T ss_pred HHCCCCCCCC
T ss_conf 3216987677
Done!