Query 005595
Match_columns 689
No_of_seqs 200 out of 1412
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 01:56:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005595.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005595hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 1E-198 2E-203 1586.9 42.5 675 1-688 148-834 (843)
2 PF00343 Phosphorylase: Carboh 100.0 2E-197 4E-202 1661.8 48.1 669 1-685 37-713 (713)
3 TIGR02093 P_ylase glycogen/sta 100.0 6E-196 1E-200 1663.5 58.5 668 1-683 117-794 (794)
4 PRK14985 maltodextrin phosphor 100.0 9E-196 2E-200 1659.8 58.0 666 1-684 126-797 (798)
5 cd04300 GT1_Glycogen_Phosphory 100.0 3E-194 6E-199 1655.9 60.3 668 1-683 120-797 (797)
6 PRK14986 glycogen phosphorylas 100.0 3E-193 6E-198 1644.8 59.9 671 1-688 137-815 (815)
7 COG0058 GlgP Glucan phosphoryl 100.0 4E-159 8E-164 1349.2 43.6 615 1-685 128-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 1E-125 2E-130 1098.5 46.3 540 1-681 119-688 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 8E-122 2E-126 1049.0 46.8 539 1-681 32-599 (601)
10 COG0297 GlgA Glycogen synthase 100.0 4.8E-54 1.1E-58 478.5 21.2 383 108-678 83-473 (487)
11 PLN02939 transferase, transfer 100.0 3.9E-48 8.4E-53 451.7 29.7 402 93-681 551-964 (977)
12 PRK14098 glycogen synthase; Pr 100.0 1.1E-46 2.5E-51 424.3 31.1 394 93-681 76-483 (489)
13 PRK14099 glycogen synthase; Pr 100.0 1.2E-44 2.6E-49 407.5 26.5 394 95-681 70-476 (485)
14 TIGR02095 glgA glycogen/starch 100.0 2.1E-41 4.6E-46 378.9 29.0 395 92-678 68-468 (473)
15 PRK00654 glgA glycogen synthas 100.0 1.7E-41 3.6E-46 379.8 27.4 390 96-678 63-458 (466)
16 cd03791 GT1_Glycogen_synthase_ 100.0 5E-40 1.1E-44 366.5 31.2 403 92-680 67-474 (476)
17 PLN02316 synthase/transferase 100.0 2.4E-39 5.1E-44 383.8 26.1 371 95-681 654-1031(1036)
18 PF08323 Glyco_transf_5: Starc 99.8 6.1E-21 1.3E-25 197.5 4.8 162 94-325 73-242 (245)
19 TIGR02470 sucr_synth sucrose s 99.8 1E-16 2.3E-21 187.8 25.5 194 403-679 540-744 (784)
20 cd03793 GT1_Glycogen_synthase_ 99.8 2.5E-16 5.3E-21 178.2 27.4 297 151-551 125-509 (590)
21 PLN00142 sucrose synthase 99.7 2.1E-15 4.6E-20 177.1 25.1 194 404-680 564-768 (815)
22 TIGR02468 sucrsPsyn_pln sucros 99.6 3.3E-14 7.1E-19 170.2 21.5 335 181-683 310-671 (1050)
23 TIGR02472 sucr_P_syn_N sucrose 99.6 1.2E-13 2.6E-18 154.0 24.3 256 290-680 175-438 (439)
24 TIGR02149 glgA_Coryne glycogen 99.6 9.6E-14 2.1E-18 149.8 22.0 243 293-678 138-382 (388)
25 TIGR03449 mycothiol_MshA UDP-N 99.5 3.3E-12 7.2E-17 139.4 25.5 241 295-681 159-400 (405)
26 cd03813 GT1_like_3 This family 99.4 2.3E-11 4.9E-16 137.3 23.8 235 291-678 236-472 (475)
27 cd03796 GT1_PIG-A_like This fa 99.4 1.3E-11 2.7E-16 135.5 20.4 119 411-556 191-309 (398)
28 cd03800 GT1_Sucrose_synthase T 99.3 1.6E-10 3.4E-15 124.3 21.9 239 294-677 158-397 (398)
29 cd04962 GT1_like_5 This family 99.3 2.4E-10 5.3E-15 122.1 22.0 232 292-679 135-367 (371)
30 cd03805 GT1_ALG2_like This fam 99.3 1.6E-10 3.5E-15 124.9 20.8 140 410-566 208-347 (392)
31 PLN02871 UDP-sulfoquinovose:DA 99.3 4.1E-10 8.8E-15 126.6 22.4 230 296-681 202-432 (465)
32 PRK15427 colanic acid biosynth 99.2 4.2E-10 9E-15 124.7 20.5 177 413-681 222-404 (406)
33 PRK15490 Vi polysaccharide bio 99.2 8.3E-10 1.8E-14 125.7 22.4 127 411-568 396-522 (578)
34 cd03821 GT1_Bme6_like This fam 99.2 9.5E-10 2.1E-14 114.7 20.9 123 410-557 200-322 (375)
35 cd03809 GT1_mtfB_like This fam 99.2 3.7E-10 8.1E-15 118.6 17.3 282 180-678 84-365 (365)
36 cd03819 GT1_WavL_like This fam 99.2 1E-09 2.3E-14 116.1 19.9 188 299-566 124-312 (355)
37 cd03822 GT1_ecORF704_like This 99.2 4.1E-09 8.9E-14 110.8 22.9 178 411-679 183-364 (366)
38 cd03788 GT1_TPS Trehalose-6-Ph 99.1 1.5E-09 3.3E-14 122.4 18.5 255 180-542 130-386 (460)
39 cd05844 GT1_like_7 Glycosyltra 99.1 5.3E-09 1.1E-13 111.6 20.3 174 413-678 188-366 (367)
40 cd03792 GT1_Trehalose_phosphor 99.1 1.8E-09 3.8E-14 117.1 16.6 186 404-682 183-371 (372)
41 PRK15179 Vi polysaccharide bio 99.1 1.3E-08 2.8E-13 119.8 24.5 127 410-567 514-640 (694)
42 cd03807 GT1_WbnK_like This fam 99.1 9.1E-09 2E-13 106.9 20.7 124 404-557 186-309 (365)
43 cd04951 GT1_WbdM_like This fam 99.1 8.5E-09 1.8E-13 109.0 20.7 121 404-555 181-301 (360)
44 cd03795 GT1_like_4 This family 99.1 8.8E-09 1.9E-13 108.7 19.5 181 296-566 134-314 (357)
45 cd03818 GT1_ExpC_like This fam 99.0 3.4E-09 7.3E-14 116.2 16.2 239 293-677 150-395 (396)
46 PRK10307 putative glycosyl tra 99.0 2.6E-08 5.5E-13 109.7 23.0 174 292-550 164-341 (412)
47 cd03808 GT1_cap1E_like This fa 99.0 2.2E-08 4.8E-13 103.5 20.3 173 410-677 185-358 (359)
48 PRK15484 lipopolysaccharide 1, 99.0 2.2E-08 4.7E-13 109.9 20.5 138 404-566 186-325 (380)
49 TIGR03088 stp2 sugar transfera 99.0 1.7E-08 3.6E-13 109.1 18.3 129 411-566 192-320 (374)
50 cd03799 GT1_amsK_like This is 99.0 1.9E-08 4E-13 106.2 18.2 170 296-557 127-302 (355)
51 cd03825 GT1_wcfI_like This fam 99.0 2.7E-08 5.9E-13 105.4 19.4 225 298-680 134-362 (365)
52 PF05693 Glycogen_syn: Glycoge 99.0 3.2E-08 6.9E-13 112.6 20.8 291 151-546 120-499 (633)
53 cd03801 GT1_YqgM_like This fam 99.0 8.5E-08 1.8E-12 98.9 21.2 287 180-678 84-371 (374)
54 cd03817 GT1_UGDG_like This fam 98.9 7.9E-08 1.7E-12 100.5 20.5 188 292-568 141-328 (374)
55 cd03798 GT1_wlbH_like This fam 98.9 1.2E-07 2.7E-12 98.3 20.6 176 294-556 143-318 (377)
56 cd03794 GT1_wbuB_like This fam 98.9 9.2E-08 2E-12 100.1 19.2 229 293-676 159-393 (394)
57 cd03802 GT1_AviGT4_like This f 98.9 4.4E-08 9.5E-13 102.9 16.5 122 414-567 172-293 (335)
58 PHA01633 putative glycosyl tra 98.9 2.2E-08 4.8E-13 108.6 14.2 185 411-677 146-334 (335)
59 TIGR02400 trehalose_OtsA alpha 98.8 1.7E-07 3.7E-12 105.8 20.1 253 181-542 127-381 (456)
60 cd03812 GT1_CapH_like This fam 98.8 4.8E-08 1E-12 103.6 14.1 176 294-557 132-307 (358)
61 cd03816 GT1_ALG1_like This fam 98.8 5.9E-07 1.3E-11 99.8 22.1 135 411-567 230-366 (415)
62 cd03814 GT1_like_2 This family 98.8 1.3E-06 2.8E-11 91.5 22.8 168 411-679 195-362 (364)
63 cd03811 GT1_WabH_like This fam 98.7 5.1E-07 1.1E-11 92.9 16.6 181 296-567 132-312 (353)
64 cd04949 GT1_gtfA_like This fam 98.6 1.8E-07 3.9E-12 100.8 11.0 168 413-676 204-372 (372)
65 TIGR02918 accessory Sec system 98.6 7.3E-07 1.6E-11 101.9 15.2 176 414-679 320-496 (500)
66 PLN02949 transferase, transfer 98.6 6.3E-07 1.4E-11 101.5 13.7 121 412-550 267-388 (463)
67 PRK10125 putative glycosyl tra 98.5 5.9E-06 1.3E-10 92.0 21.1 113 411-567 239-354 (405)
68 PF00534 Glycos_transf_1: Glyc 98.5 2.3E-06 4.9E-11 82.2 14.5 130 409-566 11-140 (172)
69 cd03820 GT1_amsD_like This fam 98.5 1.1E-06 2.5E-11 90.4 12.4 171 411-677 176-347 (348)
70 PRK09922 UDP-D-galactose:(gluc 98.5 5.6E-06 1.2E-10 89.8 18.0 122 413-566 180-306 (359)
71 cd04955 GT1_like_6 This family 98.5 1.2E-06 2.6E-11 92.9 12.3 111 414-553 194-305 (363)
72 PHA01630 putative group 1 glyc 98.4 1.7E-06 3.7E-11 93.8 12.9 185 413-679 142-327 (331)
73 PRK14501 putative bifunctional 98.4 8.1E-06 1.8E-10 97.4 19.8 258 181-551 133-401 (726)
74 PLN03063 alpha,alpha-trehalose 98.4 1.3E-05 2.7E-10 96.5 20.6 257 181-549 147-413 (797)
75 cd01635 Glycosyltransferase_GT 98.4 5.9E-07 1.3E-11 87.8 6.9 120 418-566 109-229 (229)
76 cd03823 GT1_ExpE7_like This fa 98.4 9.2E-06 2E-10 84.8 16.2 115 411-556 189-303 (359)
77 PLN02501 digalactosyldiacylgly 98.3 1.2E-05 2.7E-10 93.6 17.4 105 416-551 549-653 (794)
78 cd04946 GT1_AmsK_like This fam 98.3 1.1E-05 2.3E-10 89.6 15.5 229 291-677 175-406 (407)
79 TIGR03087 stp1 sugar transfera 98.2 1.6E-05 3.5E-10 87.4 14.1 165 293-549 166-331 (397)
80 cd03806 GT1_ALG11_like This fa 98.2 1.1E-05 2.4E-10 90.0 12.3 193 292-566 182-376 (419)
81 cd03804 GT1_wbaZ_like This fam 98.1 1E-05 2.2E-10 86.7 9.5 105 414-556 196-300 (351)
82 PLN02846 digalactosyldiacylgly 98.0 4.9E-05 1.1E-09 86.1 11.7 120 413-566 228-347 (462)
83 KOG1111 N-acetylglucosaminyltr 97.9 0.00011 2.3E-09 79.3 11.9 116 411-553 193-308 (426)
84 TIGR02398 gluc_glyc_Psyn gluco 97.8 0.0025 5.5E-08 72.8 22.1 136 401-550 278-420 (487)
85 PLN02275 transferase, transfer 97.3 0.0021 4.5E-08 70.5 11.7 136 414-567 214-358 (371)
86 KOG0853 Glycosyltransferase [C 97.2 0.0024 5.1E-08 72.5 10.9 143 411-568 271-415 (495)
87 COG0438 RfaG Glycosyltransfera 97.1 0.01 2.2E-07 59.9 14.5 118 413-557 199-317 (381)
88 PLN03064 alpha,alpha-trehalose 97.1 0.047 1E-06 66.8 21.6 126 413-550 363-498 (934)
89 KOG3742 Glycogen synthase [Car 96.9 0.0013 2.7E-08 72.8 5.7 176 182-444 175-355 (692)
90 TIGR00236 wecB UDP-N-acetylglu 96.4 0.35 7.5E-06 52.6 20.1 111 413-556 198-310 (365)
91 cd04950 GT1_like_1 Glycosyltra 96.0 0.059 1.3E-06 59.1 12.0 161 291-546 145-308 (373)
92 PF13692 Glyco_trans_1_4: Glyc 95.8 0.022 4.7E-07 52.4 6.3 102 412-548 1-103 (135)
93 TIGR03713 acc_sec_asp1 accesso 95.5 0.09 2E-06 60.8 11.3 177 411-676 319-515 (519)
94 PF00982 Glyco_transf_20: Glyc 94.6 1.2 2.6E-05 51.2 16.8 127 413-550 276-411 (474)
95 PRK05749 3-deoxy-D-manno-octul 94.3 0.56 1.2E-05 52.2 13.3 117 412-547 232-351 (425)
96 PRK10117 trehalose-6-phosphate 94.0 3.5 7.6E-05 47.4 18.9 128 413-551 255-392 (474)
97 PRK13609 diacylglycerol glucos 92.9 1.8 4E-05 47.2 14.1 44 496-547 257-300 (380)
98 PRK00726 murG undecaprenyldiph 92.5 2.9 6.2E-05 45.1 14.8 100 410-548 180-280 (357)
99 PRK13608 diacylglycerol glucos 91.1 2.2 4.7E-05 47.3 12.1 104 403-546 194-299 (391)
100 PLN02605 monogalactosyldiacylg 90.7 3.8 8.2E-05 45.1 13.5 111 403-547 198-309 (382)
101 PLN02205 alpha,alpha-trehalose 90.7 14 0.0003 45.7 19.2 132 411-551 337-490 (854)
102 TIGR01133 murG undecaprenyldip 89.1 5.8 0.00013 42.2 13.1 101 410-548 176-278 (348)
103 COG0380 OtsA Trehalose-6-phosp 88.9 25 0.00054 40.7 18.3 128 413-551 282-418 (486)
104 PF13579 Glyco_trans_4_4: Glyc 88.4 0.53 1.2E-05 43.2 3.9 89 180-336 72-160 (160)
105 cd03785 GT1_MurG MurG is an N- 85.3 17 0.00037 38.7 14.0 102 410-549 178-281 (350)
106 PF13524 Glyco_trans_1_2: Glyc 80.6 4.2 9E-05 35.1 5.8 35 643-677 56-91 (92)
107 PRK00025 lpxB lipid-A-disaccha 79.8 8.2 0.00018 41.9 9.0 108 403-548 178-288 (380)
108 TIGR00215 lpxB lipid-A-disacch 79.3 13 0.00028 41.3 10.5 114 403-553 183-299 (385)
109 cd03786 GT1_UDP-GlcNAc_2-Epime 77.6 13 0.00029 39.8 9.8 110 404-548 192-304 (363)
110 PF13439 Glyco_transf_4: Glyco 76.9 3.9 8.4E-05 38.1 4.8 40 297-342 137-176 (177)
111 PF13844 Glyco_transf_41: Glyc 49.1 3.1E+02 0.0067 31.8 13.8 114 403-550 277-393 (468)
112 PF13477 Glyco_trans_4_2: Glyc 47.2 26 0.00056 32.1 4.1 36 180-229 73-109 (139)
113 KOG2387 CTP synthase (UTP-ammo 45.3 5.4E+02 0.012 29.8 14.6 140 391-560 256-415 (585)
114 TIGR02919 accessory Sec system 44.7 57 0.0012 37.2 7.1 48 496-545 329-376 (438)
115 cd01635 Glycosyltransferase_GT 43.6 43 0.00094 32.1 5.3 46 180-239 50-95 (229)
116 KOG1387 Glycosyltransferase [C 42.7 4.4E+02 0.0094 29.7 12.9 84 453-546 303-386 (465)
117 PRK09814 beta-1,6-galactofuran 40.3 86 0.0019 33.8 7.5 69 496-569 208-287 (333)
118 TIGR03568 NeuC_NnaA UDP-N-acet 32.2 4.4E+02 0.0095 29.1 11.5 68 496-574 263-330 (365)
119 TIGR02672 cas_csm6 CRISPR-asso 30.4 25 0.00054 38.8 1.3 22 512-539 41-62 (362)
120 cd00127 DSPc Dual specificity 30.4 66 0.0014 29.5 4.0 37 180-220 81-120 (139)
121 PF09659 Cas_Csm6: CRISPR-asso 28.3 27 0.00058 39.2 1.1 22 512-539 38-59 (382)
122 PF00782 DSPc: Dual specificit 27.7 75 0.0016 29.1 3.9 35 181-219 74-111 (133)
123 PF02684 LpxB: Lipid-A-disacch 27.0 2.8E+02 0.006 31.1 8.8 111 409-553 180-292 (373)
124 PRK00726 murG undecaprenyldiph 20.6 2.3E+02 0.0049 30.4 6.5 36 645-680 320-355 (357)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-198 Score=1586.93 Aligned_cols=675 Identities=56% Similarity=0.937 Sum_probs=648.5
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeeEEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||||+||+|+|+|.+|||+|.||+||+.+||||+.|+++.+||+|||+|+.+++| .+|++++.|.|+|
T Consensus 148 MATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~ 226 (843)
T KOG2099|consen 148 MATLGLPAYGYGLRYEYGIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMP 226 (843)
T ss_pred HhhcCCccccccceeehhhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEec
Confidence 799999999999999999999999999999999999999999999999999999999999988777 6799999999999
Q ss_pred EeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhhH
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~l 160 (689)
||+|||||.|++||+||||+|+ +.++|+|..||.|+|.+|+...+.+++||.+|||+|+..+||+||||||||+|+|+|
T Consensus 227 YD~PvPGyk~n~vntlRLWsak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtL 305 (843)
T KOG2099|consen 227 YDTPVPGYKNNTVNTLRLWSAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATL 305 (843)
T ss_pred cCCCCCCcccCcceeeeeeccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHH
Confidence 9999999999999999999999 777999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccc------ccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhh
Q 005595 161 QDMILRFKERKS------GRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 234 (689)
Q Consensus 161 q~i~r~~~~~~g------~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~ 234 (689)
|||||||+...+ ...+.+||++++||+|||||+|+||||||+|+|.+|++|++||+++.++|+|||||++||++
T Consensus 306 qDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEAL 385 (843)
T KOG2099|consen 306 QDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEAL 385 (843)
T ss_pred HHHHHHHhhcccCcccccccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHH
Confidence 999999996542 13488999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHH
Q 005595 235 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDIL 314 (689)
Q Consensus 235 e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~ 314 (689)
|+||+++|+++||||+||||+||++|++.+.++||.|.|++++||++|+.++..++||++|||++||+||||+++|++++
T Consensus 386 ErWp~~L~e~LLPRHleIIy~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeil 465 (843)
T KOG2099|consen 386 ERWPVSLMEKLLPRHLEIIYEINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEIL 465 (843)
T ss_pred HHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999983222289999999999999999999999999
Q ss_pred HhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHH
Q 005595 315 KADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASK 394 (689)
Q Consensus 315 ~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K 394 (689)
|+..|++|+.++|+||.|+||||++||||..|||.|+++|.+.+| ++|..|+++|.+|+++++|++|+++|.++|++||
T Consensus 466 K~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NK 544 (843)
T KOG2099|consen 466 KQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENK 544 (843)
T ss_pred HHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhH
Confidence 999999999999999999999999999999999999999999999 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHH
Q 005595 395 KHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 474 (689)
Q Consensus 395 ~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~i 474 (689)
.+|++||.+++|+.++|+++||+||||+||||||.||+|+++.||.+||+ +|. +.++|++++|+|||+|+|++||.|
T Consensus 545 lk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~--k~fvprtvm~GGKaapgY~mAK~I 621 (843)
T KOG2099|consen 545 LKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA--KAFVPRTVMIGGKAAPGYHMAKLI 621 (843)
T ss_pred HHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh--hccCceEEEEcCccCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 554 357899999999999999999999
Q ss_pred HHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHH
Q 005595 475 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 554 (689)
Q Consensus 475 Ik~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi 554 (689)
||+|++++.++||||.+.++|||+|+|||+|++|++|+||+|+++++|+||+||||||||||||||+|+|||+||+||||
T Consensus 622 iklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm 701 (843)
T KOG2099|consen 622 IKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEM 701 (843)
T ss_pred HHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCcccc
Q 005595 555 RQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFL 628 (689)
Q Consensus 555 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~ 628 (689)
+|++|.||+|+||+.+|+|..++++| |+. +..+|+++.|++++.+|+|++.+ |.++++++.. .|+|+
T Consensus 702 ~eE~GeeN~FiFG~~~e~V~~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~------hD~f~ 774 (843)
T KOG2099|consen 702 AEEAGEENFFIFGMRVEDVEALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMY------HDYFL 774 (843)
T ss_pred HHHcCcccEEEecccHHHHHHHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhc------cceEE
Confidence 99999999999999999999999887 554 46689999999999999999888 6666676664 39999
Q ss_pred ccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 005595 629 VGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 688 (689)
Q Consensus 629 v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~~~~~~ 688 (689)
|++||+||++||+++.++|+|+++|.+|++.|+|.+|+|||||||.|||++||+++|++.
T Consensus 775 V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~ 834 (843)
T KOG2099|consen 775 VFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSEL 834 (843)
T ss_pred eeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999874
No 2
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=1.6e-197 Score=1661.79 Aligned_cols=669 Identities=52% Similarity=0.879 Sum_probs=603.8
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCcee-eeCCeeEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRK-WVGGEVVQAV 79 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~-w~~~~~v~a~ 79 (689)
|||||+|++||||||+||+|+|+|.||+|+|.||+|+..|+|||++|++.+|+|+|+|+|+ ..+|+.. |+++++|+|+
T Consensus 37 lAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av 115 (713)
T PF00343_consen 37 LATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWEIRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAV 115 (713)
T ss_dssp HHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTSEEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEE
T ss_pred HHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceEEecCCceEEEeccceEE-ecCCCcccccCCeEEEEE
Confidence 6899999999999999999999999999999999999999999999999999999999998 3456554 9999999999
Q ss_pred EEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhh
Q 005595 80 AYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSAS 159 (689)
Q Consensus 80 ~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~ 159 (689)
|||+|||||++++||+||||+|+ +..+||+..|+.|+|.+++++++.+++||++|||+|++++||+|||||||||++||
T Consensus 116 ~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~ 194 (713)
T PF00343_consen 116 PYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSAS 194 (713)
T ss_dssp EEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHHHHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHH
T ss_pred ecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHHHHHHhhceeeecCCCCccccchhhhhhhHhhhhhhH
Confidence 99999999999999999999999 78899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchH
Q 005595 160 LQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 239 (689)
Q Consensus 160 lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~ 239 (689)
+|||+|+|++.+ .+++.|+++.+||||||||||++||+||++||++|++|++||++|+++|+||||||+|||+|+||+
T Consensus 195 lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~ 272 (713)
T PF00343_consen 195 LQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPV 272 (713)
T ss_dssp HHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEH
T ss_pred HHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCH
Confidence 999999999999 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCC-CccchhchhhhcCCceeeehhhhHHHHHhhh
Q 005595 240 AVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKK-PVVRMANLCVVSAHTVNGVAQLHSDILKADL 318 (689)
Q Consensus 240 ~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~-~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~ 318 (689)
+||+++||||++||++||++|+.++...++.+.+++.+|+++++ +. ..||||+||+++|++|||||+||++++++++
T Consensus 273 ~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~ 350 (713)
T PF00343_consen 273 DLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE--GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMV 350 (713)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET--SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTT
T ss_pred HHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc--cchhhcchhHHHHHhcccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887 33 3899999999999999999999999999999
Q ss_pred hcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHH
Q 005595 319 FADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLA 398 (689)
Q Consensus 319 f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~ 398 (689)
|++|+.++|++|.+||||||+|||++.|||++++++++++| ++|.++++.+++|.++++|+.|+++|.++|+++|.+|+
T Consensus 351 f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~ 429 (713)
T PF00343_consen 351 FKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLA 429 (713)
T ss_dssp THHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-cccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHH
Q 005595 399 DYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLV 478 (689)
Q Consensus 399 ~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i 478 (689)
++|+++.|+.+||+++||+||||||+||||+||+|++++||.+|++ +|+. ..+|+||||||||||+|.+||+|||+|
T Consensus 430 ~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I 506 (713)
T PF00343_consen 430 EYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKN-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLI 506 (713)
T ss_dssp HHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH-STTS--CCS-EEEEEE----TT-HHHHHHHHHH
T ss_pred HHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHh-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 5652 467999999999999999999999999
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHh
Q 005595 479 NDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI 558 (689)
Q Consensus 479 ~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~ 558 (689)
+++|++||+||++.++|||||+|||||++|++|+||||||||+||||+||||||||||||||+|+|||+|||||||++++
T Consensus 507 ~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 507 NNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCC---CChHHHHHHHhhCCCCCCCccccccCC
Q 005595 559 GEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGS---YDYNPLLDSLEGNTGYGRGDYFLVGYD 632 (689)
Q Consensus 559 Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~---~~~~~l~~~l~~~~~~~~~D~~~v~~D 632 (689)
|++|+|+||.++|+|.+++.++ |+| ++.+|++++++|.+.+|.|++ ..|++|++++..+ +|+|||++|
T Consensus 587 G~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~D 660 (713)
T PF00343_consen 587 GEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQIISGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLAD 660 (713)
T ss_dssp -GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHHHTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHH
T ss_pred CCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHhcCCCCCCCchhHHHHHhCcCCC-----CCcchhhhh
Confidence 9999999999999999998777 887 477899999999999999977 4499999996555 899999999
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccc
Q 005595 633 FPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 685 (689)
Q Consensus 633 f~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~~~ 685 (689)
|+||++||++|.+.|.|+++|.+|++.|||++|+|||||||+|||++||+++|
T Consensus 661 f~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDrtI~~Ya~~IW~~~p 713 (713)
T PF00343_consen 661 FESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDRTIREYAEDIWNVKP 713 (713)
T ss_dssp HHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHHHHHTTTS--
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999999999999999999999999999987
No 3
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=6.2e-196 Score=1663.50 Aligned_cols=668 Identities=57% Similarity=0.947 Sum_probs=645.5
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeeEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQ 77 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~-g~~~--w~~~~~v~ 77 (689)
|||||+|++||||||+||||+|+|.||||+|.||+|+..++|||++|++.+++|+|+|+|+...+ |+.+ |++.+.|+
T Consensus 117 ~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~ 196 (794)
T TIGR02093 117 LATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVL 196 (794)
T ss_pred HHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEE
Confidence 69999999999999999999999999999999999999999999999999999999999976443 6433 99999999
Q ss_pred EEEEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhH
Q 005595 78 AVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCS 157 (689)
Q Consensus 78 a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~ 157 (689)
|+|||+|||||+++++|+||||+++ +...|++..|+.|+|.+++++++.+|+||++|||+|++++||+|||+||||||+
T Consensus 197 avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~ 275 (794)
T TIGR02093 197 AIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVS 275 (794)
T ss_pred EeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhhhhChhhcCccccCCcCCCCccchHHHHHHHHHHhhh
Confidence 9999999999999999999999999 466799999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhc
Q 005595 158 ASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKW 237 (689)
Q Consensus 158 a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f 237 (689)
||+|||+|+|++.+ ..++.|+++.+||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+|
T Consensus 276 aglqdiir~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w 353 (794)
T TIGR02093 276 ASLQDIIRRHLETH--PDLSDFPKKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKW 353 (794)
T ss_pred hHHHHHHHHHHHhC--CChhhCCcceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCc
Confidence 99999999999988 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCC-ccchhchhhhcCCceeeehhhhHHHHHh
Q 005595 238 SQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKA 316 (689)
Q Consensus 238 ~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~vnm~~lai~~S~~vNgVS~lh~ev~~~ 316 (689)
|++||+++||||++||++||++|+..+++.+|.|++++.+|+||++ +.+ +||||+||+++||+|||||++|++++++
T Consensus 354 p~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~ 431 (794)
T TIGR02093 354 PVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKE 431 (794)
T ss_pred CHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeeeec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 334 7999999999999999999999999999
Q ss_pred hhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHH
Q 005595 317 DLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKH 396 (689)
Q Consensus 317 ~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~ 396 (689)
.+|++|+.+||++|.+||||||+|||+.+|||+++++|++++| ++|.++++.|++|+++++|++|+++|+++|++||++
T Consensus 432 ~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig-~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~ 510 (794)
T TIGR02093 432 DLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIG-DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQR 510 (794)
T ss_pred HHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcC-chhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHH
Q 005595 397 LADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVK 476 (689)
Q Consensus 397 L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk 476 (689)
|++||+++.|+.+||+++||+|||||||||||+||+|++++||.+|++ +|+. .++|+||||||||||+|.+||+|||
T Consensus 511 L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk 587 (794)
T TIGR02093 511 LAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIK 587 (794)
T ss_pred HHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 5553 4679999999999999999999999
Q ss_pred HHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 005595 477 LVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 477 ~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
+|+++|++||+||+++++|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||++
T Consensus 588 lI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e 667 (794)
T TIGR02093 588 LINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIRE 667 (794)
T ss_pred HHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCcccccc
Q 005595 557 EIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVG 630 (689)
Q Consensus 557 ~~Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~ 630 (689)
++|++|+|+||+++++|.+++.++ |+| ++.+|.+++++|++.+|+|++.+ |++|+++|..+ +|+|||+
T Consensus 668 ~vG~eN~fiFG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl 741 (794)
T TIGR02093 668 EVGAENIFIFGLTVEEVEALREKG-YNPREYYEADPELKRVLDLISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVL 741 (794)
T ss_pred HhCcccEEEcCCCHHHHHHHHHcC-CCchhcccCCHHHHHHHHHHhcCCCCCCCchHHHHHHHHHccC-----CCeeeee
Confidence 999999999999999999999888 998 68899999999999999998655 99999999865 8999999
Q ss_pred CChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005595 631 YDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 683 (689)
Q Consensus 631 ~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~ 683 (689)
+||+||++||++|.++|.|+++|++|++.|||.+|+|||||||+|||++||++
T Consensus 742 ~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 794 (794)
T TIGR02093 742 ADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794 (794)
T ss_pred ccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999985
No 4
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=8.9e-196 Score=1659.84 Aligned_cols=666 Identities=46% Similarity=0.806 Sum_probs=646.1
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeeEEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||||+||||+|+|+||+|+|.||.|+..++||++++++..++|+|+|+++.. +|+.+|++++.|.|||
T Consensus 126 ~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avp 204 (798)
T PRK14985 126 MATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEA 204 (798)
T ss_pred HHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEe
Confidence 699999999999999999999999999999999999999999999999999999999999764 7877899999999999
Q ss_pred EeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhhH
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~l 160 (689)
||+|||||+++++|+||||++++++ +|++..|+.|+|.+++++++.+|+||++|||+|++++||+|||+||||||+||+
T Consensus 205 yDvpi~Gy~~~~~n~LRLW~a~~~~-~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~v 283 (798)
T PRK14985 205 WDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSV 283 (798)
T ss_pred ccccccCCCCCceEEEEEeEcCCCC-ccCHHHcCCcchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999654 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHH
Q 005595 161 QDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 240 (689)
Q Consensus 161 q~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~ 240 (689)
|||+|+|++.+ ++++.|++|.+||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||++
T Consensus 284 qdilr~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~ 361 (798)
T PRK14985 284 ADILRRHHLAG--RKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEK 361 (798)
T ss_pred HHHHHHHHhcC--CChhhCCCCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHH
Confidence 99999999876 6899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc
Q 005595 241 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA 320 (689)
Q Consensus 241 l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~ 320 (689)
||+++||||++||++||++|+..++..+|.+.+++.+|+||++ ++||||+||+++|++|||||++|++++++.+|+
T Consensus 362 l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~~~~sii~~----~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~ 437 (798)
T PRK14985 362 LVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVWAKLAVVHD----KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFP 437 (798)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHhhhhhhccC----CeeehHHHHHHhcchhHhhHHHHhchhHHhhhh
Confidence 9999999999999999999999999999999999999999986 489999999999999999999999998889999
Q ss_pred ChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHH
Q 005595 321 DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADY 400 (689)
Q Consensus 321 ~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~ 400 (689)
+|+.+||.+|.+||||||+|||+.+|||+++++|++++|+ +|.++++.+++|+++.+|++|+++|+++|++||++|++|
T Consensus 438 df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~ 516 (798)
T PRK14985 438 EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKTLKK-EWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEF 516 (798)
T ss_pred hhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCc-chhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999994 999999999999999999999999999999999999999
Q ss_pred HHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 005595 401 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 401 i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~ 480 (689)
|+++.|+.+||+++||+|||||||||||+||+|++++||.+|++ +|+. +++|+||||||||||+|.+||+|||+|++
T Consensus 517 i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~ 593 (798)
T PRK14985 517 VKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINK 593 (798)
T ss_pred HHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 5553 45799999999999999999999999999
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcC
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 560 (689)
Q Consensus 481 ~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg 560 (689)
+|++||+||+++++|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||++++|+
T Consensus 594 va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~ 673 (798)
T PRK14985 594 VAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGE 673 (798)
T ss_pred HHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChH
Q 005595 561 ENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFP 634 (689)
Q Consensus 561 ~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~~Df~ 634 (689)
+|+|+||+++++|.+++.++ |+| ++.+|++++|+|++.+|.|++.+ |++|+++|..+ +|+||||+||+
T Consensus 674 eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~ 747 (798)
T PRK14985 674 ENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFA 747 (798)
T ss_pred CcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHH
Confidence 99999999999999999888 998 57899999999999999998766 99999999865 89999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccc
Q 005595 635 SYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIT 684 (689)
Q Consensus 635 sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~~ 684 (689)
||++||++|.++|.|+++|++|++.|||.+|+|||||||+|||++||+++
T Consensus 748 sY~~~q~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~~ 797 (798)
T PRK14985 748 AYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 797 (798)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHccCCcCcHHHHHHHHHHhhCCC
Confidence 99999999999999999999999999999999999999999999999985
No 5
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=3e-194 Score=1655.93 Aligned_cols=668 Identities=56% Similarity=0.927 Sum_probs=644.2
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeeEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQ 77 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~-g~~~--w~~~~~v~ 77 (689)
|||||+|++||||||+||||+|+|++|||+|.||+|+..++|||+++++.+++|+|+|+++...+ |+.+ |++++.|+
T Consensus 120 ~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~ 199 (797)
T cd04300 120 LATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVL 199 (797)
T ss_pred HHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEE
Confidence 69999999999999999999999999999999999999999999999999999999999976443 6443 99999999
Q ss_pred EEEEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhH
Q 005595 78 AVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCS 157 (689)
Q Consensus 78 a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~ 157 (689)
|+|||+|||||+++++|+||||+++ +...|+++.|+.++|.+++++++.+|+||++|||+|++++||+|||+||||||+
T Consensus 200 avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~s 278 (797)
T cd04300 200 AVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVS 278 (797)
T ss_pred eeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhh
Confidence 9999999999999999999999999 456789999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhc
Q 005595 158 ASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKW 237 (689)
Q Consensus 158 a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f 237 (689)
||+|||+|+|++.++ +++.|+++.+||+|||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+|
T Consensus 279 ag~qdilr~~~~~~~--~~~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~w 356 (797)
T cd04300 279 ASLQDIIRRFKKTHG--PLSEFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKW 356 (797)
T ss_pred hHHHHHHHHHHHhCC--ChhhCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCcc
Confidence 999999999999984 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCC-CccchhchhhhcCCceeeehhhhHHHHHh
Q 005595 238 SQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKK-PVVRMANLCVVSAHTVNGVAQLHSDILKA 316 (689)
Q Consensus 238 ~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~-~~vnm~~lai~~S~~vNgVS~lh~ev~~~ 316 (689)
|++||+++||||++||++||++|+.++++.+|.+++++.+||++++ +. ++||||+||+++||+|||||++|++++++
T Consensus 357 p~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~ 434 (797)
T cd04300 357 PVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKE 434 (797)
T ss_pred CHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 33 37999999999999999999999999999
Q ss_pred hhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHH
Q 005595 317 DLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKH 396 (689)
Q Consensus 317 ~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~ 396 (689)
++|++|+.+||+||.+||||||+|||+.+|||+++++|++++|+ +|.++++.+++|.++++|++|+++|+++|++||++
T Consensus 435 ~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~ 513 (797)
T cd04300 435 TVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGD-DWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKER 513 (797)
T ss_pred hhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHH
Q 005595 397 LADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVK 476 (689)
Q Consensus 397 L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk 476 (689)
|++||+++.|+.+||+++||+|||||||||||+||+|++++||.+|++ +|+. +++|+||||||||||+|.+||+|||
T Consensus 514 L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk 590 (797)
T cd04300 514 LAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIK 590 (797)
T ss_pred HHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 5552 4679999999999999999999999
Q ss_pred HHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 005595 477 LVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 477 ~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
+|+++|++||+||+++++|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||++
T Consensus 591 lI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e 670 (797)
T cd04300 591 LINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAE 670 (797)
T ss_pred HHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCcccccc
Q 005595 557 EIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVG 630 (689)
Q Consensus 557 ~~Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~ 630 (689)
++|++|+|+||+++++|.+++.++ |+| ++.+|.+++++|.+.+|.|++.+ |++|+++|..+ +|+|||+
T Consensus 671 ~vG~eN~fiFG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl 744 (797)
T cd04300 671 EVGEENIFIFGLTAEEVEALRANG-YYPADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVL 744 (797)
T ss_pred HhCcCcEEEeCCCHHHHHHHHHcC-CChHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEee
Confidence 999999999999999999999888 666 78899999999999999997544 99999999865 8999999
Q ss_pred CChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005595 631 YDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 683 (689)
Q Consensus 631 ~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~ 683 (689)
+||+||++||++|...|.|+++|.+|++.|||.+|+|||||||+|||++||++
T Consensus 745 ~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 797 (797)
T cd04300 745 ADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797 (797)
T ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHccCCcCCcccHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999985
No 6
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=3e-193 Score=1644.84 Aligned_cols=671 Identities=45% Similarity=0.810 Sum_probs=648.4
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCce-eeeCCeeEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTR-KWVGGEVVQAV 79 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~-~w~~~~~v~a~ 79 (689)
|||||+|++||||||+||||+|+|.||||+|.||+|+..++||+++|++.+++|+|+|+++.. |.. +|+++++|+||
T Consensus 137 ~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~av 214 (815)
T PRK14986 137 LATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAV 214 (815)
T ss_pred HHhCCCCeEEEEecccCCCeEEEEECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEE
Confidence 699999999999999999999999999999999999999999999999999999999999753 633 39999999999
Q ss_pred EEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhh
Q 005595 80 AYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSAS 159 (689)
Q Consensus 80 ~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~ 159 (689)
|||+|||||+|+++|+||||+++ +..+||+..|+.|+|..++.+++.+++||++|||+|++++||+|||+||||||+||
T Consensus 215 pyD~pipgy~t~~vn~lRLW~a~-~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~ag 293 (815)
T PRK14986 215 AYDQIIPGYDTDATNTLRLWSAQ-ASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSAT 293 (815)
T ss_pred eCCccccCCCCCceEEEEEEEee-cCcccCHhhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHH
Confidence 99999999999999999999999 56789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchH
Q 005595 160 LQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 239 (689)
Q Consensus 160 lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~ 239 (689)
+|||+|+|++.+ ++++.|+++.+||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||+
T Consensus 294 v~di~r~~~~~~--~~l~~l~~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~ 371 (815)
T PRK14986 294 VQDILSRHYQLH--KTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPV 371 (815)
T ss_pred HHHHHHHHHHhC--CCHhhCCcccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCH
Confidence 999999999998 579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCC-ccchhchhhhcCCceeeehhhhHHHHHhhh
Q 005595 240 AVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADL 318 (689)
Q Consensus 240 ~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~vnm~~lai~~S~~vNgVS~lh~ev~~~~~ 318 (689)
+||+++||||++||++||++|+..+++++|.+++++.+++||++ +.+ +||||+||+++||+|||||++|++++++.+
T Consensus 372 ~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~~~~~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~ 449 (815)
T PRK14986 372 DMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSL 449 (815)
T ss_pred HHHHHHccHhhhHHHHHHHHHHHHHHHhCCCcHHHHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999986 333 799999999999999999999999998889
Q ss_pred hcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHH
Q 005595 319 FADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLA 398 (689)
Q Consensus 319 f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~ 398 (689)
|++|+.+||+||.+||||||+|||+.+|||+++++|++++|+ +|.++++++++|+++.+|++|+++|+++|+++|++|+
T Consensus 450 f~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~ 528 (815)
T PRK14986 450 FADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGR-TWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLA 528 (815)
T ss_pred HHHHHhhCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999995 9999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHH
Q 005595 399 DYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLV 478 (689)
Q Consensus 399 ~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i 478 (689)
++|+++.|..+||+++||+|||||||||||+||+|++++||.+|++ +|+. .++|+||||||||||+|.+||+|||+|
T Consensus 529 ~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I 605 (815)
T PRK14986 529 EYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLI 605 (815)
T ss_pred HHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 5542 457999999999999999999999999
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHh
Q 005595 479 NDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI 558 (689)
Q Consensus 479 ~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~ 558 (689)
+++|++|||||+++++|||||+|||+|++|++|+||||||||+|+||+||||||||||||||+|+|||+|||||||++++
T Consensus 606 ~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~v 685 (815)
T PRK14986 606 NDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHV 685 (815)
T ss_pred HHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCC
Q 005595 559 GEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYD 632 (689)
Q Consensus 559 Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~~D 632 (689)
|++|+|+||+++++|.+++.++ |+| ++.+|++++++|++.+|+|++.+ |++|+++|..+ +|+|||++|
T Consensus 686 G~eN~~~fG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~D 759 (815)
T PRK14986 686 GEENIFIFGNTAEEVEALRRQG-YKPREYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLAD 759 (815)
T ss_pred CCCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeecc
Confidence 9999999999999999999888 998 57899999999999999998665 99999999865 899999999
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 005595 633 FPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 688 (689)
Q Consensus 633 f~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~~~~~~ 688 (689)
|+||++||++|.++|.|+++|.+|++.|||.+|+|||||||+|||++||+++||++
T Consensus 760 f~sY~~aq~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~~Ya~~IW~~~p~~~ 815 (815)
T PRK14986 760 YRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVRL 815 (815)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999874
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-159 Score=1349.16 Aligned_cols=615 Identities=49% Similarity=0.786 Sum_probs=568.5
Q ss_pred CCCCCCCceEEeecCCCCcceEEeeCCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeeEEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||+|+||||+|++.||||+|.||.|+..++||++.+. . + |+|
T Consensus 128 ~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~---------------~---------~---a~~ 180 (750)
T COG0058 128 AADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRD---------------A---------E---GVP 180 (750)
T ss_pred HHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecc---------------c---------C---Cce
Confidence 699999999999999999999998899999999999999999998653 0 1 589
Q ss_pred EeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhhH
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~l 160 (689)
||+||+||++ ++|++|||++++++.+|.|..+|.+ +|.+.+|+||++|||+|+ ++|||+||||||+||+
T Consensus 181 ~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agv 249 (750)
T COG0058 181 YDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGV 249 (750)
T ss_pred eeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHH
Confidence 9999999999 9999999999987655555555555 568899999999999998 8999999999999999
Q ss_pred HHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHH
Q 005595 161 QDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 240 (689)
Q Consensus 161 q~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~ 240 (689)
|+|+++++..++ ++ ++-+.|||||||||++||+||.+++++|++|++||++|+.+|+||||||+|||+|+||++
T Consensus 250 q~I~~~~~~~~~--~~----~~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~ 323 (750)
T COG0058 250 QDILARGHLEHH--DL----DVLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVE 323 (750)
T ss_pred HHHHHHhhhccc--cc----cchhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHH
Confidence 999999554442 33 445688999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc
Q 005595 241 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA 320 (689)
Q Consensus 241 l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~ 320 (689)
||+++||||++||++||.+|+.+++...+.+ +..+++++++ ||||+||+++|++|||||+||+|+++++.++
T Consensus 324 l~~~~lpr~~~ii~~in~~~l~~~~~~~~~~--~~~~~~~i~~------v~Ma~lal~~S~~vNGVsklH~el~k~~~~~ 395 (750)
T COG0058 324 LFKKLLPRHLQIIYEINARFLPEVRLLYLGD--LIRRGSPIEE------VNMAVLALVGSHSVNGVSKLHSELSKKMWFA 395 (750)
T ss_pred HHHHHhhhhhhhHHHHHhhhhHHHHhhcccc--ccccCCcccc------eehhhhhhhhhhhhHhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998887 6667777653 9999999999999999999999999998888
Q ss_pred ChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHH
Q 005595 321 DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADY 400 (689)
Q Consensus 321 ~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~ 400 (689)
.|++++|.+|.+||||||+|||+..|||.+.+++.+.+|. .|..+++.+.++..+++|+.+++.|..+|.++|++|+++
T Consensus 396 ~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~-~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~ 474 (750)
T COG0058 396 DFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDEKIGD-EWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEE 474 (750)
T ss_pred HhcccCccccccccCCcCCchhhhhhhHHHHHHHhhhhhh-hhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999995 999999999999999999999999999999999999999
Q ss_pred HHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 005595 401 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 401 i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~ 480 (689)
++++.|+.++|+++||+||||||+||||+||+++++.+|..|++ + ...|+|+||||||||+|+.||+|||+|++
T Consensus 475 i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d-----~~prv~~iFaGKAhP~y~~aK~iIk~I~~ 548 (750)
T COG0058 475 IADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-D-----WVPRVQIIFAGKAHPADYAAKEIIKLIND 548 (750)
T ss_pred hhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-C-----CCCceEEEEeccCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888888863 1 12478889999999999999999999999
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcC
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 560 (689)
Q Consensus 481 ~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg 560 (689)
+|+++|+ ++||||+|||||++|++|+||||||||+|+||+||||||||||||||+|+|||||||||||++++|+
T Consensus 549 ~a~~in~------~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~ 622 (750)
T COG0058 549 VADVINN------KLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGG 622 (750)
T ss_pred HHHhhcc------cceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCC
Confidence 9999875 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhh-CCCCCCC-ccccccCC
Q 005595 561 ENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEG-NTGYGRG-DYFLVGYD 632 (689)
Q Consensus 561 ~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~-~~~~~~~-D~~~v~~D 632 (689)
+|||+||+.+++|..+..++.|.. +..+++++.+++.+.+|.|.+.. +++++++|.. . + |+||+++|
T Consensus 623 ~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~sl~~~~-----~~dr~~~~yd 697 (750)
T COG0058 623 ENGWIFGETVEEVDALRADGYDPNALYYELENEVKPVLDEIIDGRFSPGWKSRFKNLIDSLLPKF-----GTDRMMVLYD 697 (750)
T ss_pred CceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCcccHHHHHHHHHHhhhcc-----CccHHHHHHH
Confidence 999999999999998887765543 35678999999999999998755 7888888873 2 5 99999999
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccc
Q 005595 633 FPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 685 (689)
Q Consensus 633 f~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~~~ 685 (689)
|.+|++||+++...|.++++|.++++.|+|.+|.|||||||++|+.+||++.|
T Consensus 698 ~~~Y~~aq~~~~~~~~~~~~W~~~~i~nia~~g~fssDrtI~~Y~~~Iw~~~~ 750 (750)
T COG0058 698 FKAYVPAQEEVDALYRDQEAWTKKAILNIANSGLFSSDRTIREYAGEIWHIGP 750 (750)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHcCCCCchhHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999875
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=9.6e-126 Score=1098.48 Aligned_cols=540 Identities=25% Similarity=0.402 Sum_probs=468.5
Q ss_pred CCCCCCCceEEeecCCCCcceEEee-CCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeeEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAV 79 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~-dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~w~~~~~v~a~ 79 (689)
+||||+|++||||+|+||||+|+|+ ||||+|.|+.|...+.||+. +.+.+|+ +.++
T Consensus 119 asdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~---------------~~~~~G~------~~~v-- 175 (778)
T cd04299 119 ASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEP---------------VRDADGE------PVRV-- 175 (778)
T ss_pred HHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEE---------------EecCCCC------eEEE--
Confidence 5899999999999999999999999 99999999999888888874 1134564 3334
Q ss_pred EEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhh
Q 005595 80 AYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSAS 159 (689)
Q Consensus 80 ~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~ 159 (689)
.+|+||+ .+++|+|+++++ .+++|+++++.+. |...+|.||++|||+| +++||+||+|||+||
T Consensus 176 --~v~l~g~----~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 176 --SVELPGR----TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDRGITDRLYGGD-----QETRIQQEILLGIGG 238 (778)
T ss_pred --EEeeCCC----ceEEEEEEEEcC--CCCEEEecCCccc----cchhhcccccCCCCCc-----HHHHHHHHHHHHHHH
Confidence 3778997 679999999976 5899999999875 4678999999999988 477999999999999
Q ss_pred HHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchH
Q 005595 160 LQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 239 (689)
Q Consensus 160 lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~ 239 (689)
++.+ |+ .+ ++|+|||||||||||+++|+||++++++|++|++|+++|+.+||||||||+|||+|+||.
T Consensus 239 l~~L-r~---lg--------~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~ 306 (778)
T cd04299 239 VRAL-RA---LG--------IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPP 306 (778)
T ss_pred HHHH-HH---hC--------CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCH
Confidence 9865 32 23 479999999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhh
Q 005595 240 AVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLF 319 (689)
Q Consensus 240 ~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f 319 (689)
++++++||++++ .+|++++.+..+++....+..+.|||+++||++|++|||||++|++++++ ||
T Consensus 307 ~l~~~~~~~~~~---------------~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf 370 (778)
T cd04299 307 DLVERYFGPYAR---------------ELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MF 370 (778)
T ss_pred HHHHHHhhHHHH---------------HcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-Hh
Confidence 999999997753 47888888888887442001247999999999999999999999999996 89
Q ss_pred cChhhhcCCC---CccccccCCcccccccCChhhhHHHHHhcCccccccchhhHh--hhhccCCCHHHHHHHHHHHHHHH
Q 005595 320 ADYVSLWPNK---LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV--GLRQFADNTELQAEWESAKMASK 394 (689)
Q Consensus 320 ~~~~~l~p~k---~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~--~l~~~~~d~~~~~~~~~~K~~~K 394 (689)
++++..+|.+ |++||||||+++|+ ||+++++|++++|+ +|..+++... +....++|+++ | ++|++||
T Consensus 371 ~~~~~g~p~~~~~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~K 442 (778)
T cd04299 371 AGLWPGFPVEEVPIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRERPTDPELWEAVDDIPDEEL---W-EVRQQLR 442 (778)
T ss_pred hhhhccCCcccCceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhccchHHHHhhhcCCCcHHH---H-HHHHHHH
Confidence 8888777654 99999999999997 69999999999995 9998887433 33334778777 7 7999999
Q ss_pred HHHHHHHHHHh-----------------CCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeE
Q 005595 395 KHLADYIWRVT-----------------GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 457 (689)
Q Consensus 395 ~~L~~~i~~~~-----------------g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q 457 (689)
++|+++|++++ +..+||++||||||||||+|||++| ||++++||.+|++ +|. .|+|
T Consensus 443 ~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~~-----~pvQ 515 (778)
T cd04299 443 RRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DPE-----RPVQ 515 (778)
T ss_pred HHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeE
Confidence 99999998876 5569999999999999999999999 9999999999986 332 5999
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHh
Q 005595 458 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 537 (689)
Q Consensus 458 ~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~ 537 (689)
|||||||||+|+.||++||.|+++++ ||++++ ||+|+||||+++||+|+||||||||||+||+|||||||||||
T Consensus 516 ~IfaGKAhP~d~~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~ 589 (778)
T cd04299 516 FIFAGKAHPADEPGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAA 589 (778)
T ss_pred EEEEEecCccchHHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHH
Confidence 99999999999999999999999996 899999 999999999999999999999999999999999999999999
Q ss_pred hcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhh
Q 005595 538 LNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEG 617 (689)
Q Consensus 538 ~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~ 617 (689)
|||+|++||+||||.|.+ .|.|||+||.....- +.. .-+..++++||+.|++
T Consensus 590 ~NG~LnlSvlDGww~E~~---~g~nGwaig~~~~~~-~~~------------------------~~d~~da~~Ly~~Le~ 641 (778)
T cd04299 590 LNGGLNLSVLDGWWDEGY---DGENGWAIGDGDEYE-DDE------------------------YQDAEEAEALYDLLEN 641 (778)
T ss_pred HcCCeeeecccCcccccc---CCCCceEeCCCcccc-Chh------------------------hcchhhHHHHHHHHHH
Confidence 999999999999998765 579999999854211 100 0023458999999983
Q ss_pred CCCCCCCccccccCChHHHHHHHHHHHH-HhcC-----HHHHHHHHHHHhccCC-CCChHHHHHHHHHHHh
Q 005595 618 NTGYGRGDYFLVGYDFPSYLEAQDRVDQ-AYKD-----QKKWLKMSILSTAGSG-KFSSDRTIAQYAKEIW 681 (689)
Q Consensus 618 ~~~~~~~D~~~v~~Df~sY~~aq~~~~~-~Y~~-----~~~W~~~~~~~ma~~g-~FS~drti~eY~~~iw 681 (689)
.|.. +|.. |.+|.+||+++|+..+ +|||+||++||.++.|
T Consensus 642 ------------------------~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 642 ------------------------EVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred ------------------------HHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 5664 5553 7899999999999865 9999999999999999
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=8e-122 Score=1049.01 Aligned_cols=539 Identities=24% Similarity=0.396 Sum_probs=461.5
Q ss_pred CCCCCCCceEEeecCCCCcceEEee-CCeeeeeccccccCCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeeEEEE
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAV 79 (689)
Q Consensus 1 la~l~~p~~g~Gl~Y~~G~F~Q~I~-dG~Q~E~pd~Wl~~~~~w~~~~~~~~~~V~~~g~~~~~~~g~~~w~~~~~v~a~ 79 (689)
+||||+|++||||+|+||||+|+|+ ||||+|.|++|+..+.||+. | .+.+|+ . +
T Consensus 32 aa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~--------~-------~~~~g~-------~---~ 86 (601)
T TIGR02094 32 ASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEK--------V-------LDTDGK-------W---L 86 (601)
T ss_pred HHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEE--------E-------ecCCCC-------e---E
Confidence 5899999999999999999999999 99999999999998889875 1 134554 1 5
Q ss_pred EEeeccCCCCCcceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhh
Q 005595 80 AYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSAS 159 (689)
Q Consensus 80 ~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~ 159 (689)
+|++|++| +++++|+|+++++ ++++|+++++. ++|...+|.||++|||+| +++|++||+|||+|+
T Consensus 87 ~~~v~i~g----~~~~~rlw~~~~~--~v~lylld~~~----~~n~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~ 151 (601)
T TIGR02094 87 KISVRIRG----RDVYAKVWRVQVG--RVPLYLLDTNI----PENSEDDRWITGRLYGGD-----KEMRIAQEIVLGIGG 151 (601)
T ss_pred EEEEecCC----cEEEEEEEEEEeC--CCCEEEecCCC----cccchhhcCccCCCCCCC-----HHHHHHHHHHHHHHH
Confidence 88999999 4899999999974 68999999987 345678999999999988 578999999999999
Q ss_pred HHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchH
Q 005595 160 LQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 239 (689)
Q Consensus 160 lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~ 239 (689)
+|++ ++.+ ++|+|||||||||||+++||||+++ +++++|++||++|+.+||||||||+|||+|+||.
T Consensus 152 l~~l----~~l~--------~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~ 218 (601)
T TIGR02094 152 VRAL----RALG--------IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPE 218 (601)
T ss_pred HHHH----HHcC--------CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCH
Confidence 9875 2223 5999999999999999999999998 7899999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhh
Q 005595 240 AVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLF 319 (689)
Q Consensus 240 ~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f 319 (689)
+++.++||+. .++.+|+.+++ ..++.... ..+++|||+++||++|++|||||++|+++++ .+|
T Consensus 219 ~~~~~~~~~~-~~~~gl~~~~~--------------~~~~~~~~-~~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~ 281 (601)
T TIGR02094 219 DLMRKYFGDY-AANLGLPREQL--------------LALGRENP-DDPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMW 281 (601)
T ss_pred HHHHHHhhhh-hhHhCCCHHHH--------------Hhhhhhcc-CccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHH
Confidence 9999999983 45555555443 33333111 0124799999999999999999999999998 689
Q ss_pred cChhhhcCCC---CccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHH
Q 005595 320 ADYVSLWPNK---LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKH 396 (689)
Q Consensus 320 ~~~~~l~p~k---~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~ 396 (689)
+.|+.++|.+ |.|||||||+++|. ||.+..++.++.+ ++|.+++++++.|.++ |....++++++|++||++
T Consensus 282 ~~l~~~~~~~~~~i~gItNGId~~~W~---~~~~~~l~~~y~~-~~w~~~~~~~~~~~~~--~~~~~~~l~~~K~~~K~~ 355 (601)
T TIGR02094 282 QFLYPGYEEEEVPIGYVTNGVHNPTWV---APELRDLYERYLG-ENWRELLADEELWEAI--DDIPDEELWEVHLKLKAR 355 (601)
T ss_pred HhhhhhcccccCCccceeCCccccccC---CHHHHHHHHHhCC-cchhccchhhhhhhhc--ccccHHHHHHHHHHHHHH
Confidence 9998888776 99999999999996 5777788888888 4899999988888764 222233444899999999
Q ss_pred HHHHHHHHhCCc-----------------CCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEE
Q 005595 397 LADYIWRVTGVT-----------------IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM 459 (689)
Q Consensus 397 L~~~i~~~~g~~-----------------~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~I 459 (689)
|+++|++++|.. ++|++||||||||||+|||++| |+++++||.+|++ +|. .|+|||
T Consensus 356 L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~-----~pvq~V 428 (601)
T TIGR02094 356 LIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE-----RPVQIV 428 (601)
T ss_pred HHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEE
Confidence 999999876655 9999999999999999999999 9999999999986 433 499999
Q ss_pred EEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhc
Q 005595 460 IGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN 539 (689)
Q Consensus 460 f~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~N 539 (689)
|+|||||+|.+||++|+.|+++++ ||++++ ||+|++|||+++||+|+||||||||+|++|+|||||||||||+|
T Consensus 429 ~~Gka~p~d~~gk~~i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n 502 (601)
T TIGR02094 429 FAGKAHPADGEGKEIIQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN 502 (601)
T ss_pred EEEecCcccchHHHHHHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc
Confidence 999999999999999999999996 889999 99999999999999999999999999999999999999999999
Q ss_pred CceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCC
Q 005595 540 GCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNT 619 (689)
Q Consensus 540 G~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~ 619 (689)
|+|++||+||||+|.. ++.|||+||+..+.... ..-++.++++|++.|+
T Consensus 503 GgL~~sv~DG~~~E~~---~~~nGf~f~~~~~~~~~-------------------------~~~d~~da~~l~~~L~--- 551 (601)
T TIGR02094 503 GVLNLSILDGWWGEGY---DGDNGWAIGDGEEYDDE-------------------------EEQDRLDAEALYDLLE--- 551 (601)
T ss_pred CCceeecccCcccccC---CCCcEEEECCCcccccc-------------------------ccccCCCHHHHHHHHH---
Confidence 9999999999998765 45799999975322110 0113567899999997
Q ss_pred CCCCCccccccCChHHHHHHHHHHH-HHh-cC-----HHHHHHHHHHHhccCC-CCChHHHHHHHHHHHh
Q 005595 620 GYGRGDYFLVGYDFPSYLEAQDRVD-QAY-KD-----QKKWLKMSILSTAGSG-KFSSDRTIAQYAKEIW 681 (689)
Q Consensus 620 ~~~~~D~~~v~~Df~sY~~aq~~~~-~~Y-~~-----~~~W~~~~~~~ma~~g-~FS~drti~eY~~~iw 681 (689)
++. .+| ++ |+.|.+||+++|+..+ +|||+||+++|.+..|
T Consensus 552 ----------------------~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 552 ----------------------NEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred ----------------------HHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 544 655 44 6679999999999864 8999999999999877
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-54 Score=478.53 Aligned_cols=383 Identities=20% Similarity=0.208 Sum_probs=317.5
Q ss_pred ccccccCcchhhhhHhhhhhhccccccccCC-CCcchhhhhhhhhhhhhhHhhHHHHHHHHHHcccccccccCCCCcEEE
Q 005595 108 FNLFQFNDGQYESAAQLHSRAQQICAVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQ 186 (689)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~-D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viH 186 (689)
+++++++++.++++. -..+|+. |+. .++.+|+.|+++.+ ..+ ... +.|+|||
T Consensus 83 v~~~lid~~~~f~r~---------~~~~~~~~d~~--------~Rf~~F~~a~~~~~-----~~~----~~~-~~pDIvH 135 (487)
T COG0297 83 VDLYLIDNPALFKRP---------DSTLYGYYDNA--------ERFAFFSLAAAELA-----PLG----LIS-WLPDIVH 135 (487)
T ss_pred CcEEEecChhhcCcc---------ccccCCCCcHH--------HHHHHHHHHHHHHh-----hhc----CCC-CCCCEEE
Confidence 789999988888741 2356654 433 59999999998753 111 111 6899999
Q ss_pred eCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHh-chhHHHHHHHHHHHHHHHHH
Q 005595 187 LNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVR 265 (689)
Q Consensus 187 lND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~-lp~~~~ii~~in~~~~~~~~ 265 (689)
+||||+||+ |.+|+.... ......+|||+||+.+||+ |+...+..+ ||...
T Consensus 136 ~hDWqt~L~-~~~lk~~~~----------~~~~i~tVfTIHNl~~qG~--~~~~~~~~lgLp~~~--------------- 187 (487)
T COG0297 136 AHDWQTGLL-PAYLKQRYR----------SGYIIPTVFTIHNLAYQGL--FRLQYLEELGLPFEA--------------- 187 (487)
T ss_pred eecHHHHHH-HHHHhhccc----------ccccCCeEEEEeeceeecc--cchhhHHHhcCCHHH---------------
Confidence 999999998 788876430 1245679999999999999 885555544 55321
Q ss_pred HhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh---cCCCCccccccCCccc
Q 005595 266 STRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRR 341 (689)
Q Consensus 266 ~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l---~p~k~~~ItNGV~~~~ 341 (689)
+. +-..+. .+.+|+++.||..|+.|||||++|++++.++.|+ ++.++ ...+++||.||||...
T Consensus 188 ---------~~-~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~ 254 (487)
T COG0297 188 ---------YA-SFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDL 254 (487)
T ss_pred ---------hh-hceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecc
Confidence 21 111132 3579999999999999999999999999888888 66665 4688999999999999
Q ss_pred ccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeeccc
Q 005595 342 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 421 (689)
Q Consensus 342 Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR 421 (689)
| ||+.+.++..++. .++ + ..|.+||..|+ +++|++.+.+.|++++|+|
T Consensus 255 w----np~~d~~~~~~y~-----------------~~~------~-~~k~~nk~~L~----~~~gL~~~~~~pl~~~vsR 302 (487)
T COG0297 255 W----NPETDPYIAANYS-----------------AEV------L-PAKAENKVALQ----ERLGLDVDLPGPLFGFVSR 302 (487)
T ss_pred c----CcccccchhccCC-----------------ccc------h-hhhHHHHHHHH----HHhCCCCCCCCcEEEEeec
Confidence 9 9999999988877 344 5 46999999998 4999999999999999999
Q ss_pred chhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEc
Q 005595 422 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVP 501 (689)
Q Consensus 422 ~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~e 501 (689)
+++||+.|| ++.+++.+++. ..|+|+.|+|+|.++.+ +.++++++ ++ ++.+..
T Consensus 303 l~~QKG~dl-~~~~i~~~l~~------------~~~~vilG~gd~~le~~------~~~la~~~------~~--~~~~~i 355 (487)
T COG0297 303 LTAQKGLDL-LLEAIDELLEQ------------GWQLVLLGTGDPELEEA------LRALASRH------PG--RVLVVI 355 (487)
T ss_pred cccccchhH-HHHHHHHHHHh------------CceEEEEecCcHHHHHH------HHHHHHhc------Cc--eEEEEe
Confidence 999999999 99999999772 48999999999999986 79999865 67 999999
Q ss_pred CCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhcc
Q 005595 502 NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKERE 581 (689)
Q Consensus 502 nY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~ 581 (689)
.|++.+||+|++|||+|+|||+ +||||++||.||++|+||| ++++|| ++|||.+.+
T Consensus 356 ~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpI----------v~~tGG--------LadTV~~~~---- 411 (487)
T COG0297 356 GYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPI----------VRETGG--------LADTVVDRN---- 411 (487)
T ss_pred eecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcce----------EcccCC--------ccceecCcc----
Confidence 9999999999999999999999 9999999999999999999 689999 999999743
Q ss_pred CCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH-HHHHHHH
Q 005595 582 DGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK-WLKMSIL 659 (689)
Q Consensus 582 y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~-W~~~~~~ 659 (689)
++. ....++|+ |.+.++++|..+|. +|...|.+++. |.+++.+
T Consensus 412 --~~~--------~~~~gtGf~f~~~~~~~l~~al~-------------------------rA~~~y~~~~~~w~~~~~~ 456 (487)
T COG0297 412 --EWL--------IQGVGTGFLFLQTNPDHLANALR-------------------------RALVLYRAPPLLWRKVQPN 456 (487)
T ss_pred --chh--------ccCceeEEEEecCCHHHHHHHHH-------------------------HHHHHhhCCHHHHHHHHHh
Confidence 221 12468995 88889999999997 99999987777 9999999
Q ss_pred HhccCCCCChHHHHHHHHH
Q 005595 660 STAGSGKFSSDRTIAQYAK 678 (689)
Q Consensus 660 ~ma~~g~FS~drti~eY~~ 678 (689)
+|.. +||||.|+.+|.+
T Consensus 457 ~m~~--d~sw~~sa~~y~~ 473 (487)
T COG0297 457 AMGA--DFSWDLSAKEYVE 473 (487)
T ss_pred hccc--ccCchhHHHHHHH
Confidence 9984 9999999999976
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.9e-48 Score=451.68 Aligned_cols=402 Identities=16% Similarity=0.223 Sum_probs=309.6
Q ss_pred eEEEEEEEeecCCCcccccccCcc---hhhhhHhhhhhhccccccccCC-CCcchhhhhhhhhhhhhhHhhHHHHHHHHH
Q 005595 93 TISLRLWDAKASAEDFNLFQFNDG---QYESAAQLHSRAQQICAVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFK 168 (689)
Q Consensus 93 ~~~lrlw~a~v~~~~~~l~~~~~~---~~~~~~~~~~~~~~It~~LY~~-D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~ 168 (689)
....++|...++ ++++|+++.. .||.+ ..+|+. |+.+ +|.|||.|+++.+.
T Consensus 551 ~~~~~v~~~~~~--GV~vyfId~~~~~~fF~R-----------~~iYg~~Dn~~--------RF~~FsrAaLe~~~---- 605 (977)
T PLN02939 551 LFKNKIWTGTVE--GLPVYFIEPQHPSKFFWR-----------AQYYGEHDDFK--------RFSYFSRAALELLY---- 605 (977)
T ss_pred eeEEEEEEEEEC--CeeEEEEecCCchhccCC-----------CCCCCCccHHH--------HHHHHHHHHHHHHH----
Confidence 335789998754 6889999842 37764 578965 5555 99999999997542
Q ss_pred HcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchh
Q 005595 169 ERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPR 248 (689)
Q Consensus 169 ~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~ 248 (689)
+.+ +.||||||||||+||++|.+++.... .+ ....++|||+||+.+||. |+.+.+..
T Consensus 606 ~~~--------~~PDIIH~HDW~TaLV~pll~~~y~~-~~--------~~~~ktVfTIHNl~yQG~--f~~~~l~~---- 662 (977)
T PLN02939 606 QSG--------KKPDIIHCHDWQTAFVAPLYWDLYAP-KG--------FNSARICFTCHNFEYQGT--APASDLAS---- 662 (977)
T ss_pred hcC--------CCCCEEEECCccHHHHHHHHHHHHhh-cc--------CCCCcEEEEeCCCcCCCc--CCHHHHHH----
Confidence 112 68999999999999986666644221 12 134569999999999997 88776643
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh--
Q 005595 249 HMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL-- 325 (689)
Q Consensus 249 ~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l-- 325 (689)
+|++++.+.+....++ ..++.+|+++.||++|+.|+|||+.|++++++ .++ ++..+
T Consensus 663 -------------------lGL~~~~l~~~d~le~-~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~ 721 (977)
T PLN02939 663 -------------------CGLDVHQLDRPDRMQD-NAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLK 721 (977)
T ss_pred -------------------cCCCHHHccChhhhhh-ccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH-HhccchHHHhc
Confidence 2333333321111121 01358999999999999999999999998887 666 66655
Q ss_pred -cCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005595 326 -WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRV 404 (689)
Q Consensus 326 -~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~ 404 (689)
.+.++.+|.||||+..| ||..+++|...|+ ++| | ++|..||..|. ++
T Consensus 722 ~~~~Kl~gIlNGID~e~w----nPatD~~L~~~Ys-----------------~~d------l-~GK~~nK~aLR----ke 769 (977)
T PLN02939 722 FHSKKFVGILNGIDTDTW----NPSTDRFLKVQYN-----------------AND------L-QGKAANKAALR----KQ 769 (977)
T ss_pred cccCCceEEecceehhhc----CCccccccccccC-----------------hhh------h-hhhhhhhHHHH----HH
Confidence 36889999999999999 9999999999998 455 7 79999999987 58
Q ss_pred hCCcCC-CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC-CcCCHHHHHHHHHHHHHH
Q 005595 405 TGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVG 482 (689)
Q Consensus 405 ~g~~~~-p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa-~P~y~~aK~iIk~i~~~a 482 (689)
+|++.+ ++.+++++|.|++++||.++ ++..+.++.+ .++|+|++|.| .|.++. .+..++
T Consensus 770 lGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~------------~dvqLVIvGdGp~~~~e~------eL~~La 830 (977)
T PLN02939 770 LGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAE------------LGGQFVLLGSSPVPHIQR------EFEGIA 830 (977)
T ss_pred hCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhh------------cCCEEEEEeCCCcHHHHH------HHHHHH
Confidence 998754 78899999999999999999 9988877654 15799999998 454433 456666
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcc
Q 005595 483 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 562 (689)
Q Consensus 483 ~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n 562 (689)
+.+. ..+ +|.|+..|+..+++.+++|||++++||+ +||||+++|.||.+|++||++ .+||
T Consensus 831 ~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs----------~vGG-- 890 (977)
T PLN02939 831 DQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVR----------KTGG-- 890 (977)
T ss_pred HHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEe----------cCCC--
Confidence 6542 345 8999999999999999999999999999 999999999999999999976 5666
Q ss_pred eeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHH
Q 005595 563 FFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 641 (689)
Q Consensus 563 ~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~ 641 (689)
+.|+|.+.+ .... + ...++|+ |.+.|.++|.++|.
T Consensus 891 ------L~DtV~d~d------~e~i-~------~eg~NGfLf~~~D~eaLa~AL~------------------------- 926 (977)
T PLN02939 891 ------LNDSVFDFD------DETI-P------VELRNGFTFLTPDEQGLNSALE------------------------- 926 (977)
T ss_pred ------CcceeecCC------cccc-c------cCCCceEEecCCCHHHHHHHHH-------------------------
Confidence 777776432 0000 0 0135785 77888999999987
Q ss_pred HHHHHh-cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 642 RVDQAY-KDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 642 ~~~~~Y-~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
++...| .|++.|.+|..++|+. +|||++++++|.+ +|
T Consensus 927 rAL~~~~~dpe~~~~L~~~am~~--dFSWe~~A~qYee-LY 964 (977)
T PLN02939 927 RAFNYYKRKPEVWKQLVQKDMNI--DFSWDSSASQYEE-LY 964 (977)
T ss_pred HHHHHhccCHHHHHHHHHHHHHh--cCCHHHHHHHHHH-HH
Confidence 888766 6799999999999976 8999999999964 44
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-46 Score=424.30 Aligned_cols=394 Identities=19% Similarity=0.275 Sum_probs=306.4
Q ss_pred eEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCC--------CCcchhhhhhhhhhhhhhHhhHHHHH
Q 005595 93 TISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG--------DSTEEGKLLRLKQQFFLCSASLQDMI 164 (689)
Q Consensus 93 ~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~--------D~~~~gk~lRL~Qe~fl~~a~lq~i~ 164 (689)
+...+++.+..+..++++|+++++.|+++ ..+|++ |+.+ |+.||+.|+++.+
T Consensus 76 ~~~~~~~~~~~~~~~v~~~~~~~~~~f~r-----------~~~y~~~~~g~~~~d~~~--------rf~~f~~a~l~~~- 135 (489)
T PRK14098 76 TDLLHVKVTALPSSKIQTYFLYNEKYFKR-----------NGLFTDMSLGGDLKGSAE--------KVIFFNVGVLETL- 135 (489)
T ss_pred eEEEEEEEecccCCCceEEEEeCHHHcCC-----------CCcCCCCccCCCCCcHHH--------HHHHHHHHHHHHH-
Confidence 33445555543333588999999999975 568864 5555 9999999998753
Q ss_pred HHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHH
Q 005595 165 LRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWK 244 (689)
Q Consensus 165 r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~ 244 (689)
++.+ ++||+||+||||+|++ |.+++...... ..+ .+..+|||+||+.+||. |+...+..
T Consensus 136 ---~~~~--------~~pDiiH~hdw~t~l~-~~~l~~~~~~~-----~~~--~~~~~V~TiHn~~~qg~--~~~~~~~~ 194 (489)
T PRK14098 136 ---QRLG--------WKPDIIHCHDWYAGLV-PLLLKTVYADH-----EFF--KDIKTVLTIHNVYRQGV--LPFKVFQK 194 (489)
T ss_pred ---HhcC--------CCCCEEEecCcHHHHH-HHHHHHHhhhc-----ccc--CCCCEEEEcCCCcccCC--CCHHHHHH
Confidence 1122 6899999999999998 56777654211 111 35679999999999997 88877766
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhh-hhc-Ch
Q 005595 245 LLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKAD-LFA-DY 322 (689)
Q Consensus 245 ~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~-~f~-~~ 322 (689)
++|... +..+ +. ..+.+|+++.|+..|+.|++||+.|++++++. .++ ++
T Consensus 195 ~~~~~~------------------------~~~~---~~--~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl 245 (489)
T PRK14098 195 LLPEEV------------------------CSGL---HR--EGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGL 245 (489)
T ss_pred hCCHHh------------------------hhhh---hh--cCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcCh
Confidence 555321 0000 11 12479999999999999999999999988763 444 45
Q ss_pred hhh---cCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHH
Q 005595 323 VSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLAD 399 (689)
Q Consensus 323 ~~l---~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~ 399 (689)
..+ .+.++.+|.||||+..| ||..++.+.+.++ +++ + +.|..||..|.
T Consensus 246 ~~~l~~~~~kl~~I~NGID~~~~----~p~~d~~~~~~~~-----------------~~~------~-~~k~~~k~~l~- 296 (489)
T PRK14098 246 DKVLEERKMRLHGILNGIDTRQW----NPSTDKLIKKRYS-----------------IER------L-DGKLENKKALL- 296 (489)
T ss_pred HHHHHhcCCCeeEEeCCcccccc----CCcccccccccCC-----------------cch------h-hhHHHHHHHHH-
Confidence 443 36899999999999999 8988877777777 333 5 68999999887
Q ss_pred HHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 005595 400 YIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 479 (689)
Q Consensus 400 ~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~ 479 (689)
+++|+..+++.++++++.|++++|+.++ ++..+.++.+ .++|+|++|++.+.++. .+.
T Consensus 297 ---~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~------------~~~~lvivG~G~~~~~~------~l~ 354 (489)
T PRK14098 297 ---EEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVE------------LDIQLVICGSGDKEYEK------RFQ 354 (489)
T ss_pred ---HHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHh------------cCcEEEEEeCCCHHHHH------HHH
Confidence 5899998899999999999999999999 9998887654 16899999998765443 466
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhc
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 559 (689)
Q Consensus 480 ~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~G 559 (689)
++++.. ++ +|.|+..|+.++++.++++||++++||+ +|+||+++|.||++|+++|++ .+|
T Consensus 355 ~l~~~~------~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~G~ppVv~----------~~G 414 (489)
T PRK14098 355 DFAEEH------PE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSYGTIPVAY----------AGG 414 (489)
T ss_pred HHHHHC------CC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhCCCCeEEe----------cCC
Confidence 666642 45 7999999999999999999999999999 999999999999999999976 455
Q ss_pred CcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHH
Q 005595 560 EENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLE 638 (689)
Q Consensus 560 g~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~ 638 (689)
| +.|+|.+... .-++|+ |.+.|.++|.++|.
T Consensus 415 G--------l~d~v~~~~~------------------~~~~G~l~~~~d~~~la~ai~---------------------- 446 (489)
T PRK14098 415 G--------IVETIEEVSE------------------DKGSGFIFHDYTPEALVAKLG---------------------- 446 (489)
T ss_pred C--------CceeeecCCC------------------CCCceeEeCCCCHHHHHHHHH----------------------
Confidence 5 6666653210 014674 67778899999887
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 639 AQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 639 aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
++...|.|++.|.+++.++|+. +|||++++++|. ++|
T Consensus 447 ---~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~y~-~lY 483 (489)
T PRK14098 447 ---EALALYHDEERWEELVLEAMER--DFSWKNSAEEYA-QLY 483 (489)
T ss_pred ---HHHHHHcCHHHHHHHHHHHhcC--CCChHHHHHHHH-HHH
Confidence 8888999999999999999876 899999999995 444
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.2e-44 Score=407.46 Aligned_cols=394 Identities=17% Similarity=0.202 Sum_probs=301.7
Q ss_pred EEEEEEeecCCCcccccccCcchhhhhHhhhhhhcccccc-ccCC-------CCcchhhhhhhhhhhhhhHhhHHHHHHH
Q 005595 95 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAV-LYPG-------DSTEEGKLLRLKQQFFLCSASLQDMILR 166 (689)
Q Consensus 95 ~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~-LY~~-------D~~~~gk~lRL~Qe~fl~~a~lq~i~r~ 166 (689)
..++|.+.++ ++++|+++++.|+++ .. +|++ |+.+ ++.|||.|+++.+ +.
T Consensus 70 ~~~~~~~~~~--~v~~~~~~~~~~f~r-----------~~~~y~~~~~~~~~d~~~--------rf~~f~~a~~~~~-~~ 127 (485)
T PRK14099 70 PARLLAARAG--GLDLFVLDAPHLYDR-----------PGNPYVGPDGKDWPDNAQ--------RFAALARAAAAIG-QG 127 (485)
T ss_pred eEEEEEEEeC--CceEEEEeChHhhCC-----------CCCCCCCccCCCCCcHHH--------HHHHHHHHHHHHH-hh
Confidence 4678888754 688999999999975 22 6642 5655 9999999998743 11
Q ss_pred HHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhc
Q 005595 167 FKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL 246 (689)
Q Consensus 167 ~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~l 246 (689)
+..-++|||||+||||++++ |.+++.. ...+..+|||+||+.++|. |+..++..+
T Consensus 128 ---------~~~~~~pDIiH~Hdw~~~l~-~~~l~~~------------~~~~~~~V~TiHn~~~qg~--~~~~~~~~~- 182 (485)
T PRK14099 128 ---------LVPGFVPDIVHAHDWQAGLA-PAYLHYS------------GRPAPGTVFTIHNLAFQGQ--FPRELLGAL- 182 (485)
T ss_pred ---------hccCCCCCEEEECCcHHHHH-HHHHHhC------------CCCCCCEEEeCCCCCCCCc--CCHHHHHHc-
Confidence 10016899999999999997 5566521 0123569999999999997 887766543
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh
Q 005595 247 PRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL 325 (689)
Q Consensus 247 p~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l 325 (689)
+++++.+...++ +. .+.+|+++.++..|+.|++||+.+++++++..++ ++..+
T Consensus 183 ----------------------~~~~~~~~~~~~-~~---~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~ 236 (485)
T PRK14099 183 ----------------------GLPPSAFSLDGV-EY---YGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGL 236 (485)
T ss_pred ----------------------CCChHHcCchhh-hh---CCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHH
Confidence 222222211111 22 3578999999999999999999999988865444 45433
Q ss_pred ---cCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 005595 326 ---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIW 402 (689)
Q Consensus 326 ---~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~ 402 (689)
.+.++..|.||||+..| ||..++.+...++ +++ + +.|..||+.|.
T Consensus 237 l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~~-----------------~~~------~-~~k~~~k~~l~---- 284 (485)
T PRK14099 237 LRQRADRLSGILNGIDTAVW----NPATDELIAATYD-----------------VET------L-AARAANKAALQ---- 284 (485)
T ss_pred HHhhCCCeEEEecCCchhhc----cccccchhhhcCC-----------------hhH------H-HhHHHhHHHHH----
Confidence 36789999999999999 8999888888777 233 5 68899999886
Q ss_pred HHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 482 (689)
Q Consensus 403 ~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a 482 (689)
+++|++.+++.+++++|.|++++|+.++ +++.+.++.+ .++++|++|.+.+.++. .+.+++
T Consensus 285 ~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~------------~~~~lvivG~G~~~~~~------~l~~l~ 345 (485)
T PRK14099 285 ARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLG------------EGAQLALLGSGDAELEA------RFRAAA 345 (485)
T ss_pred HHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHh------------cCcEEEEEecCCHHHHH------HHHHHH
Confidence 5899987888999999999999999999 9998887754 15799999998765443 355555
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcc
Q 005595 483 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 562 (689)
Q Consensus 483 ~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n 562 (689)
+. .++ +++++.+|+..++++++++||++++||+ +|+||+++|.||.+|++||.| .+||
T Consensus 346 ~~------~~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs----------~~GG-- 403 (485)
T PRK14099 346 QA------YPG--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVA----------RVGG-- 403 (485)
T ss_pred HH------CCC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEe----------CCCC--
Confidence 53 244 7877889999999999999999999999 999999999999999999976 4566
Q ss_pred eeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHH
Q 005595 563 FFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 641 (689)
Q Consensus 563 ~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~ 641 (689)
+.|+|.+... .. +. ....+|+ |.+.|.++|.++|.
T Consensus 404 ------l~d~V~~~~~------~~---~~----~~~~~G~l~~~~d~~~La~ai~------------------------- 439 (485)
T PRK14099 404 ------LADTVVDANE------MA---IA----TGVATGVQFSPVTADALAAALR------------------------- 439 (485)
T ss_pred ------ccceeecccc------cc---cc----cCCCceEEeCCCCHHHHHHHHH-------------------------
Confidence 7777754210 00 00 0114675 78888999999997
Q ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 642 RVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 642 ~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
++..+|.|++.|.+|..++|+. +|||++++++|.+ +|
T Consensus 440 ~a~~l~~d~~~~~~l~~~~~~~--~fSw~~~a~~y~~-lY 476 (485)
T PRK14099 440 KTAALFADPVAWRRLQRNGMTT--DVSWRNPAQHYAA-LY 476 (485)
T ss_pred HHHHHhcCHHHHHHHHHHhhhh--cCChHHHHHHHHH-HH
Confidence 8888999999999999999975 8999999999954 44
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=2.1e-41 Score=378.89 Aligned_cols=395 Identities=18% Similarity=0.240 Sum_probs=298.8
Q ss_pred ceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhhHHHHHHHHHHcc
Q 005595 92 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 171 (689)
Q Consensus 92 ~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~~~~ 171 (689)
....+++|...++ ++++|+++++.++++ ...||++|-.. .+.++.+|+.|+++.+. +.+
T Consensus 68 ~~~~~~~~~~~~~--~v~~~~i~~~~~~~r----------~~~~y~~~~~d-----~~~r~~~f~~a~~~~~~----~~~ 126 (473)
T TIGR02095 68 RTLYVKVFEGVVE--GVPVYFIDNPSLFDR----------PGGIYGDDYPD-----NAERFAFFSRAAAELLS----GLG 126 (473)
T ss_pred ceeEEEEEEEEEC--CceEEEEECHHHcCC----------CCCCCCCCCCC-----HHHHHHHHHHHHHHHHH----hcC
Confidence 4678899998754 688999999887763 02599842111 34588999999987532 122
Q ss_pred cccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHH
Q 005595 172 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 251 (689)
Q Consensus 172 g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ 251 (689)
.+||+||+||||++++ +.+++..... .+..+|||+||+.++|. |+...+..+
T Consensus 127 --------~~~DiiH~hdw~~~~~-~~~l~~~~~~-----------~~~~~v~TiH~~~~~g~--~~~~~~~~~------ 178 (473)
T TIGR02095 127 --------WQPDVVHAHDWHTALV-PALLKAVYRP-----------NPIKTVFTIHNLAYQGV--FPADDFSEL------ 178 (473)
T ss_pred --------CCCCEEEECCcHHHHH-HHHHHhhccC-----------CCCCEEEEcCCCccCCc--CCHHHHHHc------
Confidence 5899999999999998 5566643210 14679999999999996 877665432
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh---cC
Q 005595 252 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP 327 (689)
Q Consensus 252 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l---~p 327 (689)
+++++.+.... .+. .+.+||++.++..|+.|++||+.|++.+++..++ ++..+ .+
T Consensus 179 -----------------~~~~~~~~~~~-~~~---~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~ 237 (473)
T TIGR02095 179 -----------------GLPPEYFHMEG-LEF---YGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARS 237 (473)
T ss_pred -----------------CCChHHcCchh-hhc---CCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcC
Confidence 22222121111 122 3479999999999999999999999888765554 44432 46
Q ss_pred CCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 005595 328 NKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGV 407 (689)
Q Consensus 328 ~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~ 407 (689)
.++..|.||||+..| ||+.++.+...++ +.+ + +.|..+|..|. +++|+
T Consensus 238 ~ki~~I~NGid~~~~----~p~~~~~~~~~~~-----------------~~~------~-~~k~~~k~~l~----~~~gl 285 (473)
T TIGR02095 238 GKLRGILNGIDTEVW----NPATDPYLKANYS-----------------ADD------L-AGKAENKEALQ----EELGL 285 (473)
T ss_pred CCeEEEeCCCCcccc----CCCCCcccccCcC-----------------ccc------h-hhhhhhHHHHH----HHcCC
Confidence 799999999999999 8988877766665 233 5 58888888876 58998
Q ss_pred cCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcC
Q 005595 408 TIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 487 (689)
Q Consensus 408 ~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~ 487 (689)
..+++.++++++.|+.++||.++ ++..+.++.+ .+++++++|+++|.+.. .+.++++.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~------------~~~~lvi~G~g~~~~~~------~l~~~~~~--- 343 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDL-LLAALPELLE------------LGGQLVVLGTGDPELEE------ALRELAER--- 343 (473)
T ss_pred CccCCCCEEEEEecCccccChHH-HHHHHHHHHH------------cCcEEEEECCCCHHHHH------HHHHHHHH---
Confidence 87778999999999999999999 9999888754 15899999999865543 45555553
Q ss_pred CcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 488 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 488 dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
.++ +|.|..+|+.++++.++++||++++||+ +|+||+++|.||.+|+++|++.. ||
T Consensus 344 ---~~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~s~~----------gg------- 399 (473)
T TIGR02095 344 ---YPG--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAMRYGTVPIVRRT----------GG------- 399 (473)
T ss_pred ---CCC--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHHHCCCCeEEccC----------CC-------
Confidence 244 7999999999999999999999999999 99999999999999999998744 44
Q ss_pred cccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 005595 568 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 646 (689)
Q Consensus 568 ~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~ 646 (689)
..|+|.+.+ +.. .-.+|. |.+.+.++|.++|. ++...
T Consensus 400 -~~e~v~~~~------~~~----------~~~~G~l~~~~d~~~la~~i~-------------------------~~l~~ 437 (473)
T TIGR02095 400 -LADTVVDGD------PEA----------ESGTGFLFEEYDPGALLAALS-------------------------RALRL 437 (473)
T ss_pred -ccceEecCC------CCC----------CCCceEEeCCCCHHHHHHHHH-------------------------HHHHH
Confidence 455554211 000 124564 66777888888886 78887
Q ss_pred hc-CHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 005595 647 YK-DQKKWLKMSILSTAGSGKFSSDRTIAQYAK 678 (689)
Q Consensus 647 Y~-~~~~W~~~~~~~ma~~g~FS~drti~eY~~ 678 (689)
|. +++.|.+|..++|+. +|||++++++|.+
T Consensus 438 ~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~ 468 (473)
T TIGR02095 438 YRQDPSLWEALQKNAMSQ--DFSWDKSAKQYVE 468 (473)
T ss_pred HhcCHHHHHHHHHHHhcc--CCCcHHHHHHHHH
Confidence 76 999999999999875 8999999999975
No 15
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.7e-41 Score=379.76 Aligned_cols=390 Identities=18% Similarity=0.229 Sum_probs=295.5
Q ss_pred EEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccC-CCCcchhhhhhhhhhhhhhHhhHHHHHHHHHHccccc
Q 005595 96 LRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYP-GDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGR 174 (689)
Q Consensus 96 lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~-~D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~~~~g~~ 174 (689)
.++|......+++++|+++++.|+.+ ..+|+ .|+.+ ++.||+.|+++.+ ++.+
T Consensus 63 ~~~~~~~~~~~gv~v~~v~~~~~~~~-----------~~~y~~~d~~~--------r~~~f~~~~~~~~----~~~~--- 116 (466)
T PRK00654 63 FTVLFGHLEGDGVPVYLIDAPHLFDR-----------PSGYGYPDNGE--------RFAFFSWAAAEFA----EGLD--- 116 (466)
T ss_pred EEEEEEeEEcCCceEEEEeCHHHcCC-----------CCCCCCcChHH--------HHHHHHHHHHHHH----HhcC---
Confidence 56776643335688999999888864 57887 45544 7789999998753 1122
Q ss_pred ccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHH
Q 005595 175 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 254 (689)
Q Consensus 175 ~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~ 254 (689)
.+||+||+||||+|++ +.+++... ..+ ..+..+|||+||+.++|. |+.+.+..+
T Consensus 117 -----~~pDiiH~h~w~~~~~-~~~l~~~~-~~~--------~~~~~~v~TiH~~~~~g~--~~~~~~~~~--------- 170 (466)
T PRK00654 117 -----PRPDIVHAHDWHTGLI-PALLKEKY-WRG--------YPDIKTVFTIHNLAYQGL--FPAEILGEL--------- 170 (466)
T ss_pred -----CCCceEEECCcHHHHH-HHHHHHhh-hcc--------CCCCCEEEEcCCCcCCCc--CCHHHHHHc---------
Confidence 5899999999999998 45665432 111 135679999999999996 877766543
Q ss_pred HHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhh---hcCCCC
Q 005595 255 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVS---LWPNKL 330 (689)
Q Consensus 255 ~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~---l~p~k~ 330 (689)
+++++.+. ....+. ++.+|+++.++..|+.|++||+.|++++++..++ ++.+ ..+.|+
T Consensus 171 --------------~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki 232 (466)
T PRK00654 171 --------------GLPAEAFH-LEGLEF---YGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKL 232 (466)
T ss_pred --------------CCChHHcC-chhhhc---CCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCc
Confidence 22222111 011121 2468999999999999999999999888766665 4543 346789
Q ss_pred ccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCC
Q 005595 331 QNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID 410 (689)
Q Consensus 331 ~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~ 410 (689)
..|.||||+..| ||..++.+...++. .+ + +.|..+|++|. +++|+. +
T Consensus 233 ~vI~NGid~~~~----~p~~~~~~~~~~~~-----------------~~------~-~~k~~~k~~l~----~~~gl~-~ 279 (466)
T PRK00654 233 SGILNGIDYDIW----NPETDPLLAANYSA-----------------DD------L-EGKAENKRALQ----ERFGLP-D 279 (466)
T ss_pred eEecCCCCcccc----CCccCcccccccCh-----------------hh------h-hchHHHHHHHH----HHhCCC-C
Confidence 999999999999 89888777777762 23 6 68888998886 588876 4
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++.++++++.|++++|+.++ ++.++.++.+ .+++++++|.+++.+.. .+.++++.+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~------------~~~~lvivG~g~~~~~~------~l~~l~~~~----- 335 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDL-VLEALPELLE------------QGGQLVLLGTGDPELEE------AFRALAARY----- 335 (466)
T ss_pred CCCcEEEEeeccccccChHH-HHHHHHHHHh------------cCCEEEEEecCcHHHHH------HHHHHHHHC-----
Confidence 57899999999999999999 9998887754 15799999998765443 455666542
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecccc
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 570 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~ 570 (689)
++ +|+|..+|+.++++.++++||++++||+ +|+||+++|.||.+|+++|+| .+|| ..
T Consensus 336 -~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V~~----------~~gG--------~~ 392 (466)
T PRK00654 336 -PG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPIVR----------RTGG--------LA 392 (466)
T ss_pred -CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEEEe----------CCCC--------cc
Confidence 44 7888899999999999999999999999 999999999999999999977 4455 55
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcC
Q 005595 571 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKD 649 (689)
Q Consensus 571 d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~ 649 (689)
|+|.+.+ ... ...+|. |.+.|.++|.++|. ++...|.+
T Consensus 393 e~v~~~~------~~~----------~~~~G~lv~~~d~~~la~~i~-------------------------~~l~~~~~ 431 (466)
T PRK00654 393 DTVIDYN------PED----------GEATGFVFDDFNAEDLLRALR-------------------------RALELYRQ 431 (466)
T ss_pred ceeecCC------CCC----------CCCceEEeCCCCHHHHHHHHH-------------------------HHHHHhcC
Confidence 5554311 000 125674 77778899999987 88888889
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 005595 650 QKKWLKMSILSTAGSGKFSSDRTIAQYAK 678 (689)
Q Consensus 650 ~~~W~~~~~~~ma~~g~FS~drti~eY~~ 678 (689)
++.|.+|..++|+. .|||++++++|.+
T Consensus 432 ~~~~~~~~~~~~~~--~fsw~~~a~~~~~ 458 (466)
T PRK00654 432 PPLWRALQRQAMAQ--DFSWDKSAEEYLE 458 (466)
T ss_pred HHHHHHHHHHHhcc--CCChHHHHHHHHH
Confidence 99999999999875 8999999999965
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=5e-40 Score=366.46 Aligned_cols=403 Identities=19% Similarity=0.224 Sum_probs=299.5
Q ss_pred ceEEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCCCCcchhhhhhhhhhhhhhHhhHHHHHHHHHHcc
Q 005595 92 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 171 (689)
Q Consensus 92 ~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~~~~ 171 (689)
....+++|...+. ++++|+++++.++.+ ..+|+. ...+-.-+..++.+|+.|+++.+. +.+
T Consensus 67 ~~~~~~~~~~~~~--gv~~~~l~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~f~~~~~~~l~----~~~ 127 (476)
T cd03791 67 RPEYVGVFELPVD--GVPVYFLDNPDYFDR-----------PGLYDD--SGYDYEDNAERFALFSRAALELLR----RLG 127 (476)
T ss_pred ceeEEEEEEEEeC--CceEEEEcChHHcCC-----------CCCCCc--cCCCCccHHHHHHHHHHHHHHHHH----hcC
Confidence 4678899988753 688999998887753 223211 000112255688999999987532 112
Q ss_pred cccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHH
Q 005595 172 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 251 (689)
Q Consensus 172 g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ 251 (689)
.+|++||+||||++++ +.+++..... ....+.++|||+|++.++|. |+...+....
T Consensus 128 --------~~pDviH~hd~~t~~~-~~~l~~~~~~--------~~~~~~~~v~tiH~~~~~g~--~~~~~~~~~~----- 183 (476)
T cd03791 128 --------WKPDIIHCHDWHTGLV-PALLKEKYAD--------PFFKNIKTVFTIHNLAYQGV--FPLEALEDLG----- 183 (476)
T ss_pred --------CCCcEEEECchHHHHH-HHHHHHhhcc--------ccCCCCCEEEEeCCCCCCCC--CCHHHHHHcC-----
Confidence 5899999999999998 4555543211 01246789999999999996 8776665431
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh---cC
Q 005595 252 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP 327 (689)
Q Consensus 252 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l---~p 327 (689)
..++......-.+ ....+||.+.++..|+.|++||+.|++++++..++ +++.+ .+
T Consensus 184 ------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~ 242 (476)
T cd03791 184 ------------------LPWEELFHIDGLE---FYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARA 242 (476)
T ss_pred ------------------CCccchhhhcccc---cCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhcc
Confidence 1110000111111 13479999999999999999999999988866555 45444 25
Q ss_pred CCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 005595 328 NKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGV 407 (689)
Q Consensus 328 ~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~ 407 (689)
.++..|+||||...| +|..++.+...+.. ++ + ..|..+|.+|. +++|+
T Consensus 243 ~ki~~I~NGid~~~~----~p~~~~~~~~~~~~-----------------~~------~-~~~~~~k~~l~----~~~g~ 290 (476)
T cd03791 243 GKLSGILNGIDYDVW----NPATDPHLPANYSA-----------------DD------L-EGKAENKAALQ----EELGL 290 (476)
T ss_pred CCeEEEeCCCcCccc----CccccchhhhcCCc-----------------cc------c-ccHHHHHHHHH----HHcCC
Confidence 789999999999999 78877776665541 22 5 68889999887 58998
Q ss_pred cCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcC
Q 005595 408 TIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 487 (689)
Q Consensus 408 ~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~ 487 (689)
..+++.++++++.|+.++||.++ ++.++.++.+ .+++++++|++++.+.. .+.++++..
T Consensus 291 ~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~------------~~~~lvi~G~g~~~~~~------~~~~~~~~~-- 349 (476)
T cd03791 291 PVDPDAPLFGFVGRLTEQKGIDL-LLEALPELLE------------LGGQLVILGSGDPEYEE------ALRELAARY-- 349 (476)
T ss_pred CcCCCCCEEEEEeeccccccHHH-HHHHHHHHHH------------cCcEEEEEecCCHHHHH------HHHHHHHhC--
Confidence 87899999999999999999999 9998888754 15899999999764432 455666532
Q ss_pred CcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 488 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 488 dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
.+ +|+|+.+|+.++++.++++||++++||+ +|+||+++|.||.+|+++|++.. ||
T Consensus 350 ----~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~~~~----------gg------- 404 (476)
T cd03791 350 ----PG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMYAMRYGTVPIVRAT----------GG------- 404 (476)
T ss_pred ----CC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHHHhhCCCCCEECcC----------CC-------
Confidence 45 7999999999999999999999999999 99999999999999999998744 44
Q ss_pred cccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 005595 568 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 646 (689)
Q Consensus 568 ~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~ 646 (689)
..|+|.+.. +.. ..++|. |.+.+.++|.++|. ++...
T Consensus 405 -~~e~v~~~~------~~~----------~~~~G~~~~~~~~~~l~~~i~-------------------------~~l~~ 442 (476)
T cd03791 405 -LADTVIDYN------EDT----------GEGTGFVFEGYNADALLAALR-------------------------RALAL 442 (476)
T ss_pred -ccceEeCCc------CCC----------CCCCeEEeCCCCHHHHHHHHH-------------------------HHHHH
Confidence 445554311 000 124674 67777889999887 88889
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005595 647 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 680 (689)
Q Consensus 647 Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~i 680 (689)
|.+++.|.+++.++++. .|||++++++|.+-.
T Consensus 443 ~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~y 474 (476)
T cd03791 443 YRDPEAWRKLQRNAMAQ--DFSWDRSAKEYLELY 474 (476)
T ss_pred HcCHHHHHHHHHHHhcc--CCChHHHHHHHHHHH
Confidence 99999999999999987 799999999998643
No 17
>PLN02316 synthase/transferase
Probab=100.00 E-value=2.4e-39 Score=383.85 Aligned_cols=371 Identities=17% Similarity=0.238 Sum_probs=278.7
Q ss_pred EEEEEEeecCCCcccccccCcc-hhhhhHhhhhhhccccccccC-CCCcchhhhhhhhhhhhhhHhhHHHHHHHHHHccc
Q 005595 95 SLRLWDAKASAEDFNLFQFNDG-QYESAAQLHSRAQQICAVLYP-GDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS 172 (689)
Q Consensus 95 ~lrlw~a~v~~~~~~l~~~~~~-~~~~~~~~~~~~~~It~~LY~-~D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~~~~~g 172 (689)
.+++|...++ ++++|++++. .+|.+ ..+|+ .|+.. ++.|||.|+++.+. +.+
T Consensus 654 ~~~v~~~~~~--GV~vyfl~~~~~~F~r-----------~~~Yg~~Dd~~--------RF~~F~~Aale~l~----~~~- 707 (1036)
T PLN02316 654 EIKVWFGKVE--GLSVYFLEPQNGMFWA-----------GCVYGCRNDGE--------RFGFFCHAALEFLL----QSG- 707 (1036)
T ss_pred EEEEEEEEEC--CcEEEEEeccccccCC-----------CCCCCchhHHH--------HHHHHHHHHHHHHH----hcC-
Confidence 4678887654 5789999865 46653 46787 46555 99999999998542 122
Q ss_pred ccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHH
Q 005595 173 GRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEI 252 (689)
Q Consensus 173 ~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~i 252 (689)
+.|+|||+||||+|++ +-+++......+ ..+..+|||+|++.+++
T Consensus 708 -------~~PDIIHaHDW~talv-a~llk~~~~~~~--------~~~~p~V~TiHnl~~~~------------------- 752 (1036)
T PLN02316 708 -------FHPDIIHCHDWSSAPV-AWLFKDHYAHYG--------LSKARVVFTIHNLEFGA------------------- 752 (1036)
T ss_pred -------CCCCEEEECCChHHHH-HHHHHHhhhhhc--------cCCCCEEEEeCCcccch-------------------
Confidence 5899999999999998 566665432212 14567999999875432
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhh--cCCCC
Q 005595 253 IEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSL--WPNKL 330 (689)
Q Consensus 253 i~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l--~p~k~ 330 (689)
|+.+.++..|+.|++||+.|++++.+. ..+ .+.|+
T Consensus 753 --------------------------------------n~lk~~l~~AD~ViTVS~tya~EI~~~-----~~l~~~~~Kl 789 (1036)
T PLN02316 753 --------------------------------------NHIGKAMAYADKATTVSPTYSREVSGN-----SAIAPHLYKF 789 (1036)
T ss_pred --------------------------------------hHHHHHHHHCCEEEeCCHHHHHHHHhc-----cCcccccCCE
Confidence 122346788999999999999877642 122 24789
Q ss_pred ccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCC
Q 005595 331 QNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID 410 (689)
Q Consensus 331 ~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~ 410 (689)
.+|.||||+..| ||..++++...++ ++| +.++|..||..|. +++|+. +
T Consensus 790 ~vI~NGID~~~w----~P~tD~~lp~~y~-----------------~~~------~~~gK~~~k~~Lr----~~lGL~-~ 837 (1036)
T PLN02316 790 HGILNGIDPDIW----DPYNDNFIPVPYT-----------------SEN------VVEGKRAAKEALQ----QRLGLK-Q 837 (1036)
T ss_pred EEEECCcccccc----CCcccccccccCC-----------------chh------hhhhhhhhHHHHH----HHhCCC-c
Confidence 999999999999 8999988888777 344 3368999999987 588987 4
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC-CcCCHHHHHHHHHHHHHHhhhcCCc
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDP 489 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa-~P~y~~aK~iIk~i~~~a~~in~dp 489 (689)
++.+++++|.||+++|+.+| |++.+.++++ .++|+|++|.| .+.++. .+.++++.+..
T Consensus 838 ~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~------------~~~qlVIvG~Gpd~~~e~------~l~~La~~Lg~-- 896 (1036)
T PLN02316 838 ADLPLVGIITRLTHQKGIHL-IKHAIWRTLE------------RNGQVVLLGSAPDPRIQN------DFVNLANQLHS-- 896 (1036)
T ss_pred ccCeEEEEEeccccccCHHH-HHHHHHHHhh------------cCcEEEEEeCCCCHHHHH------HHHHHHHHhCc--
Confidence 57899999999999999999 9998888754 16899999988 443332 35555654310
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccc
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 569 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~ 569 (689)
.+++ +|.|...|+..++|++++|||++++||+ +||||+++|.||.+|+++|++ .+|| +
T Consensus 897 ~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs----------~vGG--------L 954 (1036)
T PLN02316 897 SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVR----------KTGG--------L 954 (1036)
T ss_pred cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEE----------cCCC--------c
Confidence 2356 8999999999999999999999999999 999999999999999999976 5666 6
Q ss_pred cccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc
Q 005595 570 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 648 (689)
Q Consensus 570 ~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~ 648 (689)
.|+|.+.+.. ..... ......+|+ |.+.+.++|..+|. ++...|.
T Consensus 955 ~DtV~d~d~~------~~~~~---~~g~~~tGflf~~~d~~aLa~AL~-------------------------raL~~~~ 1000 (1036)
T PLN02316 955 FDTVFDVDHD------KERAQ---AQGLEPNGFSFDGADAAGVDYALN-------------------------RAISAWY 1000 (1036)
T ss_pred Hhhccccccc------ccccc---ccccCCceEEeCCCCHHHHHHHHH-------------------------HHHhhhh
Confidence 6777643210 00000 000125785 88889999999997 8888874
Q ss_pred -CHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 649 -DQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 649 -~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
.+..|.+++++.|+. +|||++++++|.+ +|
T Consensus 1001 ~~~~~~~~~~r~~m~~--dFSW~~~A~~Y~~-LY 1031 (1036)
T PLN02316 1001 DGRDWFNSLCKRVMEQ--DWSWNRPALDYME-LY 1031 (1036)
T ss_pred hhHHHHHHHHHHHHHh--hCCHHHHHHHHHH-HH
Confidence 455569999999987 8999999999964 44
No 18
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.82 E-value=6.1e-21 Score=197.49 Aligned_cols=162 Identities=13% Similarity=0.192 Sum_probs=112.3
Q ss_pred EEEEEEEeecCCCcccccccCcchhhhhHhhhhhhccccccccCC------CCcchhhhhhhhhhhhhhHhhHHHHHHHH
Q 005595 94 ISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG------DSTEEGKLLRLKQQFFLCSASLQDMILRF 167 (689)
Q Consensus 94 ~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~~~It~~LY~~------D~~~~gk~lRL~Qe~fl~~a~lq~i~r~~ 167 (689)
..+++|+..+ +++++|+++++.|+++ ..+|++ |+. .++.||+.|+++.+
T Consensus 73 ~~~~v~~~~~--~~v~v~~i~~~~~f~r-----------~~iY~~~~~~~~d~~--------~rf~~fs~a~le~~---- 127 (245)
T PF08323_consen 73 YEVRVYRYPV--DGVPVYFIDNPEYFDR-----------PGIYGDNGGDYPDNA--------ERFAFFSRAALELL---- 127 (245)
T ss_dssp --EEEEEEEE--TTEEEEEEESHHHHGS-----------SSSSBSTSSBHTTHH--------HHHHHHHHHHHHHH----
T ss_pred eEEEEEEEEc--CCccEEEecChhhccc-----------cceeccCCCcchhHH--------HHHHHHHHHHHHHH----
Confidence 4678898875 3789999999998864 669975 444 48899999998753
Q ss_pred HHcccccccccC-CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhc
Q 005595 168 KERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL 246 (689)
Q Consensus 168 ~~~~g~~~l~~l-~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~l 246 (689)
+.+ ++||||||||||+|++ |.+||.... .+..+ .+.++|||+||+.+||. |+.+.+.
T Consensus 128 ---------~~l~~~pDIIH~hDW~tal~-p~~lk~~~~-----~~~~~--~~~~~v~TIHN~~yqg~--~~~~~~~--- 185 (245)
T PF08323_consen 128 ---------KKLGWKPDIIHCHDWHTALA-PLYLKERYQ-----QDPFF--ANIPTVFTIHNLEYQGI--FPPEDLK--- 185 (245)
T ss_dssp ---------CTCT-S-SEEEEECGGGTTH-HHHHHHCCS-----S--------SEEEEEESSTT---E--EEGGGGG---
T ss_pred ---------HhhCCCCCEEEecCchHHHH-HHHhccccc-----ccccc--ccceeEEEEcccccCCc--CCHHHHH---
Confidence 233 6899999999999998 677776432 11222 45789999999999998 8766553
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhc-Chhhh
Q 005595 247 PRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL 325 (689)
Q Consensus 247 p~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~-~~~~l 325 (689)
.++++++.+......+. ++.+||++.||..|++|||||++|++++++..++ |++++
T Consensus 186 --------------------~~gl~~~~~~~~~~~~~---~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~~~g~GL~~~ 242 (245)
T PF08323_consen 186 --------------------ALGLPDEYFQNLDEYEF---YGQINFLKAGIVYADKVTTVSPTYAREIQTPEFGEGLEGL 242 (245)
T ss_dssp --------------------CTT-GGGGS-STTTTEE---TTEEEHHHHHHHHSSEEEESSHHHHHHTTSHHHHTT-HHH
T ss_pred --------------------HcCCCHHHhcccccccc---ccccCHHHHHHHhcCEeeeCCHHHHHHHhCcccCCChHHH
Confidence 23444443323333333 4589999999999999999999999999988877 67654
No 19
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.75 E-value=1e-16 Score=187.79 Aligned_cols=194 Identities=13% Similarity=0.127 Sum_probs=142.9
Q ss_pred HHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC----cCCHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF----ATYTNAKRIVKLV 478 (689)
Q Consensus 403 ~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~----P~y~~aK~iIk~i 478 (689)
+.+|+..+|+.+++.+|.|+.+.|+.+. ++..+.++.++. ...++|+.|.+. ..+...+..++.+
T Consensus 540 ~~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~----------~~~~LVIVGGg~~~~~s~d~ee~~~i~~L 608 (784)
T TIGR02470 540 EHYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLR----------ELVNLVVVAGKLDAKESKDREEQAEIEKM 608 (784)
T ss_pred HHhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhC----------CCeEEEEEeCCcccccccchhHHHHHHHH
Confidence 4678777899999999999999999998 888877665432 146777766542 1244445567777
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCC-----CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 005595 479 NDVGEVVNTDPEVNSYLKVVFVPNY-----NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 479 ~~~a~~in~dp~~~~~lkVvF~enY-----~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
.++++.. .+.+ +|.|+--- .-++.+.+-.++|++.+||+ +||||++.+-||..|.+.|+|..|+..|
T Consensus 609 ~~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~E 680 (784)
T TIGR02470 609 HNLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLE 680 (784)
T ss_pred HHHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHH
Confidence 7777754 3567 78875421 12344444457899999999 9999999999999999999998888777
Q ss_pred HHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCCh
Q 005595 554 IRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDF 633 (689)
Q Consensus 554 i~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df 633 (689)
+++. |.|||+| .+.|.+++.++|.
T Consensus 681 iV~d--g~tGfLV-------------------------------------dp~D~eaLA~aL~----------------- 704 (784)
T TIGR02470 681 IIQD--GVSGFHI-------------------------------------DPYHGEEAAEKIV----------------- 704 (784)
T ss_pred HhcC--CCcEEEe-------------------------------------CCCCHHHHHHHHH-----------------
Confidence 6654 4555555 2334567777775
Q ss_pred HHHHHHHHHHH-HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 005595 634 PSYLEAQDRVD-QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKE 679 (689)
Q Consensus 634 ~sY~~aq~~~~-~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~ 679 (689)
++. ....|++.|.+|..+++... ..|||++++++|.+-
T Consensus 705 --------~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 705 --------DFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred --------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 444 35679999999999998754 489999999999764
No 20
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.75 E-value=2.5e-16 Score=178.22 Aligned_cols=297 Identities=17% Similarity=0.195 Sum_probs=184.2
Q ss_pred hhhhhhHhhHHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCCh
Q 005595 151 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 230 (689)
Q Consensus 151 Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~ 230 (689)
.=.+||.++-.. +..|.+. +.. ..++++|+|||+++++. -++|.. .....+|||+|-..
T Consensus 125 ea~~fgy~~~~~-i~~~~~~-----~~~-~~~dViH~HeWm~g~a~-~~lK~~-------------~~~VptVfTtHAT~ 183 (590)
T cd03793 125 DAIIFGFLVAWF-LGEFAEQ-----FDD-EPAVVAHFHEWQAGVGL-PLLRKR-------------KVDVSTIFTTHATL 183 (590)
T ss_pred HHHHHHHHHHHH-HHHHHhh-----ccC-CCCeEEEEcchhHhHHH-HHHHHh-------------CCCCCEEEEecccc
Confidence 445688776543 2233222 111 47899999999999995 445531 14567999999333
Q ss_pred h-----hhhhhchHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceee
Q 005595 231 P-----EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNG 305 (689)
Q Consensus 231 ~-----~g~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNg 305 (689)
. +|...+ ...| ..+..|.+ -.+.+| ..+..|=..+...|+.+++
T Consensus 184 ~GR~l~~g~~~~-----y~~l-------------------~~~~~d~e-A~~~~I------~~r~~iE~~aa~~Ad~ftt 232 (590)
T cd03793 184 LGRYLCAGNVDF-----YNNL-------------------DYFDVDKE-AGKRGI------YHRYCIERAAAHCAHVFTT 232 (590)
T ss_pred cccccccCCccc-----chhh-------------------hhcchhhh-hhcccc------hHHHHHHHHHHhhCCEEEE
Confidence 1 121000 0000 01111111 001111 1144566789999999999
Q ss_pred ehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHH
Q 005595 306 VAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAE 385 (689)
Q Consensus 306 VS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~ 385 (689)
||+.-+++++. +.+.-|++ =|-|||+...|- +. .+
T Consensus 233 VS~it~~E~~~-----Ll~~~pd~--ViPNGid~~~f~-----~~---------------------------~e------ 267 (590)
T cd03793 233 VSEITAYEAEH-----LLKRKPDV--VLPNGLNVKKFS-----AL---------------------------HE------ 267 (590)
T ss_pred CChHHHHHHHH-----HhCCCCCE--EeCCCcchhhcc-----cc---------------------------hh------
Confidence 99998888873 33444565 456999998882 21 11
Q ss_pred HHHHHHHHHHHHHHHHHHHh-C-CcCCCCCeeEee-cccchh-hhhhhhhhhhHHHHHHHHhhcCccccCCCCCe-EEEE
Q 005595 386 WESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMI 460 (689)
Q Consensus 386 ~~~~K~~~K~~L~~~i~~~~-g-~~~~p~~l~~~~-vrR~~e-yKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~-q~If 460 (689)
+...|..+|+++.++++.++ | ..++|+.+++.| +.|+.- .||.|+ ++..+.|+.+.+....+ +.+=+ -+||
T Consensus 268 ~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~~~~~---~~tVvafii~ 343 (590)
T cd03793 268 FQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLKVEGS---DTTVVAFFIM 343 (590)
T ss_pred hhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHHhcCC---CCeEEEEEEe
Confidence 44678899999999875432 2 245677777777 799987 999999 99999999975541111 11112 2345
Q ss_pred EecCC-------cCCHHHHHHHHHHHHHHhhhcCC--------------------------------------c------
Q 005595 461 GGKAF-------ATYTNAKRIVKLVNDVGEVVNTD--------------------------------------P------ 489 (689)
Q Consensus 461 ~GKa~-------P~y~~aK~iIk~i~~~a~~in~d--------------------------------------p------ 489 (689)
-++.. -+...-|++-.-+.+++++|.+. |
T Consensus 344 p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~ 423 (590)
T cd03793 344 PAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNM 423 (590)
T ss_pred cCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecC
Confidence 55432 11222233333333332222221 1
Q ss_pred -------------------CCCCcceEEEEcCC--------CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCce
Q 005595 490 -------------------EVNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 542 (689)
Q Consensus 490 -------------------~~~~~lkVvF~enY--------~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l 542 (689)
.-.++.||+|+|.| +++ -..+++|||+++.||+ +|+.|..-+-||.-|++
T Consensus 424 ~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~-y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~P 500 (590)
T cd03793 424 VDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLD-YEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIP 500 (590)
T ss_pred CcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcc-hHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCC
Confidence 12457899999987 554 3456899999999999 99999999999999999
Q ss_pred EeeecCchh
Q 005595 543 IIGTLDGAN 551 (689)
Q Consensus 543 ~lstlDG~~ 551 (689)
.|+|--+.-
T Consensus 501 vI~t~~~gf 509 (590)
T cd03793 501 SITTNLSGF 509 (590)
T ss_pred EEEccCcch
Confidence 999877543
No 21
>PLN00142 sucrose synthase
Probab=99.69 E-value=2.1e-15 Score=177.07 Aligned_cols=194 Identities=12% Similarity=0.087 Sum_probs=143.3
Q ss_pred HhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC-CcC---CHHHHHHHHHHH
Q 005595 404 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FAT---YTNAKRIVKLVN 479 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa-~P~---y~~aK~iIk~i~ 479 (689)
++|...+++.++++++.|+..+|+.+. ++..+.++.++. ..++++++|.+ +|. +...++.++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~----------~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR----------ELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC----------CCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 567655788899999999999999999 888887765531 14788888766 442 233334455666
Q ss_pred HHHhhhcCCcCCCCcceEEEEcC---C--CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHH
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 554 (689)
Q Consensus 480 ~~a~~in~dp~~~~~lkVvF~en---Y--~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi 554 (689)
++++.+ .+.+ +|.|+.. + +.++.+.+..++|++++||+ +|++|++-+-||..|.+.|+|..|...|+
T Consensus 633 ~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 666643 3567 7888742 2 24566666668999999999 99999999999999999999988888777
Q ss_pred HHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChH
Q 005595 555 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 634 (689)
Q Consensus 555 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~ 634 (689)
++. |+|||++- +.+.+++.++|.
T Consensus 705 V~d--G~tG~LV~-------------------------------------P~D~eaLA~aI~------------------ 727 (815)
T PLN00142 705 IVD--GVSGFHID-------------------------------------PYHGDEAANKIA------------------ 727 (815)
T ss_pred hcC--CCcEEEeC-------------------------------------CCCHHHHHHHHH------------------
Confidence 655 45666553 223556666664
Q ss_pred HHHHHHHHH-HHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 005595 635 SYLEAQDRV-DQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 680 (689)
Q Consensus 635 sY~~aq~~~-~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~i 680 (689)
++ ..++.|++.|.+|..++.... ..|||++++++|.+-+
T Consensus 728 -------~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 728 -------DFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 33 346789999999999987765 4899999999988643
No 22
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.60 E-value=3.3e-14 Score=170.21 Aligned_cols=335 Identities=13% Similarity=0.116 Sum_probs=203.5
Q ss_pred CCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHHH
Q 005595 181 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 260 (689)
Q Consensus 181 ~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~ 260 (689)
.|++||.|+|+++.+. .+++.. ....+|||.|++. -+++ ++++.
T Consensus 310 ~pDvIHaHyw~sG~aa-~~L~~~--------------lgVP~V~T~HSLg---r~K~-----~~ll~------------- 353 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSA-ALLSGA--------------LNVPMVLTGHSLG---RDKL-----EQLLK------------- 353 (1050)
T ss_pred CCCEEEECcchHHHHH-HHHHHh--------------hCCCEEEECccch---hhhh-----hhhcc-------------
Confidence 3899999999999995 455543 2356999999973 3222 11110
Q ss_pred HHHHHHhcC-CCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhh---------------
Q 005595 261 IAMVRSTRS-DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVS--------------- 324 (689)
Q Consensus 261 ~~~~~~~~~-~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~--------------- 324 (689)
-| .+++.+...- .. ..++..-.+++..|+.|-++|+--.+.+. ..|.++..
T Consensus 354 -------~g~~~~~~~~~~y--~~---~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~-~lY~~~~~~~~~~~~~~~~~gv~ 420 (1050)
T TIGR02468 354 -------QGRMSKEEINSTY--KI---MRRIEAEELSLDASEIVITSTRQEIEEQW-GLYDGFDVILERKLRARARRGVS 420 (1050)
T ss_pred -------ccccccccccccc--ch---HHHHHHHHHHHHhcCEEEEeCHHHHHHHH-HHhccCCchhhhhhhhhhccccc
Confidence 01 0111110000 00 01345556789999999999987665543 34543331
Q ss_pred ---hcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 005595 325 ---LWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYI 401 (689)
Q Consensus 325 ---l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i 401 (689)
.+..++.=|-|||+..++. |.-...-....| + +... ...++.. | . .+
T Consensus 421 ~~g~~~~ri~VIPpGVD~~~F~----P~~~~~~~~~~~---~-------~~~~-~~~~~~~---~----~----~l---- 470 (1050)
T TIGR02468 421 CYGRFMPRMAVIPPGMEFSHIV----PHDGDMDGETEG---N-------EEHP-AKPDPPI---W----S----EI---- 470 (1050)
T ss_pred ccccCCCCeEEeCCCCcHHHcc----CCCccccchhcc---c-------cccc-ccccchh---h----H----HH----
Confidence 1233888899999999993 421110000000 0 0000 0011111 1 0 11
Q ss_pred HHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHH---HHHHHHHH
Q 005595 402 WRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLV 478 (689)
Q Consensus 402 ~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~---aK~iIk~i 478 (689)
+ +++ .+|+.+++.+|.|+.+.|+.+. ++..+.++.++.. ...+++ ++|.+...+.. .....+.+
T Consensus 471 ~-r~~--~~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~--------~~nL~L-IiG~gdd~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 471 M-RFF--TNPRKPMILALARPDPKKNITT-LVKAFGECRPLRE--------LANLTL-IMGNRDDIDEMSSGSSSVLTSV 537 (1050)
T ss_pred H-hhc--ccCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc--------CCCEEE-EEecCchhhhhhccchHHHHHH
Confidence 1 233 2588899999999999999999 9998888765422 013554 45654322221 12223344
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCC-CHHHHHhhccCc----ccccccCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 005595 479 NDVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 479 ~~~a~~in~dp~~~~~lkVvF~enY-~~~lA~~l~~g~----Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
..+++.+ .+.+ +|.|.--- ...++. ++..| |++.+||+ +|+-|+.-+-||..|.+.|+|..|+..|
T Consensus 538 ~~li~~l----gL~g--~V~FlG~v~~edvp~-lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~E 608 (1050)
T TIGR02468 538 LKLIDKY----DLYG--QVAYPKHHKQSDVPD-IYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVD 608 (1050)
T ss_pred HHHHHHh----CCCC--eEEecCCCCHHHHHH-HHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHH
Confidence 4455443 3566 77776432 334444 44444 89999999 9999999999999999999999999888
Q ss_pred HHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCCh
Q 005595 554 IRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDF 633 (689)
Q Consensus 554 i~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df 633 (689)
+++. ++||++|-. .|.++|.++|.
T Consensus 609 II~~--g~nGlLVdP-------------------------------------~D~eaLA~AL~----------------- 632 (1050)
T TIGR02468 609 IHRV--LDNGLLVDP-------------------------------------HDQQAIADALL----------------- 632 (1050)
T ss_pred Hhcc--CCcEEEECC-------------------------------------CCHHHHHHHHH-----------------
Confidence 7765 467766532 23455555443
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005595 634 PSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 683 (689)
Q Consensus 634 ~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw~~ 683 (689)
.+..|++.|.+|..++......|||++++++|.+.+=.+
T Consensus 633 -----------~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 633 -----------KLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred -----------HHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 345688899999888776555799999999999876544
No 23
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.60 E-value=1.2e-13 Score=154.04 Aligned_cols=256 Identities=19% Similarity=0.191 Sum_probs=160.4
Q ss_pred cchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhh
Q 005595 290 VRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDL 369 (689)
Q Consensus 290 vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~ 369 (689)
+.+-..++..++.|-+||+-..+.. +..+..+-|.++.-|.|||+...+ .|.-.
T Consensus 175 ~~~~~~~~~~ad~ii~~s~~~~~~~----~~~~~~~~~~ki~vIpnGvd~~~f----~~~~~------------------ 228 (439)
T TIGR02472 175 IEAEEETLAHASLVITSTHQEIEEQ----YALYDSYQPERMQVIPPGVDLSRF----YPPQS------------------ 228 (439)
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHH----HHhccCCCccceEEECCCcChhhc----CCCCc------------------
Confidence 3445667888999999886322111 111123346789999999998887 33210
Q ss_pred HhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccc
Q 005595 370 LVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 449 (689)
Q Consensus 370 l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~ 449 (689)
+ ..+...+..+. +.+. .++.++++++.|+.+.|+.++ ++..+.++.++..
T Consensus 229 ---------~--------~~~~~~~~~~~-----~~~~--~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~----- 278 (439)
T TIGR02472 229 ---------S--------EETSEIDNLLA-----PFLK--DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE----- 278 (439)
T ss_pred ---------c--------ccchhHHHHHH-----hhcc--ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh-----
Confidence 0 00011222221 3332 466789999999999999999 9998876544322
Q ss_pred cCCCCCeEEEEEecCCcCCH---HHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCc----ccccccC
Q 005595 450 RKKTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHIS 522 (689)
Q Consensus 450 ~~~~~p~q~If~GKa~P~y~---~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~----Dv~l~~s 522 (689)
.+.-++++|.+..... ..++..+.+..+++.+ .+.+ +|.|+....-+-...++++| |+++.||
T Consensus 279 ----~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~----~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS 348 (439)
T TIGR02472 279 ----MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRY----DLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPA 348 (439)
T ss_pred ----hccEEEEeCCccccccccHHHHHHHHHHHHHHHHc----CCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEeccc
Confidence 1222346776543221 2223344444555433 3567 78887654443344555544 9999999
Q ss_pred CCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCC
Q 005595 523 TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA 602 (689)
Q Consensus 523 ~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~ 602 (689)
+ .|+.|++-+-||..|.+.|+|..|...|+++. ++|||++-
T Consensus 349 ~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~~G~lv~----------------------------------- 389 (439)
T TIGR02472 349 L--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CRNGLLVD----------------------------------- 389 (439)
T ss_pred c--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CCcEEEeC-----------------------------------
Confidence 9 99999999999999999999988887776643 35565542
Q ss_pred CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 005595 603 FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 680 (689)
Q Consensus 603 f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~i 680 (689)
+.|.++|.++|. .+..|++.|.+|..++-+.. ..|||++++++|.+-+
T Consensus 390 --~~d~~~la~~i~----------------------------~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 390 --VLDLEAIASALE----------------------------DALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred --CCCHHHHHHHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 223455554443 33457777777777664432 3899999999998643
No 24
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.59 E-value=9.6e-14 Score=149.84 Aligned_cols=243 Identities=18% Similarity=0.188 Sum_probs=164.4
Q ss_pred hchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhh
Q 005595 293 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 372 (689)
Q Consensus 293 ~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 372 (689)
...++..++.|.+||+-..+.++. .|+ .+-+.++.-|.||++...| .|.
T Consensus 138 ~~~~~~~ad~vi~~S~~~~~~~~~-~~~---~~~~~~i~vi~ng~~~~~~----~~~----------------------- 186 (388)
T TIGR02149 138 EKTAIEAADRVIAVSGGMREDILK-YYP---DLDPEKVHVIYNGIDTKEY----KPD----------------------- 186 (388)
T ss_pred HHHHHhhCCEEEEccHHHHHHHHH-HcC---CCCcceEEEecCCCChhhc----CCC-----------------------
Confidence 455677899999999987765553 222 2235678888999998877 221
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCC
Q 005595 373 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKK 452 (689)
Q Consensus 373 l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~ 452 (689)
+. ..+ ++++|+ +++.+.++++.|+..+|+.++ ++..+.++..
T Consensus 187 -----~~---------------~~~----~~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~~----------- 228 (388)
T TIGR02149 187 -----DG---------------NVV----LDRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIPK----------- 228 (388)
T ss_pred -----ch---------------HHH----HHHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHhh-----------
Confidence 00 001 134554 467789999999999999999 8888776532
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 453 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 453 ~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
+.++++.|.+....+....+.+.+..+.. -.+ +|+|+.+ ++.+-...++++||+++.||+ .|+.|+
T Consensus 229 --~~~l~i~g~g~~~~~~~~~~~~~~~~~~~-------~~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~ 295 (388)
T TIGR02149 229 --DVQVVLCAGAPDTPEVAEEVRQAVALLDR-------NRT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGI 295 (388)
T ss_pred --cCcEEEEeCCCCcHHHHHHHHHHHHHhcc-------ccC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCCh
Confidence 45777776554433322223333332221 012 4788765 567777888999999999999 899999
Q ss_pred chhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHH
Q 005595 532 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPL 611 (689)
Q Consensus 532 s~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l 611 (689)
+.+-||..|.+.|+|..|...|+++. +.||+++-....+... ..++|
T Consensus 296 ~~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~~~~~~~~~-------------------------------~~~~l 342 (388)
T TIGR02149 296 VNLEAMACGTPVVASATGGIPEVVVD--GETGFLVPPDNSDADG-------------------------------FQAEL 342 (388)
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcCCCCCcccc-------------------------------hHHHH
Confidence 99999999999999999988877764 4677776432111100 02333
Q ss_pred HHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005595 612 LDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 678 (689)
Q Consensus 612 ~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~ 678 (689)
.+.| ..+..|++.+.+|..++.... ..|||+.++++|.+
T Consensus 343 ~~~i----------------------------~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 382 (388)
T TIGR02149 343 AKAI----------------------------NILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVE 382 (388)
T ss_pred HHHH----------------------------HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3333 334578888888888776543 37999999999875
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.51 E-value=3.3e-12 Score=139.41 Aligned_cols=241 Identities=15% Similarity=0.152 Sum_probs=160.5
Q ss_pred hhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhh
Q 005595 295 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 374 (689)
Q Consensus 295 lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~ 374 (689)
..+..++.|.++|+...+.+... .+..+.++.-|.|||+...|. |.
T Consensus 159 ~~~~~~d~vi~~s~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~~----~~------------------------- 204 (405)
T TIGR03449 159 QLVDNADRLIANTDEEARDLVRH-----YDADPDRIDVVAPGADLERFR----PG------------------------- 204 (405)
T ss_pred HHHHhcCeEEECCHHHHHHHHHH-----cCCChhhEEEECCCcCHHHcC----CC-------------------------
Confidence 34667899999999777655421 233456788899999987772 21
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCC
Q 005595 375 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 454 (689)
Q Consensus 375 ~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~ 454 (689)
+. - .. ++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+- .|+ .
T Consensus 205 ---~~------~-~~------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~~---~~~-----~ 251 (405)
T TIGR03449 205 ---DR------A-TE------------RARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLDR---DPD-----R 251 (405)
T ss_pred ---cH------H-HH------------HHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHhh---CCC-----c
Confidence 00 0 00 124454 356788999999999999999 98988887541 111 2
Q ss_pred CeEEEEEecCCc-CCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 005595 455 PRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 533 (689)
Q Consensus 455 p~q~If~GKa~P-~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~ 533 (689)
.++++++|.+.+ +...-.+ +.++++.. .+.+ +|.|+..-.-+-...++++||++++||+ .|..|++-
T Consensus 252 ~~~l~ivG~~~~~g~~~~~~----l~~~~~~~----~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~ 319 (405)
T TIGR03449 252 NLRVIVVGGPSGSGLATPDA----LIELAAEL----GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVA 319 (405)
T ss_pred ceEEEEEeCCCCCcchHHHH----HHHHHHHc----CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHH
Confidence 489999996543 2122222 33333322 2345 6888765455555678999999999999 89999999
Q ss_pred hHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHH
Q 005595 534 MKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLD 613 (689)
Q Consensus 534 Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~ 613 (689)
+-||..|.+.|+|..|+..|++++ +.+||++. +.|.+++.+
T Consensus 320 lEAma~G~Pvi~~~~~~~~e~i~~--~~~g~~~~-------------------------------------~~d~~~la~ 360 (405)
T TIGR03449 320 MEAQACGTPVVAARVGGLPVAVAD--GETGLLVD-------------------------------------GHDPADWAD 360 (405)
T ss_pred HHHHHcCCCEEEecCCCcHhhhcc--CCceEECC-------------------------------------CCCHHHHHH
Confidence 999999999999988877665543 34444432 223455555
Q ss_pred HHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 614 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 614 ~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
+|. ++ ..+++.+.+|..++......|||++++++|.+-..
T Consensus 361 ~i~-------------------------~~---l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~ 400 (405)
T TIGR03449 361 ALA-------------------------RL---LDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYR 400 (405)
T ss_pred HHH-------------------------HH---HhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 554 33 34677777776665544447999999999986443
No 26
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.41 E-value=2.3e-11 Score=137.26 Aligned_cols=235 Identities=16% Similarity=0.152 Sum_probs=162.7
Q ss_pred chhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhH
Q 005595 291 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 370 (689)
Q Consensus 291 nm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 370 (689)
.+...++..|+.|.+||+-..+.... + +..++|+.-|.|||+...+- |.
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~--~----g~~~~ki~vIpNgid~~~f~----~~--------------------- 284 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIE--D----GADPEKIRVIPNGIDPERFA----PA--------------------- 284 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHH--c----CCCHHHeEEeCCCcCHHHcC----Cc---------------------
Confidence 45667888999999999976665432 1 23356788899999976661 10
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCcccc
Q 005595 371 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 450 (689)
Q Consensus 371 ~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~ 450 (689)
.. . ...++.+.++++.|+...|+.+. +++.+..+.+- .
T Consensus 285 -------~~--------~-------------------~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~---- 322 (475)
T cd03813 285 -------RR--------A-------------------RPEKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRKK---I---- 322 (475)
T ss_pred -------cc--------c-------------------ccCCCCcEEEEEeccccccCHHH-HHHHHHHHHHh---C----
Confidence 00 0 01245689999999999999999 88888877652 1
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCC
Q 005595 451 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 530 (689)
Q Consensus 451 ~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasG 530 (689)
..++++++|.+.......+ .+.++++.. .+.+ +|.|+. ...+. .+++++|+++.||+ .|++|
T Consensus 323 ---p~~~l~IvG~g~~~~~~~~----e~~~li~~l----~l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p 384 (475)
T cd03813 323 ---PDAEGWVIGPTDEDPEYAE----ECRELVESL----GLED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQP 384 (475)
T ss_pred ---CCeEEEEECCCCcChHHHH----HHHHHHHHh----CCCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCC
Confidence 2589999998853333332 334444332 2445 788877 44454 56789999999999 89999
Q ss_pred cchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChH
Q 005595 531 TSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYN 609 (689)
Q Consensus 531 Ts~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~ 609 (689)
++-+-||..|.+.|+|-.|...|+++..+.+ .|| .+|. +.+.|.+
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~---~~g-------------------------------~~G~lv~~~d~~ 430 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDE---ALG-------------------------------PAGEVVPPADPE 430 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCccc---ccC-------------------------------CceEEECCCCHH
Confidence 9999999999999999888877766553211 111 1221 3334466
Q ss_pred HHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005595 610 PLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 678 (689)
Q Consensus 610 ~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~ 678 (689)
++.++|. .+..|++.|.+|..++.+.. ..|||++++++|.+
T Consensus 431 ~la~ai~----------------------------~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 431 ALARAIL----------------------------RLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHHHH----------------------------HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6666554 34678888999888876544 38999999999976
No 27
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.40 E-value=1.3e-11 Score=135.48 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=91.1
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++.+.++++.|+..+|+.++ ++..+..+.+- + .+.+++++|.+. .... +.++.+.. .
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~~---~-------~~~~l~i~G~g~-~~~~-------l~~~~~~~----~ 247 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDL-LVGIIPEICKK---H-------PNVRFIIGGDGP-KRIL-------LEEMREKY----N 247 (398)
T ss_pred CCceEEEEEeccchhcCHHH-HHHHHHHHHhh---C-------CCEEEEEEeCCc-hHHH-------HHHHHHHh----C
Confidence 56788999999999999999 88888776541 1 268999999864 2222 22223221 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
+.+ +|.|+...+-+-...++++||+++.||+ .|++|++-+-||..|.+.|+|..|+.-|+++
T Consensus 248 l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~ 309 (398)
T cd03796 248 LQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLP 309 (398)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhhee
Confidence 455 7888866666677778899999999999 8999999999999999999997777666554
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.32 E-value=1.6e-10 Score=124.32 Aligned_cols=239 Identities=14% Similarity=0.134 Sum_probs=162.3
Q ss_pred chhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhh
Q 005595 294 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 373 (689)
Q Consensus 294 ~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 373 (689)
...+..++.+-++|....+.+... + ...+.++.-|.||++...|. |..
T Consensus 158 ~~~~~~ad~ii~~s~~~~~~~~~~-~----~~~~~~~~vi~ng~~~~~~~----~~~----------------------- 205 (398)
T cd03800 158 ERLLRAADRVIASTPQEAEELYSL-Y----GAYPRRIRVVPPGVDLERFT----PYG----------------------- 205 (398)
T ss_pred HHHHhhCCEEEEcCHHHHHHHHHH-c----cccccccEEECCCCCcccee----ccc-----------------------
Confidence 445678999999999877665532 1 22234577889999987772 211
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCC
Q 005595 374 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 453 (689)
Q Consensus 374 ~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~ 453 (689)
.+ . .. ++..+. .++.+.++++.|+..+|+.++ ++..+.++.+..
T Consensus 206 ----~~------~-~~------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~~---------- 249 (398)
T cd03800 206 ----RA------E-AR------------RARLLR--DPDKPRILAVGRLDPRKGIDT-LIRAYAELPELR---------- 249 (398)
T ss_pred ----ch------h-hH------------HHhhcc--CCCCcEEEEEcccccccCHHH-HHHHHHHHHHhC----------
Confidence 00 0 00 112232 356688999999999999998 988888876531
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 005595 454 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 533 (689)
Q Consensus 454 ~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~ 533 (689)
.++++++.|.+...+.... ...+..+++.. ...+ +|.|+.-.+.+-...+++.||+++.||. .|++|++-
T Consensus 250 ~~~~l~i~G~~~~~~~~~~--~~~~~~~~~~~----~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l 319 (398)
T cd03800 250 ERANLVIVGGPRDDILAMD--EEELRELAREL----GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTA 319 (398)
T ss_pred CCeEEEEEECCCCcchhhh--hHHHHHHHHhc----CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHH
Confidence 2578999987765543221 11233334322 2334 6888887777777788889999999999 89999999
Q ss_pred hHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHH
Q 005595 534 MKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLD 613 (689)
Q Consensus 534 Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~ 613 (689)
+-||..|.+.|++-.|+.-|++++. ++|+++. +.+.+++.+
T Consensus 320 ~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~~-------------------------------------~~~~~~l~~ 360 (398)
T cd03800 320 LEAMACGLPVVATAVGGPRDIVVDG--VTGLLVD-------------------------------------PRDPEALAA 360 (398)
T ss_pred HHHHhcCCCEEECCCCCHHHHccCC--CCeEEeC-------------------------------------CCCHHHHHH
Confidence 9999999999998877766555431 3344331 223455555
Q ss_pred HHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005595 614 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 677 (689)
Q Consensus 614 ~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~ 677 (689)
.|. .+..+++.+.+|..++.... ..|||+..+++|.
T Consensus 361 ~i~----------------------------~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 361 ALR----------------------------RLLTDPALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 443 34567888888888877654 5899999999986
No 29
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.30 E-value=2.4e-10 Score=122.05 Aligned_cols=232 Identities=16% Similarity=0.214 Sum_probs=153.6
Q ss_pred hhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHh
Q 005595 292 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 371 (689)
Q Consensus 292 m~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 371 (689)
+...++..++.+.++|+--.+.+++. + ..+.++.-|.||++..... |.
T Consensus 135 ~~~~~~~~~d~ii~~s~~~~~~~~~~-~-----~~~~~i~vi~n~~~~~~~~----~~---------------------- 182 (371)
T cd04962 135 ATRFSIEKSDGVTAVSESLRQETYEL-F-----DITKEIEVIPNFVDEDRFR----PK---------------------- 182 (371)
T ss_pred HHHHHHhhCCEEEEcCHHHHHHHHHh-c-----CCcCCEEEecCCcCHhhcC----CC----------------------
Confidence 44556778999999999877666532 2 1245677888998864331 10
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccC
Q 005595 372 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 451 (689)
Q Consensus 372 ~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~ 451 (689)
.+. .. +++.+. .++..+++++.|+..+|+.+. ++..+.++.+-
T Consensus 183 ------~~~-------~~------------~~~~~~--~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~~--------- 225 (371)
T cd04962 183 ------PDE-------AL------------KRRLGA--PEGEKVLIHISNFRPVKRIDD-VIRIFAKVRKE--------- 225 (371)
T ss_pred ------chH-------HH------------HHhcCC--CCCCeEEEEecccccccCHHH-HHHHHHHHHhc---------
Confidence 010 00 123443 467788999999999999999 88887776431
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
.|.++++.|.+.. ... +.+.++.. .+.+ +|.|+. +...+ ..++++||++++||+ .|+.|+
T Consensus 226 --~~~~l~i~G~g~~-~~~-------~~~~~~~~----~~~~--~v~~~g-~~~~~-~~~~~~~d~~v~ps~--~E~~~~ 285 (371)
T cd04962 226 --VPARLLLVGDGPE-RSP-------AERLAREL----GLQD--DVLFLG-KQDHV-EELLSIADLFLLPSE--KESFGL 285 (371)
T ss_pred --CCceEEEEcCCcC-HHH-------HHHHHHHc----CCCc--eEEEec-CcccH-HHHHHhcCEEEeCCC--cCCCcc
Confidence 3689999998742 221 22333322 2345 677776 44344 466899999999998 999999
Q ss_pred chhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHH
Q 005595 532 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPL 611 (689)
Q Consensus 532 s~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l 611 (689)
+-+-||..|.+.|+|-.|..-|++++ +.|||+| .+.+.+++
T Consensus 286 ~~~EAma~g~PvI~s~~~~~~e~i~~--~~~G~~~-------------------------------------~~~~~~~l 326 (371)
T cd04962 286 AALEAMACGVPVVASNAGGIPEVVKH--GETGFLV-------------------------------------DVGDVEAM 326 (371)
T ss_pred HHHHHHHcCCCEEEeCCCCchhhhcC--CCceEEc-------------------------------------CCCCHHHH
Confidence 99999999999999877765554443 2344443 22234555
Q ss_pred HHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHH
Q 005595 612 LDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAG-SGKFSSDRTIAQYAKE 679 (689)
Q Consensus 612 ~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~-~g~FS~drti~eY~~~ 679 (689)
.+.+ ..+..+++.+.+|..++-.. ...|||+..+++|.+-
T Consensus 327 ~~~i----------------------------~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 367 (371)
T cd04962 327 AEYA----------------------------LSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEAL 367 (371)
T ss_pred HHHH----------------------------HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4433 33456788887777766554 2489999999999753
No 30
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.30 E-value=1.6e-10 Score=124.91 Aligned_cols=140 Identities=17% Similarity=0.184 Sum_probs=104.1
Q ss_pred CCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 005595 410 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 489 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp 489 (689)
.++.++++++.|+.+.|++++ ++.++.++.+-. + ...++++++.|.+.+...........+.++++.. .
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~~---~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~---~ 276 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKDKL---A----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL---L 276 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHhhc---c----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---c
Confidence 356789999999999999999 999998876521 0 0026899999998776544333334455555430 1
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
.+.+ +|.|+..........++.+||+++.+|. .|..|++-+-||..|++.|+|..|+..|++.. +.+|+++
T Consensus 277 ~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~ 347 (392)
T cd03805 277 LLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLC 347 (392)
T ss_pred CCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEe
Confidence 2445 8999988877777889999999999999 89999999999999999999977776555443 2344443
No 31
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.27 E-value=4.1e-10 Score=126.60 Aligned_cols=230 Identities=13% Similarity=0.103 Sum_probs=148.5
Q ss_pred hhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhc
Q 005595 296 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 375 (689)
Q Consensus 296 ai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 375 (689)
....++.+-++|+...+.+++. ...-+.++.-|.|||+...+ +|..
T Consensus 202 ~~~~ad~ii~~S~~~~~~l~~~-----~~~~~~kv~vi~nGvd~~~f----~p~~------------------------- 247 (465)
T PLN02871 202 LHRAADLTLVTSPALGKELEAA-----GVTAANRIRVWNKGVDSESF----HPRF------------------------- 247 (465)
T ss_pred HHhhCCEEEECCHHHHHHHHHc-----CCCCcCeEEEeCCccCcccc----CCcc-------------------------
Confidence 3457889999999877766532 11124577788899998877 3421
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCC
Q 005595 376 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 376 ~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
+..+ . +. ++.. ..++.++++++.|+..+|+.+. ++..+.++ .+
T Consensus 248 --~~~~----~-------~~--------~~~~-~~~~~~~i~~vGrl~~~K~~~~-li~a~~~~--------------~~ 290 (465)
T PLN02871 248 --RSEE----M-------RA--------RLSG-GEPEKPLIVYVGRLGAEKNLDF-LKRVMERL--------------PG 290 (465)
T ss_pred --ccHH----H-------HH--------HhcC-CCCCCeEEEEeCCCchhhhHHH-HHHHHHhC--------------CC
Confidence 1100 1 11 1111 2356789999999999999988 65544331 14
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhH
Q 005595 456 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 535 (689)
Q Consensus 456 ~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mk 535 (689)
++++|+|.+. ..+ .+.++++ .. +|.|+.--.-+-...++++||+++.||. .|..|..-+-
T Consensus 291 ~~l~ivG~G~-~~~-------~l~~~~~--------~~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlE 350 (465)
T PLN02871 291 ARLAFVGDGP-YRE-------ELEKMFA--------GT--PTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLE 350 (465)
T ss_pred cEEEEEeCCh-HHH-------HHHHHhc--------cC--CeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHH
Confidence 7899999752 111 2333332 11 5666533232445568899999999998 8999999999
Q ss_pred HhhcCceEeeecCchhHHHHHHh-cCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHH
Q 005595 536 FSLNGCLIIGTLDGANVEIRQEI-GEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDS 614 (689)
Q Consensus 536 a~~NG~l~lstlDG~~vEi~~~~-Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~ 614 (689)
||..|.+.|+|-.|...|+++.. .++||++|. +.|.+++.++
T Consensus 351 AmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~-------------------------------------~~d~~~la~~ 393 (465)
T PLN02871 351 AMASGVPVVAARAGGIPDIIPPDQEGKTGFLYT-------------------------------------PGDVDDCVEK 393 (465)
T ss_pred HHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeC-------------------------------------CCCHHHHHHH
Confidence 99999999999888877766541 134555542 2234555444
Q ss_pred HhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005595 615 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 615 l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~iw 681 (689)
|. .+..|++.+.+|..++-.....|||+++++++.+.+|
T Consensus 394 i~----------------------------~ll~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y 432 (465)
T PLN02871 394 LE----------------------------TLLADPELRERMGAAAREEVEKWDWRAATRKLRNEQY 432 (465)
T ss_pred HH----------------------------HHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 43 3345677666666665444457999999998887666
No 32
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.24 E-value=4.2e-10 Score=124.74 Aligned_cols=177 Identities=16% Similarity=0.100 Sum_probs=125.3
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
.+.++++.|+.++|+.+. ++..+.++.+- + .++++++.|.+... . .+.++.+.. .+.
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~l~~~---~-------~~~~l~ivG~G~~~----~----~l~~~~~~~----~l~ 278 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQLKEQ---G-------VAFRYRILGIGPWE----R----RLRTLIEQY----QLE 278 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHHHHhh---C-------CCEEEEEEECchhH----H----HHHHHHHHc----CCC
Confidence 356889999999999999 98888777541 1 26899999987421 1 133333322 234
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCC----ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecc
Q 005595 493 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 568 (689)
Q Consensus 493 ~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~----~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~ 568 (689)
+ +|.|..-.+-+-...++++||+++.||+.+ +|..|+.-|-||..|.+.|+|..|+..|+++. ++|||++-
T Consensus 279 ~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv~- 353 (406)
T PRK15427 279 D--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLVP- 353 (406)
T ss_pred C--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEeC-
Confidence 5 677765555455567889999999999853 58899999999999999999988887776654 35555542
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc
Q 005595 569 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 648 (689)
Q Consensus 569 ~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~ 648 (689)
+.|.++|.++|. .+..
T Consensus 354 ------------------------------------~~d~~~la~ai~----------------------------~l~~ 369 (406)
T PRK15427 354 ------------------------------------ENDAQALAQRLA----------------------------AFSQ 369 (406)
T ss_pred ------------------------------------CCCHHHHHHHHH----------------------------HHHh
Confidence 223455555443 3445
Q ss_pred -CHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 005595 649 -DQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 681 (689)
Q Consensus 649 -~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~iw 681 (689)
|++.+.+|..++-... ..|||++.++++++-+-
T Consensus 370 ~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 370 LDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8888888887765443 48999999999987553
No 33
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.23 E-value=8.3e-10 Score=125.66 Aligned_cols=127 Identities=15% Similarity=0.112 Sum_probs=95.9
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++.++++++.||++.|++.. ++..+.++.+- . .++++++.|.+... + .+.+.++.. .
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk~---~-------pdirLvIVGdG~~~-e-------eLk~la~el----g 452 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFA-WIDFAARYLQH---H-------PATRFVLVGDGDLR-A-------EAQKRAEQL----G 452 (578)
T ss_pred CCCcEEEEEEEEehhcCHHH-HHHHHHHHHhH---C-------CCeEEEEEeCchhH-H-------HHHHHHHHc----C
Confidence 55678999999999999998 87777766542 1 25899999986321 1 233333322 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecc
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 568 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~ 568 (689)
+.+ +|.|+. |...+. .+++++|+++.||+ +|+.|.+-+-||..|.+.|+|-.|+..|++++ |+|||++..
T Consensus 453 L~d--~V~FlG-~~~Dv~-~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp~ 522 (578)
T PRK15490 453 ILE--RILFVG-ASRDVG-YWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILDD 522 (578)
T ss_pred CCC--cEEECC-ChhhHH-HHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEECC
Confidence 345 677765 444554 47899999999999 99999999999999999999999999888775 688888754
No 34
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.22 E-value=9.5e-10 Score=114.75 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=94.3
Q ss_pred CCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 005595 410 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 489 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp 489 (689)
.++.+.++++.|+.+.|+.++ ++..+.++.+-. .++++++.|++.+.+... +..+++..
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~----------~~~~l~i~G~~~~~~~~~------~~~~~~~~---- 258 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDL-LIEAFAKLAERF----------PDWHLVIAGPDEGGYRAE------LKQIAAAL---- 258 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhhc----------CCeEEEEECCCCcchHHH------HHHHHHhc----
Confidence 356789999999999999999 988888876521 268999999988776653 22222221
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 557 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~ 557 (689)
...+ +|.|+...+-+--..++..||++++||+ .|.+|++-+-||..|.+.|++-.|+..|++..
T Consensus 259 ~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~ 322 (375)
T cd03821 259 GLED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIEY 322 (375)
T ss_pred Cccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc
Confidence 2345 6888777665556667888999999999 79999999999999999999877776555443
No 35
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.21 E-value=3.7e-10 Score=118.61 Aligned_cols=282 Identities=16% Similarity=0.122 Sum_probs=185.9
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHH
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+||+||++.+.+.+. + ..+..++++.|.+.+.....+........
T Consensus 84 ~~~Dii~~~~~~~~~~-----~---------------~~~~~~i~~~hd~~~~~~~~~~~~~~~~~-------------- 129 (365)
T cd03809 84 LGLDLLHSPHNTAPLL-----R---------------LRGVPVVVTIHDLIPLRFPEYFSPGFRRY-------------- 129 (365)
T ss_pred cCCCeeeecccccCcc-----c---------------CCCCCEEEEeccchhhhCcccCCHHHHHH--------------
Confidence 5889999999998875 1 14567999999876654321111110000
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCc
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 339 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~ 339 (689)
.-.+...++..++.+.++|+-..+.+.+. ....+.++.-+.||++.
T Consensus 130 -----------------------------~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-----~~~~~~~~~vi~~~~~~ 175 (365)
T cd03809 130 -----------------------------FRRLLRRALRRADAIITVSEATKRDLLRY-----LGVPPDKIVVIPLGVDP 175 (365)
T ss_pred -----------------------------HHHHHHHHHHHcCEEEEccHHHHHHHHHH-----hCcCHHHEEeeccccCc
Confidence 11334456678899999999777766532 22234567788899987
Q ss_pred ccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeec
Q 005595 340 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 419 (689)
Q Consensus 340 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~v 419 (689)
..+. +. .+ +. + ...+. .++.+.++++
T Consensus 176 ~~~~----~~----------------------------~~--------~~----~--------~~~~~--~~~~~~i~~~ 201 (365)
T cd03809 176 RFRP----PP----------------------------AE--------AE----V--------LRALY--LLPRPYFLYV 201 (365)
T ss_pred cccC----CC----------------------------ch--------HH----H--------HHHhc--CCCCCeEEEe
Confidence 7662 10 11 00 0 11111 3456789999
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 005595 420 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 499 (689)
Q Consensus 420 rR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF 499 (689)
.|+..+|+.++ ++..+..+.+- + .++++++.|.+.+.+......+ .+. ...+ +|.|
T Consensus 202 G~~~~~K~~~~-~l~~~~~~~~~---~-------~~~~l~i~G~~~~~~~~~~~~~---~~~--------~~~~--~v~~ 257 (365)
T cd03809 202 GTIEPRKNLER-LLEAFARLPAK---G-------PDPKLVIVGKRGWLNEELLARL---REL--------GLGD--RVRF 257 (365)
T ss_pred CCCccccCHHH-HHHHHHHHHHh---c-------CCCCEEEecCCccccHHHHHHH---HHc--------CCCC--eEEE
Confidence 99999999999 88888777552 1 2589999999887777643222 111 2344 7888
Q ss_pred EcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhh
Q 005595 500 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 579 (689)
Q Consensus 500 ~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~ 579 (689)
+...+.+-...+++.||+.+.||+ .|..|++-+-||..|.+.|++.-|+..|++ ++++++
T Consensus 258 ~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~----~~~~~~-------------- 317 (365)
T cd03809 258 LGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVA----GDAALY-------------- 317 (365)
T ss_pred CCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCcccee----cCceee--------------
Confidence 877777777888999999999999 899999999999999999987555543322 111111
Q ss_pred ccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 005595 580 REDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSIL 659 (689)
Q Consensus 580 ~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~ 659 (689)
+.+.+.+++.+.|. .+..|++...++..+
T Consensus 318 -----------------------~~~~~~~~~~~~i~----------------------------~l~~~~~~~~~~~~~ 346 (365)
T cd03809 318 -----------------------FDPLDPEALAAAIE----------------------------RLLEDPALREELRER 346 (365)
T ss_pred -----------------------eCCCCHHHHHHHHH----------------------------HHhcCHHHHHHHHHH
Confidence 22233555555443 235677777777777
Q ss_pred HhccCCCCChHHHHHHHHH
Q 005595 660 STAGSGKFSSDRTIAQYAK 678 (689)
Q Consensus 660 ~ma~~g~FS~drti~eY~~ 678 (689)
+.+....|||++++++|.+
T Consensus 347 ~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 347 GLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHhCCHHHHHHHHhC
Confidence 6444458999999999863
No 36
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.19 E-value=1e-09 Score=116.08 Aligned_cols=188 Identities=18% Similarity=0.231 Sum_probs=127.4
Q ss_pred cCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCC
Q 005595 299 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 378 (689)
Q Consensus 299 ~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~ 378 (689)
.++.+-++|+...+.+++. .++-+.++.-|-|||+...+ .+.. ..
T Consensus 124 ~~~~vi~~s~~~~~~~~~~-----~~~~~~k~~~i~ngi~~~~~----~~~~--------------------------~~ 168 (355)
T cd03819 124 RGDRVIAVSNFIADHIREN-----YGVDPDRIRVIPRGVDLDRF----DPGA--------------------------VP 168 (355)
T ss_pred hcCEEEEeCHHHHHHHHHh-----cCCChhhEEEecCCcccccc----Cccc--------------------------cc
Confidence 4678889999877777632 23334678888999998776 2210 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEE
Q 005595 379 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 458 (689)
Q Consensus 379 d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~ 458 (689)
+. .+ .. ++++.+. .++.+.++++.|+..+|+.+. ++..+..+.+.. .++++
T Consensus 169 ~~----~~--------~~----~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~~----------~~~~l 219 (355)
T cd03819 169 PE----RI--------LA----LAREWPL--PKGKPVILLPGRLTRWKGQEV-FIEALARLKKDD----------PDVHL 219 (355)
T ss_pred hH----HH--------HH----HHHHcCC--CCCceEEEEeeccccccCHHH-HHHHHHHHHhcC----------CCeEE
Confidence 10 01 00 2234453 467789999999999999999 888888775521 26899
Q ss_pred EEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccC-CCCccCCCcchhHHh
Q 005595 459 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS-TAGMEASGTSNMKFS 537 (689)
Q Consensus 459 If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s-~~~~EasGTs~Mka~ 537 (689)
++.|.+.+.....+.+.+.+.+.. ..+ +|.|+.. ...++ .++++||++++|| . .|..|++-+-||
T Consensus 220 ~ivG~~~~~~~~~~~~~~~~~~~~--------~~~--~v~~~g~-~~~~~-~~l~~ad~~i~ps~~--~e~~~~~l~EA~ 285 (355)
T cd03819 220 LIVGDAQGRRFYYAELLELIKRLG--------LQD--RVTFVGH-CSDMP-AAYALADIVVSASTE--PEAFGRTAVEAQ 285 (355)
T ss_pred EEEECCcccchHHHHHHHHHHHcC--------Ccc--eEEEcCC-cccHH-HHHHhCCEEEecCCC--CCCCchHHHHHH
Confidence 999998776554433333333222 234 5666655 33454 6678899999999 6 799999999999
Q ss_pred hcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 538 LNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 538 ~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
..|.+.|++..|+..|++.. +.+|+++
T Consensus 286 a~G~PvI~~~~~~~~e~i~~--~~~g~~~ 312 (355)
T cd03819 286 AMGRPVIASDHGGARETVRP--GETGLLV 312 (355)
T ss_pred hcCCCEEEcCCCCcHHHHhC--CCceEEe
Confidence 99999999988887666654 2355555
No 37
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.17 E-value=4.1e-09 Score=110.75 Aligned_cols=178 Identities=12% Similarity=0.084 Sum_probs=123.7
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHH-HHHHHHHHhhhcCCc
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 489 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~i-Ik~i~~~a~~in~dp 489 (689)
++.+.++++.|+.++|+.++ ++..+.++.+- + .++++++.|.+++.....+.. .+++.++
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~~---~-------~~~~l~i~G~~~~~~~~~~~~~~~~i~~~-------- 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLLVAK---H-------PDVRLLVAGETHPDLERYRGEAYALAERL-------- 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHHHhh---C-------CCeEEEEeccCccchhhhhhhhHhHHHhc--------
Confidence 45688999999999999998 98888877652 1 268999999988766543211 0112221
Q ss_pred CCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCcc--CCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 490 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGME--ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 490 ~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~E--asGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
...+ +|.|+.+ ...+-...+++.||+.++||+ .| ..|..-+-||..|.+.|++-.|+ .|.+.. +.+++++
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~--~~~g~~~ 316 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD--GGTGLLV 316 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeee--CCCcEEE
Confidence 2355 7999988 555566778899999999999 88 66777788999999999886665 332211 2233332
Q ss_pred ccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 005595 567 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 646 (689)
Q Consensus 567 G~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~ 646 (689)
.+.|.+++.+.|. .+
T Consensus 317 -------------------------------------~~~d~~~~~~~l~----------------------------~l 331 (366)
T cd03822 317 -------------------------------------PPGDPAALAEAIR----------------------------RL 331 (366)
T ss_pred -------------------------------------cCCCHHHHHHHHH----------------------------HH
Confidence 2223455555443 33
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 005595 647 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 679 (689)
Q Consensus 647 Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~ 679 (689)
..|++.+.+|..++......|||++.+++|.+-
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 364 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWERVAERYLRL 364 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 567888888888876665579999999999763
No 38
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.13 E-value=1.5e-09 Score=122.39 Aligned_cols=255 Identities=13% Similarity=0.099 Sum_probs=150.5
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHH
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+.++||+||-|..++ |.++|... .+.+.+|+.|+|-|.. | . -+.||...+|+..+-
T Consensus 130 ~~~d~iwihDyhl~ll-p~~lr~~~-------------~~~~i~~f~HipfP~~-e-----~-~~~lp~~~~ll~~~l-- 186 (460)
T cd03788 130 RPGDLVWVHDYHLLLL-PQMLRERG-------------PDARIGFFLHIPFPSS-E-----I-FRCLPWREELLRGLL-- 186 (460)
T ss_pred CCCCEEEEeChhhhHH-HHHHHhhC-------------CCCeEEEEEeCCCCCh-H-----H-HhhCCChHHHHHHHh--
Confidence 3568999999999887 78888632 4578999999996544 2 2 245676655554431
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCc
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 339 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~ 339 (689)
+.| ++.. .....+.--+..|+.+-+++......++ +.+ ...++.-|-||||+
T Consensus 187 ---------~~D--------~igF----~t~~~~~~Fl~~~~~~l~~~~~~~~~i~---~~g----~~~~i~vip~GID~ 238 (460)
T cd03788 187 ---------GAD--------LIGF----QTERYARNFLSCCSRLLGLEVTDDGGVE---YGG----RRVRVGAFPIGIDP 238 (460)
T ss_pred ---------cCC--------EEEE----CCHHHHHHHHHHHHHHcCCcccCCceEE---ECC----EEEEEEEEeCeEcH
Confidence 111 1111 0112222223344444444443311111 001 12356777899997
Q ss_pred ccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeec
Q 005595 340 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 419 (689)
Q Consensus 340 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~v 419 (689)
..+- |.. .+++ .+...+ ++ .+. .++..+++++
T Consensus 239 ~~f~----~~~---------------------------~~~~-------~~~~~~-~~-------~~~--~~~~~~il~v 270 (460)
T cd03788 239 DAFR----KLA---------------------------ASPE-------VQERAA-EL-------RER--LGGRKLIVGV 270 (460)
T ss_pred HHHH----HHh---------------------------cCch-------hHHHHH-HH-------HHh--cCCCEEEEEe
Confidence 7662 211 1111 111111 11 111 2467889999
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCcCCCCcceEE
Q 005595 420 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 498 (689)
Q Consensus 420 rR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y-~~aK~iIk~i~~~a~~in~dp~~~~~lkVv 498 (689)
.|+...|+.++ ++..+.++++- .|+.+ ..+++++.|.+.-++ ....++.+.+.+++..+|..-...+.-.|+
T Consensus 271 gRl~~~Kgi~~-ll~A~~~ll~~---~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~ 343 (460)
T cd03788 271 DRLDYSKGIPE-RLLAFERLLER---YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVR 343 (460)
T ss_pred cCccccCCHHH-HHHHHHHHHHh---Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEE
Confidence 99999999999 99998888652 23211 136777776554222 223345666777766665211111112477
Q ss_pred EEcCC-CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCce
Q 005595 499 FVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 542 (689)
Q Consensus 499 F~enY-~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l 542 (689)
|+.++ +-+--..++++||+++.||+ .|+-|+.-+-||.-|.+
T Consensus 344 ~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 344 YLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDD 386 (460)
T ss_pred EEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecC
Confidence 77654 66666678899999999999 89999999999999996
No 39
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.10 E-value=5.3e-09 Score=111.61 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=119.9
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
.+.++++.|+..+|+.+. ++..+..+.+- + .++.++++|.+. +. ..+.++++.. .+.
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~l~~~---~-------~~~~l~ivG~g~--~~------~~~~~~~~~~----~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFARLARR---V-------PEVRLVIIGDGP--LL------AALEALARAL----GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHHHHHh---C-------CCeEEEEEeCch--HH------HHHHHHHHHc----CCC
Confidence 357889999999999999 88888777542 1 258999999642 11 1233333321 134
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCC----ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecc
Q 005595 493 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 568 (689)
Q Consensus 493 ~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~----~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~ 568 (689)
+ +|.|+...+-+--..+++.||+++.||+.+ .|++|++-+-||..|.+.|++-.|.+.|++++ +.+|++|.
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~--~~~g~~~~- 319 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED--GETGLLVP- 319 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec--CCeeEEEC-
Confidence 5 788888776666677889999999999742 58999999999999999999877776554433 23444442
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc
Q 005595 569 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 648 (689)
Q Consensus 569 ~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~ 648 (689)
+.|.+++.++|. .+..
T Consensus 320 ------------------------------------~~d~~~l~~~i~----------------------------~l~~ 335 (367)
T cd05844 320 ------------------------------------EGDVAALAAALG----------------------------RLLA 335 (367)
T ss_pred ------------------------------------CCCHHHHHHHHH----------------------------HHHc
Confidence 223455555443 2345
Q ss_pred CHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005595 649 DQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 678 (689)
Q Consensus 649 ~~~~W~~~~~~~ma~~-g~FS~drti~eY~~ 678 (689)
|++.+.++..++.... ..|||++.+++|.+
T Consensus 336 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 336 DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 7777777776664433 37999999998753
No 40
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.10 E-value=1.8e-09 Score=117.14 Aligned_cols=186 Identities=17% Similarity=0.128 Sum_probs=129.0
Q ss_pred HhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 005595 404 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 483 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~ 483 (689)
++|+ .++.++++++.||+.+|+.++ ++..+.++.+.. ..++++++|.+.+.....+++.+.+.+..
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~----------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~- 248 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFG-VIDAYRKVKERV----------PDPQLVLVGSGATDDPEGWIVYEEVLEYA- 248 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHH-HHHHHHHHHhhC----------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-
Confidence 4564 477899999999999999999 988888776521 25799999999765444444444443322
Q ss_pred hhcCCcCCCCcceEEEEcCC--CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCc
Q 005595 484 VVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 561 (689)
Q Consensus 484 ~in~dp~~~~~lkVvF~enY--~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~ 561 (689)
...+ +|.|+... +-+....++++||++++||+ .|..|++-+-||..|.+.|++-.|...|+++. +.
T Consensus 249 ------~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~--~~ 316 (372)
T cd03792 249 ------EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIED--GE 316 (372)
T ss_pred ------CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhccc--CC
Confidence 1344 67777665 56667788999999999999 99999999999999999998865554443322 23
Q ss_pred ceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHH
Q 005595 562 NFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 641 (689)
Q Consensus 562 n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~ 641 (689)
+|+++.. .+++..
T Consensus 317 ~g~~~~~---------------------------------------~~~~a~---------------------------- 329 (372)
T cd03792 317 TGFLVDT---------------------------------------VEEAAV---------------------------- 329 (372)
T ss_pred ceEEeCC---------------------------------------cHHHHH----------------------------
Confidence 3433210 111111
Q ss_pred HHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005595 642 RVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIWN 682 (689)
Q Consensus 642 ~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~iw~ 682 (689)
.+..+..+++.+.+|..++-... ..|||++++++|.+-+..
T Consensus 330 ~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 33344567777887777764432 389999999999876654
No 41
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.09 E-value=1.3e-08 Score=119.78 Aligned_cols=127 Identities=16% Similarity=0.187 Sum_probs=95.8
Q ss_pred CCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 005595 410 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 489 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp 489 (689)
..+.++++++.|+.++|++++ ++..+.++.+ . . ..++++|+|.+.. .. .+.++++..
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~-------p~~~LvIvG~G~~--~~------~L~~l~~~l---- 570 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-H-------PKVRFIMVGGGPL--LE------SVREFAQRL---- 570 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-C-------cCeEEEEEccCcc--hH------HHHHHHHHc----
Confidence 345789999999999999999 8888888765 2 1 2489999998741 11 233444322
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
.+.+ +|.| .+|--.+. .+++++|+++.||+ +|..|.+=+-||..|.+.|+|..|+..|+++. ++|||++.
T Consensus 571 gL~~--~V~f-lG~~~dv~-~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~ 640 (694)
T PRK15179 571 GMGE--RILF-TGLSRRVG-YWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLP 640 (694)
T ss_pred CCCC--cEEE-cCCcchHH-HHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeC
Confidence 2344 4555 55654555 67899999999999 99999999999999999999998888887765 56788774
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.09 E-value=9.1e-09 Score=106.94 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=89.9
Q ss_pred HhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 005595 404 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 483 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~ 483 (689)
.+|+ +++.++++++.|+..+|+.++ ++..+.++.+- . .+++++++|.+....... .... +
T Consensus 186 ~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-~---------~~~~l~i~G~~~~~~~~~-----~~~~--~ 245 (365)
T cd03807 186 ELGL--PEDTFLIGIVARLHPQKDHAT-LLRAAALLLKK-F---------PNARLLLVGDGPDRANLE-----LLAL--K 245 (365)
T ss_pred hcCC--CCCCeEEEEecccchhcCHHH-HHHHHHHHHHh-C---------CCeEEEEecCCcchhHHH-----HHHH--H
Confidence 4454 467789999999999999999 98888877652 1 268999999876554431 1111 1
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 005595 484 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 557 (689)
Q Consensus 484 ~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~ 557 (689)
.. .+.+ +|.|+.. ..++ ..+++.||+.+.||+ .|..|++-+-||..|.+.|++..|+.-|+..+
T Consensus 246 ~~----~~~~--~v~~~g~-~~~~-~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~ 309 (365)
T cd03807 246 EL----GLED--KVILLGE-RSDV-PALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD 309 (365)
T ss_pred hc----CCCc--eEEEccc-cccH-HHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc
Confidence 11 2344 5666653 3334 468899999999999 79999999999999999999877776555443
No 43
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.09 E-value=8.5e-09 Score=108.97 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=85.9
Q ss_pred HhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 005595 404 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 483 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~ 483 (689)
.+++ .++.+++.++.|+...|+.++ ++..+.++.+- . .+++++|.|.+.-. +++.+.+ +
T Consensus 181 ~~~~--~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~~---~-------~~~~l~i~G~g~~~----~~~~~~~----~ 239 (360)
T cd04951 181 ALGV--KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLSD---Y-------LDIKLLIAGDGPLR----ATLERLI----K 239 (360)
T ss_pred HcCc--CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHhh---C-------CCeEEEEEcCCCcH----HHHHHHH----H
Confidence 4454 467789999999999999999 88888776542 1 25899999975422 2222222 2
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 005595 484 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 555 (689)
Q Consensus 484 ~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~ 555 (689)
.. ...+ +|.|+. +-..+ ..++.+||+++.||+ .|..|.+-+-||..|.+.|++..|...|++
T Consensus 240 ~~----~~~~--~v~~~g-~~~~~-~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i 301 (360)
T cd04951 240 AL----GLSN--RVKLLG-LRDDI-AAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVV 301 (360)
T ss_pred hc----CCCC--cEEEec-ccccH-HHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEe
Confidence 21 1234 577765 32234 467899999999999 899999999999999999988666654433
No 44
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.06 E-value=8.8e-09 Score=108.74 Aligned_cols=181 Identities=14% Similarity=0.072 Sum_probs=125.1
Q ss_pred hhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhc
Q 005595 296 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 375 (689)
Q Consensus 296 ai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 375 (689)
.+..|+.|.++|+...+.++.. + -.+.+...|.||++...+. +..
T Consensus 134 ~~~~~d~vi~~s~~~~~~~~~~-~-----~~~~~~~~i~~gi~~~~~~----~~~------------------------- 178 (357)
T cd03795 134 FLRRADAIVATSPNYAETSPVL-R-----RFRDKVRVIPLGLDPARYP----RPD------------------------- 178 (357)
T ss_pred HHHhcCEEEeCcHHHHHHHHHh-c-----CCccceEEecCCCChhhcC----Ccc-------------------------
Confidence 5667899999999877765421 1 1235677888999987772 110
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCC
Q 005595 376 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 376 ~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
. .+. ..... ..+.+.++++.|+.++|+.+. ++..+.++. +
T Consensus 179 ----------~--~~~-----------~~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~ 218 (357)
T cd03795 179 ----------A--LEE-----------AIWRR--AAGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------D 218 (357)
T ss_pred ----------h--hhh-----------HhhcC--CCCCcEEEEecccccccCHHH-HHHHHHhcc--------------C
Confidence 0 000 01111 245678999999999999998 777766542 4
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhH
Q 005595 456 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 535 (689)
Q Consensus 456 ~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mk 535 (689)
++++++|.+..... +.++.+. ..... +|.|+...+-+....+++.||+.++||....|+.|++-+-
T Consensus 219 ~~l~i~G~g~~~~~--------~~~~~~~----~~~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E 284 (357)
T cd03795 219 APLVIVGEGPLEAE--------LEALAAA----LGLLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE 284 (357)
T ss_pred cEEEEEeCChhHHH--------HHHHHHh----cCCcc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence 78999998743222 2222221 12344 7999988887777788999999999998778999999999
Q ss_pred HhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 536 FSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 536 a~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
||..|.+.|+|..|+.-|.... .++||+++
T Consensus 285 a~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~ 314 (357)
T cd03795 285 AMAFGKPVISTEIGTGGSYVNL-HGVTGLVV 314 (357)
T ss_pred HHHcCCCEEecCCCCchhHHhh-CCCceEEe
Confidence 9999999999977776554443 34555554
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.05 E-value=3.4e-09 Score=116.17 Aligned_cols=239 Identities=15% Similarity=0.184 Sum_probs=159.0
Q ss_pred hchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhh
Q 005595 293 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 372 (689)
Q Consensus 293 ~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 372 (689)
..+++..++.|-++|+...+.+.. .++.++.-|.|||+...+ .|.-.
T Consensus 150 ~~~~~~~ad~vi~~s~~~~~~~~~--------~~~~ki~vI~ngvd~~~f----~~~~~--------------------- 196 (396)
T cd03818 150 ILLALAQADAGVSPTRWQRSTFPA--------ELRSRISVIHDGIDTDRL----RPDPQ--------------------- 196 (396)
T ss_pred hHHHHHhCCEEECCCHHHHhhCcH--------hhccceEEeCCCcccccc----CCCch---------------------
Confidence 446778899999999876665432 224688889999998776 23110
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeeccc-chhhhhhhhhhhhHHHHHHHHhhcCccccC
Q 005595 373 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERK 451 (689)
Q Consensus 373 l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR-~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~ 451 (689)
- .. .+ ..+..+.++.++++++.| +..+|+.++ ++..+.++.+- .
T Consensus 197 -------------~-~~------~~------~~~~~~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~~---~----- 241 (396)
T cd03818 197 -------------A-RL------RL------PNGRVLTPGDEVITFVARNLEPYRGFHV-FMRALPRLLRA---R----- 241 (396)
T ss_pred -------------h-hh------cc------cccccCCCCCeEEEEECCCcccccCHHH-HHHHHHHHHHH---C-----
Confidence 0 00 00 011124567788999998 999999999 99988887652 1
Q ss_pred CCCCeEEEEEecCCcCCHH----HHHH-HHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTN----AKRI-VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM 526 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~----aK~i-Ik~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~ 526 (689)
.++++++.|.+.|.|.. +... -+.+.+++...+ .+ +|.|+....-+-...++++||+++.||. .
T Consensus 242 --~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~ 310 (396)
T cd03818 242 --PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--P 310 (396)
T ss_pred --CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--c
Confidence 25889999986654421 1101 112333332110 23 7888877665666678899999999999 8
Q ss_pred cCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCC
Q 005595 527 EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY 606 (689)
Q Consensus 527 EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~ 606 (689)
|..|.+-+-||.-|.+.|+|-.|...|+++. ++||+++- +.
T Consensus 311 e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~~G~lv~-------------------------------------~~ 351 (396)
T cd03818 311 FVLSWSLLEAMACGCLVVGSDTAPVREVITD--GENGLLVD-------------------------------------FF 351 (396)
T ss_pred cccchHHHHHHHCCCCEEEcCCCCchhhccc--CCceEEcC-------------------------------------CC
Confidence 9999999999999999999977776665543 34444432 22
Q ss_pred ChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005595 607 DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 677 (689)
Q Consensus 607 ~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~ 677 (689)
|.++|.++|. .+..|++.+.+|..++-+.. ..|||++++++|.
T Consensus 352 d~~~la~~i~----------------------------~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 352 DPDALAAAVI----------------------------ELLDDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CHHHHHHHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 3455555443 33467777777777766554 2699999999986
No 46
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.04 E-value=2.6e-08 Score=109.69 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=116.8
Q ss_pred hhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHh
Q 005595 292 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 371 (689)
Q Consensus 292 m~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 371 (689)
+.+.++..++.|.+||+.-.+.+++. .+-+.++.-|.|||+...+. |.
T Consensus 164 ~~~~~~~~ad~ii~~S~~~~~~~~~~------~~~~~~i~vi~ngvd~~~~~----~~---------------------- 211 (412)
T PRK10307 164 FERSLLRRFDNVSTISRSMMNKAREK------GVAAEKVIFFPNWSEVARFQ----PV---------------------- 211 (412)
T ss_pred HHHHHHhhCCEEEecCHHHHHHHHHc------CCCcccEEEECCCcCHhhcC----CC----------------------
Confidence 44456678999999999877776531 23356788889999987772 21
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccC
Q 005595 372 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 451 (689)
Q Consensus 372 ~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~ 451 (689)
.+. .. .. +++.+|+ +++.++++++.|+.++|+.+. ++..+.++.+ .
T Consensus 212 ------~~~-------~~-~~--------~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l~~----~----- 257 (412)
T PRK10307 212 ------ADA-------DV-DA--------LRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRLRD----R----- 257 (412)
T ss_pred ------Ccc-------ch-HH--------HHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHhcc----C-----
Confidence 000 00 00 1234454 466789999999999999998 8888766522 1
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
.+++++++|.+. ..+ .+.++++..+ + + +|.|+.-...+-...++++||+.+.||+ .|+.|.
T Consensus 258 --~~~~l~ivG~g~-~~~-------~l~~~~~~~~----l-~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~ 318 (412)
T PRK10307 258 --PDLIFVICGQGG-GKA-------RLEKMAQCRG----L-P--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADL 318 (412)
T ss_pred --CCeEEEEECCCh-hHH-------HHHHHHHHcC----C-C--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccc
Confidence 258999999764 111 2333343221 2 2 5888765566777788999999999999 687664
Q ss_pred c----hhHHhhcCceEeeecCch
Q 005595 532 S----NMKFSLNGCLIIGTLDGA 550 (689)
Q Consensus 532 s----~Mka~~NG~l~lstlDG~ 550 (689)
. -.-||..|.+.|+|..|.
T Consensus 319 ~~p~kl~eama~G~PVi~s~~~g 341 (412)
T PRK10307 319 VLPSKLTNMLASGRNVVATAEPG 341 (412)
T ss_pred cCcHHHHHHHHcCCCEEEEeCCC
Confidence 3 245799999999886554
No 47
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.02 E-value=2.2e-08 Score=103.55 Aligned_cols=173 Identities=16% Similarity=0.101 Sum_probs=121.6
Q ss_pred CCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 005595 410 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 489 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp 489 (689)
.++.+.++++.|+..+|+.++ ++..+.++.+. + .++++++.|.+.+.+...+. .+....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~~---~-------~~~~l~i~G~~~~~~~~~~~---~~~~~~------- 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARILKAK---G-------PNVRLLLVGDGDEENPAAIL---EIEKLG------- 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHhc---C-------CCeEEEEEcCCCcchhhHHH---HHHhcC-------
Confidence 356689999999999999999 98888776541 1 26899999999887776432 111111
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccc
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 569 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~ 569 (689)
... +|.|+.. .+-...+++.||+.+.||+ .|.+|++-+-||..|.+.|+|-.|..-|++++ +++|+++.
T Consensus 244 -~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~-- 312 (359)
T cd03808 244 -LEG--RVEFLGF--RDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVP-- 312 (359)
T ss_pred -Ccc--eEEEeec--cccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEEC--
Confidence 233 5776654 3335568899999999999 69999999999999999999877666555443 34444442
Q ss_pred cccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcC
Q 005595 570 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKD 649 (689)
Q Consensus 570 ~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~ 649 (689)
+.+.+++.+.+. .+..|
T Consensus 313 -----------------------------------~~~~~~~~~~i~----------------------------~l~~~ 329 (359)
T cd03808 313 -----------------------------------PGDAEALADAIE----------------------------RLIED 329 (359)
T ss_pred -----------------------------------CCCHHHHHHHHH----------------------------HHHhC
Confidence 222445544443 24567
Q ss_pred HHHHHHHHHHHhcc-CCCCChHHHHHHHH
Q 005595 650 QKKWLKMSILSTAG-SGKFSSDRTIAQYA 677 (689)
Q Consensus 650 ~~~W~~~~~~~ma~-~g~FS~drti~eY~ 677 (689)
++.+.++..++... ...|||++.+++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 330 PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 77788777776555 34899999999875
No 48
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.01 E-value=2.2e-08 Score=109.87 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=101.5
Q ss_pred HhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCH-HHHHHHHHHHHHH
Q 005595 404 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT-NAKRIVKLVNDVG 482 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~-~aK~iIk~i~~~a 482 (689)
+.|. +++...++++.|+..+|+.+. ++..+.++.+- . .+++++++|.+..... ......+.+.+++
T Consensus 186 ~~~~--~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~~---~-------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~ 252 (380)
T PRK15484 186 QLNI--SPDETVLLYAGRISPDKGILL-LMQAFEKLATA---H-------SNLKLVVVGDPTASSKGEKAAYQKKVLEAA 252 (380)
T ss_pred HhCC--CCCCeEEEEeccCccccCHHH-HHHHHHHHHHh---C-------CCeEEEEEeCCccccccchhHHHHHHHHHH
Confidence 3454 355678999999999999999 98888887541 1 2589999997653221 1123334555565
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc-cCCCcchhHHhhcCceEeeecCchhHHHHHHhcCc
Q 005595 483 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 561 (689)
Q Consensus 483 ~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~-EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~ 561 (689)
+.. +. +|.|+....-+-...++++||+++.||+ + |+.|+.-+-||..|.+.|+|..|+..|+++. +.
T Consensus 253 ~~l------~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~ 320 (380)
T PRK15484 253 KRI------GD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GI 320 (380)
T ss_pred Hhc------CC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CC
Confidence 532 33 6888776665666788999999999998 6 9999999999999999999988888777665 45
Q ss_pred ceeee
Q 005595 562 NFFLF 566 (689)
Q Consensus 562 n~~~f 566 (689)
|||++
T Consensus 321 ~G~~l 325 (380)
T PRK15484 321 TGYHL 325 (380)
T ss_pred ceEEE
Confidence 66643
No 49
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.99 E-value=1.7e-08 Score=109.07 Aligned_cols=129 Identities=19% Similarity=0.170 Sum_probs=90.2
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++.++++++.|+.++|++++ ++..+.++.+- .+.. ..+++++++|.+... ++ +.+.++.. .
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~~---~~~~~l~i~G~g~~~----~~----~~~~~~~~----~ 252 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPT-LVRAFALLVRQ---LPEG---AERLRLVIVGDGPAR----GA----CEQMVRAA----G 252 (374)
T ss_pred CCCeEEEEEecCCcccCHHH-HHHHHHHHHHh---Cccc---ccceEEEEecCCchH----HH----HHHHHHHc----C
Confidence 46789999999999999999 98888887642 1110 125899999976422 11 23333221 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
+.+ .+++.++..++ ..++++||++++||+ .|++|++-+-||..|.+.|+|--|...|+++. +.+|++|
T Consensus 253 ~~~---~v~~~g~~~~~-~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~--~~~g~~~ 320 (374)
T TIGR03088 253 LAH---LVWLPGERDDV-PALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQH--GVTGALV 320 (374)
T ss_pred Ccc---eEEEcCCcCCH-HHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcC--CCceEEe
Confidence 333 44445554344 567799999999999 89999999999999999999977777666654 3444444
No 50
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.98 E-value=1.9e-08 Score=106.17 Aligned_cols=170 Identities=16% Similarity=0.099 Sum_probs=120.3
Q ss_pred hhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhc
Q 005595 296 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 375 (689)
Q Consensus 296 ai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 375 (689)
.+..++.+.++|+...+.+++. + ...+.++.-|.||++...+. +
T Consensus 127 ~~~~~~~vi~~s~~~~~~l~~~-~----~~~~~~~~vi~~~~d~~~~~----~--------------------------- 170 (355)
T cd03799 127 KLARADFVVAISEYNRQQLIRL-L----GCDPDKIHVVHCGVDLERFP----P--------------------------- 170 (355)
T ss_pred HHhhCCEEEECCHHHHHHHHHh-c----CCCcccEEEEeCCcCHHHcC----C---------------------------
Confidence 3456888999999888777642 1 23345677788888865441 0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCC
Q 005595 376 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 376 ~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
. . ....++.+.++++.|+..+|+.++ ++..+.++.+- + .+
T Consensus 171 ---~--------~------------------~~~~~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~~---~-------~~ 210 (355)
T cd03799 171 ---R--------P------------------PPPPGEPLRILSVGRLVEKKGLDY-LLEALALLKDR---G-------ID 210 (355)
T ss_pred ---c--------c------------------ccccCCCeEEEEEeeeccccCHHH-HHHHHHHHhhc---C-------CC
Confidence 0 0 001234567889999999999999 99998877541 1 26
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCc------cCC
Q 005595 456 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM------EAS 529 (689)
Q Consensus 456 ~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~------Eas 529 (689)
++++|.|.+.+..+. .+..+.. ..++ +|.|.....-.-...+++.||+.+.||+ . |+.
T Consensus 211 ~~l~i~G~~~~~~~~--------~~~~~~~----~~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~ 274 (355)
T cd03799 211 FRLDIVGDGPLRDEL--------EALIAEL----GLED--RVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGL 274 (355)
T ss_pred eEEEEEECCccHHHH--------HHHHHHc----CCCC--eEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCc
Confidence 899999988765332 2222222 1344 6888777766677788899999999999 6 999
Q ss_pred CcchhHHhhcCceEeeecCchhHHHHHH
Q 005595 530 GTSNMKFSLNGCLIIGTLDGANVEIRQE 557 (689)
Q Consensus 530 GTs~Mka~~NG~l~lstlDG~~vEi~~~ 557 (689)
|++-+-||..|.+.|++..|+.-|+++.
T Consensus 275 ~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~ 302 (355)
T cd03799 275 PVVLMEAMAMGLPVISTDVSGIPELVED 302 (355)
T ss_pred cHHHHHHHHcCCCEEecCCCCcchhhhC
Confidence 9999999999999999877776554443
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.98 E-value=2.7e-08 Score=105.35 Aligned_cols=225 Identities=12% Similarity=0.064 Sum_probs=147.2
Q ss_pred hcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccC
Q 005595 298 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 377 (689)
Q Consensus 298 ~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~ 377 (689)
..+..+-++|....+.+++. ..+-+.++.-|.|||+...+ .|.
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~-----~~~~~~~~~vi~ngi~~~~~----~~~---------------------------- 176 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSS-----SLFKGIPIEVIPNGIDTTIF----RPR---------------------------- 176 (365)
T ss_pred cCCcEEEehhHHHHHHHHhc-----cccCCCceEEeCCCCccccc----CCC----------------------------
Confidence 45667888888766666532 11224578888999998777 221
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchh--hhhhhhhhhhHHHHHHHHhhcCccccCCCCC
Q 005595 378 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 378 ~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~e--yKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
+ - . . .++..+.. ++..++.++.|... +|+.++ ++..+..+.+.. ..+
T Consensus 177 -~------~-~---~--------~~~~~~~~--~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~~---------~~~ 225 (365)
T cd03825 177 -D------K-R---E--------ARKRLGLP--ADKKIILFGAVGGTDPRKGFDE-LIEALKRLAERW---------KDD 225 (365)
T ss_pred -c------H-H---H--------HHHHhCCC--CCCeEEEEEecCCCccccCHHH-HHHHHHHhhhcc---------CCC
Confidence 0 0 0 0 01234443 45566667777665 899999 888887765420 126
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCC-HHHHHhhccCcccccccCCCCccCCCcchh
Q 005595 456 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNM 534 (689)
Q Consensus 456 ~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~-~~lA~~l~~g~Dv~l~~s~~~~EasGTs~M 534 (689)
+++++.|.+.+.... .... +|.|+.... ...-..+++.||+.++||+ .|+.|++-+
T Consensus 226 ~~~~i~G~~~~~~~~-------------------~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFGASDPEIPP-------------------DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAI 282 (365)
T ss_pred eEEEEeCCCchhhhc-------------------cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHH
Confidence 899999988764331 1133 677777766 5566778899999999999 899999999
Q ss_pred HHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHH
Q 005595 535 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDS 614 (689)
Q Consensus 535 ka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~ 614 (689)
-||..|.+.|++-.|...|++.. ++++|++ ...+.+++.++
T Consensus 283 Eam~~g~PvI~~~~~~~~e~~~~--~~~g~~~-------------------------------------~~~~~~~~~~~ 323 (365)
T cd03825 283 EALACGTPVVAFDVGGIPDIVDH--GVTGYLA-------------------------------------KPGDPEDLAEG 323 (365)
T ss_pred HHHhcCCCEEEecCCCChhheeC--CCceEEe-------------------------------------CCCCHHHHHHH
Confidence 99999999999877765544332 1233322 22234555555
Q ss_pred HhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 005595 615 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 680 (689)
Q Consensus 615 l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~~~i 680 (689)
|. + +..+++.+.++..++-+.. ..|||++.+++|.+-.
T Consensus 324 l~-------------------------~---l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 324 IE-------------------------W---LLADPDEREELGEAARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred HH-------------------------H---HHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 53 2 3356666766666654433 3799999999998654
No 52
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.98 E-value=3.2e-08 Score=112.62 Aligned_cols=291 Identities=16% Similarity=0.222 Sum_probs=159.6
Q ss_pred hhhhhhHhhHHHHHHHHHHcccccccccCCCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCCh
Q 005595 151 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 230 (689)
Q Consensus 151 Qe~fl~~a~lq~i~r~~~~~~g~~~l~~l~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~ 230 (689)
+-..||.++-. .+..|.+.. .. ..+.+.|+|||.+++++ -++|.. .....||||||--+
T Consensus 120 ea~~Fgyava~-fi~~f~~~~----~~--~~~ViaHfHEWmaG~gl-l~lr~~-------------~~~VaTvFTTHAT~ 178 (633)
T PF05693_consen 120 EAVMFGYAVAW-FIEEFYKFY----EE--KPKVIAHFHEWMAGVGL-LYLRKR-------------KPDVATVFTTHATL 178 (633)
T ss_dssp HHHHHHHHHHH-HHHHHHHH-----S---SEEEEEEEESGGGTTHH-HHHHHT-------------T-SCEEEEEESS-H
T ss_pred HHHHHHHHHHH-HHHHHHHhh----cC--CCcEEEEechHhHhHHH-HHHhcc-------------CCCeeEEEEecccc
Confidence 55778887754 345554443 11 46788999999999985 455652 25678999999644
Q ss_pred hhhhhhchHHHHHHhch----hHHHHHHHHHHHHHHHHHHhcCCCccccc-ccccccCCCCCCccchhchhhhcCCceee
Q 005595 231 PEALEKWSQAVMWKLLP----RHMEIIEEIDKRFIAMVRSTRSDLESKIP-SMCILDNNPKKPVVRMANLCVVSAHTVNG 305 (689)
Q Consensus 231 ~~g~e~f~~~l~~~~lp----~~~~ii~~in~~~~~~~~~~~~~~~~~~~-~~~ii~~~~~~~~vnm~~lai~~S~~vNg 305 (689)
. .+.+- +.+.- ....+.++.. ..++ . .+..|-+.|...||..+|
T Consensus 179 l-----------GR~l~~~~~~~Y~~--------------L~~~~~d~eA~~~~i-~-----~k~~iEraaA~~AdvFTT 227 (633)
T PF05693_consen 179 L-----------GRYLAANNKDFYNN--------------LDKFNGDQEAGERNI-Y-----HKHSIERAAAHYADVFTT 227 (633)
T ss_dssp H-----------HHHHTTTSS-TTTS--------------GTTS-HHHHHHHTT--H-----HHHHHHHHHHHHSSEEEE
T ss_pred h-----------hhHhhcCCCcHHHH--------------hhccCccccccCccc-h-----HHHHHHHHHHHhcCeeee
Confidence 3 11100 00000 0001111110 1111 1 257888999999999999
Q ss_pred ehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHH
Q 005595 306 VAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAE 385 (689)
Q Consensus 306 VS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~ 385 (689)
||..=+.+.+. .++. -|+-+. -||++.... |+ ..+
T Consensus 228 VSeITa~Ea~~-LL~r----~pDvV~--pNGl~v~~~-----~~-----------------------------~~e---- 262 (633)
T PF05693_consen 228 VSEITAKEAEH-LLKR----KPDVVT--PNGLNVDKF-----PA-----------------------------LHE---- 262 (633)
T ss_dssp SSHHHHHHHHH-HHSS------SEE------B-GGGT-----SS-----------------------------TTH----
T ss_pred hhhhHHHHHHH-HhCC----CCCEEc--CCCcccccc-----cc-----------------------------chH----
Confidence 99998888763 2221 122121 399987665 22 122
Q ss_pred HHHHHHHHHHHHHHHHHHHh-C-CcCCCC-CeeEeecccc-hhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeE-EEE
Q 005595 386 WESAKMASKKHLADYIWRVT-G-VTIDPN-SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IMI 460 (689)
Q Consensus 386 ~~~~K~~~K~~L~~~i~~~~-g-~~~~p~-~l~~~~vrR~-~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q-~If 460 (689)
++..|..+|+++.++++.++ | ..++|| .+++.-+.|. =.-||.|+ .+..+.||.+.+.....+ ..|. ||+
T Consensus 263 fqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~-fieAL~rLn~~lk~~~~~----~tVVaFii 337 (633)
T PF05693_consen 263 FQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV-FIEALARLNHRLKQAGSD----KTVVAFII 337 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH-HHHHHHHHHHHHHHTT-S-----EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH-HHHHHHHHHHHHhhcCCC----CeEEEEEE
Confidence 45788999999999999876 3 355654 6677777887 57799999 999999998754311111 1232 333
Q ss_pred EecCCcCC----HHHHHHHHHH----HHHHhhh-----------------------------------------------
Q 005595 461 GGKAFATY----TNAKRIVKLV----NDVGEVV----------------------------------------------- 485 (689)
Q Consensus 461 ~GKa~P~y----~~aK~iIk~i----~~~a~~i----------------------------------------------- 485 (689)
.=...-.+ -.|..+.|.+ .++.+.|
T Consensus 338 ~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~ 417 (633)
T PF05693_consen 338 VPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHN 417 (633)
T ss_dssp ---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEE
T ss_pred ecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeC
Confidence 21111110 0111111111 1111110
Q ss_pred ----cCCc------------CCCCcceEEEEcCC--------CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCc
Q 005595 486 ----NTDP------------EVNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC 541 (689)
Q Consensus 486 ----n~dp------------~~~~~lkVvF~enY--------~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~ 541 (689)
.+|| .-.++.||+|+|.| |++- .-++.|||+-.-||. |||-|-.-+-+...|+
T Consensus 418 l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y-~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gV 494 (633)
T PF05693_consen 418 LHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDY-YDFVRGCDLGVFPSY--YEPWGYTPLECTAFGV 494 (633)
T ss_dssp ETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-H-HHHHHHSSEEEE--S--SBSS-HHHHHHHHTT-
T ss_pred CCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCH-HHHhccCceeeeccc--cccccCChHHHhhcCC
Confidence 1232 12456899999987 3332 357799999999999 9999999999999999
Q ss_pred eEeee
Q 005595 542 LIIGT 546 (689)
Q Consensus 542 l~lst 546 (689)
++|.|
T Consensus 495 PsITT 499 (633)
T PF05693_consen 495 PSITT 499 (633)
T ss_dssp -EEEE
T ss_pred ceeec
Confidence 99987
No 53
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.95 E-value=8.5e-08 Score=98.85 Aligned_cols=287 Identities=16% Similarity=0.118 Sum_probs=182.9
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHH
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+|++||++.+++..... ++. ...+..++++.|...+... .........
T Consensus 84 ~~~Dii~~~~~~~~~~~~-~~~--------------~~~~~~~i~~~h~~~~~~~--~~~~~~~~~-------------- 132 (374)
T cd03801 84 ERFDVVHAHDWLALLAAA-LAA--------------RLLGIPLVLTVHGLEFGRP--GNELGLLLK-------------- 132 (374)
T ss_pred cCCcEEEEechhHHHHHH-HHH--------------HhcCCcEEEEeccchhhcc--ccchhHHHH--------------
Confidence 478999999999988753 211 1245779999999877643 111000000
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCc
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 339 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~ 339 (689)
....+....+..++.+.++|+-..+.++.. + ...+.++.-+.||++.
T Consensus 133 ----------------------------~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-~----~~~~~~~~~i~~~~~~ 179 (374)
T cd03801 133 ----------------------------LARALERRALRRADRIIAVSEATREELREL-G----GVPPEKITVIPNGVDT 179 (374)
T ss_pred ----------------------------HHHHHHHHHHHhCCEEEEecHHHHHHHHhc-C----CCCCCcEEEecCcccc
Confidence 011233344557889999999877766532 1 1113567778899988
Q ss_pred ccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeec
Q 005595 340 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 419 (689)
Q Consensus 340 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~v 419 (689)
..+. +.- . .. +.. ....++.+.++++
T Consensus 180 ~~~~----~~~--------~-------------------------~~---------------~~~--~~~~~~~~~i~~~ 205 (374)
T cd03801 180 ERFR----PAP--------R-------------------------AA---------------RRR--LGIPEDEPVILFV 205 (374)
T ss_pred cccC----ccc--------h-------------------------HH---------------Hhh--cCCcCCCeEEEEe
Confidence 7762 110 0 00 001 1223567899999
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 005595 420 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 499 (689)
Q Consensus 420 rR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF 499 (689)
.|+...|+.+. ++..+..+.+. + ..+++++.|.+. ... .+.++.+. ...++ +|.|
T Consensus 206 g~~~~~k~~~~-~i~~~~~~~~~---~-------~~~~l~i~G~~~-~~~-------~~~~~~~~----~~~~~--~v~~ 260 (374)
T cd03801 206 GRLVPRKGVDL-LLEALAKLRKE---Y-------PDVRLVIVGDGP-LRE-------ELEALAAE----LGLGD--RVTF 260 (374)
T ss_pred cchhhhcCHHH-HHHHHHHHhhh---c-------CCeEEEEEeCcH-HHH-------HHHHHHHH----hCCCc--ceEE
Confidence 99999999998 88877776542 1 258999999322 111 12222221 12345 7888
Q ss_pred EcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhh
Q 005595 500 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 579 (689)
Q Consensus 500 ~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~ 579 (689)
....+-+-...++..||+.++|++ .|++|++-+-||..|.+.|++-.|+.-|+++. +.+++++.
T Consensus 261 ~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~------------ 324 (374)
T cd03801 261 LGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVP------------ 324 (374)
T ss_pred EeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeC------------
Confidence 887776667778889999999999 69999999999999999999877776555443 23333332
Q ss_pred ccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 005595 580 REDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSIL 659 (689)
Q Consensus 580 ~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~ 659 (689)
+.+.+++.+.|. .+..+++.+.++..+
T Consensus 325 -------------------------~~~~~~l~~~i~----------------------------~~~~~~~~~~~~~~~ 351 (374)
T cd03801 325 -------------------------PGDPEALAEAIL----------------------------RLLDDPELRRRLGEA 351 (374)
T ss_pred -------------------------CCCHHHHHHHHH----------------------------HHHcChHHHHHHHHH
Confidence 222455555443 335677777777776
Q ss_pred Hhcc-CCCCChHHHHHHHHH
Q 005595 660 STAG-SGKFSSDRTIAQYAK 678 (689)
Q Consensus 660 ~ma~-~g~FS~drti~eY~~ 678 (689)
+.+. ...|||++.+++|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~ 371 (374)
T cd03801 352 ARERVAERFSWDRVAARTEE 371 (374)
T ss_pred HHHHHHHhcCHHHHHHHHHH
Confidence 5421 238999999999876
No 54
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.93 E-value=7.9e-08 Score=100.48 Aligned_cols=188 Identities=16% Similarity=0.172 Sum_probs=130.0
Q ss_pred hhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHh
Q 005595 292 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 371 (689)
Q Consensus 292 m~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 371 (689)
+.+..+..++.+.++|+...+.++.. + .+.++.-+.||++...+. +.
T Consensus 141 ~~~~~~~~~d~i~~~s~~~~~~~~~~--~-----~~~~~~vi~~~~~~~~~~----~~---------------------- 187 (374)
T cd03817 141 LSRRFYNRCDAVIAPSEKIADLLREY--G-----VKRPIEVIPTGIDLDRFE----PV---------------------- 187 (374)
T ss_pred HHHHHhhhCCEEEeccHHHHHHHHhc--C-----CCCceEEcCCccchhccC----cc----------------------
Confidence 44555667899999999876666531 1 133466778888876651 10
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccC
Q 005595 372 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 451 (689)
Q Consensus 372 ~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~ 451 (689)
+.. . . ++..+. +++.+.++++.|+..+|+.+. ++..+.++.+-
T Consensus 188 ------~~~-----~--~------------~~~~~~--~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~~--------- 230 (374)
T cd03817 188 ------DGD-----D--E------------RRKLGI--PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLKE--------- 230 (374)
T ss_pred ------chh-----H--H------------HHhcCC--CCCCeEEEEEeeeecccCHHH-HHHHHHHHHHh---------
Confidence 000 0 0 123333 356688999999999999998 88888776541
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
..++++++.|.+... + .+.++.+.. ...+ +|.|+...+-+-...+++.||+.++||+ .|..|+
T Consensus 231 -~~~~~l~i~G~~~~~----~----~~~~~~~~~----~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~ 293 (374)
T cd03817 231 -EPDVKLVIVGDGPER----E----ELEELAREL----GLAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGL 293 (374)
T ss_pred -CCCeEEEEEeCCchH----H----HHHHHHHHc----CCCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcCh
Confidence 026899999976432 1 123333222 1344 7888888877778888999999999999 899999
Q ss_pred chhHHhhcCceEeeecCchhHHHHHHhcCcceeeecc
Q 005595 532 SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 568 (689)
Q Consensus 532 s~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~ 568 (689)
+-+-||..|.+.|++..|+.-|+++. +++|+++..
T Consensus 294 ~~~Ea~~~g~PvI~~~~~~~~~~i~~--~~~g~~~~~ 328 (374)
T cd03817 294 VLLEAMAAGLPVVAVDAPGLPDLVAD--GENGFLFPP 328 (374)
T ss_pred HHHHHHHcCCcEEEeCCCChhhheec--CceeEEeCC
Confidence 99999999999999998887665554 356666643
No 55
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.91 E-value=1.2e-07 Score=98.25 Aligned_cols=176 Identities=20% Similarity=0.179 Sum_probs=123.5
Q ss_pred chhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhh
Q 005595 294 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 373 (689)
Q Consensus 294 ~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 373 (689)
...+..++.+.++|+...+.+++. . ....++.-+.||++...+. +.
T Consensus 143 ~~~~~~~d~ii~~s~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~----~~------------------------ 188 (377)
T cd03798 143 RRALRRADAVIAVSEALADELKAL-----G-IDPEKVTVIPNGVDTERFS----PA------------------------ 188 (377)
T ss_pred HHHHhcCCeEEeCCHHHHHHHHHh-----c-CCCCceEEcCCCcCcccCC----Cc------------------------
Confidence 344556888999999888777642 1 3345788888999987762 11
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCC
Q 005595 374 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 453 (689)
Q Consensus 374 ~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~ 453 (689)
.. .+. .+.+ .+.+.+.++++.|+...|+.+. ++..+.++.+. .
T Consensus 189 ----~~---------~~~-----------~~~~--~~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~~----------~ 231 (377)
T cd03798 189 ----DR---------AEA-----------RKLG--LPEDKKVILFVGRLVPRKGIDY-LIEALARLLKK----------R 231 (377)
T ss_pred ----ch---------HHH-----------Hhcc--CCCCceEEEEeccCccccCHHH-HHHHHHHHHhc----------C
Confidence 00 000 1222 2346688999999999999999 88888776541 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 005595 454 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 533 (689)
Q Consensus 454 ~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~ 533 (689)
.++++++.|.+.+... +.+..+. ....+ +|.+....+-+-...++..||+.++||+ .|+.|++-
T Consensus 232 ~~~~l~i~g~~~~~~~--------~~~~~~~----~~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~ 295 (377)
T cd03798 232 PDVHLVIVGDGPLREA--------LEALAAE----LGLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVL 295 (377)
T ss_pred CCeEEEEEcCCcchHH--------HHHHHHh----cCCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHH
Confidence 2689999998765432 1222221 12344 6788777776667788899999999999 79999999
Q ss_pred hHHhhcCceEeeecCchhHHHHH
Q 005595 534 MKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 534 Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
+-||..|.+.|++..|+.-|.++
T Consensus 296 ~Ea~~~G~pvI~~~~~~~~~~~~ 318 (377)
T cd03798 296 LEAMACGLPVVATDVGGIPEIIT 318 (377)
T ss_pred HHHHhcCCCEEEecCCChHHHhc
Confidence 99999999999987777655443
No 56
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.89 E-value=9.2e-08 Score=100.05 Aligned_cols=229 Identities=14% Similarity=0.122 Sum_probs=150.0
Q ss_pred hchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhh
Q 005595 293 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 372 (689)
Q Consensus 293 ~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 372 (689)
.+..+..++.+-++|+...+.++. ..+.+.++.-|.||++...+. +.
T Consensus 159 ~~~~~~~~d~vi~~s~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~----~~----------------------- 205 (394)
T cd03794 159 ERLIYRRADAIVVISPGMREYLVR------RGVPPEKISVIPNGVDLELFK----PP----------------------- 205 (394)
T ss_pred HHHHHhcCCEEEEECHHHHHHHHh------cCCCcCceEEcCCCCCHHHcC----Cc-----------------------
Confidence 344566789999999977766651 123345677788998876551 11
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCC
Q 005595 373 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKK 452 (689)
Q Consensus 373 l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~ 452 (689)
.. ..+ . +..+ ..++.+.++++.|+..+|+.++ ++..+.++.+.
T Consensus 206 -----~~--------~~~------~-----~~~~--~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~---------- 248 (394)
T cd03794 206 -----PA--------DES------L-----RKEL--GLDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR---------- 248 (394)
T ss_pred -----cc--------hhh------h-----hhcc--CCCCcEEEEEecCcccccCHHH-HHHHHHHHhhc----------
Confidence 00 000 0 1222 2356789999999999999999 88888776541
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCC-Cc
Q 005595 453 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS-GT 531 (689)
Q Consensus 453 ~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~Eas-GT 531 (689)
.++++++.|.+...... .+.... ...+ +|.|+...+-+-...++..||+.+.||. .|.. |.
T Consensus 249 -~~~~l~i~G~~~~~~~~--------~~~~~~----~~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~ 310 (394)
T cd03794 249 -PDIRFLIVGDGPEKEEL--------KELAKA----LGLD---NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEG 310 (394)
T ss_pred -CCeEEEEeCCcccHHHH--------HHHHHH----cCCC---cEEEeCCCChHHHHHHHHhhCeeEEecc--Ccccccc
Confidence 26899999987653322 111111 1122 5889887776777788899999999999 6664 33
Q ss_pred ----chhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCC
Q 005595 532 ----SNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD 607 (689)
Q Consensus 532 ----s~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~ 607 (689)
+-+-||..|.+.|++-.|+.-|+.... .+|+++ .+.+
T Consensus 311 ~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~~~-------------------------------------~~~~ 351 (394)
T cd03794 311 VSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGLVV-------------------------------------PPGD 351 (394)
T ss_pred cCchHHHHHHHCCCcEEEecCCCchhhhccC--CcceEe-------------------------------------CCCC
Confidence 348999999999998777754433321 222222 2224
Q ss_pred hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCC-CCChHHHHHHH
Q 005595 608 YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSG-KFSSDRTIAQY 676 (689)
Q Consensus 608 ~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g-~FS~drti~eY 676 (689)
.+++.+.|. ++ ..|++.|.++..++..... .|||++.+++|
T Consensus 352 ~~~l~~~i~-------------------------~~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 352 PEALAAAIL-------------------------EL---LDDPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHH-------------------------HH---HhChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 566666554 22 3688888888877765543 79999999887
No 57
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.88 E-value=4.4e-08 Score=102.87 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=87.5
Q ss_pred eeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 493 (689)
Q Consensus 414 l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~ 493 (689)
..++++.|+.+.|++++ ++....+ .++.++++|.+.......+ .+.... ...+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~-li~~~~~---------------~~~~l~i~G~~~~~~~~~~-------~~~~~~----~~~~ 224 (335)
T cd03802 172 DYLLFLGRISPEKGPHL-AIRAARR---------------AGIPLKLAGPVSDPDYFYR-------EIAPEL----LDGP 224 (335)
T ss_pred CEEEEEEeeccccCHHH-HHHHHHh---------------cCCeEEEEeCCCCHHHHHH-------HHHHhc----ccCC
Confidence 35789999999999998 7665321 1468999998865443321 112110 0234
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 494 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 494 ~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
+|.|+..-+-.-...+++++|++++||+ ..|.+|++-+-||..|.+.|++--|+..|+++. +.||+++.
T Consensus 225 --~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~--~~~g~l~~ 293 (335)
T cd03802 225 --DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED--GVTGFLVD 293 (335)
T ss_pred --cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeC--CCcEEEeC
Confidence 7888877665556688899999999997 239999999999999999999988887666554 34666664
No 58
>PHA01633 putative glycosyl transferase group 1
Probab=98.88 E-value=2.2e-08 Score=108.64 Aligned_cols=185 Identities=13% Similarity=0.103 Sum_probs=125.1
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
|+.+.++++.|++++|++++ ++..+.++.+- .|.. ...++++++|.+ .+.++ .
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~~---~p~~---~~~i~l~ivG~~------------~~~~l--------~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNTK---YPDI---AKKIHFFVISHK------------QFTQL--------E 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHHh---CCCc---cccEEEEEEcHH------------HHHHc--------C
Confidence 46788999999999999999 99999887651 1210 013678887731 12111 2
Q ss_pred CCCcceEEEEcCCC---HHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 491 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 491 ~~~~lkVvF~enY~---~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
+++ +|.|+-.++ -+-...++++||++++||+ .|++|+..+-||..|++.|++.-|...|+ +||..+++|
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei---~g~~~~~Li- 270 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF---TSWQWNLLI- 270 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee---cCCccceee-
Confidence 455 788886442 3345679999999999999 89999999999999999999988877554 444333444
Q ss_pred cccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 005595 568 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 646 (689)
Q Consensus 568 ~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~-f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~ 646 (689)
.+|++.++.. + .-+.|. |.++++++|.++|. ++...
T Consensus 271 -~~~~v~~~~~-----~------------~~g~g~~~~~~d~~~la~ai~-------------------------~~~~~ 307 (335)
T PHA01633 271 -KSSKVEEYYD-----K------------EHGQKWKIHKFQIEDMANAII-------------------------LAFEL 307 (335)
T ss_pred -CCCCHHHhcC-----c------------ccCceeeecCCCHHHHHHHHH-------------------------HHHhc
Confidence 3556654320 0 014454 77788999999997 66666
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 005595 647 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYA 677 (689)
Q Consensus 647 Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~ 677 (689)
+ ++..= .+.....|. .|+|++-.++|.
T Consensus 308 ~-~~~~~-~~~~~~~a~--~f~~~~~~~~~~ 334 (335)
T PHA01633 308 Q-DREER-SMKLKELAK--KYDIRNLYTRFL 334 (335)
T ss_pred c-Chhhh-hHHHHHHHH--hcCHHHHHHHhh
Confidence 5 33221 222233333 899999888875
No 59
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.84 E-value=1.7e-07 Score=105.82 Aligned_cols=253 Identities=13% Similarity=0.128 Sum_probs=145.6
Q ss_pred CCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHHH
Q 005595 181 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 260 (689)
Q Consensus 181 ~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~ 260 (689)
+-++|.+||-|=.++ |.+||.+. .+.++.|.-|+|-|. ..+-+.||..-+|+..+-
T Consensus 127 ~~d~vwvhDYhl~l~-p~~lr~~~-------------~~~~igfFlHipfP~-------~e~f~~lp~r~~il~gll--- 182 (456)
T TIGR02400 127 PGDIVWVHDYHLMLL-PAMLRELG-------------VQNKIGFFLHIPFPS-------SEIYRTLPWRRELLEGLL--- 182 (456)
T ss_pred CCCEEEEecchhhHH-HHHHHhhC-------------CCCeEEEEEeCCCCC-------hHHHhhCCcHHHHHHHHh---
Confidence 457999999998886 89999752 346799999988543 333356888777776643
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcc
Q 005595 261 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 340 (689)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~ 340 (689)
+-| +|..+.....=||...|-+.. |+......+ .+ .-...++.-+-||||+.
T Consensus 183 --------~~d--------ligF~t~~~~~~Fl~~~~~~l----~~~~~~~~~----~~----~g~~~~v~viP~GID~~ 234 (456)
T TIGR02400 183 --------AYD--------LVGFQTYDDARNFLSAVSREL----GLETLPNGV----ES----GGRTVRVGAFPIGIDVD 234 (456)
T ss_pred --------cCC--------EEEECCHHHHHHHHHHHHHHh----CCcccCCce----EE----CCcEEEEEEecCcCCHH
Confidence 211 111100000224433332211 111000000 00 01233577788999988
Q ss_pred cccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecc
Q 005595 341 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 420 (689)
Q Consensus 341 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vr 420 (689)
++. |.. .+++. ++. ...+++++ ++..+++.|.
T Consensus 235 ~f~----~~~---------------------------~~~~~-------~~~-----~~~lr~~~-----~~~~vIl~Vg 266 (456)
T TIGR02400 235 RFA----EQA---------------------------KKPSV-------QKR-----IAELRESL-----KGRKLIIGVD 266 (456)
T ss_pred HHH----HHh---------------------------cChhH-------HHH-----HHHHHHHc-----CCCeEEEEcc
Confidence 772 211 11111 111 11122333 2557889999
Q ss_pred cchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 005595 421 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 499 (689)
Q Consensus 421 R~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF 499 (689)
|++..|+..+ ++..++++++ + .|+.+ ..++++..|... .....-.++.+.+.+++..||..-...+...|++
T Consensus 267 RLd~~KGi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~ 339 (456)
T TIGR02400 267 RLDYSKGLPE-RLLAFERFLE--E-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339 (456)
T ss_pred ccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEE
Confidence 9999999999 9999999875 2 33321 235666555322 1112223455666666666653211111123666
Q ss_pred EcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCce
Q 005595 500 VPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 542 (689)
Q Consensus 500 ~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l 542 (689)
+.+ .+-+---.++++||+++.||+ .|.-|+.-+-||.-|.+
T Consensus 340 l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P 381 (456)
T TIGR02400 340 LNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDP 381 (456)
T ss_pred EcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCC
Confidence 664 445555678899999999999 89999999999988876
No 60
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.82 E-value=4.8e-08 Score=103.56 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=122.2
Q ss_pred chhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhh
Q 005595 294 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 373 (689)
Q Consensus 294 ~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l 373 (689)
.+.+..++.+.+||+-..+.+... ..+.++.-|.|||+...+. +.
T Consensus 132 ~~~~~~~~~~i~~s~~~~~~~~~~-------~~~~~~~vi~ngvd~~~~~----~~------------------------ 176 (358)
T cd03812 132 KLINRLATDYLACSEEAGKWLFGK-------VKNKKFKVIPNGIDLEKFI----FN------------------------ 176 (358)
T ss_pred HHHHhcCCEEEEcCHHHHHHHHhC-------CCcccEEEEeccCcHHHcC----CC------------------------
Confidence 445666888999998766555421 2356788889999987662 11
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCC
Q 005595 374 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 453 (689)
Q Consensus 374 ~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~ 453 (689)
+. . +.. ++..+ ..++.+.++++.|+..+|+.++ ++..+.++.+. .
T Consensus 177 ----~~------~---~~~---------~~~~~--~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~~---~------- 221 (358)
T cd03812 177 ----EE------I---RKK---------RRELG--ILEDKFVIGHVGRFSEQKNHEF-LIEIFAELLKK---N------- 221 (358)
T ss_pred ----ch------h---hhH---------HHHcC--CCCCCEEEEEEeccccccChHH-HHHHHHHHHHh---C-------
Confidence 00 0 000 12233 3467799999999999999999 99888888652 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcch
Q 005595 454 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 533 (689)
Q Consensus 454 ~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~ 533 (689)
.++++++.|.+..... +.+.++.. ...+ +|.|+. +..++. .++..||+.++||+ .|.+|++-
T Consensus 222 ~~~~l~ivG~g~~~~~--------~~~~~~~~----~~~~--~v~~~g-~~~~~~-~~~~~adi~v~ps~--~E~~~~~~ 283 (358)
T cd03812 222 PNAKLLLVGDGELEEE--------IKKKVKEL----GLED--KVIFLG-VRNDVP-ELLQAMDVFLFPSL--YEGLPLVL 283 (358)
T ss_pred CCeEEEEEeCCchHHH--------HHHHHHhc----CCCC--cEEEec-ccCCHH-HHHHhcCEEEeccc--ccCCCHHH
Confidence 2689999998653221 23333321 2344 566654 444444 57899999999999 89999999
Q ss_pred hHHhhcCceEeeecCchhHHHHHH
Q 005595 534 MKFSLNGCLIIGTLDGANVEIRQE 557 (689)
Q Consensus 534 Mka~~NG~l~lstlDG~~vEi~~~ 557 (689)
+-||..|++.|+|-.|..-|+.+.
T Consensus 284 lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 284 IEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred HHHHHhCCCEEEEcCCchhhhhcc
Confidence 999999999999988887665554
No 61
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.79 E-value=5.9e-07 Score=99.82 Aligned_cols=135 Identities=14% Similarity=0.095 Sum_probs=92.7
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++..+++.+.|+.+.|+.+. ++.++.++.+... ... ....+.++++|.|. . . .+ +.+..+.. .
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G~-~-~--~~----l~~~~~~~----~ 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKGP-L-K--EK----YLERIKEL----K 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecCc-c-H--HH----HHHHHHHc----C
Confidence 34567778899999999999 9999988865311 000 00148999999874 2 1 12 23333321 1
Q ss_pred CCCcceEEEEcCC-CHHHHHhhccCcccccccCCCC-ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 491 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 491 ~~~~lkVvF~enY-~~~lA~~l~~g~Dv~l~~s~~~-~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
+. .++|+.+| .-+-...++++||+++.++... .|..|+.-+-||.-|.+.|+|..|...|++++ ++||++++
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~ 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC
Confidence 23 48888775 5555667999999998543311 35567778999999999999988888888876 57888884
No 62
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.77 E-value=1.3e-06 Score=91.54 Aligned_cols=168 Identities=16% Similarity=0.145 Sum_probs=120.1
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
++.+.++++.|+...|+.++ ++..+.++.+. .+++++++|.+.-... ++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~~-----------~~~~l~i~G~~~~~~~-----~~------~------- 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRRR-----------PPVRLVIVGDGPARAR-----LE------A------- 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhhc-----------CCceEEEEeCCchHHH-----Hh------c-------
Confidence 45678899999999999998 88877776441 2689999997532111 11 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecccc
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 570 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~ 570 (689)
... +|.|+.-.+.+-...+++.||+.+.||. .|..|++-+-||..|.+.|++-.|+.-|++++ +.+|+++
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~--~~~g~~~---- 314 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTD--GENGLLV---- 314 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcC--CcceEEc----
Confidence 133 6888776677777789999999999999 89999999999999999999876665544433 1233333
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCH
Q 005595 571 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 650 (689)
Q Consensus 571 d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~ 650 (689)
.+.+.+++.+.+ ..+..|+
T Consensus 315 ---------------------------------~~~~~~~l~~~i----------------------------~~l~~~~ 333 (364)
T cd03814 315 ---------------------------------EPGDAEAFAAAL----------------------------AALLADP 333 (364)
T ss_pred ---------------------------------CCCCHHHHHHHH----------------------------HHHHcCH
Confidence 233344444444 3345678
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 005595 651 KKWLKMSILSTAGSGKFSSDRTIAQYAKE 679 (689)
Q Consensus 651 ~~W~~~~~~~ma~~g~FS~drti~eY~~~ 679 (689)
+.+.+|..++......|||++.+++|.+-
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (364)
T cd03814 334 ELRRRMAARARAEAERRSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHh
Confidence 88888887776655589999999998864
No 63
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.69 E-value=5.1e-07 Score=92.94 Aligned_cols=181 Identities=15% Similarity=0.081 Sum_probs=122.5
Q ss_pred hhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhhhhc
Q 005595 296 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 375 (689)
Q Consensus 296 ai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~ 375 (689)
.+..++.+.++|+-..+.++.. ....+.++.-|-||++...+. +.
T Consensus 132 ~~~~~d~ii~~s~~~~~~~~~~-----~~~~~~~~~vi~~~~~~~~~~----~~-------------------------- 176 (353)
T cd03811 132 LYRRADKIVAVSEGVKEDLLKL-----LGIPPDKIEVIYNPIDIEEIR----AL-------------------------- 176 (353)
T ss_pred hccccceEEEeccchhhhHHHh-----hcCCccccEEecCCcChhhcC----cc--------------------------
Confidence 3445777888998877666532 222246788888999876662 10
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCC
Q 005595 376 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 376 ~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
.. .+. .. ...++.+.++++.|+.+.|+.++ ++..+.++.+- ..+
T Consensus 177 --~~---------~~~------------~~--~~~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~~----------~~~ 220 (353)
T cd03811 177 --AE---------EPL------------EL--GIPPDGPVILAVGRLSPQKGFDT-LIRAFALLRKE----------GPD 220 (353)
T ss_pred --cc---------hhh------------hc--CCCCCceEEEEEecchhhcChHH-HHHHHHHhhhc----------CCC
Confidence 00 000 11 23456789999999999999999 88888777542 126
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhH
Q 005595 456 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 535 (689)
Q Consensus 456 ~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mk 535 (689)
+++++.|.+...... .+..+.. ...+ +|.|....+ . ...++..||+.+.||+ .|..|++-+-
T Consensus 221 ~~l~i~G~~~~~~~~--------~~~~~~~----~~~~--~v~~~g~~~-~-~~~~~~~~d~~i~ps~--~e~~~~~~~E 282 (353)
T cd03811 221 ARLVILGDGPLREEL--------EALAKEL----GLAD--RVHFLGFQS-N-PYPYLKAADLFVLSSR--YEGFPNVLLE 282 (353)
T ss_pred ceEEEEcCCccHHHH--------HHHHHhc----CCCc--cEEEecccC-C-HHHHHHhCCEEEeCcc--cCCCCcHHHH
Confidence 899999987644332 1222221 1234 566655433 3 4568999999999999 8999999999
Q ss_pred HhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 536 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 536 a~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
||..|.+.|++-.|+.-|+++. +.+|+++.
T Consensus 283 a~~~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 312 (353)
T cd03811 283 AMALGTPVVATDCPGPREILED--GENGLLVP 312 (353)
T ss_pred HHHhCCCEEEcCCCChHHHhcC--CCceEEEC
Confidence 9999999999988887666554 35666654
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.61 E-value=1.8e-07 Score=100.83 Aligned_cols=168 Identities=20% Similarity=0.157 Sum_probs=116.5
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
...++++.|+...|+.+. ++.++.++.+- . ..+.++|.|.+...... ....+. ...+
T Consensus 204 ~~~i~~vgrl~~~K~~~~-li~a~~~l~~~---~-------~~~~l~i~G~g~~~~~~--------~~~~~~----~~~~ 260 (372)
T cd04949 204 PHKIITVARLAPEKQLDQ-LIKAFAKVVKQ---V-------PDATLDIYGYGDEEEKL--------KELIEE----LGLE 260 (372)
T ss_pred CCeEEEEEccCcccCHHH-HHHHHHHHHHh---C-------CCcEEEEEEeCchHHHH--------HHHHHH----cCCc
Confidence 356789999999999999 99888887652 1 25789999988654322 111121 1234
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCc-hhHHHHHHhcCcceeeeccccc
Q 005595 493 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVAE 571 (689)
Q Consensus 493 ~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG-~~vEi~~~~Gg~n~~~fG~~~d 571 (689)
+ .|.|. +|...+ ..+++.||+++.||+ .|+.|++.+-||..|.+.|++--| ...|+++. ++||+++
T Consensus 261 ~--~v~~~-g~~~~~-~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv----- 327 (372)
T cd04949 261 D--YVFLK-GYTRDL-DEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLV----- 327 (372)
T ss_pred c--eEEEc-CCCCCH-HHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEe-----
Confidence 4 45554 465554 567888999999999 899999999999999999987544 33333322 2344433
Q ss_pred cchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHH
Q 005595 572 QVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 651 (689)
Q Consensus 572 ~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~ 651 (689)
.+.+.++|.++|. .+..|++
T Consensus 328 --------------------------------~~~d~~~la~~i~----------------------------~ll~~~~ 347 (372)
T cd04949 328 --------------------------------PKGDIEALAEAII----------------------------ELLNDPK 347 (372)
T ss_pred --------------------------------CCCcHHHHHHHHH----------------------------HHHcCHH
Confidence 2223555555443 3456888
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHH
Q 005595 652 KWLKMSILSTAGSGKFSSDRTIAQY 676 (689)
Q Consensus 652 ~W~~~~~~~ma~~g~FS~drti~eY 676 (689)
.|.++..++.+.+..|||++.+++|
T Consensus 348 ~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 348 LLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999999988777799999998764
No 65
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.58 E-value=7.3e-07 Score=101.86 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=122.1
Q ss_pred eeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 493 (689)
Q Consensus 414 l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~ 493 (689)
..++++.|+.+.|+.+. ++.++.++.+- . .++++++.|.+... +.+.++++.. .+.+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l~~~---~-------p~~~l~i~G~G~~~--------~~l~~~i~~~----~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKAKKS---V-------PELTFDIYGEGGEK--------QKLQKIINEN----QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHHHhh---C-------CCeEEEEEECchhH--------HHHHHHHHHc----CCCC
Confidence 47889999999999999 98888887642 1 26889999987431 1233333321 1344
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCc-hhHHHHHHhcCcceeeecccccc
Q 005595 494 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVAEQ 572 (689)
Q Consensus 494 ~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG-~~vEi~~~~Gg~n~~~fG~~~d~ 572 (689)
+|.|+. +. +++ .+++.||+++.||+ .|+.|++-|-||..|.+.|++--| +..|+++. |+||+++-...+.
T Consensus 377 --~V~f~G-~~-~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~~~~~~ 447 (500)
T TIGR02918 377 --YIHLKG-HR-NLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIPIDEEE 447 (500)
T ss_pred --eEEEcC-CC-CHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEeCCccc
Confidence 566655 53 555 46899999999999 999999999999999999998754 67787766 6888887532110
Q ss_pred chhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH
Q 005595 573 VPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 652 (689)
Q Consensus 573 v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~ 652 (689)
.+.+++.++|. +.+..++ +++.
T Consensus 448 ---------------------------------~d~~~~~~~la------------------------~~I~~ll-~~~~ 469 (500)
T TIGR02918 448 ---------------------------------DDEDQIITALA------------------------EKIVEYF-NSND 469 (500)
T ss_pred ---------------------------------cchhHHHHHHH------------------------HHHHHHh-ChHH
Confidence 01233333332 1333344 4556
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHH
Q 005595 653 WLKMSILSTAGSGKFSSDRTIAQYAKE 679 (689)
Q Consensus 653 W~~~~~~~ma~~g~FS~drti~eY~~~ 679 (689)
+.+|..++...+..|||++.+++|.+-
T Consensus 470 ~~~~~~~a~~~a~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 470 IDAFHEYSYQIAEGFLTANIIEKWKKL 496 (500)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 888888877666689999999988753
No 66
>PLN02949 transferase, transferring glycosyl groups
Probab=98.55 E-value=6.3e-07 Score=101.46 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=89.0
Q ss_pred CCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 412 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 412 ~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
+.+.+.++.||...|+.++ +++.+.++.+-+. . ...+..++++|.+. +.+..- .+.+.++++.. .
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~~---~---~~~~~~LvIvG~~~~~~~~~~---~~eL~~la~~l----~ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKLD---A---DVPRPKLQFVGSCRNKEDEER---LQKLKDRAKEL----G 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhcc---c---cCCCcEEEEEeCCCCcccHHH---HHHHHHHHHHc----C
Confidence 3467888999999999999 9999988765211 0 01257898988873 333321 22344444422 3
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCch
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 550 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~ 550 (689)
+.+ +|.|+.+-+-+--..+++.||+++.+|. .|.-|++-+-||..|+++|++..|+
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gG 388 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAG 388 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCC
Confidence 566 7999988776666678899999999999 9999999999999999999986554
No 67
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.55 E-value=5.9e-06 Score=91.99 Aligned_cols=113 Identities=13% Similarity=-0.051 Sum_probs=77.1
Q ss_pred CCCeeEeecccchhh--hhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 411 PNSLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 411 p~~l~~~~vrR~~ey--KR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
++.+.++++.|+..+ |+.+. ++..+.+ +. .+++++++|++.|...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~---l~----------~~~~L~ivG~g~~~~~------------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMA---LG----------DKIELHTFGKFSPFTA------------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHh---CC----------CCeEEEEEcCCCcccc-------------------
Confidence 455677788885544 55555 5554443 21 1578999998755321
Q ss_pred cCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeec
Q 005595 489 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 567 (689)
Q Consensus 489 p~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG 567 (689)
. +|.++.- .+..--..++++||++.+||+ .|+.|+.-+-||.-|++.|+|.-|+..|+++. .||+++.
T Consensus 286 ----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv~ 354 (405)
T PRK10125 286 ----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTVS 354 (405)
T ss_pred ----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEEC
Confidence 1 2333211 133333457899999999999 99999999999999999999998988776543 4677774
No 68
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.51 E-value=2.3e-06 Score=82.20 Aligned_cols=130 Identities=22% Similarity=0.230 Sum_probs=94.8
Q ss_pred CCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 409 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 409 ~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
...+.+++.++.|+...|+.++ ++..+.++.+-.. ..+.++|+|++..... +....+..
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~~~~~~~--------~~~~~~~~--- 69 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVGDGEYKKE--------LKNLIEKL--- 69 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEESHCCHHHH--------HHHHHHHT---
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEcccccccc--------cccccccc---
Confidence 3467899999999999999999 9999998875211 2689999994333322 23333322
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 489 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 489 p~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
.+.. +|.|+....-.--..++..||+++.||+ .|..|++-+-||..|.++|++..|..-|++... .||++|
T Consensus 70 -~~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~ 140 (172)
T PF00534_consen 70 -NLKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLF 140 (172)
T ss_dssp -TCGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEE
T ss_pred -cccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc--cceEEe
Confidence 2344 6888888776666778888999999999 799999999999999999999888876666542 355555
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.49 E-value=1.1e-06 Score=90.41 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=114.1
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
.+...++++.|+...|+.+. ++..+.++.+. . .++++++.|.+..... +.+..+.. .
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~~-~---------~~~~l~i~G~~~~~~~--------~~~~~~~~----~ 232 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDL-LIEAWAKIAKK-H---------PDWKLRIVGDGPEREA--------LEALIKEL----G 232 (348)
T ss_pred CCCcEEEEEEeeccccCHHH-HHHHHHHHHhc-C---------CCeEEEEEeCCCCHHH--------HHHHHHHc----C
Confidence 34568899999999999999 88888877551 1 2689999998754322 22222222 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhH-HHHHHhcCcceeeeccc
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV-EIRQEIGEENFFLFGAV 569 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~v-Ei~~~~Gg~n~~~fG~~ 569 (689)
... +|.|.. + .+-...++..||+.+.||+ +|..|++-+-||..|.+.|++-.|... |+.+. +++|++|
T Consensus 233 ~~~--~v~~~g-~-~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~--- 301 (348)
T cd03820 233 LED--RVILLG-F-TKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLV--- 301 (348)
T ss_pred CCC--eEEEcC-C-cchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEe---
Confidence 333 455554 4 3445577888999999999 899999999999999999987544322 21211 1233333
Q ss_pred cccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcC
Q 005595 570 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKD 649 (689)
Q Consensus 570 ~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~ 649 (689)
.+.+.+++.+.|. .+..|
T Consensus 302 ----------------------------------~~~~~~~~~~~i~----------------------------~ll~~ 319 (348)
T cd03820 302 ----------------------------------PNGDVEALAEALL----------------------------RLMED 319 (348)
T ss_pred ----------------------------------CCCCHHHHHHHHH----------------------------HHHcC
Confidence 2334455555543 23467
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHH
Q 005595 650 QKKWLKMSILSTAGSGKFSSDRTIAQYA 677 (689)
Q Consensus 650 ~~~W~~~~~~~ma~~g~FS~drti~eY~ 677 (689)
++.+.+|..++......|||++.+++|.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 320 EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 8888888777644445899999999885
No 70
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.48 E-value=5.6e-06 Score=89.76 Aligned_cols=122 Identities=11% Similarity=0.050 Sum_probs=83.4
Q ss_pred CeeEeecccchhh--hhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 413 SLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 413 ~l~~~~vrR~~ey--KR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
.+.++++.|+..+ |+.+. ++..+.++ . .++++++.|.+.. .+. +.++++.. .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~-l~~a~~~~---~----------~~~~l~ivG~g~~-~~~-------l~~~~~~~----~ 233 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKE-LFDGLSQT---T----------GEWQLHIIGDGSD-FEK-------CKAYSREL----G 233 (359)
T ss_pred CcEEEEEEEEecccCcCHHH-HHHHHHhh---C----------CCeEEEEEeCCcc-HHH-------HHHHHHHc----C
Confidence 4567889998754 77766 65555433 1 1689999998743 222 33333322 2
Q ss_pred CCCcceEEEEcCCCH--HHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeec-CchhHHHHHHhcCcceeee
Q 005595 491 VNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 491 ~~~~lkVvF~enY~~--~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstl-DG~~vEi~~~~Gg~n~~~f 566 (689)
+++ +|.|..--+. +.....++.||+++.||+ .|+.|.+-.-||..|.+.|++. .|...|+++. +.||+++
T Consensus 234 l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv 306 (359)
T PRK09922 234 IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELY 306 (359)
T ss_pred CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEE
Confidence 455 6777754332 445556788999999999 8999999999999999999986 5666666544 4566665
No 71
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.46 E-value=1.2e-06 Score=92.89 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=79.1
Q ss_pred eeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 493 (689)
Q Consensus 414 l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~ 493 (689)
.+++++.|+.++|+.++ ++..+.++.. .+++++.|.+.......+ .+.+.. ...+
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l~~-------------~~~l~ivG~~~~~~~~~~----~~~~~~-------~~~~ 248 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKSNS-------------GKKLVIVGNADHNTPYGK----LLKEKA-------AADP 248 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhhcc-------------CceEEEEcCCCCcchHHH----HHHHHh-------CCCC
Confidence 35679999999999998 8777654311 578999999855443322 222111 1234
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCc-cCCCcchhHHhhcCceEeeecCchhHH
Q 005595 494 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 494 ~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~-EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
+|.|+.-..-+-....+..||+++.||. . |.+|++-+-||..|.+.|+|..|...|
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e 305 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNRE 305 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccce
Confidence 6888765444444566677899999998 6 999999999999999999987666543
No 72
>PHA01630 putative group 1 glycosyl transferase
Probab=98.44 E-value=1.7e-06 Score=93.82 Aligned_cols=185 Identities=10% Similarity=-0.032 Sum_probs=117.8
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
.+++++++|+.++|+.++ ++..+.++.+- . .+.+++++|.+ +... + +.. +.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~~---~-------~~~~llivG~~-~~~~--~-----l~~----------~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQNE---G-------YDFYFLIKSSN-MLDP--R-----LFG----------LN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHhh---C-------CCEEEEEEeCc-ccch--h-----hcc----------cc
Confidence 357789999999999999 98888777541 0 25788888843 1111 0 100 12
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecccccc
Q 005595 493 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 572 (689)
Q Consensus 493 ~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~ 572 (689)
+ ...++ .-+--..++++||+++.||+ .|+-|+.-+-||..|.+.|+|-.|++-|++.. ++||+++....-.
T Consensus 193 ~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~~~~~ 263 (331)
T PHA01630 193 G--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKSGRKP 263 (331)
T ss_pred c--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeeecccc
Confidence 2 11112 22344567899999999999 89999999999999999999999998887655 6888887543211
Q ss_pred chhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH
Q 005595 573 VPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 652 (689)
Q Consensus 573 v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~ 652 (689)
.. .. .+ ....|.+.+.+.+++++.+. ++.... ++++
T Consensus 264 ~~-~~---------~~--------~~~~G~~v~~~~~~~~~~ii-------------------------~~l~~~-~~~~ 299 (331)
T PHA01630 264 KL-WY---------TN--------PIHVGYFLDPDIEDAYQKLL-------------------------EALANW-TPEK 299 (331)
T ss_pred cc-cc---------cC--------CcccccccCCCHHHHHHHHH-------------------------HHHhCC-CHHH
Confidence 00 00 00 11335444556666665543 222211 1355
Q ss_pred HHHHHHHHhcc-CCCCChHHHHHHHHHH
Q 005595 653 WLKMSILSTAG-SGKFSSDRTIAQYAKE 679 (689)
Q Consensus 653 W~~~~~~~ma~-~g~FS~drti~eY~~~ 679 (689)
+.+++.++-.. ...|||++++++|.+-
T Consensus 300 ~~~~~~~~~~~~~~~fs~~~ia~k~~~l 327 (331)
T PHA01630 300 KKENLEGRAILYRENYSYNAIAKMWEKI 327 (331)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 66655554321 2489999999998764
No 73
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.44 E-value=8.1e-06 Score=97.36 Aligned_cols=258 Identities=13% Similarity=0.162 Sum_probs=151.7
Q ss_pred CCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHHH
Q 005595 181 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 260 (689)
Q Consensus 181 ~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~ 260 (689)
+-++|-+||-|=.++ |.+||... .+.++.|.-|+|-|++ .+-+.||..-+|+..+
T Consensus 133 ~~d~vwvhDYhl~l~-p~~lr~~~-------------~~~~igfFlH~pfP~~-------~~f~~lp~~~~ll~~l---- 187 (726)
T PRK14501 133 PGDVVWVHDYQLMLL-PAMLRERL-------------PDARIGFFLHIPFPSF-------EVFRLLPWREEILEGL---- 187 (726)
T ss_pred CCCEEEEeCchhhhH-HHHHHhhC-------------CCCcEEEEeeCCCCCh-------HHHhhCCChHHHHHHH----
Confidence 447999999999886 89998742 4578999999997765 2335689777776554
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCC-ccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCc
Q 005595 261 IAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 339 (689)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~ 339 (689)
++.| +|..+ ... .-|+...|.+....- +.+ . ...+.+ ...++.-+-||||+
T Consensus 188 -------l~~D--------ligf~-t~~~~r~Fl~~~~~~l~~~-~~~----~---~~~~~g----r~~~v~v~p~GID~ 239 (726)
T PRK14501 188 -------LGAD--------LIGFH-TYDYVRHFLSSVLRVLGYE-TEL----G---EIRLGG----RIVRVDAFPMGIDY 239 (726)
T ss_pred -------hcCC--------eEEeC-CHHHHHHHHHHHHHHcCCc-cCC----C---eEEECC----EEEEEEEEECeEcH
Confidence 2222 11110 001 224444443322210 000 0 001111 12246667799998
Q ss_pred ccccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeec
Q 005595 340 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 419 (689)
Q Consensus 340 ~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~v 419 (689)
.++. |.. .+++ .+ +..++| ++.. ++..+++.|
T Consensus 240 ~~f~----~~~---------------------------~~~~-------~~-~~~~~l----r~~~-----~~~~~il~V 271 (726)
T PRK14501 240 DKFH----NSA---------------------------QDPE-------VQ-EEIRRL----RQDL-----RGRKIILSI 271 (726)
T ss_pred HHHH----HHh---------------------------cCch-------HH-HHHHHH----HHHc-----CCCEEEEEe
Confidence 7772 211 1111 11 111112 1221 356799999
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecC----CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcc
Q 005595 420 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA----FATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 495 (689)
Q Consensus 420 rR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa----~P~y~~aK~iIk~i~~~a~~in~dp~~~~~l 495 (689)
.|+...|+..+ ++...+++++ . .|+.+ ..+++|+.|.+ -|.|. ++-+.+.+++..||.--...+..
T Consensus 272 gRl~~~Kgi~~-~l~A~~~ll~--~-~p~~~---~~v~lv~v~~~sr~~~~~~~---~l~~~~~~~v~~in~~~~~~~~~ 341 (726)
T PRK14501 272 DRLDYTKGIPR-RLLAFERFLE--K-NPEWR---GKVRLVQVAVPSRTGVPQYQ---EMKREIDELVGRINGEFGTVDWT 341 (726)
T ss_pred cCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcchHHHH---HHHHHHHHHHHHHHhhcCCCCcc
Confidence 99999999999 9999999875 2 33321 24677766632 24443 34456666666665211111112
Q ss_pred eEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHhhc-----CceEeeecCchh
Q 005595 496 KVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGAN 551 (689)
Q Consensus 496 kVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~N-----G~l~lstlDG~~ 551 (689)
.|+++.+ .+-+---.++++||+++.||. .|.=|+.-+-||.- |++.+|+.-|+-
T Consensus 342 pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 342 PIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred eEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchh
Confidence 3665554 455555679999999999999 89999998888888 668887665653
No 74
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.41 E-value=1.3e-05 Score=96.50 Aligned_cols=257 Identities=15% Similarity=0.168 Sum_probs=145.8
Q ss_pred CCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHHH
Q 005595 181 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 260 (689)
Q Consensus 181 ~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~ 260 (689)
+-++|=+||=|=.++ |.+||... .+.++.|..|+|-|. ..+-+.||..-+|+..+-
T Consensus 147 ~~d~vWvhDYhL~ll-p~~lR~~~-------------~~~~igfFlHiPFPs-------~e~fr~lp~r~~il~gll--- 202 (797)
T PLN03063 147 EGDVVWCHDYHLMFL-PQYLKEYN-------------NKMKVGWFLHTPFPS-------SEIYKTLPSRSELLRAVL--- 202 (797)
T ss_pred CCCEEEEecchhhhH-HHHHHHhC-------------CCCcEEEEecCCCCC-------HHHHhhCCCHHHHHHHHh---
Confidence 347888999998886 89999743 457799999999544 344467898777776653
Q ss_pred HHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcc
Q 005595 261 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 340 (689)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~ 340 (689)
+-| +|.. ...+.+.-=+..|+.+-|++.....+. + .-...++.-+-||||+.
T Consensus 203 --------~aD--------ligF----~t~~y~r~Fl~~~~r~l~~~~~~~~i~----~----~gr~~~I~viP~GID~~ 254 (797)
T PLN03063 203 --------TAD--------LIGF----HTYDFARHFLSACTRILGVEGTHEGVV----D----QGKVTRVAVFPIGIDPE 254 (797)
T ss_pred --------cCC--------EEEe----CCHHHHHHHHHHHHHHhCccccCCceE----E----CCeEEEEEEEecccCHH
Confidence 211 1221 011111111222222333332211110 0 01123466778999977
Q ss_pred cccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecc
Q 005595 341 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 420 (689)
Q Consensus 341 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vr 420 (689)
.+. +.. ..+ +.++..+ + +++.++ +..++..|.
T Consensus 255 ~f~----~~~---------------------------~~~-------~~~~~~~-~----lr~~~~-----~~~lIl~Vg 286 (797)
T PLN03063 255 RFI----NTC---------------------------ELP-------EVKQHMK-E----LKRFFA-----GRKVILGVD 286 (797)
T ss_pred HHH----HHh---------------------------cCh-------hHHHHHH-H----HHHhcC-----CCeEEEEec
Confidence 662 111 111 1111111 1 122332 356888999
Q ss_pred cchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEE-EecC---CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcce
Q 005595 421 RIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKA---FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLK 496 (689)
Q Consensus 421 R~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If-~GKa---~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lk 496 (689)
|+..-|+..+ +|...+++++- .|+.+ ..+.+|. +|-. -|.|. ++-+.+.++...||..-...+...
T Consensus 287 RLd~~KGi~~-lL~Afe~lL~~---~P~~~---~kvvLvqia~psr~~~~~y~---~l~~~v~~l~g~In~~~g~~~~~p 356 (797)
T PLN03063 287 RLDMIKGIPQ-KYLAFEKFLEE---NPEWR---DKVMLVQIAVPTRNDVPEYQ---KLKSQVHELVGRINGRFGSVSSVP 356 (797)
T ss_pred ccccccCHHH-HHHHHHHHHHh---Ccccc---CcEEEEEEecCCCCchHHHH---HHHHHHHHHHHHhhcccccCCCce
Confidence 9999999999 99999998752 34321 2356553 3322 13333 344556666655653211111223
Q ss_pred EEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCc-----eEeeecCc
Q 005595 497 VVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-----LIIGTLDG 549 (689)
Q Consensus 497 VvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~-----l~lstlDG 549 (689)
|+++.+ .+-+---.++++||+++.||. .|.=|+.-+-||.-|. +.+|-..|
T Consensus 357 v~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G 413 (797)
T PLN03063 357 IHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAG 413 (797)
T ss_pred eEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcC
Confidence 666654 344444568899999999999 8999999999988885 45544444
No 75
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.39 E-value=5.9e-07 Score=87.78 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=95.0
Q ss_pred ecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceE
Q 005595 418 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 497 (689)
Q Consensus 418 ~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkV 497 (689)
++.|+..+|+.++ ++..+.++.+.. .+++++|.|++.+.+...+. +... ...+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~~----------~~~~~~i~G~~~~~~~~~~~----~~~~--------~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKERG----------PDLKLVIAGDGPEREYLEEL----LAAL--------LLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHhC----------CCeEEEEEeCCCChHHHHHH----HHhc--------CCcc--cE
Confidence 8889999999999 988888876521 26899999999987765431 1111 2244 78
Q ss_pred EEEcCC-CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 498 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 498 vF~enY-~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
.|+..+ ..+....+.++||+.+.||+ .|++|++-+-||..|.+.|+|.+|++-|+++. +++||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 888887 67788888889999999999 89999999999999999999999998665433 3566654
No 76
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.38 E-value=9.2e-06 Score=84.80 Aligned_cols=115 Identities=15% Similarity=0.064 Sum_probs=89.4
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
.+.+.++++.|+..+|+.++ ++..+..+.+ ..+++++.|.+...+..-+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~------------~~~~l~i~G~~~~~~~~~~~~-------~-------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR------------GDIELVIVGNGLELEEESYEL-------E-------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh------------cCcEEEEEcCchhhhHHHHhh-------c--------
Confidence 45578899999999999998 8888776644 157999999887776543211 1
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
... +|.|+...+-+....+++.||+.++||+ ..|.+|++-+-||..|.+.|+|--|..-|+.+
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~ 303 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVR 303 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhc
Confidence 133 6888888877778889999999999986 24999999999999999999987776655443
No 77
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.34 E-value=1.2e-05 Score=93.56 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=78.6
Q ss_pred EeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcc
Q 005595 416 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 495 (689)
Q Consensus 416 ~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~l 495 (689)
..+|.|++..|+.+. ++..+..+.+ . ...++++++|.|.-. . .+.+.+... . +
T Consensus 549 iLfVGRLa~EKGld~-LLeAla~L~~--~--------~pnvrLvIVGDGP~r-e-------eLe~la~eL------g--L 601 (794)
T PLN02501 549 AYFLGKMVWAKGYRE-LIDLLAKHKN--E--------LDGFNLDVFGNGEDA-H-------EVQRAAKRL------D--L 601 (794)
T ss_pred eEEEEcccccCCHHH-HHHHHHHHHh--h--------CCCeEEEEEcCCccH-H-------HHHHHHHHc------C--C
Confidence 567889999999999 8888776643 1 125899999988422 2 133334321 1 2
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchh
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 551 (689)
Q Consensus 496 kVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~ 551 (689)
+|.|+.. ...+..+++++||+.+||+ .|.-|+.-+-||..|.+.|+|..|++
T Consensus 602 ~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~ 653 (794)
T PLN02501 602 NLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSN 653 (794)
T ss_pred EEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCC
Confidence 5777643 3455678999999999999 99999999999999999999976654
No 78
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.31 E-value=1.1e-05 Score=89.62 Aligned_cols=229 Identities=17% Similarity=0.170 Sum_probs=149.9
Q ss_pred chhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhH
Q 005595 291 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 370 (689)
Q Consensus 291 nm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 370 (689)
.+....+..++.|.+||+-..+.+++ .|+ ..+.++.-+.||++.....
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~-~~~----~~~~ki~vi~~gv~~~~~~--------------------------- 222 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQK-RYP----AYKEKIKVSYLGVSDPGII--------------------------- 222 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHH-HCC----CccccEEEEECCccccccc---------------------------
Confidence 33444567789999999988877764 232 2345666677887753320
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCcccc
Q 005595 371 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 450 (689)
Q Consensus 371 ~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~ 450 (689)
+ . ....+.+.++++.|+.+.||.++ ++..+.++.+. .|+
T Consensus 223 -------~---------~-------------------~~~~~~~~il~~Grl~~~Kg~~~-li~a~~~l~~~---~p~-- 261 (407)
T cd04946 223 -------S---------K-------------------PSKDDTLRIVSCSYLVPVKRVDL-IIKALAALAKA---RPS-- 261 (407)
T ss_pred -------C---------C-------------------CCCCCCEEEEEeeccccccCHHH-HHHHHHHHHHh---CCC--
Confidence 0 0 00123577899999999999999 98888887652 121
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCC-HHHHHhhc-cCcccccccCCCCccC
Q 005595 451 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLI-PGSELSQHISTAGMEA 528 (689)
Q Consensus 451 ~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~-~~lA~~l~-~g~Dv~l~~s~~~~Ea 528 (689)
..+.+++.|.+... .. +.++++.. ...+ +|.|+--.+ .++.+.+- +.+|++.++|. .|+
T Consensus 262 ---~~l~~~iiG~g~~~-~~-------l~~~~~~~----~~~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg 322 (407)
T cd04946 262 ---IKIKWTHIGGGPLE-DT-------LKELAESK----PENI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEG 322 (407)
T ss_pred ---ceEEEEEEeCchHH-HH-------HHHHHHhc----CCCc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--ccc
Confidence 25677888876432 11 23333211 1233 677765444 34555554 35899999999 999
Q ss_pred CCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCCh
Q 005595 529 SGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDY 608 (689)
Q Consensus 529 sGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~ 608 (689)
-|++-|-||..|.+.|+|-.|+..|++++ ++||+++-.. + +.
T Consensus 323 ~p~~llEAma~G~PVIas~vgg~~e~i~~--~~~G~l~~~~-~-----------------------------------~~ 364 (407)
T cd04946 323 LPVSIMEAMSFGIPVIATNVGGTPEIVDN--GGNGLLLSKD-P-----------------------------------TP 364 (407)
T ss_pred ccHHHHHHHHcCCCEEeCCCCCcHHHhcC--CCcEEEeCCC-C-----------------------------------CH
Confidence 99999999999999999988888777654 3566665331 1 23
Q ss_pred HHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005595 609 NPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 677 (689)
Q Consensus 609 ~~l~~~l~~~~~~~~~D~~~v~~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~ 677 (689)
+++.++|. + +..|++.+.+|..++-... ..|||+...++|+
T Consensus 365 ~~la~~I~-------------------------~---ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLS-------------------------K---FIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHH-------------------------H---HHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 44444443 2 2347777777777665543 3899999988875
No 79
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.21 E-value=1.6e-05 Score=87.38 Aligned_cols=165 Identities=7% Similarity=0.054 Sum_probs=104.7
Q ss_pred hchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHhh
Q 005595 293 ANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVG 372 (689)
Q Consensus 293 ~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~ 372 (689)
-+..+..++.|-+||+--.+.+++. ....+.++.-|.|||+...+ .|.-
T Consensus 166 e~~~~~~ad~vi~~S~~~~~~l~~~-----~~~~~~~v~vipngvd~~~f----~~~~---------------------- 214 (397)
T TIGR03087 166 ERAIAARFDAATFVSRAEAELFRRL-----APEAAGRITAFPNGVDADFF----SPDR---------------------- 214 (397)
T ss_pred HHHHHhhCCeEEEcCHHHHHHHHHh-----CCCCCCCeEEeecccchhhc----CCCc----------------------
Confidence 3445667999999999766666531 12234678888999998766 2210
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHH-HHhhcCccccC
Q 005595 373 LRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK-KLKEMSPQERK 451 (689)
Q Consensus 373 l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~-~i~~~~~~~~~ 451 (689)
+ . . ....++.++++++.|+..+|+.+. ++..+.... .++...
T Consensus 215 ------~------~-~------------------~~~~~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~----- 257 (397)
T TIGR03087 215 ------D------Y-P------------------NPYPPGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR----- 257 (397)
T ss_pred ------c------c-c------------------CCCCCCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC-----
Confidence 0 0 0 011245578999999999999987 765444322 232201
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
..++++++|.+.. . .+.+++. .. +|.|...-+ ++ ..++++||+++.||+. .|..|+
T Consensus 258 --p~~~l~ivG~g~~--~-------~~~~l~~--------~~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~-~eG~~~ 313 (397)
T TIGR03087 258 --PAAEFYIVGAKPS--P-------AVRALAA--------LP--GVTVTGSVA-DV-RPYLAHAAVAVAPLRI-ARGIQN 313 (397)
T ss_pred --CCcEEEEECCCCh--H-------HHHHhcc--------CC--CeEEeeecC-CH-HHHHHhCCEEEecccc-cCCccc
Confidence 2589999998753 1 1233332 12 366654333 34 4678999999999972 255666
Q ss_pred chhHHhhcCceEeeecCc
Q 005595 532 SNMKFSLNGCLIIGTLDG 549 (689)
Q Consensus 532 s~Mka~~NG~l~lstlDG 549 (689)
.-+-||..|.+.|+|-.|
T Consensus 314 ~~lEAma~G~PVV~t~~~ 331 (397)
T TIGR03087 314 KVLEAMAMAKPVVASPEA 331 (397)
T ss_pred HHHHHHHcCCCEEecCcc
Confidence 789999999999988543
No 80
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.19 E-value=1.1e-05 Score=90.00 Aligned_cols=193 Identities=15% Similarity=0.096 Sum_probs=128.6
Q ss_pred hhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhHh
Q 005595 292 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 371 (689)
Q Consensus 292 m~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~ 371 (689)
+-.+++..|+.|-++|.--.+.+++ .|+. +.++.-|.|||+...+. |
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~-~~~~-----~~~~~vi~~gvd~~~~~----~----------------------- 228 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS-LWKR-----NTKPSIVYPPCDVEELL----K----------------------- 228 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH-HhCc-----CCCcEEEcCCCCHHHhc----c-----------------------
Confidence 4556778899999999865555553 2321 13677778888764441 0
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccC
Q 005595 372 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 451 (689)
Q Consensus 372 ~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~ 451 (689)
. - . ..+++...++++.|+...|+.++ +++.+..+.+-. |..
T Consensus 229 -------~------~-~-------------------~~~~~~~~il~vgr~~~~K~~~~-li~A~~~l~~~~---~~~-- 269 (419)
T cd03806 229 -------L------P-L-------------------DEKTRENQILSIAQFRPEKNHPL-QLRAFAKLLKRL---PEE-- 269 (419)
T ss_pred -------c------c-c-------------------ccccCCcEEEEEEeecCCCCHHH-HHHHHHHHHHhC---ccc--
Confidence 0 0 0 00234568999999999999999 999988877521 110
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCc
Q 005595 452 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 531 (689)
Q Consensus 452 ~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGT 531 (689)
...+++++++|.+...+.. +..+.+.++++.. .+.+ +|.|+..-+-+--..+++.||+++.+|. .|.-|.
T Consensus 270 ~~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l----~l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi 339 (419)
T cd03806 270 IKEKIKLVLIGSCRNEDDE--KRVEDLKLLAKEL----GLED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGI 339 (419)
T ss_pred ccCceEEEEEcCCCCcccH--HHHHHHHHHHHHh----CCCC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCccc
Confidence 0024899999987544321 1223444555432 2456 8999987666666788899999999999 799999
Q ss_pred chhHHhhcCceEeeecCchh-HHHHHHh-cCcceeee
Q 005595 532 SNMKFSLNGCLIIGTLDGAN-VEIRQEI-GEENFFLF 566 (689)
Q Consensus 532 s~Mka~~NG~l~lstlDG~~-vEi~~~~-Gg~n~~~f 566 (689)
+-.-||..|.++|++-.|.- -|+++.. .|++||++
T Consensus 340 ~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 340 GVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred HHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 99999999999999876543 3444311 24556654
No 81
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.11 E-value=1e-05 Score=86.69 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=81.9
Q ss_pred eeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 493 (689)
Q Consensus 414 l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~ 493 (689)
.++.++.|+..+|+++. ++..+.++ |+++++.|.+....+ +.+ . ..+
T Consensus 196 ~~il~~G~~~~~K~~~~-li~a~~~~---------------~~~l~ivG~g~~~~~--------l~~--~-------~~~ 242 (351)
T cd03804 196 DYYLSVGRLVPYKRIDL-AIEAFNKL---------------GKRLVVIGDGPELDR--------LRA--K-------AGP 242 (351)
T ss_pred CEEEEEEcCccccChHH-HHHHHHHC---------------CCcEEEEECChhHHH--------HHh--h-------cCC
Confidence 45789999999999998 77766432 467999998743211 111 1 234
Q ss_pred cceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 005595 494 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 556 (689)
Q Consensus 494 ~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~ 556 (689)
+|.|+..-+-+-...++++||+++.||+ |..|++-+-||..|.+.|++..|+..|+++
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~ 300 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVI 300 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceee
Confidence 7999988888888899999999999987 899999999999999999997777655443
No 82
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.96 E-value=4.9e-05 Score=86.07 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=88.7
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
.+...+|.|++..|+.+. ++..+.++.+-. ..+.++++|.|.-..+ +.+.++.. +
T Consensus 228 ~~~~l~vGRL~~eK~~~~-Li~a~~~l~~~~----------~~~~l~ivGdGp~~~~--------L~~~a~~l------~ 282 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKE-LLKLLHKHQKEL----------SGLEVDLYGSGEDSDE--------VKAAAEKL------E 282 (462)
T ss_pred ceEEEEEecCcccCCHHH-HHHHHHHHHhhC----------CCeEEEEECCCccHHH--------HHHHHHhc------C
Confidence 345789999999999999 888877765411 2478999999943322 44455432 1
Q ss_pred CcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeee
Q 005595 493 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 493 ~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~f 566 (689)
+.+.|..++. ..+.+++++||+++||+ .|.-|+.-+-||..|.+.|++..|.+ |++.. +.|++.+
T Consensus 283 --l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~ 347 (462)
T PLN02846 283 --LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTY 347 (462)
T ss_pred --CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEec
Confidence 2355567764 34579999999999999 99999999999999999999987764 65554 4566655
No 83
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=97.88 E-value=0.00011 Score=79.35 Aligned_cols=116 Identities=15% Similarity=0.056 Sum_probs=94.2
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
.+..+++.++|+.--||.|| ++.+|.+..+- . ..+.|||+|-|--.+.- .++-+++ .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~~---~-------p~vrfii~GDGPk~i~l--------ee~lEk~----~ 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCDK---H-------PEVRFIIIGDGPKRIDL--------EEMLEKL----F 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHhc---C-------CCeeEEEecCCcccchH--------HHHHHHh----h
Confidence 34589999999999999999 99999998762 1 25899999999766653 2223322 2
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
..+ ||+++-.-.=+--+.++.-.|++||+|. .||=|+.-.-||--|-+.+||.-|+-.|
T Consensus 250 l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpe 308 (426)
T KOG1111|consen 250 LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPE 308 (426)
T ss_pred ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCccc
Confidence 455 8999988777777888888899999999 9999999999999999999997777544
No 84
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.80 E-value=0.0025 Score=72.79 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=94.3
Q ss_pred HHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcC-CHHHHHHHHHHH
Q 005595 401 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT-YTNAKRIVKLVN 479 (689)
Q Consensus 401 i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~-y~~aK~iIk~i~ 479 (689)
+++++| +..++..|-|+..-|+... .|...+++++ + +|+.+ ..+++|..|.+.-. -..-+++.+.|.
T Consensus 278 lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~--~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~~v~ 345 (487)
T TIGR02398 278 IRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLE--R-RPELL---GKVTLVTACVPAASGMTIYDELQGQIE 345 (487)
T ss_pred HHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEeCCCcccchHHHHHHHHHH
Confidence 345666 3568899999999999999 9999999976 3 45432 34777776655422 233355678888
Q ss_pred HHHhhhcCCcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHh-----hcCceEeeecCch
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-----LNGCLIIGTLDGA 550 (689)
Q Consensus 480 ~~a~~in~dp~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~-----~NG~l~lstlDG~ 550 (689)
+++..||..=.-.+--.|+++.+ .+-+---.++..|||.+-+|+ .|.=++.-.-++ ..|+|.+|-.-|+
T Consensus 346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGa 420 (487)
T TIGR02398 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGA 420 (487)
T ss_pred HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccc
Confidence 88888875422222234666655 466666779999999999999 776666655443 3689999866665
No 85
>PLN02275 transferase, transferring glycosyl groups
Probab=97.26 E-value=0.0021 Score=70.48 Aligned_cols=136 Identities=13% Similarity=0.089 Sum_probs=92.3
Q ss_pred eeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccc-------cCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhc
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 486 (689)
Q Consensus 414 l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~-------~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in 486 (689)
.+++.+.|+..+|+.+. ++..+..+......-... ......+++++.|.|.-. +. +.+.++..
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-~~-------l~~~~~~~- 283 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK-AM-------YEEKISRL- 283 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCH-HH-------HHHHHHHc-
Confidence 46678899999999998 888877764321000000 000125899999998532 21 33333321
Q ss_pred CCcCCCCcceEEEEcCC-CHHHHHhhccCcccccccCCCC-ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCccee
Q 005595 487 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 564 (689)
Q Consensus 487 ~dp~~~~~lkVvF~enY-~~~lA~~l~~g~Dv~l~~s~~~-~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~ 564 (689)
.+. +|+|..+| .-+--..++++||+++.++... .|..|..-+-||.-|.+.|+|..|..-|++++ ++|||
T Consensus 284 ---~l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G~ 355 (371)
T PLN02275 284 ---NLR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNGL 355 (371)
T ss_pred ---CCC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCeE
Confidence 123 48888774 4555567899999998653221 27778889999999999999999998888876 68899
Q ss_pred eec
Q 005595 565 LFG 567 (689)
Q Consensus 565 ~fG 567 (689)
++.
T Consensus 356 lv~ 358 (371)
T PLN02275 356 LFS 358 (371)
T ss_pred EEC
Confidence 986
No 86
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=97.15 E-value=0.0024 Score=72.49 Aligned_cols=143 Identities=16% Similarity=0.096 Sum_probs=101.7
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEec--CCcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK--AFATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GK--a~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
-...|+.-+-|+..-|+++| +|.+..++..... .+ .......+|+|+ -.+..-.-.+.++.+.++.+.++
T Consensus 271 ~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~----~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-- 342 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EP----SISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-- 342 (495)
T ss_pred ccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CC----CCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC--
Confidence 34688899999999999999 9998888775432 12 223567778773 35566666677888888887653
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeecc
Q 005595 489 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 568 (689)
Q Consensus 489 p~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~ 568 (689)
...+ .|.|+.--+=+.--++++-|.+.+-+|. .|+=|+--.-||-.|-+.|+|--|+=+||+++ +.|||..-.
T Consensus 343 -l~g~--~v~~~~s~~~~~~yrl~adt~~v~~qPa--~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~--~~tG~l~dp 415 (495)
T KOG0853|consen 343 -LLGQ--FVWFLPSTTRVAKYRLAADTKGVLYQPA--NEHFGIVPIEAMACGLPVVATNNGGPAEIVVH--GVTGLLIDP 415 (495)
T ss_pred -ccCc--eEEEecCCchHHHHHHHHhcceEEecCC--CCCccceeHHHHhcCCCEEEecCCCceEEEEc--CCcceeeCC
Confidence 1234 4666676655555566666666666665 89999999999999999999977777666655 455555544
No 87
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.13 E-value=0.01 Score=59.93 Aligned_cols=118 Identities=18% Similarity=0.199 Sum_probs=83.7
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 492 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~ 492 (689)
...+.++.|+.+.|+.++ ++..+..+.+.. ....+++.|.+... +. .+..+..... ..
T Consensus 199 ~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~----------~~~~~~~~g~~~~~----~~---~~~~~~~~~~----~~ 256 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDL-LIEAAAKLKKRG----------PDIKLVIVGDGPER----RE---ELEKLAKKLG----LE 256 (381)
T ss_pred ceEEEEeeccChhcCHHH-HHHHHHHhhhhc----------CCeEEEEEcCCCcc----HH---HHHHHHHHhC----CC
Confidence 378999999999999999 888877776521 12789999998876 11 1222333221 12
Q ss_pred CcceEEEEcCCC-HHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 005595 493 SYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 557 (689)
Q Consensus 493 ~~lkVvF~enY~-~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~ 557 (689)
+ +|.|+-.-. ..+.. ++..||++++||. .|+-|..-+-||..|++.|++.-|+..|++..
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~ 317 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVED 317 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcC
Confidence 3 577744344 45555 8888899999999 69999999999999988888877766555544
No 88
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.07 E-value=0.047 Score=66.84 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=82.1
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEE---ecC-CcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG---GKA-FATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~---GKa-~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
..++.-|-|+..-|+... .|...+++++ + +|+.+ ..+++|=. ... -|.|. ++-+.|.++..+||..
T Consensus 363 ~kiIlgVDRLD~~KGI~~-kL~AfE~fL~--~-~Pe~r---~kVVLvQIa~psr~~v~eY~---~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQ-KILAFEKFLE--E-NPEWR---DKVVLLQIAVPTRTDVPEYQ---KLTSQVHEIVGRINGR 432 (934)
T ss_pred ceEEEEeeccccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEcCCCCCCcHHHH---HHHHHHHHHHHHHhhh
Confidence 458899999999999998 9999999876 2 45543 12333322 211 23443 3446677777777632
Q ss_pred cCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhHHhhc-----CceEeeecCch
Q 005595 489 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGA 550 (689)
Q Consensus 489 p~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~N-----G~l~lstlDG~ 550 (689)
=...+-.-|.++.. +..+---.+|.+|||++.+|. .|--++--+-+|.- |+|.||=.-|+
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGa 498 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGA 498 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCch
Confidence 22222223666554 344444568999999999999 77777777776654 88888755555
No 89
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0013 Score=72.75 Aligned_cols=176 Identities=14% Similarity=0.168 Sum_probs=108.7
Q ss_pred CcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHHHH
Q 005595 182 KVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFI 261 (689)
Q Consensus 182 ~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~~ 261 (689)
..|-|.|||+++.++ -+.|.. .....++||||-- ++. |++ +.=|-.|-
T Consensus 175 ~vVahFHEW~AGVgL-~l~R~r-------------rl~iaTifTTHAT-----------LLG----RyL---CA~~~DfY 222 (692)
T KOG3742|consen 175 AVVAHFHEWQAGVGL-ILCRAR-------------RLDIATIFTTHAT-----------LLG----RYL---CAGNVDFY 222 (692)
T ss_pred HHHHHHHHHHhccch-heehhc-------------ccceEEEeehhHH-----------HHH----HHH---hcccchhh
Confidence 567899999999984 455542 1446799999932 222 222 11111111
Q ss_pred HHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCcccc-ccCCcc
Q 005595 262 AMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKT-NGITPR 340 (689)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~It-NGV~~~ 340 (689)
..+. .+.+|.+.= +.+| +.+..|-..|...+|-.+|||++-+-+... +...|-..|| ||....
T Consensus 223 NnLd-~f~vD~EAG-kr~I------YHrYC~ERaa~h~AhVFTTVSeITa~EAeH--------lLkRKPD~itPNGLNV~ 286 (692)
T KOG3742|consen 223 NNLD-SFDVDKEAG-KRQI------YHRYCLERAAAHTAHVFTTVSEITALEAEH--------LLKRKPDVITPNGLNVK 286 (692)
T ss_pred hchh-hcccchhhc-cchh------HHHHHHHHHhhhhhhhhhhHHHHHHHHHHH--------HHhcCCCeeCCCCccee
Confidence 1111 223322100 0011 125789999999999999999987755542 2222334443 787765
Q ss_pred cccccCChhhhHHHHHhcCccccccchhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcCC-CCCeeEe
Q 005595 341 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDI 417 (689)
Q Consensus 341 ~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g--~~~~-p~~l~~~ 417 (689)
.+.+ + .+++..|..+|.++.+|||-++- ++.| ...++.-
T Consensus 287 KFsA-----~---------------------------------HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfF 328 (692)
T KOG3742|consen 287 KFSA-----V---------------------------------HEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFF 328 (692)
T ss_pred ehhH-----H---------------------------------HHHHHHHHHHHHHHHHHhhhhccccccccccceEEEE
Confidence 5511 1 12567889999999999998874 2333 3456666
Q ss_pred ecccc-hhhhhhhhhhhhHHHHHHHHhh
Q 005595 418 QVKRI-HEYKRQLLNILGAIYRYKKLKE 444 (689)
Q Consensus 418 ~vrR~-~eyKR~~Lnil~~i~rl~~i~~ 444 (689)
.+.|. -.-|++|+ .+..+.||..++.
T Consensus 329 iAGRYEf~NKGaDm-FiEsLaRLN~~Lk 355 (692)
T KOG3742|consen 329 IAGRYEFSNKGADM-FIESLARLNYLLK 355 (692)
T ss_pred EeeeeeeccCchHH-HHHHHHHhHHHHe
Confidence 67776 46799999 9999999997765
No 90
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=96.35 E-value=0.35 Score=52.63 Aligned_cols=111 Identities=13% Similarity=-0.029 Sum_probs=66.3
Q ss_pred CeeEeecccc-hhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 005595 413 SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 491 (689)
Q Consensus 413 ~l~~~~vrR~-~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~ 491 (689)
..+.+...|. ...|+... ++..+.++.+- . .++++||.|-+.| ...+. + .+... .
T Consensus 198 ~~vl~~~hr~~~~~k~~~~-ll~a~~~l~~~---~-------~~~~~vi~~~~~~--~~~~~----~---~~~~~----~ 253 (365)
T TIGR00236 198 RYILLTLHRRENVGEPLEN-IFKAIREIVEE---F-------EDVQIVYPVHLNP--VVREP----L---HKHLG----D 253 (365)
T ss_pred CEEEEecCchhhhhhHHHH-HHHHHHHHHHH---C-------CCCEEEEECCCCh--HHHHH----H---HHHhC----C
Confidence 3455556554 33466666 77777766431 1 1467888763333 21111 1 12111 1
Q ss_pred CCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecC-chhHHHHH
Q 005595 492 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQ 556 (689)
Q Consensus 492 ~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlD-G~~vEi~~ 556 (689)
.+ +|.|+...+..---.+++.||+.+-+| |+..+-||.-|.+.|++.+ |.+.|+++
T Consensus 254 ~~--~v~~~~~~~~~~~~~~l~~ad~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~ 310 (365)
T TIGR00236 254 SK--RVHLIEPLEYLDFLNLAANSHLILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETVE 310 (365)
T ss_pred CC--CEEEECCCChHHHHHHHHhCCEEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHHh
Confidence 33 688888655544457789999987554 6678999999999998754 54555554
No 91
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.00 E-value=0.059 Score=59.05 Aligned_cols=161 Identities=10% Similarity=0.031 Sum_probs=96.5
Q ss_pred chhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccccccCChhhhHHHHHhcCccccccchhhH
Q 005595 291 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 370 (689)
Q Consensus 291 nm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~Wl~~~nP~l~~li~~~~~~~~W~~~~~~l 370 (689)
.+....+..|+.|-++|+.-.+.++. + ..++..|.|||+...+ .|.-.
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~-----~----~~~i~~i~ngvd~~~f----~~~~~------------------- 192 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR-----L----NPNVVLVPNGVDYEHF----AAARD------------------- 192 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh-----C----CCCEEEcccccCHHHh----hcccc-------------------
Confidence 44556677899999999976655542 1 1467778999998766 22100
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCcccc
Q 005595 371 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 450 (689)
Q Consensus 371 ~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~ 450 (689)
... .. +.+ . ..+.+.++++.++.+.+..+| +..+.+. .
T Consensus 193 ------~~~--------~~-----~~~-------~----~~~~~~i~y~G~l~~~~d~~l-----l~~la~~---~---- 230 (373)
T cd04950 193 ------PPP--------PP-----ADL-------A----ALPRPVIGYYGAIAEWLDLEL-----LEALAKA---R---- 230 (373)
T ss_pred ------cCC--------Ch-----hHH-------h----cCCCCEEEEEeccccccCHHH-----HHHHHHH---C----
Confidence 000 00 001 0 134578999999998443333 2333321 1
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCC
Q 005595 451 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 530 (689)
Q Consensus 451 ~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasG 530 (689)
...+|+|.|.+++..... .+. .. . +|.|+.--.-+-....++++|+.++|++..--..+
T Consensus 231 ---p~~~~vliG~~~~~~~~~--------~~~-------~~-~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~ 289 (373)
T cd04950 231 ---PDWSFVLIGPVDVSIDPS--------ALL-------RL-P--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRA 289 (373)
T ss_pred ---CCCEEEEECCCcCccChh--------Hhc-------cC-C--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhc
Confidence 147999999884332221 111 11 2 58888765555667788999999999874321233
Q ss_pred cch---hHHhhcCceEeee
Q 005595 531 TSN---MKFSLNGCLIIGT 546 (689)
Q Consensus 531 Ts~---Mka~~NG~l~lst 546 (689)
++. +-+|.-|.+.|+|
T Consensus 290 ~~P~Kl~EylA~G~PVVat 308 (373)
T cd04950 290 TSPLKLFEYLAAGKPVVAT 308 (373)
T ss_pred CCcchHHHHhccCCCEEec
Confidence 444 4588999999987
No 92
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=95.78 E-value=0.022 Score=52.38 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=65.0
Q ss_pred CCeeEeecccchhhhhhhhhhhh-HHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 412 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 412 ~~l~~~~vrR~~eyKR~~Lnil~-~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
|.++++.+.+++..|+.+. +++ .+.++.+- . .+++++|.|.+.+ . +.++.
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~~---~-------p~~~l~i~G~~~~--~--------l~~~~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKEK---H-------PDIELIIIGNGPD--E--------LKRLR-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHHH---S-------TTEEEEEECESS---H--------HCCHH--------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHHH---C-------cCEEEEEEeCCHH--H--------HHHhc--------
Confidence 4688999999999999998 888 88777652 1 2589999999555 1 22221
Q ss_pred CCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecC
Q 005595 491 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 548 (689)
Q Consensus 491 ~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlD 548 (689)
.. +|.|.... .++ ..++++||+.+.|++. -|.+++.-+-+|..|.+.|++-.
T Consensus 52 -~~--~v~~~g~~-~e~-~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 52 -RP--NVRFHGFV-EEL-PEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp -HC--TEEEE-S--HHH-HHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH
T ss_pred -CC--CEEEcCCH-HHH-HHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc
Confidence 12 58888887 454 5558889999998862 34677888999999999998754
No 93
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.50 E-value=0.09 Score=60.84 Aligned_cols=177 Identities=12% Similarity=0.112 Sum_probs=112.6
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 490 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~ 490 (689)
+..++-+.|-|+ +-|+.+- ++..+.++.+. +| .+++.|-|.+.+... .+.+-+.|.++....+.+..
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~~---~p-------~~~L~~~gy~~~~~~-~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYILK---NP-------DYELKILTYNNDNDI-TQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHhh---CC-------CeEEEEEEecCchhH-HHHHHHHHHHHHhhhchhhh
Confidence 445555566699 9999998 88888888763 22 479999999965322 22222333333222111110
Q ss_pred C------------------CCcceEEEEcCCCH--HHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCch
Q 005595 491 V------------------NSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 550 (689)
Q Consensus 491 ~------------------~~~lkVvF~enY~~--~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~ 550 (689)
+ ......|.+.+|-- .+. ..+.-+.+.+.+|+ .|.=| ++|-|+--|.+.|- =|.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqIn--yg~ 459 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQIN--KVE 459 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCeee--cCC
Confidence 0 00003677788776 666 77889999999999 88888 89999999998881 111
Q ss_pred hHHHHHHhcCcceeeeccccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCcccccc
Q 005595 551 NVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVG 630 (689)
Q Consensus 551 ~vEi~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~ 630 (689)
-|+++. |.|||+.|+ ..+|.+
T Consensus 460 -~~~V~d--~~NG~li~d---------------------------------------~~~l~~----------------- 480 (519)
T TIGR03713 460 -TDYVEH--NKNGYIIDD---------------------------------------ISELLK----------------- 480 (519)
T ss_pred -ceeeEc--CCCcEEeCC---------------------------------------HHHHHH-----------------
Confidence 111211 345555521 233333
Q ss_pred CChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHH
Q 005595 631 YDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQY 676 (689)
Q Consensus 631 ~Df~sY~~aq~~~~~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY 676 (689)
.+..+..+++.|.++...++..+..||++..+.+-
T Consensus 481 -----------al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW 515 (519)
T TIGR03713 481 -----------ALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERL 515 (519)
T ss_pred -----------HHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 22334478999999999999988899999887653
No 94
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=94.58 E-value=1.2 Score=51.19 Aligned_cols=127 Identities=14% Similarity=0.143 Sum_probs=71.2
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEec-CCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPEV 491 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GK-a~P~y~~aK~iIk~i~~~a~~in~dp~~ 491 (689)
.-+++-|-|+..-|+..+ =|...+++++- +|+.+ ..+++|=.+- +-..-..-.++-+.|.++...||..=.-
T Consensus 276 ~~ii~gvDrld~~kGi~~-kl~Afe~fL~~---~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~ 348 (474)
T PF00982_consen 276 RKIIVGVDRLDYTKGIPE-KLRAFERFLER---YPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGT 348 (474)
T ss_dssp SEEEEEE--B-GGG-HHH-HHHHHHHHHHH----GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-B
T ss_pred cEEEEEeccchhhcCHHH-HHHHHHHHHHh---CcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhccc
Confidence 468899999999999998 99999999873 67664 2455553332 2222333445677788888888753222
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchhH-------HhhcCceEeeecCch
Q 005595 492 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMK-------FSLNGCLIIGTLDGA 550 (689)
Q Consensus 492 ~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mk-------a~~NG~l~lstlDG~ 550 (689)
.+.--|.++.. .+.+--=-++..||+.+-+|.+ .|.+-+- .-..|+|.||..-|+
T Consensus 349 ~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslr----DGmNLva~Eyva~q~~~~GvLiLSefaGa 411 (474)
T PF00982_consen 349 PDWTPIIYIYRSLSFEELLALYRAADVALVTSLR----DGMNLVAKEYVACQDDNPGVLILSEFAGA 411 (474)
T ss_dssp TTB-SEEEE-S---HHHHHHHHHH-SEEEE--SS----BS--HHHHHHHHHS-TS--EEEEETTBGG
T ss_pred CCceeEEEEecCCCHHHHHHHHHhhhhEEecchh----hccCCcceEEEEEecCCCCceEeeccCCH
Confidence 22234788776 4444444579999999999993 3443221 014699999987777
No 95
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=94.31 E-value=0.56 Score=52.16 Aligned_cols=117 Identities=16% Similarity=0.088 Sum_probs=67.2
Q ss_pred CCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh--hhcCCc
Q 005595 412 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE--VVNTDP 489 (689)
Q Consensus 412 ~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~--~in~dp 489 (689)
+.++++++++. .|..++ ++..+.++.+- . ..+.+|++|.+ |. ...++.+++.+..- ..-...
T Consensus 232 ~~~vil~~~~~--~~~~~~-ll~A~~~l~~~---~-------~~~~liivG~g-~~--r~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 232 NRPVWIAASTH--EGEEEL-VLDAHRALLKQ---F-------PNLLLILVPRH-PE--RFKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred CCcEEEEeCCC--chHHHH-HHHHHHHHHHh---C-------CCcEEEEcCCC-hh--hHHHHHHHHHhCCCcEEEccCC
Confidence 45666778764 466666 77777765431 1 24789999964 42 22334444433221 000000
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccCcccccc-cCCCCccCCCcchhHHhhcCceEeeec
Q 005595 490 EVNSYLKVVFVPNYNVSVAELLIPGSELSQH-ISTAGMEASGTSNMKFSLNGCLIIGTL 547 (689)
Q Consensus 490 ~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~-~s~~~~EasGTs~Mka~~NG~l~lstl 547 (689)
..+..-..+++-+.--++ ..++++||+... +|. .|..|++-+-||.-|.+.|++-
T Consensus 296 ~~~~~~~~v~l~~~~~el-~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g~ 351 (425)
T PRK05749 296 EPPSADTDVLLGDTMGEL-GLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISGP 351 (425)
T ss_pred CCCCCCCcEEEEecHHHH-HHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEECC
Confidence 000000133444433344 488899999555 566 5889999999999999999753
No 96
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=94.02 E-value=3.5 Score=47.36 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=81.4
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPEV 491 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~-P~y~~aK~iIk~i~~~a~~in~dp~~ 491 (689)
.-++.-|-|+.--||... =|...+++++ . .|+.+ ..+++|=.+... ..-..-+++-+.|.++..+||..=.-
T Consensus 255 ~~lilgVDRLDytKGi~~-rl~Afe~fL~--~-~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 347778999999999988 8889999876 2 56654 234444332221 11122245567788888888754433
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcch----hHH----hhcCceEeeecCchh
Q 005595 492 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSN----MKF----SLNGCLIIGTLDGAN 551 (689)
Q Consensus 492 ~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~----Mka----~~NG~l~lstlDG~~ 551 (689)
.+-.-|.++.. ++-+.---++.+|||.+-+|++ -|.+= .-| -..|+|.||-.-|+-
T Consensus 328 ~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplR----DGMNLVAkEyva~q~~~~~GvLILSefAGaA 392 (474)
T PRK10117 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR----DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (474)
T ss_pred CCceeEEEecCCCCHHHHHHHHHhccEEEecccc----cccccccchheeeecCCCCccEEEecccchH
Confidence 33344776655 4444434789999999999984 23220 011 235999999888883
No 97
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=92.94 E-value=1.8 Score=47.21 Aligned_cols=44 Identities=11% Similarity=0.085 Sum_probs=32.0
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeec
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 547 (689)
Q Consensus 496 kVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstl 547 (689)
+|.|+ +|-..+ ..++++||++. + ++.|++-+-||..|.+.|++.
T Consensus 257 ~v~~~-g~~~~~-~~l~~~aD~~v--~----~~gg~t~~EA~a~g~PvI~~~ 300 (380)
T PRK13609 257 ALKVF-GYVENI-DELFRVTSCMI--T----KPGGITLSEAAALGVPVILYK 300 (380)
T ss_pred cEEEE-echhhH-HHHHHhccEEE--e----CCCchHHHHHHHhCCCEEECC
Confidence 57776 554344 46779999986 2 456877789999999988753
No 98
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=92.54 E-value=2.9 Score=45.15 Aligned_cols=100 Identities=9% Similarity=-0.040 Sum_probs=60.8
Q ss_pred CCCCeeEeecccchhhhhhh-hhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 410 DPNSLFDIQVKRIHEYKRQL-LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~-Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
.++..++.++.|....|... + +...+.++.+ .|..+++.|.+.. +. +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~-l~~a~~~~~~------------~~~~~~~~G~g~~--~~---~~~~~-~----~--- 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEA-VPEALALLPE------------ALQVIHQTGKGDL--EE---VRAAY-A----A--- 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHhhh------------CcEEEEEcCCCcH--HH---HHHHh-h----c---
Confidence 35667788888888777643 3 3355444321 1456777888752 21 11111 1 1
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecC
Q 005595 489 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 548 (689)
Q Consensus 489 p~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlD 548 (689)
+ ++ +.+.+|- +--..++++||+++..|- +.+-+-||.-|.+.|++-.
T Consensus 234 ---~--~~-v~~~g~~-~~~~~~~~~~d~~i~~~g------~~~~~Ea~~~g~Pvv~~~~ 280 (357)
T PRK00726 234 ---G--IN-AEVVPFI-DDMAAAYAAADLVICRAG------ASTVAELAAAGLPAILVPL 280 (357)
T ss_pred ---C--Cc-EEEeehH-hhHHHHHHhCCEEEECCC------HHHHHHHHHhCCCEEEecC
Confidence 1 14 4455664 334588899999996441 2556799999999998854
No 99
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=91.12 E-value=2.2 Score=47.34 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=59.0
Q ss_pred HHhCCcCCCCCe-eEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEE-EEecCCcCCHHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSL-FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM-IGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 403 ~~~g~~~~p~~l-~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~I-f~GKa~P~y~~aK~iIk~i~~ 480 (689)
+++|+. ++.+ +.+++.|+...|+.+. ++.. +.+ . . .++|++ ++|+....++ .+
T Consensus 194 ~~~~l~--~~~~~ilv~~G~lg~~k~~~~-li~~---~~~--~-~-------~~~~~vvv~G~~~~l~~-------~l-- 248 (391)
T PRK13608 194 IDNNLD--PDKQTILMSAGAFGVSKGFDT-MITD---ILA--K-S-------ANAQVVMICGKSKELKR-------SL-- 248 (391)
T ss_pred HHcCCC--CCCCEEEEECCCcccchhHHH-HHHH---HHh--c-C-------CCceEEEEcCCCHHHHH-------HH--
Confidence 355654 4444 4567899987777665 4443 222 1 0 146774 4565421111 12
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeee
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 546 (689)
Q Consensus 481 ~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lst 546 (689)
.+..+. .+ +|.| .+|-..+ ..++++||++.. +|.|++-.-||..|.+.|.+
T Consensus 249 -~~~~~~----~~--~v~~-~G~~~~~-~~~~~~aDl~I~------k~gg~tl~EA~a~G~PvI~~ 299 (391)
T PRK13608 249 -TAKFKS----NE--NVLI-LGYTKHM-NEWMASSQLMIT------KPGGITISEGLARCIPMIFL 299 (391)
T ss_pred -HHHhcc----CC--CeEE-EeccchH-HHHHHhhhEEEe------CCchHHHHHHHHhCCCEEEC
Confidence 221111 22 4544 4565444 556799999984 34577778999999999976
No 100
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=90.73 E-value=3.8 Score=45.11 Aligned_cols=111 Identities=9% Similarity=-0.068 Sum_probs=66.4
Q ss_pred HHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeE-EEEEecCCcCCHHHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDV 481 (689)
Q Consensus 403 ~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q-~If~GKa~P~y~~aK~iIk~i~~~ 481 (689)
+++|++ |+.+++.++.|....|+... ++..+........ . ...+.| ++++|+..+..+ .+.+.
T Consensus 198 ~~~gl~--~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~-~-----~~~~~~~~vi~G~~~~~~~-------~L~~~ 261 (382)
T PLN02605 198 RELGMD--EDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN-L-----GKPIGQVVVICGRNKKLQS-------KLESR 261 (382)
T ss_pred HHcCCC--CCCcEEEEECCCcccccHHH-HHHHHHHhhcccc-c-----cCCCceEEEEECCCHHHHH-------HHHhh
Confidence 466754 77899999999999998766 6555543321000 0 012355 678887632111 22222
Q ss_pred HhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeec
Q 005595 482 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 547 (689)
Q Consensus 482 a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstl 547 (689)
+. .. +|.| .+|-..+. .++++||+++..| .|++-+-||.-|.+.|+|-
T Consensus 262 ~~--------~~--~v~~-~G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~ 309 (382)
T PLN02605 262 DW--------KI--PVKV-RGFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILNG 309 (382)
T ss_pred cc--------cC--CeEE-EeccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEec
Confidence 21 22 3433 34433454 5679999999643 3667799999999999873
No 101
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.69 E-value=14 Score=45.75 Aligned_cols=132 Identities=12% Similarity=0.093 Sum_probs=83.0
Q ss_pred CCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC---HHHHHHHHHHHHHHhhhcC
Q 005595 411 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY---TNAKRIVKLVNDVGEVVNT 487 (689)
Q Consensus 411 p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y---~~aK~iIk~i~~~a~~in~ 487 (689)
++..++.-|-|+.--||..+ =|...+++++ + +|+.+ ..+++|=. +-|.- ..-+++-+.|.++..+||.
T Consensus 337 ~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~--~-~P~~~---gkvvlvQi--a~psr~~~~~y~~~~~ev~~~v~rIN~ 407 (854)
T PLN02205 337 QDRIMLLGVDDMDIFKGISL-KLLAMEQLLM--Q-HPEWQ---GKVVLVQI--ANPARGKGKDVKEVQAETHSTVKRINE 407 (854)
T ss_pred CCCEEEEEccCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEE--ecCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 34568889999999999999 8888899876 3 56654 23444432 22322 2223455677788888875
Q ss_pred CcCCCCcceEEEEcC-CCHHHHHhhccCcccccccCCCC------ccC--CCcc--hhH-------H-hhcCceEeeecC
Q 005595 488 DPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAG------MEA--SGTS--NMK-------F-SLNGCLIIGTLD 548 (689)
Q Consensus 488 dp~~~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~------~Ea--sGTs--~Mk-------a-~~NG~l~lstlD 548 (689)
.=.-.+.--|+++.. +..+----+|..||+.+-+|+|- +|- |-.+ ++. . -..|+|.||-.-
T Consensus 408 ~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfa 487 (854)
T PLN02205 408 TFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFI 487 (854)
T ss_pred hcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeecc
Confidence 433334345777754 45444445799999999999852 232 2211 111 0 146899999877
Q ss_pred chh
Q 005595 549 GAN 551 (689)
Q Consensus 549 G~~ 551 (689)
|+-
T Consensus 488 Gaa 490 (854)
T PLN02205 488 GCS 490 (854)
T ss_pred chh
Confidence 773
No 102
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=89.14 E-value=5.8 Score=42.24 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=57.2
Q ss_pred CCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEE-EEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 005595 410 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI-MIGGKAFATYTNAKRIVKLVNDVGEVVNTD 488 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~-If~GKa~P~y~~aK~iIk~i~~~a~~in~d 488 (689)
+++.++++++.|....|...-.+...+.++.+ .++++ +++|.+.. + .+.+..+..
T Consensus 176 ~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~------------~~~~~~~~~g~~~~--~-------~l~~~~~~~--- 231 (348)
T TIGR01133 176 REGKPTILVLGGSQGAKILNELVPKALAKLAE------------KGIQIVHQTGKNDL--E-------KVKNVYQEL--- 231 (348)
T ss_pred CCCCeEEEEECCchhHHHHHHHHHHHHHHHhh------------cCcEEEEECCcchH--H-------HHHHHHhhC---
Confidence 36677888888877777754214444444422 12344 45554422 1 122222211
Q ss_pred cCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCC-cchhHHhhcCceEeeecC
Q 005595 489 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLD 548 (689)
Q Consensus 489 p~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasG-Ts~Mka~~NG~l~lstlD 548 (689)
.+.+ +|.|. +. .+ ..++++||+++.. || ++-+-||..|.+.|+|..
T Consensus 232 -~l~~--~v~~~--~~-~~-~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 232 -GIEA--IVTFI--DE-NM-AAAYAAADLVISR-------AGASTVAELAAAGVPAILIPY 278 (348)
T ss_pred -CceE--EecCc--cc-CH-HHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeC
Confidence 1222 33344 32 23 5789999999963 35 456699999999998854
No 103
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=88.91 E-value=25 Score=40.68 Aligned_cols=128 Identities=15% Similarity=0.109 Sum_probs=82.2
Q ss_pred CeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEe-cCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 005595 413 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFATYTNAKRIVKLVNDVGEVVNTDPEV 491 (689)
Q Consensus 413 ~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~G-Ka~P~y~~aK~iIk~i~~~a~~in~dp~~ 491 (689)
.-++.-+-|+.--||..- =|...+||++ + +|+.+. .+.+|=.+ ...+.-+.-+.+-+.|..+..+||..=.-
T Consensus 282 ~kiivgvDRlDy~kGi~~-rl~Afe~lL~--~-~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~ 354 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQ-RLLAFERLLE--E-YPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354 (486)
T ss_pred ceEEEEehhcccccCcHH-HHHHHHHHHH--h-ChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 346777889999999876 7788888875 3 566542 34444333 33333333366778888888888753322
Q ss_pred CCcceEEEEcC-CCHHHHHhhccCcccccccCCCCccCCCcchh----HH---hhcCceEeeecCchh
Q 005595 492 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNM----KF---SLNGCLIIGTLDGAN 551 (689)
Q Consensus 492 ~~~lkVvF~en-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~M----ka---~~NG~l~lstlDG~~ 551 (689)
.+..-|.|+.- .+-..--.++..+|+.+-+|++ .|.+-+ -| ..+|+|.+|-.-|+-
T Consensus 355 ~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplr----DGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLR----DGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred CCcceeEEEeccCCHHHHHHHHhhhceeeecccc----ccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 22234556543 4444555588999999999994 354432 12 236999999877774
No 104
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=88.36 E-value=0.53 Score=43.25 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=44.4
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchHHHHHHhchhHHHHHHHHHHH
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+||+||+|.++++++ ..++|.. .+..+++|.|+........|...++.
T Consensus 72 ~~~Dvv~~~~~~~~~~-~~~~~~~--------------~~~p~v~~~h~~~~~~~~~~~~~~~~---------------- 120 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLV-AALARRR--------------RGIPLVVTVHGTLFRRGSRWKRRLYR---------------- 120 (160)
T ss_dssp ---SEEEEEHHHHHHH-HHHHHHH--------------HT--EEEE-SS-T------HHHHHHH----------------
T ss_pred cCCeEEEecccchhHH-HHHHHHc--------------cCCcEEEEECCCchhhccchhhHHHH----------------
Confidence 4889999999887665 4555522 34679999997443221111111110
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCccchhchhhhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCcccccc
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNG 336 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~vnm~~lai~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNG 336 (689)
.+....+..|+.+-++|+--.+.+.+ + ++-++++.-|-||
T Consensus 121 -------------------------------~~~~~~~~~ad~vi~~S~~~~~~l~~--~----g~~~~ri~vipnG 160 (160)
T PF13579_consen 121 -------------------------------WLERRLLRRADRVIVVSEAMRRYLRR--Y----GVPPDRIHVIPNG 160 (160)
T ss_dssp -------------------------------HHHHHHHHH-SEEEESSHHHHHHHHH--H-------GGGEEE----
T ss_pred -------------------------------HHHHHHHhcCCEEEECCHHHHHHHHH--h----CCCCCcEEEeCcC
Confidence 12234566789999999988877764 2 3345678888787
No 105
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=85.33 E-value=17 Score=38.70 Aligned_cols=102 Identities=10% Similarity=0.016 Sum_probs=57.0
Q ss_pred CCCCeeEeecccchhhhhh-hhhhhhHHHHHHHHhhcCccccCCCCCeE-EEEEecCCcCCHHHHHHHHHHHHHHhhhcC
Q 005595 410 DPNSLFDIQVKRIHEYKRQ-LLNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDVGEVVNT 487 (689)
Q Consensus 410 ~p~~l~~~~vrR~~eyKR~-~Lnil~~i~rl~~i~~~~~~~~~~~~p~q-~If~GKa~P~y~~aK~iIk~i~~~a~~in~ 487 (689)
+++..++..+.|...+|.. ++ +...+..+.+ .+.+ +++.|.+. .+. +.+.+.++
T Consensus 178 ~~~~~~i~~~~g~~~~~~~~~~-l~~a~~~l~~------------~~~~~~~i~G~g~--~~~---l~~~~~~~------ 233 (350)
T cd03785 178 RPGKPTLLVFGGSQGARAINEA-VPEALAELLR------------KRLQVIHQTGKGD--LEE---VKKAYEEL------ 233 (350)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHhhc------------cCeEEEEEcCCcc--HHH---HHHHHhcc------
Confidence 4566777777666667654 34 4344444321 1344 45677761 121 22222111
Q ss_pred CcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCc
Q 005595 488 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 549 (689)
Q Consensus 488 dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG 549 (689)
.+ +|.|.. |- +-...++++||+++..|- |++-+-||..|.+.|++-.+
T Consensus 234 ----~~--~v~~~g-~~-~~~~~~l~~ad~~v~~sg------~~t~~Eam~~G~Pvv~~~~~ 281 (350)
T cd03785 234 ----GV--NYEVFP-FI-DDMAAAYAAADLVISRAG------ASTVAELAALGLPAILIPLP 281 (350)
T ss_pred ----CC--CeEEee-hh-hhHHHHHHhcCEEEECCC------HhHHHHHHHhCCCEEEeecC
Confidence 23 455544 43 334467799999995431 35567999999999987543
No 106
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=80.65 E-value=4.2 Score=35.12 Aligned_cols=35 Identities=3% Similarity=0.075 Sum_probs=26.8
Q ss_pred HHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005595 643 VDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 677 (689)
Q Consensus 643 ~~~~Y~~~~~W~~~~~~~ma~~-g~FS~drti~eY~ 677 (689)
+..+.+|++.+.++..++-... ..|+|+..+++..
T Consensus 56 i~~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 56 IEYLLENPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3344578999999998886665 3899999998864
No 107
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=79.82 E-value=8.2 Score=41.93 Aligned_cols=108 Identities=13% Similarity=0.105 Sum_probs=63.7
Q ss_pred HHhCCcCCCCCeeE-e-ecccchhhhhh-hhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFD-I-QVKRIHEYKRQ-LLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 479 (689)
Q Consensus 403 ~~~g~~~~p~~l~~-~-~vrR~~eyKR~-~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~ 479 (689)
+++|+. ++.+++ + --+|..+.|+. .. ++..+..+.+- . ..+++|++|- +|.+.. .+.
T Consensus 178 ~~l~~~--~~~~~il~~~gsr~~~~~~~~~~-l~~a~~~l~~~---~-------~~~~~ii~~~-~~~~~~------~~~ 237 (380)
T PRK00025 178 ARLGLD--PDARVLALLPGSRGQEIKRLLPP-FLKAAQLLQQR---Y-------PDLRFVLPLV-NPKRRE------QIE 237 (380)
T ss_pred HHcCCC--CCCCEEEEECCCCHHHHHHHHHH-HHHHHHHHHHh---C-------CCeEEEEecC-ChhhHH------HHH
Confidence 356654 444432 3 34688888774 34 66666665431 1 1478888764 343332 122
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecC
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 548 (689)
Q Consensus 480 ~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlD 548 (689)
+..+. ..+ +++.+..+ + ...++++||+.+.+ ||++.+-+|..|.+.|.+..
T Consensus 238 ~~~~~------~~~-~~v~~~~~---~-~~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 238 EALAE------YAG-LEVTLLDG---Q-KREAMAAADAALAA-------SGTVTLELALLKVPMVVGYK 288 (380)
T ss_pred HHHhh------cCC-CCeEEEcc---c-HHHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEEc
Confidence 22221 001 23444443 2 35678999999984 59999999999999997644
No 108
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=79.35 E-value=13 Score=41.30 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=68.8
Q ss_pred HHhCCcCCCCCeeEee--cccchh-hhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFDIQ--VKRIHE-YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 479 (689)
Q Consensus 403 ~~~g~~~~p~~l~~~~--vrR~~e-yKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~ 479 (689)
+++|+. ++.+++++ .+|.++ -|.... ++..+.++.+- . ...++++.+-..+.... +.
T Consensus 183 ~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~~---~-------p~~~~vi~~~~~~~~~~-------~~ 242 (385)
T TIGR00215 183 EKLGID--HNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQQ---E-------PDLRRVLPVVNFKRRLQ-------FE 242 (385)
T ss_pred HHcCCC--CCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHHh---C-------CCeEEEEEeCCchhHHH-------HH
Confidence 356654 55555543 479998 455555 66666666441 1 13567665543332222 22
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 480 ~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
++.+.+. ... +|.++.+ ++ +.++++||+.+-+| ||+-+-+|..|.+.|.+.---++.
T Consensus 243 ~~~~~~~----~~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl~ 299 (385)
T TIGR00215 243 QIKAEYG----PDL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPLT 299 (385)
T ss_pred HHHHHhC----CCC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHHH
Confidence 2222221 122 6766654 33 35889999999777 999999999999999876555543
No 109
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=77.56 E-value=13 Score=39.80 Aligned_cols=110 Identities=15% Similarity=0.210 Sum_probs=62.3
Q ss_pred HhCCcCCCCCeeEeecccchh---hhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 005595 404 VTGVTIDPNSLFDIQVKRIHE---YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 404 ~~g~~~~p~~l~~~~vrR~~e---yKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~ 480 (689)
..|+. ++..+.++..|... .|+... ++..+.++.. ..+++|+.| ++.... . +.+
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l~~------------~~~~vi~~~--~~~~~~--~----l~~ 248 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEE-ILEALAELAE------------EDVPVVFPN--HPRTRP--R----IRE 248 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHH-HHHHHHHHHh------------cCCEEEEEC--CCChHH--H----HHH
Confidence 44543 45566777888765 788877 7777765522 025666654 333222 1 222
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecC
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 548 (689)
Q Consensus 481 ~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlD 548 (689)
..+.... ..+ +|.|+.--...--..++++||+++.+|- |+ ..-||..|.+.|.+-+
T Consensus 249 ~~~~~~~---~~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~~ 304 (363)
T cd03786 249 AGLEFLG---HHP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLRD 304 (363)
T ss_pred HHHhhcc---CCC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeCC
Confidence 2222110 023 5666642122234556899999998763 44 6778888898887754
No 110
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=76.88 E-value=3.9 Score=38.13 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=25.0
Q ss_pred hhcCCceeeehhhhHHHHHhhhhcChhhhcCCCCccccccCCcccc
Q 005595 297 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRW 342 (689)
Q Consensus 297 i~~S~~vNgVS~lh~ev~~~~~f~~~~~l~p~k~~~ItNGV~~~~W 342 (689)
...++.+-+||.--++.+.+ + ++-+.++.=|.|||+..+.
T Consensus 137 ~~~~~~ii~vS~~~~~~l~~--~----~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 137 YKKADRIIAVSESTKDELIK--F----GIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HCCSSEEEESSHHHHHHHHH--H----T--SS-EEE----B-CCCH
T ss_pred HhcCCEEEEECHHHHHHHHH--h----CCcccCCEEEECCccHHHc
Confidence 56799999999988877764 3 3446889999999998653
No 111
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=49.13 E-value=3.1e+02 Score=31.81 Aligned_cols=114 Identities=13% Similarity=0.140 Sum_probs=51.3
Q ss_pred HHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCe-EEEEEecCCcCCHHHHHHHHHHHHH
Q 005595 403 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMIGGKAFATYTNAKRIVKLVNDV 481 (689)
Q Consensus 403 ~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~-q~If~GKa~P~y~~aK~iIk~i~~~ 481 (689)
..+|++ .+.++.+-.-++.-.-.. .+....++++- .|- .+++.. .|.... .. +.+.
T Consensus 277 ~~~gLp--~d~vvF~~fn~~~KI~p~---~l~~W~~IL~~-----------vP~S~L~L~~--~~~~~~-~~----l~~~ 333 (468)
T PF13844_consen 277 AQYGLP--EDAVVFGSFNNLFKISPE---TLDLWARILKA-----------VPNSRLWLLR--FPASGE-AR----LRRR 333 (468)
T ss_dssp GGGT----SSSEEEEE-S-GGG--HH---HHHHHHHHHHH-----------STTEEEEEEE--TSTTHH-HH----HHHH
T ss_pred HHcCCC--CCceEEEecCccccCCHH---HHHHHHHHHHh-----------CCCcEEEEee--CCHHHH-HH----HHHH
Confidence 345655 667777776666544433 44445555431 233 344433 333222 22 2222
Q ss_pred HhhhcCCcCCCCcceEEEEcCC--CHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCch
Q 005595 482 GEVVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 550 (689)
Q Consensus 482 a~~in~dp~~~~~lkVvF~enY--~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~ 550 (689)
.+... --++ ||+|.+-= ...+ ..+.-+||.|-++- + ..||+.|-|+--|+ |+.|+-|-
T Consensus 334 ~~~~G---v~~~--Ri~f~~~~~~~ehl--~~~~~~DI~LDT~p--~-nG~TTt~dALwmGV-PvVTl~G~ 393 (468)
T PF13844_consen 334 FAAHG---VDPD--RIIFSPVAPREEHL--RRYQLADICLDTFP--Y-NGGTTTLDALWMGV-PVVTLPGE 393 (468)
T ss_dssp HHHTT---S-GG--GEEEEE---HHHHH--HHGGG-SEEE--SS--S---SHHHHHHHHHT---EEB---S
T ss_pred HHHcC---CChh--hEEEcCCCCHHHHH--HHhhhCCEEeeCCC--C-CCcHHHHHHHHcCC-CEEeccCC
Confidence 22211 1135 78887632 2222 25688999999854 5 45799999998888 55565544
No 112
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=47.23 E-value=26 Score=32.10 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=24.4
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcC-ccEEEeecCC
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT-RTVAYTNHTV 229 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~-~~~vfT~HT~ 229 (689)
.+||+||+|...|...+.-+++.+ .+ ..+++|.|..
T Consensus 73 ~~~DvIh~h~~~~~~~~~~l~~~~--------------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 73 EKPDVIHCHTPSPYGLFAMLAKKL--------------LKNKKVIYTVHGS 109 (139)
T ss_pred CCCCEEEEecCChHHHHHHHHHHH--------------cCCCCEEEEecCC
Confidence 479999999999843323444322 33 6799999964
No 113
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=45.31 E-value=5.4e+02 Score=29.77 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHhCCcCCCCCeeEeecccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHH
Q 005595 391 MASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN 470 (689)
Q Consensus 391 ~~~K~~L~~~i~~~~g~~~~p~~l~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~ 470 (689)
...++.+++++.+++++..... .|..|+....+.+...- -..|+++.+.||=.+--..
T Consensus 256 lL~~q~~~e~l~~~L~L~~~~~-------------~~~~l~~W~~~~~~~d~---------~~~~V~IalVGKYt~l~Ds 313 (585)
T KOG2387|consen 256 LLEEQGIVEYLNRRLGLSIISS-------------ERPMLDKWSNMAERYDD---------LQVPVRIALVGKYTKLSDS 313 (585)
T ss_pred HHhhhhHHHHHHHHhCCCcccc-------------chhhHHHHHHHHHhhhc---------ccCcEEEEEEeccccchHH
Confidence 3455668888988988763321 22455444444443321 1248999999998887776
Q ss_pred HHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCH------------HHHHhhccCcccccccCCCCccCCCcchhHHh-
Q 005595 471 AKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNV------------SVAELLIPGSELSQHISTAGMEASGTSNMKFS- 537 (689)
Q Consensus 471 aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~------------~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~- 537 (689)
--.++|.+..-|-.+ +.||.+.+++.=+. .-|=.++.+||=.|-|-- |-.-|++||..+
T Consensus 314 Y~Sv~KAL~Ha~~~~------~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGG--FG~RGveG~i~Aa 385 (585)
T KOG2387|consen 314 YLSVVKALEHAALAI------NRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGG--FGDRGVEGKILAA 385 (585)
T ss_pred HHHHHHHHHHHHHHh------cccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCc--ccccchhHHHHHH
Confidence 677888887777654 66788999876443 346678889999999976 999999999755
Q ss_pred ----hcCceEeeecCc---hhHHHHHHhcC
Q 005595 538 ----LNGCLIIGTLDG---ANVEIRQEIGE 560 (689)
Q Consensus 538 ----~NG~l~lstlDG---~~vEi~~~~Gg 560 (689)
-|+.+-+|+.=| +-||++|.+=|
T Consensus 386 k~ARen~iP~LGiCLGmQ~AvIEfaRnvLg 415 (585)
T KOG2387|consen 386 KWARENKIPFLGICLGMQLAVIEFARNVLG 415 (585)
T ss_pred HHHHhcCCCeEeeehhhhHHHHHHHHHhhC
Confidence 489999998777 46899998744
No 114
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=44.69 E-value=57 Score=37.25 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=45.2
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEee
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIG 545 (689)
Q Consensus 496 kVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~ls 545 (689)
.|+..++|.......++.-||++|.+|. .|.=|.+-|.|+-+|.+.+|
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~a 376 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLILG 376 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEEE
Confidence 5999999999777899999999999999 99999999999999998886
No 115
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=43.60 E-value=43 Score=32.11 Aligned_cols=46 Identities=17% Similarity=0.047 Sum_probs=34.0
Q ss_pred CCCcEEEeCCcchhchHHHHHHHHHHhcCCChHHHhhhcCccEEEeecCChhhhhhhchH
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 239 (689)
Q Consensus 180 ~~~~viHlND~H~al~~~ellR~l~d~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~ 239 (689)
.+||+||+|++.++.+.+ ++.. ...+..+++|.|++.+.-...+..
T Consensus 50 ~~~D~i~~~~~~~~~~~~-~~~~-------------~~~~~~~i~~~h~~~~~~~~~~~~ 95 (229)
T cd01635 50 FKPDVVHAHGYYPAPLAL-LLAA-------------RLLGIPLVLTVHGVNRSLLEGVPL 95 (229)
T ss_pred cCCCEEEEcCCCcHHHHH-HHHH-------------hhCCCCEEEEEcCccHhhcccCcH
Confidence 488999999999998754 1111 125678999999999987755544
No 116
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=42.71 E-value=4.4e+02 Score=29.71 Aligned_cols=84 Identities=20% Similarity=0.223 Sum_probs=61.9
Q ss_pred CCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcc
Q 005595 453 TTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS 532 (689)
Q Consensus 453 ~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs 532 (689)
..|+-++++|.---...+ +-+|.+.++|..+ .+++ +|.|.-|---+--..++.-|-+-++.=- -|-=|.|
T Consensus 303 ~~~iKL~ivGScRneeD~--ervk~Lkd~a~~L----~i~~--~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIs 372 (465)
T KOG1387|consen 303 VSPIKLIIVGSCRNEEDE--ERVKSLKDLAEEL----KIPK--HVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGIS 372 (465)
T ss_pred cCCceEEEEeccCChhhH--HHHHHHHHHHHhc----CCcc--ceEEEecCCHHHHHHHhccceeehhhhh--hhhcchh
Confidence 358899999876433332 4577888889876 4788 7999888555555556666666666655 6888999
Q ss_pred hhHHhhcCceEeee
Q 005595 533 NMKFSLNGCLIIGT 546 (689)
Q Consensus 533 ~Mka~~NG~l~lst 546 (689)
=.-+|.-|.+||+.
T Consensus 373 VVEyMAAGlIpi~h 386 (465)
T KOG1387|consen 373 VVEYMAAGLIPIVH 386 (465)
T ss_pred HHHHHhcCceEEEe
Confidence 99999999999975
No 117
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=40.33 E-value=86 Score=33.84 Aligned_cols=69 Identities=9% Similarity=0.032 Sum_probs=44.1
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhH-----------HhhcCceEeeecCchhHHHHHHhcCccee
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK-----------FSLNGCLIIGTLDGANVEIRQEIGEENFF 564 (689)
Q Consensus 496 kVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mk-----------a~~NG~l~lstlDG~~vEi~~~~Gg~n~~ 564 (689)
+|.|+.-..-+--..++++ |+.|-.... ...|+-+.+ +|..|.+.|++.+|+.-|++++ +.+||
T Consensus 208 ~V~f~G~~~~eel~~~l~~-~~gLv~~~~--~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~--~~~G~ 282 (333)
T PRK09814 208 NISYKGWFDPEELPNELSK-GFGLVWDGD--TNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE--NGLGF 282 (333)
T ss_pred CeEEecCCCHHHHHHHHhc-CcCeEEcCC--CCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh--CCceE
Confidence 6888766654444444444 655532221 112222222 4999999999999999999988 47899
Q ss_pred eeccc
Q 005595 565 LFGAV 569 (689)
Q Consensus 565 ~fG~~ 569 (689)
++..+
T Consensus 283 ~v~~~ 287 (333)
T PRK09814 283 VVDSL 287 (333)
T ss_pred EeCCH
Confidence 98744
No 118
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=32.16 E-value=4.4e+02 Score=29.08 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=46.2
Q ss_pred eEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceeeeccccccch
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVP 574 (689)
Q Consensus 496 kVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vEi~~~~Gg~n~~~fG~~~d~v~ 574 (689)
+|.+++.-+-.---.++..||+.+-.|. +|. --|+.-|++.|+. |.+.|+++. |.|....|...+++.
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS-----ggi--~EA~~lg~Pvv~l--~~R~e~~~~--g~nvl~vg~~~~~I~ 330 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS-----SGI--IEAPSFGVPTINI--GTRQKGRLR--ADSVIDVDPDKEEIV 330 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh-----hHH--HhhhhcCCCEEee--cCCchhhhh--cCeEEEeCCCHHHHH
Confidence 5899997777777778899999995554 222 5778889988865 347776655 345554465554443
No 119
>TIGR02672 cas_csm6 CRISPR-associated protein, Csm6 family. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.
Probab=30.37 E-value=25 Score=38.81 Aligned_cols=22 Identities=32% Similarity=0.459 Sum_probs=19.6
Q ss_pred ccCcccccccCCCCccCCCcchhHHhhc
Q 005595 512 IPGSELSQHISTAGMEASGTSNMKFSLN 539 (689)
Q Consensus 512 ~~g~Dv~l~~s~~~~EasGTs~Mka~~N 539 (689)
.+.+++.||.|- ||.|||++|.
T Consensus 41 ~~d~EilLNlSS------GTPQMKSaL~ 62 (362)
T TIGR02672 41 YPDREIILNTSS------GTPQMQSALV 62 (362)
T ss_pred CCCCeEEEECCC------CcHHHHHHHH
Confidence 599999999986 9999999873
No 120
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=30.36 E-value=66 Score=29.53 Aligned_cols=37 Identities=32% Similarity=0.372 Sum_probs=25.5
Q ss_pred CCCcEEEeCCcc---hhchHHHHHHHHHHhcCCChHHHhhhcCc
Q 005595 180 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 220 (689)
Q Consensus 180 ~~~~viHlND~H---~al~~~ellR~l~d~~~l~~~~a~~~~~~ 220 (689)
.+|.+|||..|. +++++..+|+ ..+++.++|++.++.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l~~----~~~~~~~~a~~~vr~ 120 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYLMK----TLGLSLREAYEFVKS 120 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHHHH----HcCCCHHHHHHHHHH
Confidence 478899999997 2333334443 458899999987653
No 121
>PF09659 Cas_Csm6: CRISPR-associated protein (Cas_Csm6)
Probab=28.29 E-value=27 Score=39.19 Aligned_cols=22 Identities=36% Similarity=0.528 Sum_probs=19.4
Q ss_pred ccCcccccccCCCCccCCCcchhHHhhc
Q 005595 512 IPGSELSQHISTAGMEASGTSNMKFSLN 539 (689)
Q Consensus 512 ~~g~Dv~l~~s~~~~EasGTs~Mka~~N 539 (689)
.|.+++.||.|- ||.|||++|-
T Consensus 38 ~~d~eilLNlSS------GTPqmks~L~ 59 (382)
T PF09659_consen 38 YPDDEILLNLSS------GTPQMKSALF 59 (382)
T ss_pred CCCCeEEEeCCC------CHHHHHHHHH
Confidence 399999999996 9999999863
No 122
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=27.72 E-value=75 Score=29.09 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=26.4
Q ss_pred CCcEEEeCCcc---hhchHHHHHHHHHHhcCCChHHHhhhcC
Q 005595 181 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITT 219 (689)
Q Consensus 181 ~~~viHlND~H---~al~~~ellR~l~d~~~l~~~~a~~~~~ 219 (689)
.+..|||.-|. +++++..|| ...+++.++|++.++
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ayLm----~~~~~~~~~A~~~v~ 111 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAYLM----KKNGMSLEEAIEYVR 111 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHH----HHHTSSHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHHHH----HHcCCCHHHHHHHHH
Confidence 56789999998 666655554 457889999998765
No 123
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=27.03 E-value=2.8e+02 Score=31.15 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=71.7
Q ss_pred CCCCCeeEeec--ccchhhhhhhhhhhhHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhc
Q 005595 409 IDPNSLFDIQV--KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 486 (689)
Q Consensus 409 ~~p~~l~~~~v--rR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~i~~~a~~in 486 (689)
++++.++++.. +|-.|=||..--++..+.++.+- . ..++|++.. +.+.+. +. +..+....
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---~-------p~l~fvvp~-a~~~~~---~~---i~~~~~~~- 241 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---R-------PDLQFVVPV-APEVHE---EL---IEEILAEY- 241 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---C-------CCeEEEEec-CCHHHH---HH---HHHHHHhh-
Confidence 56777777776 99999999854266777776652 1 257888774 332222 22 22222221
Q ss_pred CCcCCCCcceEEEEcCCCHHHHHhhccCcccccccCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 005595 487 TDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 553 (689)
Q Consensus 487 ~dp~~~~~lkVvF~enY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~lstlDG~~vE 553 (689)
...+.++++++- ...++.+||+-+ =+|||..+-+++.|++.|.+.--.++.
T Consensus 242 -----~~~~~~~~~~~~----~~~~m~~ad~al-------~~SGTaTLE~Al~g~P~Vv~Yk~~~lt 292 (373)
T PF02684_consen 242 -----PPDVSIVIIEGE----SYDAMAAADAAL-------AASGTATLEAALLGVPMVVAYKVSPLT 292 (373)
T ss_pred -----CCCCeEEEcCCc----hHHHHHhCcchh-------hcCCHHHHHHHHhCCCEEEEEcCcHHH
Confidence 122356666543 445677888765 479999999999999999987766654
No 124
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=20.56 E-value=2.3e+02 Score=30.42 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=26.5
Q ss_pred HHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005595 645 QAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 680 (689)
Q Consensus 645 ~~Y~~~~~W~~~~~~~ma~~g~FS~drti~eY~~~i 680 (689)
.++.|++...+|..++....-.|+.++.++.+.+.+
T Consensus 320 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 320 ELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 345677766777777766555899999999887654
Done!