Query 005595
Match_columns 689
No_of_seqs 193 out of 1412
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 18:22:33 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005595.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2102-2106//hhsearch_pdb/005595hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 1.0 1 1 1562.8 47.3 676 1-687 177-879 (879)
2 1l5w_A Maltodextrin phosphoryl 1.0 1 1 1496.2 52.5 665 1-685 126-796 (796)
3 2gj4_A Glycogen phosphorylase, 1.0 1 1 1492.4 59.6 674 1-688 136-821 (824)
4 2c4m_A Glycogen phosphorylase; 1.0 1 1 1469.7 53.2 660 1-688 127-793 (796)
5 3vue_A GBSS-I, granule-bound s 1.0 1 1 386.7 21.4 431 93-683 74-511 (536)
6 3nb0_A Glycogen [starch] synth 1.0 1 1 236.0 25.9 366 147-679 158-629 (725)
7 1rzu_A Glycogen synthase 1; gl 1.0 1 1 176.4 17.2 333 180-680 129-472 (485)
8 2qzs_A Glycogen synthase; glyc 1.0 1 1 175.4 18.7 335 180-682 128-475 (485)
9 3s28_A Sucrose synthase 1; gly 1.0 1 1 147.4 17.9 332 180-678 406-764 (816)
10 3fro_A GLGA glycogen synthase; 1.0 1 1 138.9 21.9 329 149-683 99-430 (439)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=1.00 E-value=1 Score=1562.78 Aligned_cols=676 Identities=48% Similarity=0.851 Sum_probs=644.9
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEE--CC-CCCE--EEECCEE
Q ss_conf 98889982598436888740289509916551432014799841013790589885985888--49-9933--4317824
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEV 75 (689)
Q Consensus 1 la~l~~p~~g~gl~Y~~G~F~Q~i~dG~Q~e~~d~Wl~~~~~we~~~~~~~~~v~~~g~v~~--~~-~g~~--~w~~~~~ 75 (689)
|||||+|++||||||+||||+|+|.||||+|.||+|+.+|||||++|++.+++|+|+|+|+. +. +|+. .|++++.
T Consensus 177 ~AtLglP~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~ 256 (879)
T 1ygp_A 177 MATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGER 256 (879)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEE
T ss_pred HHHCCCCEEEEEEEECCCCEEEEEECCEEEEECCCHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEEECCCE
T ss_conf 97479984798723437863788238836873652210499422257772689850887764354678850147607837
Q ss_pred EEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999742368889864399999995348876544446961235667543310143231147898300003121022255
Q 005595 76 VQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFL 155 (689)
Q Consensus 76 v~a~~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~r~It~~LY~~d~~~~gk~lRl~Qe~fl 155 (689)
|+|+|||+|||||+++++|+||||++++++ .|+|..|+.|+|..++++++.+|+||++|||+|++++||+|||+|||||
T Consensus 257 v~av~yD~Pi~Gy~~~~~n~lRLW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl 335 (879)
T 1ygp_A 257 VLAVAYDFPVPGFKTSNVNNLRLWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFW 335 (879)
T ss_dssp EEEEEEEEEEECSSCCCEEEEEEEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCEEEEEEEEECCCC-CCCHHHCCCCCHHHHHHCHHHHHCHHCCCCCCCCCCCCHHHHEEHHHHH
T ss_conf 999982156467677855899988715674-0353212676576765573756044206779999864454520014453
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHH
Q ss_conf 67259999999998046633334899818985996311209999999997509995788430275089750687145663
Q 005595 156 CSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALE 235 (689)
Q Consensus 156 ~~a~lq~iir~~~~~~g~~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e 235 (689)
|+||+|||+|+|++.++ +++.|+++++||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|
T Consensus 336 ~sa~lqdilr~~~~~~~--~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE 413 (879)
T 1ygp_A 336 CAASLHDILRRFKKSKR--PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALE 413 (879)
T ss_dssp HHHHHHHHHHHHHHHTC--CGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSC
T ss_pred HHHHHHHHHHHHHHHCC--CHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCHHHHC
T ss_conf 64689999999998189--8556588519981698088889999999754118999999999987510006768657655
Q ss_pred HCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCCHHCHHHHCCCCEEEEHHHHHHH
Q ss_conf 41199999762467999999999999999974699821001135324799999--2105010112079602412355999
Q 005595 236 KWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDI 313 (689)
Q Consensus 236 ~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~--~vnm~~lai~~S~~vNgVS~~h~ei 313 (689)
+||++||+++||||++||++||.+|+..++..+|.+.+++.+|+++++ +.+ +|||++||+++|++|||||++|+++
T Consensus 414 ~wpv~l~~~lLpr~~~II~ein~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev 491 (879)
T 1ygp_A 414 KWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSEL 491 (879)
T ss_dssp EEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEECC--CCCCCEEEHHHHHHHHCCCEEEEHHHHHHH
T ss_conf 388999998778489999999999999999876998999975122136--887540423899997358024752777888
Q ss_pred HHHHHHCCHHHHCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 874210271111578-87631246785453455790025899974186--510146025763200489978999999999
Q 005595 314 LKADLFADYVSLWPN-KLQNKTNGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAK 390 (689)
Q Consensus 314 ~~~~~~~~~~~l~p~-ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~--~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K 390 (689)
+++.+|++|+.+||. ||.+||||||+|||+.+|||++++++++++|+ ++|.+++++|++|.++++|++|+++|+++|
T Consensus 492 ~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK 571 (879)
T 1ygp_A 492 IKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVK 571 (879)
T ss_dssp HHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 88877687887488875668279918741355419889999998629880554548899999886299699999999999
Q ss_pred HHHHHHHHHHHHHHH-CCCCC-----CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC------CC-CCCCCCCEE
Q ss_conf 999999999999994-99679-----998158655541011011123356799999975019------44-558999959
Q 005595 391 MASKKHLADYIWRVT-GVTID-----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS------PQ-ERKKTTPRT 457 (689)
Q Consensus 391 ~~~K~~L~~~i~~~~-g~~~~-----~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~------~~-~~~~~~p~q 457 (689)
++||++|+++|++++ |+.+| |+++||+|||||||||||+||+|+++++|.+|++ + |+ .+++.+|+|
T Consensus 572 ~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~ 650 (879)
T 1ygp_A 572 LNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKV 650 (879)
T ss_dssp HHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEE
T ss_pred HHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCEE
T ss_conf 999999999999975896715888999722565410214767778898777999999982-7654578753336779818
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99972289589878999999999876642995889923599983889778973235763112368777567882123776
Q 005595 458 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 537 (689)
Q Consensus 458 ~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~ 537 (689)
|||||||||+|.+||.|||+|++++++||+||+++++|||||+|||||++|++|+||||||+|+|+||+|||||||||||
T Consensus 651 ~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfa 730 (879)
T 1ygp_A 651 SIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFV 730 (879)
T ss_dssp EEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 99962688786889999999999998851673118954899928998799987500445654189997223584256899
Q ss_pred HCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC---CHHHHHHH
Q ss_conf 138527661476158999983385266504654310445520268999999257999988841988999---94889998
Q 005595 538 LNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY---DYNPLLDS 614 (689)
Q Consensus 538 ~NG~l~istlDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~---~~~~l~~~ 614 (689)
|||+|+|||+|||||||++++|++|+|+||+++++|.+++.++.+..++.+|.+++++|++.+|.|++. +|++||++
T Consensus 731 lNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~ 810 (879)
T 1ygp_A 731 MNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDS 810 (879)
T ss_dssp TTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHH
T ss_pred HCCCEEEECCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 74870441345356787887086657980688899999987295310378989999999995599899983789999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 7208899988633205993779999999999810988-999999997216899996899999999972565544
Q 005595 615 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK-KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 687 (689)
Q Consensus 615 l~~~~~~~~~D~~~v~~Df~~Y~~~q~~~~~~Y~d~~-~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~~~~~ 687 (689)
|..+ +|+|+|++||++|++||++|...|+|++ +|++|++.|||.+|+|||||||+||+++||+++|++
T Consensus 811 L~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~IW~~~p~~ 879 (879)
T 1ygp_A 811 IKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 879 (879)
T ss_dssp HHHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred HHCC-----CCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 8517-----98478856489999999999998669579999999999975594585679999999965778789
No 2
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=1.00 E-value=1 Score=1496.23 Aligned_cols=665 Identities=45% Similarity=0.784 Sum_probs=635.0
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEE
Q ss_conf 98889982598436888740289509916551432014799841013790589885985888499933431782499999
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~gl~Y~~G~F~Q~i~dG~Q~e~~d~Wl~~~~~we~~~~~~~~~v~~~g~v~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||||+||||+|+|.||||+|.||+|++.++|||++|++.+++|+|+|+++. + + +|++++.|+|+|
T Consensus 126 ~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~ 201 (796)
T 1l5w_A 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQA 201 (796)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEE
T ss_pred HHHCCCCEEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCEEECCCCEEEEEECCEEEE--C-C-EECCCCEEEEEE
T ss_conf 97479982788621327762687028856871676334799622406882799860998854--1-2-204882699998
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 74236888986439999999534887654444696123566754331014323114789830000312102225567259
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~r~It~~LY~~d~~~~gk~lRl~Qe~fl~~a~l 160 (689)
||+|||||+++++|+||||++++++ .|++..|+.|+|..++++++.+|+||++|||+|++++||++||+||||||+|++
T Consensus 202 yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~l 280 (796)
T 1l5w_A 202 WDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSV 280 (796)
T ss_dssp EEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCEEEEEEEEECCCC-CCCHHHCCCCCHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 0056367777745999998824686-347543277657666556476743664476999864439889987999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHH
Q ss_conf 99999999804663333489981898599631120999999999750999578843027508975068714566341199
Q 005595 161 QDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 240 (689)
Q Consensus 161 q~iir~~~~~~g~~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~ 240 (689)
|+|+|++++.++ +++.|++|++||||||||||++|||||+++|+++++|++||++++.+|+||||||+|||+|+||++
T Consensus 281 q~ilr~~~~~~~--~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~ 358 (796)
T 1l5w_A 281 ADILRRHHLAGR--KLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVK 358 (796)
T ss_dssp HHHHHHHHHTTC--CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHH
T ss_pred HHHHHHHHHCCC--CHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCHHHHHCCCHH
T ss_conf 999999987089--844558761898448842868999999986641798789999861227788568717666308999
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHC
Q ss_conf 99976246799999999999999997469982100113532479999921050101120796024123559998742102
Q 005595 241 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA 320 (689)
Q Consensus 241 l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~ 320 (689)
+++++||++++||++||.+|+.++...+|.+.+.+..++++++ ++|||+++||++|++|||||++|++++++++|+
T Consensus 359 l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~ 434 (796)
T 1l5w_A 359 LVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHD----KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFP 434 (796)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEET----TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCC----CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9998757988887166999999999865982887743122107----954489999984371133138999998767766
Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 71111578876312467854534557900258999741865101460257632004899789999999999999999999
Q 005595 321 DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADY 400 (689)
Q Consensus 321 ~~~~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~ 400 (689)
+|+.++|.+|.|||||||+++|+.+|||+++++|++++| ++|.+|++.|+++.++++|++|+++|.++|++||++|+++
T Consensus 435 ~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g-~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 513 (796)
T 1l5w_A 435 EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEF 513 (796)
T ss_dssp HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCC-CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 798707663388848884778500259768899998549-6011488999988853997899999999999999999999
Q ss_pred HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99994996799981586555410110111233567999999750194455899995999972289589878999999999
Q 005595 401 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 401 i~~~~g~~~~~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~ 480 (689)
+++++|+.+||++|||+||||||+||||+||+++++++|.+|++ +|.. +.+|+||||+|||||+|++||.|||+|++
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~ 590 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINK 590 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCEEEEEECCHHHCCCCEEHHHHHHHHHHHHC-CCCC--CCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99983998599966676663053541548708989999999850-8877--78994999996277657888999999999
Q ss_pred HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCC
Q ss_conf 87664299588992359998388977897323576311236877756788212377613852766147615899998338
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 560 (689)
Q Consensus 481 ~a~~in~d~~~~~~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg 560 (689)
++++||+||+++++|||+|+||||+++||+|+||||+|||||+||+|||||||||||+||+||||||||||||+.+++|+
T Consensus 591 va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~ 670 (796)
T 1l5w_A 591 VADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGE 670 (796)
T ss_dssp HHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCG
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHCCCC
T ss_conf 99874246014996079997899989999986520020158999878776577899986981256747754101230589
Q ss_pred CCEEEECCCCCCCHHHHHHCCCCC---CCCCHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 526650465431044552026899---99992579999888419889999---488999872088999886332059937
Q 005595 561 ENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFP 634 (689)
Q Consensus 561 ~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~~Df~ 634 (689)
+|||+||..+++|.+++..+ |++ |..+|.++++++.+.+|.|+..+ |.+||++|..+ .+|+|+|++||+
T Consensus 671 ~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~----~~D~~~v~~Df~ 745 (796)
T 1l5w_A 671 ENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQ----GGDPYLVMADFA 745 (796)
T ss_dssp GGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT----TCCTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHCC-CCHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC----CCCCEEEHHHHH
T ss_conf 84899559899999999704-3777775059999999999972998988678999999999663----898333221089
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 799999999998109889999999972168999968999999999725655
Q 005595 635 SYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 685 (689)
Q Consensus 635 ~Y~~~q~~~~~~Y~d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~~~ 685 (689)
||++||+++..+|+|+++|++|++.|||.+|+|||||||+||+++||+++|
T Consensus 746 ~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 746 AYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 999999999997209999999999999856915856799999999857798
No 3
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=1.00 E-value=1 Score=1492.36 Aligned_cols=674 Identities=49% Similarity=0.832 Sum_probs=638.1
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEE
Q ss_conf 98889982598436888740289509916551432014799841013790589885985888499933431782499999
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~gl~Y~~G~F~Q~i~dG~Q~e~~d~Wl~~~~~we~~~~~~~~~v~~~g~v~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||||+||||+|+|+||||+|.||+||+.++|||++|++.+++|+|+|+|+...+| ..|++++.|+|+|
T Consensus 136 ~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g-~~w~~~~~v~av~ 214 (824)
T 2gj4_A 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMP 214 (824)
T ss_dssp HHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEE
T ss_pred HHHCCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCC-CEECCCCEEEEEE
T ss_conf 975799837884130688706984589888707640136996420477736899738877754899-5432561489763
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 74236888986439999999534887654444696123566754331014323114789830000312102225567259
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~r~It~~LY~~d~~~~gk~lRl~Qe~fl~~a~l 160 (689)
||+|||||++++||++|||+++ +...|++..|+.|+|..++.+.+.+++||++|||+|++++||++||+|||||++||+
T Consensus 215 yD~pi~Gy~~~~vn~lRlW~a~-~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~l 293 (824)
T 2gj4_A 215 YDTPVPGYRNNVVNTMRLWSAK-APNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATL 293 (824)
T ss_dssp EEEEEECSSSSCEEEEEEEEEE-CCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEEEEEE-CCCCCCHHHCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 4677678778845999999963-675556553267639899863561542076889999754337676324555441389
Q ss_pred HHHHHHHHHCC-CC-----CCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHH
Q ss_conf 99999999804-66-----3333489981898599631120999999999750999578843027508975068714566
Q 005595 161 QDMILRFKERK-SG-----RQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEAL 234 (689)
Q Consensus 161 q~iir~~~~~~-g~-----~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~ 234 (689)
|||+|+|++.+ |. .+++.|++|++||||||||||++|||||+++|+++++|++||++++.+|+||||||+|||+
T Consensus 294 qdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~egl 373 (824)
T 2gj4_A 294 QDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373 (824)
T ss_dssp HHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGS
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHH
T ss_conf 99999999732364334455421157776797169841869999999987751788789999836758998379758886
Q ss_pred HHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHH
Q ss_conf 34119999976246799999999999999997469982100113532479999921050101120796024123559998
Q 005595 235 EKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDIL 314 (689)
Q Consensus 235 e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~ 314 (689)
|+||.++++++||+|++||++||.+|+..+...++.+.+.+.+++++++ ++.++|||+++||++|++|||||++|++++
T Consensus 374 E~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~i 452 (824)
T 2gj4_A 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEIL 452 (824)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHH
T ss_pred HHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCCCCHHHHHHHHCCCEEEECHHHHHHH
T ss_conf 5454999998675598999998799999999876995899976655440-578834289999983484345748899998
Q ss_pred HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 74210271111578876312467854534557900258999741865101460257632004899789999999999999
Q 005595 315 KADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASK 394 (689)
Q Consensus 315 ~~~~~~~~~~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K 394 (689)
++++|++|+..+|.+|.|||||||+++|+.+|||+++++|++++| ++|.++++++++|.++.+|..|+++|.++|++||
T Consensus 453 k~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig-~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK 531 (824)
T 2gj4_A 453 KKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENK 531 (824)
T ss_dssp HHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHC-SGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCC-CHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 557767888707012024537827566401479768898988557-1532087889988851661899999999999978
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 99999999994996799981586555410110111233567999999750194455899995999972289589878999
Q 005595 395 KHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 474 (689)
Q Consensus 395 ~~L~~~i~~~~g~~~~~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~i 474 (689)
++|++++++++|+.+||++|||+||||||+||||+||+++++++|.+|++ +|. .+.+|+||||+|||||+|++||.|
T Consensus 532 ~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~--~~~~p~q~If~GKA~P~y~~aK~i 608 (824)
T 2gj4_A 532 LKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPN--KFVVPRTVMIGGKAAPGYHMAKMI 608 (824)
T ss_dssp HHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTT--SCCCCEEEEEECCCCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHH-CCC--CCCCCEEEEEEEECCHHHHHHHHH
T ss_conf 99899999996998689955676662032413430688879999999982-888--888997999997077757988999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHH
Q ss_conf 99999987664299588992359998388977897323576311236877756788212377613852766147615899
Q 005595 475 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 554 (689)
Q Consensus 475 Ik~I~~~a~~in~d~~~~~~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~ 554 (689)
||+|+++++++|+||+++++|||+|+||||+++||+|+||||+|||||+||+|||||||||||+||+|||||+|||||||
T Consensus 609 Ikli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi 688 (824)
T 2gj4_A 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEM 688 (824)
T ss_dssp HHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHH
T ss_conf 99999999986258455996079997899989999986412231258999878776577899986964999846856212
Q ss_pred HHHHCCCCEEEECCCCCCCHHHHHHCCCCC---CCCCHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCC
Q ss_conf 998338526650465431044552026899---99992579999888419889999---488999872088999886332
Q 005595 555 RQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFL 628 (689)
Q Consensus 555 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~ 628 (689)
.+++|++|||+||..+++|..++..+ |++ |+.++.++++++.+.+|+|+..+ |.+||++|.. +|+||
T Consensus 689 ~e~vG~~Ngf~FG~~~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~ 761 (824)
T 2gj4_A 689 AEEAGEENFFIFGMRVEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFK 761 (824)
T ss_dssp HHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTC
T ss_pred HHCCCCCCEEEECCCHHHHHHHHHCC-CCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC------CCHHH
T ss_conf 31058887799378589999999758-797888537999999999997288899984889999999872------78256
Q ss_pred CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 059937799999999998109889999999972168999968999999999725655448
Q 005595 629 VGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 688 (689)
Q Consensus 629 v~~Df~~Y~~~q~~~~~~Y~d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~~~~~~ 688 (689)
|++||+||++||+++..+|.|+++|.+||+.|||.+|+|||||||+||+++||+++|++.
T Consensus 762 ~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~ 821 (824)
T 2gj4_A 762 VFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQ 821 (824)
T ss_dssp TGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 662089999999999875149899999999999972874827899999999748787788
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=1.00 E-value=1 Score=1469.71 Aligned_cols=660 Identities=45% Similarity=0.747 Sum_probs=623.9
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEE
Q ss_conf 98889982598436888740289509916551432014799841013790589885985888499933431782499999
Q 005595 1 MATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVA 80 (689)
Q Consensus 1 la~l~~p~~g~gl~Y~~G~F~Q~i~dG~Q~e~~d~Wl~~~~~we~~~~~~~~~v~~~g~v~~~~~g~~~w~~~~~v~a~~ 80 (689)
|||||+|++||||||+||||+|+|.||||+|.||+|++.|+|||++|++.+++|+|+|+ .|+|+|
T Consensus 127 ~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~ 191 (796)
T 2c4m_A 127 AVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDM---------------KTRAIP 191 (796)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTE---------------EEEEEE
T ss_pred HHHCCCCEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCEEEECCCCEEEEEECCE---------------EEEEEE
T ss_conf 97579986898624158871798258978861776545799604764772789974998---------------999999
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 74236888986439999999534887654444696123566754331014323114789830000312102225567259
Q 005595 81 YDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASL 160 (689)
Q Consensus 81 yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~r~It~~LY~~d~~~~gk~lRl~Qe~fl~~a~l 160 (689)
||+|+|||+++++|+||||++++++ .|+|..|+.|+|..++++++.+|+||++|||+|++++||++||+||||||+|++
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~l 270 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWE-EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASL 270 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESS-SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCEEEEEEEECCCCC-CCCHHHCCCCCHHHHHHCHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7246567677735899988605663-246543267656565446275616543376999985409889975999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHH
Q ss_conf 99999999804663333489981898599631120999999999750999578843027508975068714566341199
Q 005595 161 QDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQA 240 (689)
Q Consensus 161 q~iir~~~~~~g~~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~ 240 (689)
|+|+|++++.++ +++.|++|++||||||||||++|||||+++|+++++|++||++++.+|+||||||+|||+|+||++
T Consensus 271 q~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~ 348 (796)
T 2c4m_A 271 QAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQ 348 (796)
T ss_dssp HHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHH
T ss_pred HHHHHHHHHHCC--CHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCCHH
T ss_conf 999999987088--734459970899389717768999999974541798789999860217888568637776417999
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHC
Q ss_conf 99976246799999999999999997469982100113532479999921050101120796024123559998742102
Q 005595 241 VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA 320 (689)
Q Consensus 241 l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~ 320 (689)
+++++||++++||++||.+|+.++... |.+++++.+++++++ ++|||+++||++|++|||||++|++++++++|+
T Consensus 349 l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~ 423 (796)
T 2c4m_A 349 IFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETINRMAPIQH----GTVHMAWIACYAAYSINGVAALHTEIIKAETLA 423 (796)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHCSEET----TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHC-CCCHHHHHCCCCEEC----CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHH
T ss_conf 999875798888707689999999845-782766532541248----811699999984283210238778886136666
Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 71111578876312467854534557900258999741865101460257632004899789999999999999999999
Q 005595 321 DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADY 400 (689)
Q Consensus 321 ~~~~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~ 400 (689)
+|+.++|.+|.|||||||+++|+.+|||+++++|++++|+++|.+|+++|++|.++++|++|+++|.++|++||++|+++
T Consensus 424 ~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 503 (796)
T 2c4m_A 424 DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEW 503 (796)
T ss_dssp HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69872864006561884667750035975889999866921221186999998861998899999999999999999999
Q ss_pred HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99994996799981586555410110111233567999999750194455899995999972289589878999999999
Q 005595 401 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 480 (689)
Q Consensus 401 i~~~~g~~~~~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~ 480 (689)
|++++|+.+||++|||+||||||+||||+||+++++++|.+|++ +|+. +.+|+||||+|||||+|++||.|||+|++
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~ 580 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLT--DIPARTVIFGAKAAPGYVRAKAIIKLINS 580 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCC--SSCCEEEEEECCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCEEEEEECCHHHCCCCEEHHHHHHHHHHHHH-CCCC--CCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99985998799976777764042530568829999999999860-8877--78994999996287767988999999999
Q ss_pred HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCC
Q ss_conf 87664299588992359998388977897323576311236877756788212377613852766147615899998338
Q 005595 481 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 560 (689)
Q Consensus 481 ~a~~in~d~~~~~~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg 560 (689)
++++||+||+++++|||+|+||||+++||+|+||||+|||||+||+|||||||||||+||+||||||||||||+.+++|+
T Consensus 581 va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~ 660 (796)
T 2c4m_A 581 IADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGE 660 (796)
T ss_dssp HHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCG
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEHHHHCCC
T ss_conf 99874246014996079997999989999986412240258999878876077899976974770457768650221697
Q ss_pred CCEEEECCCCCCCHHHHHHCCCCC---CCCCHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 526650465431044552026899---99992579999888419889999---488999872088999886332059937
Q 005595 561 ENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFP 634 (689)
Q Consensus 561 ~n~~~fG~~~d~v~~~~~~~~y~~---~~~~~~~~~~~~~~~~G~f~~~~---~~~l~~~l~~~~~~~~~D~~~v~~Df~ 634 (689)
+|||+||.++++|.+++.. |++ |..+|.++++++.+.+|.|+..+ |.+||++|....+.+.+|+|+|++||+
T Consensus 661 ~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~ 738 (796)
T 2c4m_A 661 ENAYIFGARVEELPALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFA 738 (796)
T ss_dssp GGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH--HCHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 7479956845429999973--18487761599899999999719889987799999999997014677898332030189
Q ss_pred HHHHHHHHHHHHH-CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7999999999981-09889999999972168999968999999999725655448
Q 005595 635 SYLEAQDRVDQAY-KDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 688 (689)
Q Consensus 635 ~Y~~~q~~~~~~Y-~d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~~~~~~ 688 (689)
||++||++|.+.| +|+++|++|++.|||.+|+|||||||+||+++||+++|++.
T Consensus 739 ~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~ 793 (796)
T 2c4m_A 739 DYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPA 793 (796)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999999878999999999999855805866899999999758787784
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=386.69 Aligned_cols=431 Identities=15% Similarity=0.161 Sum_probs=308.4
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 39999999534887654444696123566754331014323114789830000312102225567259999999998046
Q 005595 93 TISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS 172 (689)
Q Consensus 93 ~~~lrlw~a~v~~~~~~l~~~~~~~~~~~~~~~~~~r~It~~LY~~d~~~~gk~lRl~Qe~fl~~a~lq~iir~~~~~~g 172 (689)
...+++|.... .++++|+++++.|+.+... .-...+|++++.. +-.--..++.||+.++++.+ +.+ ..+.
T Consensus 74 ~~~~~~~~~~~--~gv~~y~id~~~~~~r~~~-----~~~~~~Y~~~~~~-~~~d~~~rf~~f~~a~l~~~-~~l-~~~~ 143 (536)
T 3vue_A 74 YERVRFFHCYK--RGVDRVFIDHPSFLEKVWG-----KTGEKIYGPDTGV-DYKDNQMRFSLLCQAALEAP-RIL-NLNN 143 (536)
T ss_dssp EEEEEEEECEE--TTEEEEEEECTTTTCC------------------------CHHHHHHHHHHHHHHHHH-HHC-CCCC
T ss_pred EEEEEEEEEEE--CCCEEEEECCHHHHCCCCC-----CCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHH-HHH-CCCC
T ss_conf 37899999997--8955999647554123346-----6778666887567-66417999999999999999-973-0265
Q ss_pred CCCCCC-CCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHHHHHHH-CHHHH
Q ss_conf 633334-8998189859963112099999999975099957884302750897506871456634119999976-24679
Q 005595 173 GRQWSE-FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHM 250 (689)
Q Consensus 173 ~~~~~~-l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~-lp~~~ 250 (689)
...+.. .+.++++||||||+|++ |.+++......+ . .....+|||+||+.+||+ |+.+.+... ++...
T Consensus 144 ~~~~~~~~~~ddIiH~hDW~t~l~-~~~l~~~~~~~~-----~--~~~~~~V~TiHnl~~qg~--~~~~~~~~~~~~~~~ 213 (536)
T 3vue_A 144 NPYFKGTYGEDVVFVCNDWHTGPL-ASYLKNNYQPNG-----I--YRNAKVAFCIHNISYQGR--FAFEDYPELNLSERF 213 (536)
T ss_dssp CTTCCSCCCSCEEEEEESGGGSTH-HHHHHHHTTTTT-----S--STTCEEEEEESCTTCCCE--EEGGGGGGGCCCGGG
T ss_pred CHHHHCCCCCCEEEEECCCHHHHH-HHHHHHHHHHHH-----H--HCCCCEEEEECCCCCCCC--CCHHHHHHCCCCHHH
T ss_conf 301101479987999776048999-999998640233-----2--025634542157422455--553336441896564
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHC-CH--HH-HC
Q ss_conf 9999999999999997469982100113532479999921050101120796024123559998742102-71--11-15
Q 005595 251 EIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DY--VS-LW 326 (689)
Q Consensus 251 ~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~-~~--~~-l~ 326 (689)
.. ..+.+......+ ..+.+||++.++..|+.|+|||++|++++.+. ++ ++ .. ..
T Consensus 214 ----------~~--------~~~~~~~~~~~~---~~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~ 271 (536)
T 3vue_A 214 ----------RS--------SFDFIDGYDTPV---EGRKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMR 271 (536)
T ss_dssp ----------HH--------HHEEEETTTSTT---CEEEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSC
T ss_pred ----------CC--------HHHHHHCCCCCC---CCCCHHHHHHHHHHCCEEEECCHHHHHHHHCC-CCCCCCCCCCCC
T ss_conf ----------01--------033331146410---03304399999985367787687885343126-344522001254
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 78876312467854534557900258999741865101460257632004899789999999999999999999999949
Q 005595 327 PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG 406 (689)
Q Consensus 327 p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g 406 (689)
+.++.+|+||||+..| ||..+..+...+.. .+. + +.|..||..|.. ++|
T Consensus 272 ~~~i~~I~NGiD~~~~----~p~~d~~~~~~~~~-----------------~~~-----~-~~K~~~k~~l~~----~~g 320 (536)
T 3vue_A 272 LTGITGIVNGMDVSEW----DPSKDKYITAKYDA-----------------TTA-----I-EAKALNKEALQA----EAG 320 (536)
T ss_dssp CCSCEECCCCCCTTTS----CTTTCSSSSCCCCT-----------------TTH-----H-HHHHHHHHHHHH----HTT
T ss_pred CCCEEEEECCCCHHHC----CCCCCCCCCCCCCH-----------------HHH-----H-HHHHHHHHHHHH----HCC
T ss_conf 5781899799664214----88776210014443-----------------455-----5-656777999998----619
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 96799981586555410110111233567999999750194455899995999972289589878999999999876642
Q 005595 407 VTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 486 (689)
Q Consensus 407 ~~~~~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in 486 (689)
+..+++.|++++|+|++.+||.++ ++.++.++.+ ...++++.|.|.+.++.. +...+..
T Consensus 321 l~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l~~------------~~~~l~l~G~G~~~~~~~------~~~~~~~-- 379 (536)
T 3vue_A 321 LPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPELMQ------------EDVQIVLLGTGKKKFEKL------LKSMEEK-- 379 (536)
T ss_dssp SCCCTTSCEEEEECCBSGGGCHHH-HHHHHHHHTT------------SSCEEEEECCBCHHHHHH------HHHHHHH--
T ss_pred CCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHHHH------------HCCEEEEEECCCCHHHHH------HHHHHHH--
T ss_conf 987999758999965302378478-9999997685------------498599995467268999------9998761--
Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEE
Q ss_conf 99588992359998388977897323576311236877756788212377613852766147615899998338526650
Q 005595 487 TDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 566 (689)
Q Consensus 487 ~d~~~~~~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg~n~~~f 566 (689)
.++ +|.|...++....+.++++||++++||+ +|+||++.|-||..|+++|++..|+..|++.+ |+|||.|
T Consensus 380 ----~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d--g~~G~~~ 449 (536)
T 3vue_A 380 ----YPG--KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIE--GKTGFHM 449 (536)
T ss_dssp ----STT--TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB--TTTEEEC
T ss_pred ----CCC--CEEEEEECCHHHHHHHHHHHHEEECCCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHEEEC--CCCCCCC
T ss_conf ----688--5499971468889999986234253465--68988899999986998999079982220227--9876324
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 46543104455202689999992579999888419-88999948899987208899988633205993779999999999
Q 005595 567 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG-AFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQ 645 (689)
Q Consensus 567 G~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G-~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~~Y~~~q~~~~~ 645 (689)
+... .+| .|.+.|.++|.++|. +++.
T Consensus 450 ~~~~----------------------------~~g~l~~~~d~~~la~ai~-------------------------ral~ 476 (536)
T 3vue_A 450 GRLS----------------------------VDCKVVEPSDVKKVAATLK-------------------------RAIK 476 (536)
T ss_dssp CCCC----------------------------SCTTCCCHHHHHHHHHHHH-------------------------HHHH
T ss_pred CCCC----------------------------CCEEEECCCCHHHHHHHHH-------------------------HHHH
T ss_conf 6677----------------------------7515879999999999999-------------------------9998
Q ss_pred HHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 81098899999999721689999689999999997256
Q 005595 646 AYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 683 (689)
Q Consensus 646 ~Y~d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~ 683 (689)
.|.++ .|.+|++++|++ +|||++++++|.+-.-.+
T Consensus 477 ~~~~~-~~~~~~~~am~~--~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 477 VVGTP-AYEEMVRNCMNQ--DLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HTTSH-HHHHHHHHHHHS--CCSSHHHHHHHHHHHHTT
T ss_pred HCCCH-HHHHHHHHHHHH--CCCHHHHHHHHHHHHHHH
T ss_conf 52959-999999998773--599999999999999986
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=1.00 E-value=1 Score=235.95 Aligned_cols=366 Identities=14% Similarity=0.099 Sum_probs=240.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEE
Q ss_conf 12102225567259999999998046633334899818985996311209999999997509995788430275089750
Q 005595 147 LRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTN 226 (689)
Q Consensus 147 lRl~Qe~fl~~a~lq~iir~~~~~~g~~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~ 226 (689)
-.-.+|.||+.+.++.+. ... . ..|+++|+||||++++ +.+||... ...++|||+
T Consensus 158 dd~~~F~y~~~avl~~l~----~~~------~-~~pdIiH~HDW~tg~~-~~~Lk~~~-------------~~i~tVfTi 212 (725)
T 3nb0_A 158 NDAILLGYTVAWFLGEVA----HLD------S-QHAIVAHFHEWLAGVA-LPLCRKRR-------------IDVVTIFTT 212 (725)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHC------C-SEEEEEEEESGGGCTH-HHHHHHTT-------------CSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH----HCC------C-CCCCEEEECCHHHHHH-HHHHHHHC-------------CCCCEEEEE
T ss_conf 189999999999999988----627------8-9984799473666289-99999757-------------899899997
Q ss_pred CCCH---H---HHHHHCHHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHC
Q ss_conf 6871---4---566341199-99976246799999999999999997469982100113532479999921050101120
Q 005595 227 HTVL---P---EALEKWSQA-VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVS 299 (689)
Q Consensus 227 HT~~---~---~g~e~f~~~-l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~ 299 (689)
|+.. + ||. |+.. .++. ++.+++.. .+.+ +..++|.+.+++.
T Consensus 213 H~telGR~lagqg~--~~~y~~L~~-----------------------~~~d~ea~-~~~i------~~~~~~EKaga~~ 260 (725)
T 3nb0_A 213 HATLLGRYLCASGS--FDFYNCLES-----------------------VDVDHEAG-RFGI------YHRYCIERAAAHS 260 (725)
T ss_dssp SSCHHHHHHTSSSC--SCHHHHGGG-----------------------CCHHHHHH-HTTC------HHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHCCC--CCHHHHHHH-----------------------CCCCHHHH-HHCH------HHHHHHHHHHHHH
T ss_conf 01646665652489--735443555-----------------------08973444-3110------6888999999974
Q ss_pred CCCEEEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 79602412355999874210271111578876312467854534557900258999741865101460257632004899
Q 005595 300 AHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADN 379 (689)
Q Consensus 300 S~~vNgVS~~h~ei~~~~~~~~~~~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d 379 (689)
|+.++|||+.+++++++ +++ .-+..+ |.||||+..| +|..
T Consensus 261 AD~ITTVS~~yA~Ei~~-Ll~----r~~d~i--IpNGID~~~f----~p~~----------------------------- 300 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAEH-LLK----RKPDGI--LPNGLNVIKF----QAFH----------------------------- 300 (725)
T ss_dssp SSEEEESSHHHHHHHHH-HTS----SCCSEE--CCCCBCCCCC----SSTT-----------------------------
T ss_pred CCEEEECCHHHHHHHHH-HHC----CCCCEE--ECCCCCCCCC----CCCH-----------------------------
T ss_conf 89999899899999999-966----999879--7588103545----8413-----------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCC-CCCEEEEECCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 789999999999999999999999949--9679-9981586555410-11011123356799999975019445589999
Q 005595 380 TELQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 455 (689)
Q Consensus 380 ~~~~~~~~~~K~~~K~~L~~~i~~~~g--~~~~-~~~~~~~~vrR~~-eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p 455 (689)
+| + ..|..+|++|++.++.+++ +.++ ++.++++.+.|++ ++||.+| ++.++.++.+.+..... +..=
T Consensus 301 -~~---~-~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~~~~~---~~~v 371 (725)
T 3nb0_A 301 -EF---Q-NLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLKVSGS---KKTV 371 (725)
T ss_dssp -HH---H-HHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHHHTTC---CCEE
T ss_pred -HH---H-HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHH-HHHHHHHHHHHHHHCCC---CCCE
T ss_conf -56---7-77999999999998763046778897760499999983234488799-99999999998763468---9837
Q ss_pred EEEEEEECCCCCCH-----------------------HHHHHHHHHH--------------------------------H
Q ss_conf 59999722895898-----------------------7899999999--------------------------------9
Q 005595 456 RTIMIGGKAFATYT-----------------------NAKRIVKLVN--------------------------------D 480 (689)
Q Consensus 456 ~q~If~GKa~P~y~-----------------------~aK~iIk~I~--------------------------------~ 480 (689)
+-||+...+.-++. .||.+..... +
T Consensus 372 vafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~ 451 (725)
T 3nb0_A 372 VAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILA 451 (725)
T ss_dssp EEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH
T ss_conf 99999378778876666311358999998999999987688999974053445577789898886396777888888776
Q ss_pred HH--------------------------HHHCCCCCCCCCCEEEEECCCCHHH-------HHHHCCCCCCCCCCCCCCCC
Q ss_conf 87--------------------------6642995889923599983889778-------97323576311236877756
Q 005595 481 VG--------------------------EVVNTDPEVNSYLKVVFVPNYNVSV-------AELLIPGSELSQHISTAGME 527 (689)
Q Consensus 481 ~a--------------------------~~in~d~~~~~~lkVvflenY~~~l-------A~~l~~g~Dv~l~~s~~~~E 527 (689)
.. ++.+-.....++.||+|++.|--.. -..++++||++.+||+ +|
T Consensus 452 ~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~E 529 (725)
T 3nb0_A 452 LRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YE 529 (725)
T ss_dssp HCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SB
T ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEECCC--CC
T ss_conf 4047788997366603557754899999864877776774549993331478886410278999864659996566--57
Q ss_pred CCCCCHHHHHHCCCEEEEECCCHHHHHHHHHCC-----CCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 788212377613852766147615899998338-----526650465431044552026899999925799998884198
Q 005595 528 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE-----ENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA 602 (689)
Q Consensus 528 asGTs~Mka~~NG~l~istlDG~~vE~~~~~Gg-----~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~ 602 (689)
+||...|-||..|++.|++.-|...|++.+..+ ++|+.|-..
T Consensus 530 gfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r--------------------------------- 576 (725)
T 3nb0_A 530 PWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR--------------------------------- 576 (725)
T ss_dssp SSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC---------------------------------
T ss_pred CCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCEEEEECC---------------------------------
T ss_conf 88789999998199889927997066654023456777856999478---------------------------------
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 8999948899987208899988633205993779999999999810--9889999999972168999968999999999
Q 005595 603 FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK--DQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 679 (689)
Q Consensus 603 f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~~Y~~~q~~~~~~Y~--d~~~W~~~~~~~ia~~g~FS~drti~eY~~~ 679 (689)
.+++++++.++|. +++..|. ++..+.+|..++...+..|||++++++|.+-
T Consensus 577 -d~~d~ee~aeaLa-------------------------~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~ 629 (725)
T 3nb0_A 577 -RFKAPDESVEQLV-------------------------DYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKA 629 (725)
T ss_dssp -SSSCHHHHHHHHH-------------------------HHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHH-------------------------HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf -8899899999999-------------------------9999987099999999999999999839999999999999
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=176.37 Aligned_cols=333 Identities=17% Similarity=0.183 Sum_probs=225.3
Q ss_pred CCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99818985996311209999999997509995788430275089750687145663411999997624679999999999
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+||+||+|+++++++ +.+++.. ...+..+|+|.|+..+++. ++...+..
T Consensus 129 ~~~DiIh~~~~~~~~~-~~~~~~~------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~--------------- 178 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMT-PVYMRYA------------ETPEIPSLLTIHNIAFQGQ--FGANIFSK--------------- 178 (485)
T ss_dssp CCCSEEEEEHHHHTTH-HHHHHHS------------SSCCCCEEEEESCTTCCCE--ECGGGGGG---------------
T ss_pred CCCCEEEECCCCHHHH-HHHHHHC------------CCCCCCEEEEECCCCCCCC--CCHHHHHH---------------
T ss_conf 9998899646305578-9997310------------3589978999667544687--88778734---------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHC-CHH---HHCCCCCCCCCC
Q ss_conf 9999997469982100113532479999921050101120796024123559998742102-711---115788763124
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYV---SLWPNKLQNKTN 335 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~-~~~---~l~p~ki~~ItN 335 (689)
.+.....+ ....... .....+.+.++..++.+.+||+...+.+....++ ++. ...+.++.-|-|
T Consensus 179 --------~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~n 246 (485)
T 1rzu_A 179 --------LALPAHAF-GMEGIEY---YNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVN 246 (485)
T ss_dssp --------SCCCGGGS-STTTTEE---TTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCC
T ss_pred --------CCCCHHHC-CCCCCCC---CCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECC
T ss_conf --------39980320-2000132---56235999888646779960875899983543576658999860688169708
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 67854534557900258999741865101460257632004899789999999999999999999999949967999815
Q 005595 336 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 415 (689)
Q Consensus 336 GV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~~~~~~ 415 (689)
||+...| +|..+..+...+. .++ + ..|..+|..+. +++|++-+ +.++
T Consensus 247 gvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r----~~~~~~~~-~~~~ 293 (485)
T 1rzu_A 247 GIDADVW----NPATDHLIHDNYS-----------------AAN------L-KNRALNKKAVA----EHFRIDDD-GSPL 293 (485)
T ss_dssp CBCTTTS----CTTTCTTSSSCCB-----------------TTB------C-TTHHHHHHHHH----HHHTCCCS-SSCE
T ss_pred CCCCCCC----CCCCCCCCCCCCC-----------------CCC------H-HHHHHHHHHHH----HHCCCCCC-CCEE
T ss_conf 9860205----8866511000124-----------------324------4-56788699999----96298889-9839
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 86555410110111233567999999750194455899995999972289589878999999999876642995889923
Q 005595 416 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 495 (689)
Q Consensus 416 ~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~~l 495 (689)
++++.|+..+|+.++ ++.++.++.+ .++++++.|.+.+.+.. .+.++++.. ++
T Consensus 294 i~~vGrl~~~Kg~~~-li~a~~~l~~------------~~~~l~ivG~g~~~~~~------~l~~~~~~~------~~-- 346 (485)
T 1rzu_A 294 FCVISRLTWQKGIDL-MAEAVDEIVS------------LGGRLVVLGAGDVALEG------ALLAAASRH------HG-- 346 (485)
T ss_dssp EEEESCBSTTTTHHH-HHTTHHHHHH------------TTCEEEEEECBCHHHHH------HHHHHHHHT------TT--
T ss_pred EEEECCCCCCCCHHH-HHHHHHHHHH------------CCCEEEEEECCCHHHHH------HHHHHHHHC------CC--
T ss_conf 999725753128799-9999999872------------69569999689468999------999999867------88--
Q ss_pred EEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHH-------CCCCEEEECC
Q ss_conf 599983889778973235763112368777567882123776138527661476158999983-------3852665046
Q 005595 496 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 568 (689)
Q Consensus 496 kVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~-------Gg~n~~~fG~ 568 (689)
+|.|+.+++......++++||++++||+ +|++|++-+-||..|.+.|++..|+..|+++.. +++||++|
T Consensus 347 ~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~-- 422 (485)
T 1rzu_A 347 RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF-- 422 (485)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE--
T ss_pred CEEEECCCCHHHHHHHHHCCCEEEECCC--CCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEE--
T ss_conf 6899438997999999852999997844--688777999999779977980899831132156533234567763486--
Q ss_pred CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 54310445520268999999257999988841988999948899987208899988633205993779999999999810
Q 005595 569 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 648 (689)
Q Consensus 569 ~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~~Y~~~q~~~~~~Y~ 648 (689)
.+.+.++|.++|. ++...|.
T Consensus 423 -----------------------------------~~~d~~~la~~i~-------------------------~ll~~~~ 442 (485)
T 1rzu_A 423 -----------------------------------SPVTLDGLKQAIR-------------------------RTVRYYH 442 (485)
T ss_dssp -----------------------------------SSCSHHHHHHHHH-------------------------HHHHHHT
T ss_pred -----------------------------------CCCCHHHHHHHHH-------------------------HHHHHHC
T ss_conf -----------------------------------7899999999999-------------------------9998727
Q ss_pred CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 98899999999721689999689999999997
Q 005595 649 DQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 680 (689)
Q Consensus 649 d~~~W~~~~~~~ia~~g~FS~drti~eY~~~i 680 (689)
|++.+.+|..++.+. .|||++++++|.+-.
T Consensus 443 ~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 443 DPKLWTQMQKLGMKS--DVSWEKSAGLYAALY 472 (485)
T ss_dssp CHHHHHHHHHHHHTC--CCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HCCHHHHHHHHHHHH
T ss_conf 999999999999988--689699999999999
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=175.37 Aligned_cols=335 Identities=16% Similarity=0.169 Sum_probs=225.0
Q ss_pred CCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99818985996311209999999997509995788430275089750687145663411999997624679999999999
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+||+||+|+++++++ +.+++. ...+..+|+|.|+..+++. ++...+..
T Consensus 128 ~~~Divh~~~~~~~~~-~~~~~~-------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~--------------- 176 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLA-PAYLAA-------------RGRPAKSVFTVHNLAYQGM--FYAHHMND--------------- 176 (485)
T ss_dssp CCCSEEEEETGGGTTH-HHHHHH-------------TTCSSEEEEEESCTTCCCE--EEGGGGGT---------------
T ss_pred CCCCEEEEECCCHHHH-HHHHHH-------------CCCCCCEEEEECCCCCCCC--CCHHHHHH---------------
T ss_conf 8997899606213378-999754-------------3689978999468413578--89888876---------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHC-CHHHH---CC--CCCCCC
Q ss_conf 9999997469982100113532479999921050101120796024123559998742102-71111---57--887631
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP--NKLQNK 333 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~-~~~~l---~p--~ki~~I 333 (689)
.+.....+ ....... .....+.+.++..++.+.+||+...+.+....++ +...+ .+ .++.-|
T Consensus 177 --------~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (485)
T 2qzs_A 177 --------IQLPWSFF-NIHGLEF---NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGV 244 (485)
T ss_dssp --------TTCCGGGC-STTTTEE---TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEEC
T ss_pred --------CCCCCHHC-CCCCCCC---CCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE
T ss_conf --------49991321-3111232---46546999998753868856889999985401472468999850667866997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 24678545345579002589997418651014602576320048997899999999999999999999999499679998
Q 005595 334 TNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNS 413 (689)
Q Consensus 334 tNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~~~~g~~~~~~~ 413 (689)
-|||+...| +|..+..+...++ .++ + ..|..+|..+. +++|++.+++.
T Consensus 245 ~ngvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r----~~~~~~~~~~~ 292 (485)
T 2qzs_A 245 LNGVDEKIW----SPETDLLLASRYT-----------------RDT------L-EDKAENKRQLQ----IAMGLKVDDKV 292 (485)
T ss_dssp CCCCCTTTS----CTTTCTTSSSCCC-----------------TTC------G-GGGHHHHHHHH----HHHTCCCCTTS
T ss_pred ECCCCCCCC----CCCCCCCCCCCCC-----------------CCC------H-HHHHHHHHHHH----HHCCCCCCCCC
T ss_conf 469876645----8644422212366-----------------300------6-57788499999----87198889997
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 15865554101101112335679999997501944558999959999722895898789999999998766429958899
Q 005595 414 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 493 (689)
Q Consensus 414 ~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~y~~aK~iIk~I~~~a~~in~d~~~~~ 493 (689)
++++++.|+..+|+.++ ++.++.++.+ .++++++.|.+.+.+.. .+.++++.. ++
T Consensus 293 ~~i~~vGrl~~~Kg~~~-li~a~~~l~~------------~~~~l~ivG~g~~~~~~------~l~~~~~~~------~~ 347 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDL-VLEALPGLLE------------QGGQLALLGAGDPVLQE------GFLAAAAEY------PG 347 (485)
T ss_dssp CEEEEEEEESGGGCHHH-HHHHHHHHHH------------TTCEEEEEEEECHHHHH------HHHHHHHHS------TT
T ss_pred EEEEEECCCCCCCCHHH-HHHHHHHHHH------------CCCEEEEEECCCHHHHH------HHHHHHHHC------CC
T ss_conf 39999666754358799-9999999862------------79489999289567899------999999757------99
Q ss_pred CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHC-------CCCEEEE
Q ss_conf 235999838897789732357631123687775678821237761385276614761589999833-------8526650
Q 005595 494 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG-------EENFFLF 566 (689)
Q Consensus 494 ~lkVvflenY~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~~~~~G-------g~n~~~f 566 (689)
+|.|+.++.......++++||++++||+ +|++|++-+-||..|.+.|++..|+..|+++... +++|++|
T Consensus 348 --~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 348 --QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp --TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE
T ss_pred --CEEEECCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEEEE
T ss_conf --3899478997999999975889997885--678767999999779977987899832552157644344466645997
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 46543104455202689999992579999888419889999488999872088999886332059937799999999998
Q 005595 567 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 646 (689)
Q Consensus 567 G~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~~Y~~~q~~~~~~ 646 (689)
.+.+.++|.++|. ++...
T Consensus 424 -------------------------------------~~~d~~~la~~i~-------------------------~ll~~ 441 (485)
T 2qzs_A 424 -------------------------------------EDSNAWSLLRAIR-------------------------RAFVL 441 (485)
T ss_dssp -------------------------------------CSSSHHHHHHHHH-------------------------HHHHH
T ss_pred -------------------------------------CCCCHHHHHHHHH-------------------------HHHHH
T ss_conf -------------------------------------7899999999999-------------------------99987
Q ss_pred HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 109889999999972168999968999999999725
Q 005595 647 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWN 682 (689)
Q Consensus 647 Y~d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~ 682 (689)
|.|++.+.+|..++... .|||++++++|.+-.-.
T Consensus 442 ~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 442 WSRPSLWRFVQRQAMAM--DFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HTSHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHH
T ss_conf 08999999999998763--28989999999999998
No 9
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=147.42 Aligned_cols=332 Identities=13% Similarity=0.077 Sum_probs=210.1
Q ss_pred CCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHCHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99818985996311209999999997509995788430275089750687145663411999997624679999999999
Q 005595 180 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 259 (689)
Q Consensus 180 ~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~ 259 (689)
.+||+||.|.|.++++. .+++.. ....+|+|.|++.+.....-.. .... ++..
T Consensus 406 ~~PDVIHsH~~~sglva-~llar~--------------~gvP~V~T~Hsl~~~k~~~~~~-~~~~-----------~~~~ 458 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVA-SLLAHK--------------LGVTQCTIAHALEKTKYPDSDI-YWKK-----------LDDK 458 (816)
T ss_dssp SCCSEEEEEHHHHHHHH-HHHHHH--------------HTCCEEEECSCCHHHHSTTTTT-THHH-----------HHHH
T ss_pred CCCEEEEECCCHHHHHH-HHHHHH--------------CCCCEEEEEECCCCCCCCCCCC-HHHH-----------HHHH
T ss_conf 99739996885389999-999997--------------5998899981663001222330-1556-----------7788
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHHHHHHHHHHHHHCCHH----------------
Q ss_conf 9999997469982100113532479999921050101120796024123559998742102711----------------
Q 005595 260 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYV---------------- 323 (689)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~~h~ei~~~~~~~~~~---------------- 323 (689)
+ . + . .++..-..++..|+.|.++|+...+.+++ ..+.+.
T Consensus 459 y--------~-----~---~--------~r~~aE~~~l~~AD~VIa~S~~~~~~l~~-~~~~y~~~~~~~~p~Lyr~~~g 513 (816)
T 3s28_A 459 Y--------H-----F---S--------CQFTADIFAMNHTDFIITSTFQEIAGSKE-TVGQYESHTAFTLPGLYRVVHG 513 (816)
T ss_dssp H--------C-----H---H--------HHHHHHHHHHHHSSEEEESCHHHHHCCSS-SCCTTGGGSSEEETTTEEEEES
T ss_pred H--------H-----H---H--------HHHHHHHHHHHHCCEEEECCHHHHHHHHH-HHHHHHHHHCCCCCHHHHCCCC
T ss_conf 8--------8-----9---8--------88889999998499999888999999998-8877644201354112210122
Q ss_pred -HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -1157887631246785453455790025899974186510146025763200489978999999999999999999999
Q 005595 324 -SLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIW 402 (689)
Q Consensus 324 -~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~~K~~L~~~i~ 402 (689)
+.++.++.-|-||||...+ .|..... ..+. .+.... .....++.. .+
T Consensus 514 I~~~~~ki~VIpnGVD~~~F----~P~~~~~--~Rl~---------------------~~~~~i-~~~l~~p~~----~r 561 (816)
T 3s28_A 514 IDVFDPKFNIVSPGADMSIY----FPYTEEK--RRLT---------------------KFHSEI-EELLYSDVE----NK 561 (816)
T ss_dssp CCTTCTTEEECCCCCCTTTS----CCTTCTT--TCCG---------------------GGHHHH-HHHHHCSCC----BT
T ss_pred CCCCCCCEEEECCCCCHHHC----CCCCHHH--HHHH---------------------HCCCCC-CCCCCCHHH----HH
T ss_conf 44677887998897478872----8631035--5432---------------------002320-001246056----77
Q ss_pred HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC---CCHHHHHHHHHHH
Q ss_conf 9949967999815865554101101112335679999997501944558999959999722895---8987899999999
Q 005595 403 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVN 479 (689)
Q Consensus 403 ~~~g~~~~~~~~~~~~vrR~~eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P---~y~~aK~iIk~I~ 479 (689)
+..|+..+++.++++++.|+..+|+.++ ++.++.++.+.. .++++++.|.+.+ .+...++....+.
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~----------~~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR----------ELANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH----------HHCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCEEEEEECCCCCCCCHHH-HHHHHHHHHHHC----------CCEEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 7744457899839999744722179999-999999978557----------99699999688753334335699999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEECCC-----CHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHH
Q ss_conf 987664299588992359998388-----977897323576311236877756788212377613852766147615899
Q 005595 480 DVGEVVNTDPEVNSYLKVVFVPNY-----NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 554 (689)
Q Consensus 480 ~~a~~in~d~~~~~~lkVvflenY-----~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~istlDG~~vE~ 554 (689)
++++.. ...+ +|.|+.-- ..++.+.+..++|++++||+ +|++|++-+-||..|.+.|++..|+..|+
T Consensus 631 ~li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~Ei 702 (816)
T 3s28_A 631 DLIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEI 702 (816)
T ss_dssp HHHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHH
T ss_pred HHHHHC----CCCC--CEEECCCCCCCCCHHHHHHHHHHCCEEEEECCC--CCCCCHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 999974----9987--289816755668999999999956909998887--55764999999980999999689876999
Q ss_pred HHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 99833852665046543104455202689999992579999888419889999488999872088999886332059937
Q 005595 555 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 634 (689)
Q Consensus 555 ~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~~~v~~Df~ 634 (689)
+.. ++||++|. +.+.+++.++|.
T Consensus 703 V~d--g~~Gllv~-------------------------------------p~D~e~LA~aI~------------------ 725 (816)
T 3s28_A 703 IVH--GKSGFHID-------------------------------------PYHGDQAADTLA------------------ 725 (816)
T ss_dssp CCB--TTTBEEEC-------------------------------------TTSHHHHHHHHH------------------
T ss_pred HCC--CCCEEEEC-------------------------------------CCCHHHHHHHHH------------------
T ss_conf 706--98189968-------------------------------------999999999999------------------
Q ss_pred HHHHHHHHHH-HHHCCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHH
Q ss_conf 7999999999-98109889999999972168-99996899999999
Q 005595 635 SYLEAQDRVD-QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 678 (689)
Q Consensus 635 ~Y~~~q~~~~-~~Y~d~~~W~~~~~~~ia~~-g~FS~drti~eY~~ 678 (689)
++. .++.|++.|.+|..++...+ ..|||++++++|.+
T Consensus 726 -------~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 726 -------DFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764 (816)
T ss_dssp -------HHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred -------HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf -------999875269999999999999999986899999999999
No 10
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=138.90 Aligned_cols=329 Identities=17% Similarity=0.144 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECC
Q ss_conf 10222556725999999999804663333489981898599631120999999999750999578843027508975068
Q 005595 149 LKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHT 228 (689)
Q Consensus 149 l~Qe~fl~~a~lq~iir~~~~~~g~~~~~~l~~~~viHlND~H~al~i~ellR~~~~~~~l~~~~a~~~~~~~~vfT~HT 228 (689)
+.+..++..+..+. ++. . +..-.+||+||+|+++++++ +.+++.. .+..+++|.|+
T Consensus 99 ~~~~~~~~~~~~~~-~~~---~-----~~~~~~~Dii~~~~~~~~~~-~~~~~~~--------------~~~~~v~~~h~ 154 (439)
T 3fro_A 99 IRKAVTFGRASVLL-LND---L-----LREEPLPDVVHFHDWHTVFA-GALIKKY--------------FKIPAVFTIHR 154 (439)
T ss_dssp HHHHHHHHHHHHHH-HHH---H-----TTTSCCCSEEEEESGGGHHH-HHHHHHH--------------HCCCEEEEESC
T ss_pred HHHHHHHHHHHHHH-HHH---H-----HCCCCCCEEEEECCHHHHHH-HHHHHHC--------------CCCCEEEEECC
T ss_conf 23257899999999-999---7-----44479981999464034345-8988652--------------69978999653
Q ss_pred CHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCEEEEHH
Q ss_conf 71456634119999976246799999999999999997469982100113532479999921050101120796024123
Q 005595 229 VLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQ 308 (689)
Q Consensus 229 ~~~~g~e~f~~~l~~~~lp~~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~iie~~~~~~~vnm~~lai~~S~~vNgVS~ 308 (689)
..+.+. +...+... . +.... ......+...++..++.+.+||+
T Consensus 155 ~~~~~~---~~~~~~~~-----------------------~-----~~~~~------~~~~~~~~~~~~~~ad~ii~~S~ 197 (439)
T 3fro_A 155 LNKSKL---PAFYFHEA-----------------------G-----LSELA------PYPDIDPEHTGGYIADIVTTVSR 197 (439)
T ss_dssp CCCCCE---EHHHHHHT-----------------------T-----CGGGC------CSSEECHHHHHHHHCSEEEESCH
T ss_pred CCCCCC---CHHHHCCC-----------------------C-----CCCCC------CCCEEEHHHHHHHHCCEEEECCH
T ss_conf 444568---56774745-----------------------5-----10035------66632076665543458872689
Q ss_pred HHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 55999874210271111578876312467854534557900258999741865101460257632004899789999999
Q 005595 309 LHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWES 388 (689)
Q Consensus 309 ~h~ei~~~~~~~~~~~l~p~ki~~ItNGV~~~~W~~~~np~~~~li~~~~~~~~w~~~~~~l~~l~~~~~d~~~~~~~~~ 388 (689)
.+.+.... +.+..+.++.-|-|||+...| +|.. +. ..
T Consensus 198 ~~~~~~~~-----~~~~~~~~i~vi~ngvd~~~~----~~~~-------~~------------------~~--------- 234 (439)
T 3fro_A 198 GYLIDEWG-----FFRNFEGKITYVFNGIDCSFW----NESY-------LT------------------GS--------- 234 (439)
T ss_dssp HHHHHTHH-----HHGGGTTSEEECCCCCCTTTS----CGGG-------SC------------------SC---------
T ss_pred HHHHHHHH-----HHHHCCCCEEECCCCCCCHHC----CCCC-------CC------------------CH---------
T ss_conf 89999860-----565047734534788880430----8432-------21------------------10---------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 99999999999999994996799981586555410-11011123356799999975019445589999599997228958
Q 005595 389 AKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT 467 (689)
Q Consensus 389 ~K~~~K~~L~~~i~~~~g~~~~~~~~~~~~vrR~~-eyKR~~Lnil~~i~rl~~i~~~~~~~~~~~~p~q~If~GKa~P~ 467 (689)
+...+..+. +++|++ ++ +.++++.|+. .+|+.++ ++..+.++.+-.. ..++++++.|.+.+.
T Consensus 235 -~~~~~~~~~----~~~~~~--~~-~~i~~~G~~~~~~Kg~~~-li~a~~~l~~~~~--------~~~~~l~i~G~g~~~ 297 (439)
T 3fro_A 235 -RDERKKSLL----SKFGMD--EG-VTFMFIGRFDRGQKGVDV-LLKAIEILSSKKE--------FQEMRFIIIGKGDPE 297 (439)
T ss_dssp -HHHHHHHHH----HHHTCC--SC-EEEEEECCSSCTTBCHHH-HHHHHHHHHTSGG--------GGGEEEEEECCCCHH
T ss_pred -HHHHHHHHH----HHCCCC--CC-CEEEEECCCCCCCCCHHH-HHHHHHHHHHCCC--------CCCEEEEEECCCCHH
T ss_conf -456699999----973999--98-479997333534366999-9999999985466--------787189998079726
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
Q ss_conf 98789999999998766429958899235999838-89778973235763112368777567882123776138527661
Q 005595 468 YTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 546 (689)
Q Consensus 468 y~~aK~iIk~I~~~a~~in~d~~~~~~lkVvflen-Y~~~lA~~l~~g~Dv~l~~s~~~~EasGTs~Mka~~NG~l~ist 546 (689)
+.. .+.++++.. + +++++.+ .+.+-...++++||++++||+ .|++|++-+-||..|.+.|++
T Consensus 298 ~~~------~l~~~~~~~------~---~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 298 LEG------WARSLEEKH------G---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp HHH------HHHHHHHHC------T---TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEE
T ss_pred HHH------HHHHHHHHC------C---CEEEECCCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHCCCCEEEC
T ss_conf 778------999987506------9---89997287998899999997799995898--788618999999779976973
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 47615899998338526650465431044552026899999925799998884198899994889998720889998863
Q 005595 547 LDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDY 626 (689)
Q Consensus 547 lDG~~vE~~~~~Gg~n~~~fG~~~d~v~~~~~~~~y~~~~~~~~~~~~~~~~~~G~f~~~~~~~l~~~l~~~~~~~~~D~ 626 (689)
..|+..|+++. + +|+++. +.+.+++.++|.
T Consensus 361 ~~~~~~e~~~~--~-~g~~~~-------------------------------------~~d~~~la~~i~---------- 390 (439)
T 3fro_A 361 AVGGLRDIITN--E-TGILVK-------------------------------------AGDPGELANAIL---------- 390 (439)
T ss_dssp SSTHHHHHCCT--T-TCEEEC-------------------------------------TTCHHHHHHHHH----------
T ss_pred CCCCCCEEEEC--C-CEEEEC-------------------------------------CCCHHHHHHHHH----------
T ss_conf 78874316875--8-448968-------------------------------------899899999999----------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 3205993779999999999810-98899999999721689999689999999997256
Q 005595 627 FLVGYDFPSYLEAQDRVDQAYK-DQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 683 (689)
Q Consensus 627 ~~v~~Df~~Y~~~q~~~~~~Y~-d~~~W~~~~~~~ia~~g~FS~drti~eY~~~iw~~ 683 (689)
+ +.. |++.+.++..++...+..|||++.+++|.+-+-.+
T Consensus 391 ---------------~---ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 391 ---------------K---ALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp ---------------H---HHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTC
T ss_pred ---------------H---HHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf ---------------9---983199999999999999876472999999999999999
Done!