BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005593
(689 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P44439|PCNB_HAEIN Probable poly(A) polymerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=pcnB PE=3 SV=1
Length = 452
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 18/244 (7%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRS-EIIGRRFPIC 133
V++ L+ QGF+AY+VGGC+RDLLL + PKDFDV T A +QI+ F R ++GRRF +
Sbjct: 39 VVEKLQRQGFEAYIVGGCIRDLLLGKKPKDFDVATNARPEQIQNIFQRQCRLVGRRFRLA 98
Query: 134 RVHIKGSVIEVSSFETVAKHGEGK---------ETVLLSQIPYGCDEIDLVRWRNSIHRD 184
+ +IEV++F A H + + E +LL YG E D R RD
Sbjct: 99 HIMFGRDIIEVATFR--ANHSDARNENQAKQSNEGMLLRDNVYGTIEQDAAR------RD 150
Query: 185 FTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLS 244
FT+N+L+++P N + DY GI DL+ KLR + + ED R+LR +R A+L +
Sbjct: 151 FTVNALYYNPQDNTLRDYFEGIKDLKAGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLDMF 210
Query: 245 FCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAY 304
K + + L+ ++ + +R+ E +L G + LLR+Y L + L P +AY
Sbjct: 211 LEKPSEQPIRELAPLLKNIPPARLFDESLKLLQAGQGVKTYRLLRQYGLFEQLFPALSAY 270
Query: 305 LDQQ 308
++
Sbjct: 271 FTEK 274
>sp|Q8Z9C3|PCNB_SALTI Poly(A) polymerase OS=Salmonella typhi GN=pcnB PE=3 SV=2
Length = 465
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 35 MCREMCS---DSFNQEVDVSNWKTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGG 91
CR++ S Q V + + I+R I + + VL L G++AYLVGG
Sbjct: 8 FCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGG 67
Query: 92 CVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVA 151
VRDLLL + PKDFDV T A Q+R+ F ++GRRF + V +IEV++F
Sbjct: 68 GVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFR--- 124
Query: 152 KHGEGKET-----------VLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIY 200
H EG E+ +LL +G E D R RDFTINSL++ +
Sbjct: 125 GHNEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVR 178
Query: 201 DYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTAMHSLSSSI 260
DY G+ DL+ +R + + ED R+LR +R AA+L + + + L++ +
Sbjct: 179 DYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLL 238
Query: 261 ERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQA 309
+ +R+ E +L G + LR Y+L + L P Y +
Sbjct: 239 NDIPPARLFEESLKLLQAGNGFETYQQLREYHLFQPLFPTITRYFTENG 287
>sp|Q8ZRQ8|PCNB_SALTY Poly(A) polymerase OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=pcnB PE=3 SV=2
Length = 465
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 35 MCREMCS---DSFNQEVDVSNWKTVDSRNLGITRAMIPQPSWVVLKILKSQGFQAYLVGG 91
CR++ S Q V + + I+R I + + VL L G++AYLVGG
Sbjct: 8 FCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGG 67
Query: 92 CVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVSSFETVA 151
VRDLLL + PKDFDV T A Q+R+ F ++GRRF + V +IEV++F
Sbjct: 68 GVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFR--- 124
Query: 152 KHGEGKET-----------VLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIY 200
H EG E+ +LL +G E D R RDFTINSL++ +
Sbjct: 125 GHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQR------RDFTINSLYYSVADFTVR 178
Query: 201 DYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTAMHSLSSSI 260
DY G+ DL+ +R + + ED R+LR +R AA+L + + + L++ +
Sbjct: 179 DYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMHISPETAEPIPRLATLL 238
Query: 261 ERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQA 309
+ +R+ E +L G + LR Y+L + L P Y +
Sbjct: 239 NDIPPARLFEESLKLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENG 287
>sp|P0ABF1|PCNB_ECOLI Poly(A) polymerase OS=Escherichia coli (strain K12) GN=pcnB PE=1
SV=2
Length = 465
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 62 GITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFH 121
I+R I + + V+ L G++A+LVGG VRDLLL + PKDFDV T A +Q+R+ F
Sbjct: 38 AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFR 97
Query: 122 RSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGE-----------GKETVLLSQIPYGCD 170
++GRRF + V +IEV++F H E G+ +LL +G
Sbjct: 98 NCRLVGRRFRLAHVMFGPEIIEVATFR---GHHEGNVSDRTTSQRGQNGMLLRDNIFGSI 154
Query: 171 EIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCAR 230
E D R RDFTINSL++ + DY G+ DL+ +R + + ED R
Sbjct: 155 EEDAQR------RDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR 208
Query: 231 ILRGLRIAARLGLSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRR 290
+LR +R AA+LG+ + + L++ + + +R+ E +L G + LL
Sbjct: 209 MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE 268
Query: 291 YNLLKILLPFHAAYLDQQAGKITAENPM--MLMRLFFNLDKLVSCD---RPA---DYTLW 342
Y+L + L P Y + ++PM ++ ++ N D + D PA W
Sbjct: 269 YHLFQPLFPTITRYFTE-----NGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFW 323
Query: 343 VGLLSFHQALVSDP----QDAFVV 362
LL Q + + DAF +
Sbjct: 324 YPLLETAQKIAQESGLTYHDAFAL 347
>sp|P0ABF2|PCNB_ECOL6 Poly(A) polymerase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=pcnB PE=3 SV=2
Length = 465
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 62 GITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFH 121
I+R I + + V+ L G++A+LVGG VRDLLL + PKDFDV T A +Q+R+ F
Sbjct: 38 AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFR 97
Query: 122 RSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGE-----------GKETVLLSQIPYGCD 170
++GRRF + V +IEV++F H E G+ +LL +G
Sbjct: 98 NCRLVGRRFRLAHVMFGPEIIEVATFR---GHHEGNVSDRTTSQRGQNGMLLRDNIFGSI 154
Query: 171 EIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCAR 230
E D R RDFTINSL++ + DY G+ DL+ +R + + ED R
Sbjct: 155 EEDAQR------RDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR 208
Query: 231 ILRGLRIAARLGLSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRR 290
+LR +R AA+LG+ + + L++ + + +R+ E +L G + LL
Sbjct: 209 MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE 268
Query: 291 YNLLKILLPFHAAYLDQQAGKITAENPM--MLMRLFFNLDKLVSCD---RPA---DYTLW 342
Y+L + L P Y + ++PM ++ ++ N D + D PA W
Sbjct: 269 YHLFQPLFPTITRYFTE-----NGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFW 323
Query: 343 VGLLSFHQALVSDP----QDAFVV 362
LL Q + + DAF +
Sbjct: 324 YPLLETAQKIAQESGLTYHDAFAL 347
>sp|P0ABF3|PCNB_ECO57 Poly(A) polymerase OS=Escherichia coli O157:H7 GN=pcnB PE=3 SV=2
Length = 465
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 62 GITRAMIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFH 121
I+R I + + V+ L G++A+LVGG VRDLLL + PKDFDV T A +Q+R+ F
Sbjct: 38 AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFR 97
Query: 122 RSEIIGRRFPICRVHIKGSVIEVSSFETVAKHGE-----------GKETVLLSQIPYGCD 170
++GRRF + V +IEV++F H E G+ +LL +G
Sbjct: 98 NCRLVGRRFRLAHVMFGPEIIEVATFR---GHHEGNVSDRTTSQRGQNGMLLRDNIFGSI 154
Query: 171 EIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCAR 230
E D R RDFTINSL++ + DY G+ DL+ +R + + ED R
Sbjct: 155 EEDAQR------RDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR 208
Query: 231 ILRGLRIAARLGLSFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRR 290
+LR +R AA+LG+ + + L++ + + +R+ E +L G + LL
Sbjct: 209 MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE 268
Query: 291 YNLLKILLPFHAAYLDQQAGKITAENPM--MLMRLFFNLDKLVSCD---RPA---DYTLW 342
Y+L + L P Y + ++PM ++ ++ N D + D PA W
Sbjct: 269 YHLFQPLFPTITRYFTE-----NGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFW 323
Query: 343 VGLLSFHQALVSDP----QDAFVV 362
LL Q + + DAF +
Sbjct: 324 YPLLETAQKIAQESGLTYHDAFAL 347
>sp|Q4L6G1|CCA_STAHJ CCA-adding enzyme OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=cca PE=3 SV=1
Length = 400
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 34/273 (12%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD L+ R D D+ T+A +I F ++ IGR
Sbjct: 12 ILEKIEQHGFEAYFVGGSVRDYLMNRHIHDIDITTSATPDEIESIFEKTIPIGREHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTINSLFFD 193
V +G+ EV++F A++ + + S++ + D + DL R RDFTIN++ D
Sbjct: 72 VVYQGTNYEVTTFRAEAEYVDHRRP---SEVYFVRDLKEDLQR------RDFTINAIAMD 122
Query: 194 PFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTAM 253
N IYDY G L ++T+ A F ED RILRGLR ++L + D AM
Sbjct: 123 KNFN-IYDYFEGDVALNQHIIKTVGDAKERFKEDALRILRGLRFQSQLNFTIEGDTFEAM 181
Query: 254 HSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKIT 313
+ +E L RI++EL ++ S L N +PF + LD + K+
Sbjct: 182 KHQIADVEHLSIERIVVELKKLIKGQNVSQSYLNLIDLNFFN-YVPFFRS-LDMKQTKVN 239
Query: 314 AENPMMLMRLFFNLDKLVSCDRPADYTLWVGLL 346
+ P + LW+ +L
Sbjct: 240 S---------------------PISFELWIAIL 251
>sp|Q8CP70|CCA_STAES CCA-adding enzyme OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=cca PE=3 SV=1
Length = 400
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 49/290 (16%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+LK ++++GF+AY VGG VRD +++R D D+ T+A +I F ++ +G+
Sbjct: 12 ILKKIQNKGFKAYFVGGSVRDYIMQRPIHDVDITTSATPDEIESIFDKTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V + E+++F + ++ + + E+ VR +++ RDFT+N++
Sbjct: 72 VVFQNDNYEITTFRSEDEYIDHRRP----------SEVYFVRDLYQDVQRRDFTMNAIAM 121
Query: 193 DPFLN-KIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDT 251
D LN ++YDY NG D+ +RT+ F+ED RI+RGLR ++L D
Sbjct: 122 D--LNYRLYDYFNGQQDINNRVIRTVGVPSERFSEDALRIIRGLRFQSQLNFQIDSDTLH 179
Query: 252 AMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRR---YNLLKILLPFHAAYLDQQ 308
AM S S I+ L R+++EL ++ + S +++ +N + F ++L
Sbjct: 180 AMSSQISDIQYLSVERVVVELKKLIMGNNVKQSFEVMQNMKAFNYIPFFKSFEMSHL--- 236
Query: 309 AGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQD 358
D P + LW+ +L +V P+D
Sbjct: 237 -----------------------HIDEPITFELWIAIL-----IVQQPKD 258
>sp|Q5HP86|CCA_STAEQ CCA-adding enzyme OS=Staphylococcus epidermidis (strain ATCC 35984
/ RP62A) GN=cca PE=3 SV=1
Length = 400
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 49/290 (16%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+LK ++++GF+AY VGG VRD +++R D D+ T+A +I F ++ +G+
Sbjct: 12 ILKKIQNKGFKAYFVGGSVRDYIMQRPIHDVDITTSATPDEIESIFDKTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V + E+++F + ++ + + E+ VR +++ RDFT+N++
Sbjct: 72 VVFQNDNYEITTFRSEDEYIDHRRP----------SEVYFVRDLYQDVQRRDFTMNAIAM 121
Query: 193 DPFLN-KIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDT 251
D LN ++YDY NG D+ +RT+ F+ED RI+RGLR ++L D
Sbjct: 122 D--LNYRLYDYFNGQQDINNRVIRTVGVPSERFSEDALRIIRGLRFQSQLNFQIDSDTLH 179
Query: 252 AMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRR---YNLLKILLPFHAAYLDQQ 308
AM S S I+ L R+++EL ++ + S +++ +N + F ++L
Sbjct: 180 AMSSQISDIQYLSVERVVVELKKLIMGNNVKQSFEVMQNMKAFNYIPFFKSFEMSHL--- 236
Query: 309 AGKITAENPMMLMRLFFNLDKLVSCDRPADYTLWVGLLSFHQALVSDPQD 358
D P + LW+ +L +V P+D
Sbjct: 237 -----------------------HIDEPITFELWIAIL-----IVQQPKD 258
>sp|Q49XR3|CCA_STAS1 CCA-adding enzyme OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=cca
PE=3 SV=1
Length = 399
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 19/247 (7%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ L++ FQAY VGG VRD L+ R D D+ T+A +I F ++ IGR
Sbjct: 12 ILEKLQAHHFQAYFVGGSVRDYLMNRPIHDIDITTSATPDEIETVFDKTIPIGREHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V KG EV++F + + + + +E+ VR + + RDFT+N++
Sbjct: 72 VIYKGEQYEVTTFRSEGDYDDHRR----------PNEVFFVRNLYDDVQRRDFTMNAIAM 121
Query: 193 DPFLN-KIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDT 251
D +N +I+DY G D++ +RT+ F ED RI+RGLR ++ G + T
Sbjct: 122 D--INYQIFDYFEGQQDIKHQLIRTVGNPDERFDEDALRIIRGLRFQSQFGFHLEEATFT 179
Query: 252 AMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGK 311
AM + + I+ L RI++EL + + S L+ + K +PF Y K
Sbjct: 180 AMLNHIADIKYLAIERIVVELKKLTNGDFVSKSFNNLKHFMAFK-YIPFFKHY---DITK 235
Query: 312 ITAENPM 318
T N M
Sbjct: 236 FTLRNAM 242
>sp|B9DNX1|CCA_STACT CCA-adding enzyme OS=Staphylococcus carnosus (strain TM300) GN=cca
PE=3 SV=1
Length = 400
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ G++AY VGG VRD L+ R D D+ T+A+ +I F + IG+
Sbjct: 12 ILQEIQDNGYEAYYVGGAVRDYLMDRPIHDIDITTSASPDEIEGIFTNTIPIGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F ++ + + E+ VR +++ RDFTIN++
Sbjct: 72 VVYNHENYEVTTFRAEGEYEDHRRP----------SEVIFVRDLYKDVERRDFTINAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D N I DY NG SD++ ++T+ Y F ED RILRGLR ++L D A
Sbjct: 122 DNQFN-IKDYFNGYSDIQNKLIKTVGNPYERFNEDALRILRGLRFKSQLRFEIDSDTYKA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGKI 312
M + E L RI++EL +L A LL K +PF ++ I
Sbjct: 181 MQEKIADTEYLSIERIIIELRKLLEGTDASIVYPLLNELQFFK-YVPFFKSF---NTSAI 236
Query: 313 TAENPMML 320
++P+ L
Sbjct: 237 EIKDPIKL 244
>sp|Q834S5|CCA_ENTFA CCA-adding enzyme OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=cca PE=3 SV=1
Length = 406
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
V++ + +QGF+AY VGG VRD LL + D D+ T+A ++I++ F R+ +G
Sbjct: 16 VIREINAQGFEAYFVGGSVRDALLNKPIHDVDIATSAYPEEIKQIFKRTVDVGIEHGTVL 75
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRW--RNSIHRDFTINSLFF 192
V ++ EV++F T + + + + DE+ VR + RDFTIN+L
Sbjct: 76 VLMEDQQYEVTTFRTESTYQDFRRP----------DEVTFVRSLKEDLKRRDFTINALAL 125
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D +I D +GI DL +R + + F ED R++RGLR A++L + A
Sbjct: 126 DS-TGEIIDLFDGIEDLTNQTIRAVGNPHERFHEDALRMMRGLRFASQLDFKIEEKTLAA 184
Query: 253 MHSLSSSIERLDKSRIMMELNYML 276
+ +E++ RI +E ML
Sbjct: 185 IAEFHPLLEKISVERITIEFVKML 208
>sp|B1MYC1|CCA_LEUCK CCA-adding enzyme OS=Leuconostoc citreum (strain KM20) GN=cca PE=3
SV=1
Length = 403
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 17/237 (7%)
Query: 67 MIPQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEII 126
M QP +L+ ++S GF+AY VGG VRD+LL + D D+ T+A ++I+ F ++
Sbjct: 11 MQAQP---ILEHIESAGFEAYFVGGAVRDMLLNKPIHDVDIATSAFPEEIKALFTKTVDT 67
Query: 127 GRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRD 184
G + V G E+++F T + + + + D++ VR + RD
Sbjct: 68 GIQHGTVMVLDHGDGYEITTFRTESTYTDFRRP----------DKVTFVRSLAEDLKRRD 117
Query: 185 FTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLS 244
FTIN++ I D +G++D+ ++R + A + F ED RI+R LR +A+LG
Sbjct: 118 FTINAIAMTKD-GDIIDLFDGLTDMAQKRIRAVGDAEVRFNEDALRIMRALRFSAQLGFD 176
Query: 245 FCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFH 301
A+ + ++E++ RI +E +L A +S+ + +L++ LP H
Sbjct: 177 IAPHTKAALKQIGRNLEKIAVERIRVEFEKLLMGQYASNSLSVAIEADLIR-YLPGH 232
>sp|Q9KC89|CCA_BACHD CCA-adding enzyme OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=cca PE=3 SV=1
Length = 375
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 79 LKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICRVHIK 138
L+ GF+AY+VGG VRD + R PKD DV+T+A+ ++IR + + I R+F VH++
Sbjct: 15 LRDHGFEAYIVGGAVRDYHIGRKPKDVDVVTSASPEEIRTLYPHAFQINRQFQTLTVHLQ 74
Query: 139 GSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNK 198
IEVS+ G E DL RDFTIN++
Sbjct: 75 KVAIEVSTLRG------------------GSIEDDLCS------RDFTINAMAL-AMNGD 109
Query: 199 IYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTAMHSLSS 258
I D G +DL +R+ P F ED R+LR R A+ LG + K A+ S
Sbjct: 110 IIDPTGGKTDLENGVIRSFHPEA-RFKEDPLRMLRAPRFASELGFTVAKGTAEAIKGSCS 168
Query: 259 SIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKIL 297
+ + R+ EL ++ S CLL L +
Sbjct: 169 LLADVAVERVEKELTQLMIGTHRSSGWCLLHETGLYPFI 207
>sp|Q8EQD6|CCA_OCEIH CCA-adding enzyme OS=Oceanobacillus iheyensis (strain DSM 14371 /
JCM 11309 / KCTC 3954 / HTE831) GN=cca PE=3 SV=1
Length = 400
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 67 MIPQP---SWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRS 123
MI +P + +L L S G++ Y VGGCVRDLLL++ D D+ T+A ++ F +
Sbjct: 1 MISEPFLKASPILTTLISNGYEGYFVGGCVRDLLLQKDIHDIDIATSATPNEVMHLFKKV 60
Query: 124 EIIGRRFPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHR 183
+G V G EV+++ + GE + + + + + + +R R
Sbjct: 61 IPVGIEHGTVIVRHGGESYEVTTYR---QDGEYTDHRRPNDVRFVTNLAEDLR-----RR 112
Query: 184 DFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGL 243
DFTIN+L D +I D +G DL+ +RT+ A FTED RILR +R +++LG
Sbjct: 113 DFTINALAMDTS-GQITDLFHGQDDLKKKLIRTVGNAEERFTEDALRILRAVRFSSQLGC 171
Query: 244 SFCKDIDTAMHSLSSSIERLDKSRIMMELNYML 276
+ +D AM + I+ L RI +EL +
Sbjct: 172 TIQEDTLEAMFVIRKQIQHLAVERITIELTKLF 204
>sp|Q8DUL8|CCA_STRMU CCA-adding enzyme OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=cca PE=3 SV=1
Length = 401
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K+ GF+AY VGG VRD+LL D D+ +++ ++ ++ F R+ IG
Sbjct: 11 QEALPVLEKIKAAGFEAYFVGGSVRDVLLGHPIHDVDIASSSYPEETKKIFPRTVDIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G EV++F T + + + SQ+ + E DL R RDFTIN
Sbjct: 71 HGTVLVLENGHDYEVTTFRTEDLYVDYRRP---SQVSFVRSLEEDLKR------RDFTIN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+ D N I D NG+ DL LR + A F ED RI+RGLR AA+L K
Sbjct: 122 AFALDEKAN-IIDKFNGLVDLEQKILRAVGNAAERFNEDALRIMRGLRFAAQLNFDIEKK 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSI-CLL--RRYNLLKIL 297
AM + +E++ R +E + +L I CL+ + Y+ L +L
Sbjct: 181 TFIAMREHAPLLEKISVERSFIEFDKLLRAPYWRKGINCLIASQAYDYLPLL 232
>sp|A3CMU4|CCA_STRSV CCA-adding enzyme OS=Streptococcus sanguinis (strain SK36) GN=cca
PE=3 SV=1
Length = 399
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K+ GF+AY VGG VRD LL+R D D+ +++ ++ +R F R+ +G
Sbjct: 11 QEALPVLEKIKAAGFEAYFVGGSVRDALLQRPIHDVDIASSSYPEETKRIFDRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFTIN+
Sbjct: 71 HGTVLVLENNREYEVTTFRTEDVYVDYRRPSKVSFVR--SLEEDLKR------RDFTINA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
L D ++ D G+ DL LR + A F ED RI+RG R A L +D
Sbjct: 123 LALDEN-GQVIDLFQGLDDLENQILRAVGTAAERFNEDALRIMRGFRFQAALDFDLEQDT 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM + +E++ RI +E + +L
Sbjct: 182 FAAMKDCAPLLEKISVERIFIEFDKLL 208
>sp|A2RJT1|CCA_LACLM CCA-adding enzyme OS=Lactococcus lactis subsp. cremoris (strain
MG1363) GN=cca PE=3 SV=1
Length = 402
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 19/238 (7%)
Query: 69 PQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGR 128
QP VL+ + GF+AY VGG VRD+LL R D D+ T+A ++I+ F + +G
Sbjct: 13 AQP---VLEKISEHGFEAYFVGGSVRDVLLGREIHDVDIATSAYPEEIKDIFPYTIDVGI 69
Query: 129 RFPICRVHIKGSV---IEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR-WRNSI-HR 183
V S E+++F T +K+ + + D +D VR R + R
Sbjct: 70 EHGTVLVLAGKSEAEHYEITTFRTESKYTDYRRP----------DHVDFVRDLREDLKRR 119
Query: 184 DFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGL 243
DFT+N+ D F +I D +G++DL+ +L + A F ED RI+R +R A+ L
Sbjct: 120 DFTVNAFACD-FEGQIIDLFDGLTDLKERRLTAVGSALERFNEDALRIMRAMRFASTLDF 178
Query: 244 SFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFH 301
+ +AM S +E++ RI +EL+ +L + + LL K L F
Sbjct: 179 KIEEKTFSAMRERSHLLEKISVERIFIELDKLLLGSEWRNGLTLLIESEAWKYLPDFQ 236
>sp|Q02Y22|CCA_LACLS CCA-adding enzyme OS=Lactococcus lactis subsp. cremoris (strain
SK11) GN=cca PE=3 SV=1
Length = 402
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 19/238 (7%)
Query: 69 PQPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGR 128
QP VL+ + GF+AY VGG VRD+LL R D D+ T+A ++I+ F + +G
Sbjct: 13 AQP---VLEKISEHGFEAYFVGGSVRDVLLGREIHDVDIATSAYPEEIKDIFPYTIDVGI 69
Query: 129 RFPICRVHIKGSV---IEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR-WRNSI-HR 183
V S E+++F T +K+ + + D +D VR R + R
Sbjct: 70 EHGTVLVLAGKSEAEHYEITTFRTESKYTDYRRP----------DHVDFVRDLREDLKRR 119
Query: 184 DFTINSLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGL 243
DFT+N+ D F +I D +G++DL+ +L + A F ED RI+R +R A+ L
Sbjct: 120 DFTVNAFACD-FEGQIIDLFDGLTDLKERRLTAVGSALERFNEDALRIMRAMRFASTLDF 178
Query: 244 SFCKDIDTAMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFH 301
+ +AM S +E++ RI +EL+ +L + + LL K L F
Sbjct: 179 KIEEKTFSAMRERSHLLEKISVERIFIELDKLLLGSEWRNGLTLLIESEAWKYLPDFQ 236
>sp|B2IR74|CCA_STRPS CCA-adding enzyme OS=Streptococcus pneumoniae (strain CGSP14)
GN=cca PE=3 SV=1
Length = 399
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K GF+AY VGG VRD LL D D+ T++ ++ ++ F R+ IG
Sbjct: 11 QKALPVLEKIKEAGFEAYFVGGSVRDALLHSPIHDVDIATSSYPEETKQIFPRTADIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFV--RSLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
D +I D +G+ DL LR + A F ED RI+RG R A LG + +
Sbjct: 123 FALDE-TGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPET 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM +L+ +E++ R +E + +L
Sbjct: 182 FKAMKTLTPLLEKISVERTFVEFDKLL 208
>sp|Q8CWQ3|CCA_STRR6 CCA-adding enzyme OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=cca PE=3 SV=1
Length = 399
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K GF+AY VGG VRD LL D D+ T++ ++ ++ F R+ IG
Sbjct: 11 QKALPVLEKIKEAGFEAYFVGGSVRDALLHSPIHDVDIATSSYPEETKQIFPRTADIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFV--RSLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
D +I D +G+ DL LR + A F ED RI+RG R A LG + +
Sbjct: 123 FALDE-TGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPET 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM +L+ +E++ R +E + +L
Sbjct: 182 FKAMKTLTPLLEKISVERTFVEFDKLL 208
>sp|Q97PP9|CCA_STRPN CCA-adding enzyme OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=cca PE=3 SV=2
Length = 399
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K GF+AY VGG VRD LL D D+ T++ ++ ++ F R+ IG
Sbjct: 11 QKALPVLEKIKEAGFEAYFVGGSVRDALLHSPIHDVDIATSSYPEETKQIFPRTADIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFV--RSLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
D +I D +G+ DL LR + A F ED RI+RG R A LG + +
Sbjct: 123 FALDE-TGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPET 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM +L+ +E++ R +E + +L
Sbjct: 182 FKAMKTLTPLLEKISVERTFVEFDKLL 208
>sp|B5E6J9|CCA_STRP4 CCA-adding enzyme OS=Streptococcus pneumoniae serotype 19F (strain
G54) GN=cca PE=3 SV=1
Length = 399
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K GF+AY VGG VRD LL D D+ T++ ++ ++ F R+ IG
Sbjct: 11 QKALPVLEKIKEAGFEAYFVGGSVRDALLHNPIHDVDIATSSYPEETKQIFPRTADIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFV--RSLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
D +I D +G+ DL LR + A F ED RI+RG R A LG + +
Sbjct: 123 FALDE-TGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPET 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM +L+ +E + R +E + +L
Sbjct: 182 FKAMKTLTPLLENISVERTFVEFDKLL 208
>sp|Q03M28|CCA_STRTD CCA-adding enzyme OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=cca PE=3 SV=1
Length = 402
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K+ GF+AY VGG VRD LL R D D+ +++ ++ ++ F R+ IG
Sbjct: 11 QKALPVLEKIKAAGFEAYFVGGSVRDALLNRPIHDVDIASSSYPEETKQIFERTVDIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V G EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLENGGEYEVTTFRTEDVYVDYRRPSSVSFVR--SLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
+ ++ D NG++DL LR + A F ED RI+RGLR AA L +
Sbjct: 123 FALNE-NAEVIDKFNGLADLDNRVLRAVGKAEERFNEDALRIMRGLRFAASLDFDIEEKT 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM S + +E++ R +E + +L
Sbjct: 182 FEAMTSHAFLLEKISIERSFIEFDKLL 208
>sp|Q6GGV2|CCA_STAAR CCA-adding enzyme OS=Staphylococcus aureus (strain MRSA252) GN=cca
PE=3 SV=1
Length = 400
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 19/229 (8%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD ++ R D D+ T+A +I F + +G+
Sbjct: 12 ILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F +E + + P G + VR + + RDFT+N++
Sbjct: 72 VVFNDENYEVTTFR-------AEEDYVDHRRPSG---VTFVRDLYEDLQRRDFTMNAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D NK+YDY +G D+ +RT+ A F ED R++R LR ++L + A
Sbjct: 122 DT-ANKLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSFDIATETFEA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFH 301
M + + I+ L RI++EL ++ I + + +N LK L F+
Sbjct: 181 MRTQMADIKFLSIERIVIELTKLM------RGINVEKSFNHLKSLKAFN 223
>sp|Q03Y57|CCA_LEUMM CCA-adding enzyme OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=cca PE=3 SV=1
Length = 401
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L L+ GF+AY VGG VRD +L + D D+ ++A ++++ FH + G +
Sbjct: 16 ILTKLEDAGFEAYFVGGSVRDTMLGKTIHDVDIASSAFPEEVKSLFHNTVDTGIQHGTVM 75
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRW--RNSIHRDFTINSLFF 192
V G+ E+++F + + + + D + VR + RDFTIN+L
Sbjct: 76 VLDHGTGYEITTFRVESTYTDFRR----------PDHVTFVRSLEEDLKRRDFTINALAM 125
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
++ D +G+ D++ +R + A FTED R++R LR +A+LG + D A
Sbjct: 126 -RHDGEVLDLFDGLEDMKKGVIRAVGDAEKRFTEDALRMMRALRFSAQLGFNIEADTQKA 184
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKIL 297
+ L+ ++ ++ R+ +E +L A S+ L R ++ L
Sbjct: 185 LVDLAPNLAKIAVERVRVEFEKLLLGSQASQSLELALRDQVMNYL 229
>sp|A8AX96|CCA_STRGC CCA-adding enzyme OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=cca PE=3 SV=1
Length = 399
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + VL+ +K+ GF+AY VGG VRD LL+R D D+ +++ ++ +R F R+ +G
Sbjct: 11 QEALPVLEKIKAAGFEAYFVGGSVRDALLQRPIHDVDIASSSYPEETKRIFDRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V EV++F T + + + +S + E DL R RDFTIN+
Sbjct: 71 HGTVLVLENNREYEVTTFRTEDVYVDYRRPSKVSFV--RSLEEDLKR------RDFTINA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
L D ++ D G+ DL LR + F ED RI+RG R A L +D
Sbjct: 123 LALDEN-GQLIDLFQGLDDLENRILRAVGTPAERFNEDALRIMRGFRFQATLNFDLEQDT 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
+AM + +E++ RI +E + +L
Sbjct: 182 LSAMTDCAPLLEKISVERIFIEFDKLL 208
>sp|Q5M5P1|CCA_STRT2 CCA-adding enzyme OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=cca PE=3 SV=1
Length = 402
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L+ +K+ GF+AY VGG VRD LL R D D+ +++ ++ ++ F R+ IG
Sbjct: 11 QKALPILEKIKAAGFEAYFVGGSVRDALLNRPIHDVDIASSSYPEETKQIFERTVDIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V G EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLENGGEYEVTTFRTEDVYVDYRRPSSVSFVR--SLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
+ ++ D NG++DL LR + A F ED RI+RGLR AA L +
Sbjct: 123 FALNE-NAEVIDKFNGLADLDNRVLRAVGKAEERFNEDALRIMRGLRFAASLDFDIEEKT 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM S + +E++ R +E + +L
Sbjct: 182 FEAMTSHAFLLEKISIERSFIEFDKLL 208
>sp|Q5M153|CCA_STRT1 CCA-adding enzyme OS=Streptococcus thermophilus (strain CNRZ 1066)
GN=cca PE=3 SV=1
Length = 402
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L+ +K+ GF+AY VGG VRD LL R D D+ +++ ++ ++ F R+ IG
Sbjct: 11 QKALPILEKIKAAGFEAYFVGGSVRDALLNRPIHDVDIASSSYPEETKQIFERTVDIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V G EV++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLENGGEYEVTTFRTEDVYVDYRRPSSVSFVR--SLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
+ ++ D NG++DL LR + A F ED RI+RGLR AA L +
Sbjct: 123 FALNE-NAEVIDKFNGLADLDNRVLRAVGKAEERFNEDALRIMRGLRFAASLDFDIEEKT 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELNYML 276
AM S + +E++ R +E + +L
Sbjct: 182 FEAMTSHAFLLEKISIERSFIEFDKLL 208
>sp|Q7A5K2|CCA_STAAN CCA-adding enzyme OS=Staphylococcus aureus (strain N315) GN=cca
PE=3 SV=1
Length = 400
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 25/271 (9%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD ++ R D D+ T+A +I F + +G+
Sbjct: 12 ILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F +E + + P G + VR + + RDFT+N++
Sbjct: 72 VVFNDENYEVTTF-------RAEEDYVDHRRPSG---VTFVRDLYEDLQRRDFTMNAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D K+YDY +G D+ +RT+ A F ED R++R LR ++L + A
Sbjct: 122 DTAY-KLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPF-HAAYLDQ-QAG 310
M + + I+ L RI++EL ++ E S +N LK L F + Y +Q
Sbjct: 181 MRTQMADIKFLSIERIVIELTKLMRGINVEES------FNHLKSLKAFNYMPYFEQLDMN 234
Query: 311 KITAENPMMLMRLFFNLDKLVSCDRPADYTL 341
+I P+ L L +VS +Y+L
Sbjct: 235 QINVTEPIDLELLI----AIVSVKFDINYSL 261
>sp|Q99U32|CCA_STAAM CCA-adding enzyme OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=cca PE=3 SV=1
Length = 400
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 25/271 (9%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD ++ R D D+ T+A +I F + +G+
Sbjct: 12 ILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F +E + + P G + VR + + RDFT+N++
Sbjct: 72 VVFNDENYEVTTF-------RAEEDYVDHRRPSG---VTFVRDLYEDLQRRDFTMNAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D K+YDY +G D+ +RT+ A F ED R++R LR ++L + A
Sbjct: 122 DTAY-KLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPF-HAAYLDQ-QAG 310
M + + I+ L RI++EL ++ E S +N LK L F + Y +Q
Sbjct: 181 MRTQMADIKFLSIERIVIELTKLMRGINVEES------FNHLKSLKAFNYMPYFEQLDMN 234
Query: 311 KITAENPMMLMRLFFNLDKLVSCDRPADYTL 341
+I P+ L L +VS +Y+L
Sbjct: 235 QINVTEPIDLELLI----AIVSVKFDINYSL 261
>sp|A7X2F4|CCA_STAA1 CCA-adding enzyme OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=cca PE=3 SV=1
Length = 400
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 25/271 (9%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD ++ R D D+ T+A +I F + +G+
Sbjct: 12 ILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F +E + + P G + VR + + RDFT+N++
Sbjct: 72 VVFNDENYEVTTF-------RAEEDYVDHRRPSG---VTFVRDLYEDLQRRDFTMNAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D K+YDY +G D+ +RT+ A F ED R++R LR ++L + A
Sbjct: 122 DTAY-KLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPF-HAAYLDQ-QAG 310
M + + I+ L RI++EL ++ E S +N LK L F + Y +Q
Sbjct: 181 MRTQMADIKFLSIERIVIELTKLMRGINVEES------FNHLKSLKAFNYMPYFEQLDMN 234
Query: 311 KITAENPMMLMRLFFNLDKLVSCDRPADYTL 341
+I P+ L L +VS +Y+L
Sbjct: 235 QINVTEPIDLELLI----AIVSVKFDINYSL 261
>sp|A2RF34|CCA_STRPG CCA-adding enzyme OS=Streptococcus pyogenes serotype M5 (strain
Manfredo) GN=cca PE=3 SV=1
Length = 402
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL+ +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLKQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q8P1E3|CCA_STRP8 CCA-adding enzyme OS=Streptococcus pyogenes serotype M18 (strain
MGAS8232) GN=cca PE=3 SV=1
Length = 402
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL+ +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLKQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q5XCN7|CCA_STRP6 CCA-adding enzyme OS=Streptococcus pyogenes serotype M6 (strain
ATCC BAA-946 / MGAS10394) GN=cca PE=3 SV=1
Length = 402
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL+ +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLKQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q3BXK9|CCA_XANC5 Multifunctional CCA protein OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=cca PE=3 SV=1
Length = 410
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 87 YLVGGCVRDLLLRRVPKDFD-VITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVIEVS 145
YLVGG VRD LL + D D V+ A+ Q+ Q + +G+ FP+ +H + S E +
Sbjct: 4 YLVGGAVRDALLEQPAGDRDWVVVGADQAQMEAQGFKP--VGKDFPVF-LHPR-SGEEYA 59
Query: 146 SFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDYANG 205
T K G G ++ P E DL+R RDFTIN++ D +++D NG
Sbjct: 60 LARTERKSGRGYRGFVVDADPSVTLEEDLLR------RDFTINAIARDEETGELFDPYNG 113
Query: 206 ISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAAR---LGLSFCKDIDTAMHSLSSS--I 260
DL+ LR + PA F ED R+LR R AR LG + D M +++S +
Sbjct: 114 ARDLQARVLRHVGPA---FVEDPVRVLRAARFMARLAPLGFTLAADTAALMREMAASGEL 170
Query: 261 ERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLP 299
+ L R+ EL LS + + L + L+++LP
Sbjct: 171 DSLVPERVWQELRRALSCAQPSAFLRTLHDADALRVILP 209
>sp|B9DRX9|CCA_STRU0 CCA-adding enzyme OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=cca PE=3 SV=1
Length = 403
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +LK +K GF+AY VGG VRD+LL R D D+ T++ ++ + F R+ IG
Sbjct: 11 QKALPILKKIKEAGFEAYFVGGGVRDILLDRPIHDVDIATSSYPEETKAIFSRTVDIGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINS 189
V + E+++F T + + + +S + E DL R RDFT+N+
Sbjct: 71 HGTVLVLENDAEYEITTFRTEDIYVDYRRPSNVSFVR--SLEEDLKR------RDFTVNA 122
Query: 190 LFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDI 249
L D ++ D +G+ DL+ +LR + A F ED RI+RG R AA L +
Sbjct: 123 LALDE-TGQVIDKFHGLQDLKRKELRAVGKAEERFQEDALRIMRGFRFAASLDFKIEDET 181
Query: 250 DTAMHSLSSSIERLDKSRIMMELN 273
AM + + ++++ R +EL+
Sbjct: 182 FEAMKTHAHLLQKISVERSFIELD 205
>sp|Q1JHE0|CCA_STRPD CCA-adding enzyme OS=Streptococcus pyogenes serotype M2 (strain
MGAS10270) GN=cca PE=3 SV=1
Length = 402
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLGRPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL+ +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLKQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAT 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q7SIB1|CCA_GEOSE CCA-adding enzyme OS=Geobacillus stearothermophilus GN=cca PE=1
SV=1
Length = 404
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+++ LK G+ AY VGG VRDLLL R D D+ T+A + + F ++ +G +
Sbjct: 11 IIQQLKQHGYDAYFVGGAVRDLLLGRPIGDVDIATSALPEDVMAIFPKTIDVGSKHGTVV 70
Query: 135 VHIKGSVIEVSSFETVAKHGEGK--ETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFF 192
V KG EV++F+T + + + E+V + E DL R RDFT+N++
Sbjct: 71 VVHKGKAYEVTTFKTDGDYEDYRRPESVTFVR----SLEEDLKR------RDFTMNAIAM 120
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D + I D G +R +RT+ A F ED R++R +R + LG + D + A
Sbjct: 121 DEY-GTIIDPFGGREAIRRRIIRTVGEAEKRFREDALRMMRAVRFVSELGFALAPDTEQA 179
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFHAAYLDQQAGK 311
+ + + + R+ ME+ +L A ++ LL L AYL AGK
Sbjct: 180 IVQNAPLLAHISVERMTMEMEKLLGGPFAARALPLLAETGL--------NAYLPGLAGK 230
>sp|P0DA19|CCA_STRPQ CCA-adding enzyme OS=Streptococcus pyogenes serotype M3 (strain
SSI-1) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q48U40|CCA_STRPM CCA-adding enzyme OS=Streptococcus pyogenes serotype M28 (strain
MGAS6180) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q1JM96|CCA_STRPC CCA-adding enzyme OS=Streptococcus pyogenes serotype M12 (strain
MGAS9429) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q1JCB2|CCA_STRPB CCA-adding enzyme OS=Streptococcus pyogenes serotype M12 (strain
MGAS2096) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|P0DA18|CCA_STRP3 CCA-adding enzyme OS=Streptococcus pyogenes serotype M3 (strain
ATCC BAA-595 / MGAS315) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q9PDL7|CCA_XYLFA Multifunctional CCA protein OS=Xylella fastidiosa (strain 9a5c)
GN=cca PE=3 SV=1
Length = 416
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 84 FQAYLVGGCVRDLLLRRVPKDFD-VITTANLKQIRRQFHRSEIIGRRFPICRVHIKGSVI 142
++YLVGG VRD LL + D D V+ A+ + ++ +GR FP+ +H K +
Sbjct: 1 MKSYLVGGAVRDALLGQPAGDCDWVVVGADPAHMESLGFKA--VGRDFPVF-LHPK-TGE 56
Query: 143 EVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDPFLNKIYDY 202
E + T K+G G +++ P E DL R RDFTIN++ D + + D
Sbjct: 57 EFALARTERKNGHGYRGFIVNADPTVTLEQDLQR------RDFTINAIAHDQTNDTLIDP 110
Query: 203 ANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAAR---LGLSFCKDIDTAMHSLSSS 259
G++DL LR + PA F ED R+LR R AR LG S + T M +++S
Sbjct: 111 YGGVNDLEQRILRHISPA---FAEDPLRVLRAARFMARLAPLGFSIAPETLTMMREMAAS 167
Query: 260 IE--RLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLP 299
E L RI EL+ L+Y + + LR N L+++LP
Sbjct: 168 GELNSLIPERIWKELSRSLAYTQPAAFLHTLRTVNALEVVLP 209
>sp|P42977|CCA_BACSU CCA-adding enzyme OS=Bacillus subtilis (strain 168) GN=cca PE=3
SV=2
Length = 397
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 15/230 (6%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
VL+IL G QAY VGG VRD ++R D D+ T A Q+ R F R+ +G+
Sbjct: 11 VLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPDQVERLFQRTVDVGKEHGTII 70
Query: 135 VHIKGSVIEVSSFETVAKHGEGK---ETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLF 191
V + EV++F T + + + + E +S + E DL R RD TIN++
Sbjct: 71 VLWEDETYEVTTFRTESDYVDFRRPSEVQFISSL-----EEDLKR------RDLTINAMA 119
Query: 192 FDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDT 251
K+ DY G D+ +RT+ F ED R+LR +R ++LG + + +
Sbjct: 120 MTAD-GKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE 178
Query: 252 AMHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPFH 301
A+ S + + R +E +L A+ ++ L + L + L F+
Sbjct: 179 AIAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRLYEELPGFY 228
>sp|Q1J760|CCA_STRPF CCA-adding enzyme OS=Streptococcus pyogenes serotype M4 (strain
MGAS10750) GN=cca PE=3 SV=1
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDVYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLEQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAA 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|Q2YY49|CCA_STAAB CCA-adding enzyme OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=cca PE=3 SV=1
Length = 400
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 25/271 (9%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
+L+ ++ GF+AY VGG VRD ++ R D D+ T+A +I F + +G+
Sbjct: 12 ILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTIN 71
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVR--WRNSIHRDFTINSLFF 192
V EV++F +E + + P G + VR + + RDFT+N++
Sbjct: 72 VVFNNENYEVTTF-------RAEEDYVDHRRPSG---VTFVRDLYEDLQRRDFTMNAIAM 121
Query: 193 DPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTA 252
D K+YDY +G D+ +RT+ A F ED R++R LR ++L + A
Sbjct: 122 DTAY-KLYDYFDGQQDINNRIIRTVGIAAERFQEDALRMIRCLRFQSQLSFEIATETFEA 180
Query: 253 MHSLSSSIERLDKSRIMMELNYMLSYGAAESSICLLRRYNLLKILLPF-HAAYLDQ-QAG 310
M + + I+ L RI++EL ++ I + + +N LK L F + Y +
Sbjct: 181 MRTQMADIKFLSIERIVIELTKLM------RGINVEKSFNHLKSLKAFNYMPYFEHLDMN 234
Query: 311 KITAENPMMLMRLFFNLDKLVSCDRPADYTL 341
+I P+ L L +VS +Y+L
Sbjct: 235 QINVTEPIDLELLI----AIVSVKFDINYSL 261
>sp|Q9A0A5|CCA_STRP1 CCA-adding enzyme OS=Streptococcus pyogenes serotype M1 GN=cca PE=3
SV=2
Length = 402
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 70 QPSWVVLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRR 129
Q + +L +K G++AY VGG VRD+LL R D D+ T++ ++ + F+R+ +G
Sbjct: 11 QKALPILTKIKEAGYEAYFVGGSVRDVLLERPIHDVDIATSSYPEETKAIFNRTVDVGIE 70
Query: 130 FPICRVHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCD-EIDLVRWRNSIHRDFTIN 188
V G E+++F T + + + SQ+ + E DL R RDFT+N
Sbjct: 71 HGTVLVLENGGEYEITTFRTEDIYVDYRRP---SQVSFVRSLEEDLKR------RDFTVN 121
Query: 189 SLFFDPFLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKD 248
+L D ++ D G+ DL+ +LR + A F ED RI+RG R AA L
Sbjct: 122 ALALDEN-GQVIDKFRGLIDLKQKRLRAVGKAEERFEEDALRIMRGFRFAASLDFDIEAI 180
Query: 249 IDTAMHSLSSSIERLDKSRIMMELNYML 276
AM S S +E++ R E + +L
Sbjct: 181 TFEAMRSHSPLLEKISVERSFTEFDKLL 208
>sp|A8YV39|CCA_LACH4 CCA-adding enzyme OS=Lactobacillus helveticus (strain DPC 4571)
GN=cca PE=3 SV=1
Length = 399
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 75 VLKILKSQGFQAYLVGGCVRDLLLRRVPKDFDVITTANLKQIRRQFHRSEIIGRRFPICR 134
VL+ L+ GF+AY VGG VRDLLL R D D+ T+A ++++ F +S G R
Sbjct: 17 VLQTLEDAGFEAYFVGGSVRDLLLDRHVHDVDITTSAYPEEVKELFAKSIDTGIRHGTVT 76
Query: 135 VHIKGSVIEVSSFETVAKHGEGKETVLLSQIPYGCDEIDLVRWRNSIHRDFTINSLFFDP 194
V G E+++F T + + + + ++ + DE DL R RDFTIN+L D
Sbjct: 77 VLYGGESYEITTFRTESGYQDYRRPDHVTFV-QNLDE-DLKR------RDFTINALAMD- 127
Query: 195 FLNKIYDYANGISDLRCLKLRTLIPAYLSFTEDCARILRGLRIAARLGLSFCKDIDTAMH 254
+I D NG+ DL+ +R + F ED R++R +R ++L + + + A+
Sbjct: 128 LHGQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQAIK 187
Query: 255 SLSSSIERLDKSRIMMELNYM 275
++++ RI E M
Sbjct: 188 DNHELLKKISVERIREEFVKM 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,180,731
Number of Sequences: 539616
Number of extensions: 10555278
Number of successful extensions: 38366
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 641
Number of HSP's that attempted gapping in prelim test: 36269
Number of HSP's gapped (non-prelim): 1804
length of query: 689
length of database: 191,569,459
effective HSP length: 124
effective length of query: 565
effective length of database: 124,657,075
effective search space: 70431247375
effective search space used: 70431247375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)