Query 005598
Match_columns 689
No_of_seqs 440 out of 2901
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 18:40:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005598.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2102-2106//hhsearch_pdb/005598hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xm9_A Plakophilin 1; armadill 1.0 1 1 250.3 24.6 278 403-682 43-451 (457)
2 3l6x_A Catenin delta-1; cateni 1.0 1 1 248.8 27.0 280 404-684 48-388 (584)
3 3nmz_A APC variant protein; pr 1.0 1 1 248.5 27.9 279 404-683 134-453 (458)
4 3nmw_A APC variant protein; AR 1.0 1 1 246.9 27.2 266 419-685 47-339 (354)
5 3now_A UNC-45 protein, SD10334 1.0 1 1 246.0 28.9 280 403-683 494-785 (810)
6 3now_A UNC-45 protein, SD10334 1.0 1 1 239.4 27.9 286 396-681 413-738 (810)
7 3ul1_B Importin subunit alpha- 1.0 1 1 239.0 27.1 277 403-679 99-429 (510)
8 3tpo_A Importin subunit alpha- 1.0 1 1 234.5 30.2 277 403-679 118-448 (529)
9 1xm9_A Plakophilin 1; armadill 1.0 1 1 233.3 26.5 279 405-684 3-364 (457)
10 3nmz_A APC variant protein; pr 1.0 1 1 232.8 24.7 281 400-680 66-408 (458)
No 1
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=1.00 E-value=1 Score=250.34 Aligned_cols=278 Identities=21% Similarity=0.269 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 559999999933999999999999999963149030899995393999999653-8999999999999999516983089
Q 005598 403 ETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLH-SSETKIQENAVTALLNLSINDNNKS 481 (689)
Q Consensus 403 ~~~I~~Li~~L~s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~-s~~~~v~e~Al~aL~nLs~~~~~k~ 481 (689)
.+.|+.|+++|+++++++|..|+++|++|+..+++++..+.+.|+||.|+.+|. +.+.++++.++++|.||+.++.++.
T Consensus 43 ~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~ 122 (457)
T 1xm9_A 43 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 122 (457)
T ss_dssp TTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 68989999987699999999999999998449877799999769899999998619988999999999999855877689
Q ss_pred HHHHCCCHHHHHHHHC--------CC--------CHHHHHHHHHHHHHCCCCCHHHHHHHHH-CCHHHHHHHHCC-----
Q ss_conf 9997189999999774--------79--------9999999999998501683258898850-875999985049-----
Q 005598 482 AIANANAIEPLIHVLQ--------TG--------SPEARENAAATLFSLSVIEDNKIKIGRS-GAIGPLVDLLGN----- 539 (689)
Q Consensus 482 ~i~~~g~i~~Li~lL~--------s~--------~~~~r~~Aa~aL~nLs~~~~~k~~I~~~-g~I~~Lv~LL~~----- 539 (689)
.+++ |+++.|+.+|. ++ +..+..+|+++|+||+..++++..+.+. |+++.|+.+|++
T Consensus 123 ~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~ 201 (457)
T 1xm9_A 123 ELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAAS 201 (457)
T ss_dssp HHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHH-CCHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf 9995-539999999824334445576301012254899999999999982699999999986897999999999623135
Q ss_pred -C------------------------------------------------------------------------------
Q ss_conf -9------------------------------------------------------------------------------
Q 005598 540 -G------------------------------------------------------------------------------ 540 (689)
Q Consensus 540 -~------------------------------------------------------------------------------ 540 (689)
.
T Consensus 202 ~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 281 (457)
T 1xm9_A 202 RCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYH 281 (457)
T ss_dssp CTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGGGGS
T ss_pred CCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 77548899999999966032210375212111134321235666654120222566624445775112557047899967
Q ss_pred ---------------CHHHHHHHHHHHHHHHHCHH-----HHHHHH-HHCCHHHHHHHC-CCCHHHHHHHHHHHHHHHCC
Q ss_conf ---------------98899999999996312307-----899999-827099999813-99947999999999998279
Q 005598 541 ---------------TPRGKKDAATALFNLSIYHE-----NKARIV-QAGAVKHLVDLM-DPAAGMVDKAVAVLANLATI 598 (689)
Q Consensus 541 ---------------~~~v~~~Al~aL~nLs~~~~-----n~~~iv-~~G~v~~Lv~LL-~~~~~i~e~Al~~L~nLa~~ 598 (689)
++.++..|+++|.||+.... ..+.++ +.|+++.|+++| +.+.+++..|+++|.||+.+
T Consensus 282 ~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~ 361 (457)
T 1xm9_A 282 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 361 (457)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 02599999998605879999999999888605767632889999998739946999987179776999999999998149
Q ss_pred CHHHHHHHHCCCHHHHHHHHCCCC------HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCC-CHHHHHHH
Q ss_conf 015999995694999999960699------99999999999999408986599999489969899925069-98999999
Q 005598 599 PDGRVAIGQENGIPVLVEVVELGS------ARGKENAAAALLQLCTNSSRFCSMVLQEGAVPPLVALSQSG-TPRAKEKA 671 (689)
Q Consensus 599 ~~~r~~i~~~g~i~~Lv~lL~s~s------~~~~e~Av~aL~~L~~~~~~~~~~iv~~g~i~~L~~LL~~~-~~~vk~~A 671 (689)
...+..+. .++++.|+++|...+ +.+...++.+|.+++..++.+...+.+.|++++|+.|+.++ +++++++|
T Consensus 362 ~~~~~~i~-~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~i~~~A 440 (457)
T 1xm9_A 362 PLLHRVMG-NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 440 (457)
T ss_dssp GGGHHHHH-HHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH
T ss_conf 77899999-75169999866587888888588999999999999863989899999769889999997379967999999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999946085
Q 005598 672 QALLSYFRNQR 682 (689)
Q Consensus 672 ~~lL~~L~~~~ 682 (689)
.++|..+-.+.
T Consensus 441 ~~~L~~~~~~~ 451 (457)
T 1xm9_A 441 RLLLSDMWSSK 451 (457)
T ss_dssp HHHHHTTSSST
T ss_pred HHHHHHHHCCH
T ss_conf 99999997105
No 2
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=1.00 E-value=1 Score=248.83 Aligned_cols=280 Identities=21% Similarity=0.256 Sum_probs=217.8
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--CCCHH
Q ss_conf 5999999993399999999999999996314903089999539399999965389999999999999995169--83089
Q 005598 404 TQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSIN--DNNKS 481 (689)
Q Consensus 404 ~~I~~Li~~L~s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~--~~~k~ 481 (689)
..++.|+.+|.+++.++|..|++.|.+|+..+..++..+.+.|+||.|+.+|.+.+..+++.|+++|.||+.+ ++++.
T Consensus 48 ~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~ 127 (584)
T 3l6x_A 48 PELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKI 127 (584)
T ss_dssp CCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 43999999977999999999999999998089599999998599079999877999899999999999987359889999
Q ss_pred HHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHC------------------CCCH
Q ss_conf 99971899999997747-9999999999999850168325889885087599998504------------------9998
Q 005598 482 AIANANAIEPLIHVLQT-GSPEARENAAATLFSLSVIEDNKIKIGRSGAIGPLVDLLG------------------NGTP 542 (689)
Q Consensus 482 ~i~~~g~i~~Li~lL~s-~~~~~r~~Aa~aL~nLs~~~~~k~~I~~~g~I~~Lv~LL~------------------~~~~ 542 (689)
.|++.|+|++|+.+|++ .+.+++++++++|++|+..++++..|+. ++++.|++++. ..+.
T Consensus 128 ~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~ 206 (584)
T 3l6x_A 128 AIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWE 206 (584)
T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCCH
T ss_pred HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 9998589999999976799999999999999998579613689986-308999999831334543343321112455549
Q ss_pred HHHHHHHHHHHHHHHCH-HHHHHHHH-HCCHHHHHHHCC-------CCHHHHHHHHHHHHHHHCCCH-------------
Q ss_conf 89999999999631230-78999998-270999998139-------994799999999999827901-------------
Q 005598 543 RGKKDAATALFNLSIYH-ENKARIVQ-AGAVKHLVDLMD-------PAAGMVDKAVAVLANLATIPD------------- 600 (689)
Q Consensus 543 ~v~~~Al~aL~nLs~~~-~n~~~iv~-~G~v~~Lv~LL~-------~~~~i~e~Al~~L~nLa~~~~------------- 600 (689)
.+++.|+++|+||+... +++..+++ .|+++.|+.++. .+...++.|+++|.||+....
T Consensus 207 ~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~ 286 (584)
T 3l6x_A 207 SVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAA 286 (584)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC-----
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC
T ss_conf 99999999999996388788999998489589999999874013674388999999999986423210145245554302
Q ss_pred -------------HHHHHHHCCCHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHHHHC
Q ss_conf -------------5999995694999999960-6999999999999999940898----659999948996989992506
Q 005598 601 -------------GRVAIGQENGIPVLVEVVE-LGSARGKENAAAALLQLCTNSS----RFCSMVLQEGAVPPLVALSQS 662 (689)
Q Consensus 601 -------------~r~~i~~~g~i~~Lv~lL~-s~s~~~~e~Av~aL~~L~~~~~----~~~~~iv~~g~i~~L~~LL~~ 662 (689)
+.+.+.+.++++.|+.+|. +.++.+++.|+++|++||.... ..+..+.++++++.|+.|+.+
T Consensus 287 ~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s 366 (584)
T 3l6x_A 287 PNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTN 366 (584)
T ss_dssp ---------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 43344531147211788816007999999971478788999999999998728864538999999983769999999848
Q ss_pred CCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9989999999999994608587
Q 005598 663 GTPRAKEKAQALLSYFRNQRHG 684 (689)
Q Consensus 663 ~~~~vk~~A~~lL~~L~~~~~~ 684 (689)
+++++++.|.++|++|......
T Consensus 367 ~~~~v~~~A~~aL~nLs~~~~~ 388 (584)
T 3l6x_A 367 EHERVVKAASGALRNLAVDARN 388 (584)
T ss_dssp SCHHHHHHHHHHHHHHHTTCSC
T ss_pred CCHHHHHHHHHHHHHHHCCHHH
T ss_conf 9879999999999998378237
No 3
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=1.00 E-value=1 Score=248.54 Aligned_cols=279 Identities=22% Similarity=0.263 Sum_probs=241.5
Q ss_pred HHHHHHHHHHCCCC--HH-----H-------HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCC-----------C
Q ss_conf 59999999933999--99-----9-------9999999999631490308999953939999996538-----------9
Q 005598 404 TQVRKLVEDLKSTS--LD-----T-------QREATAELRLLAKHNMDNRMVIANCGAINILVDMLHS-----------S 458 (689)
Q Consensus 404 ~~I~~Li~~L~s~~--~~-----~-------q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s-----------~ 458 (689)
...+.+++++.+.+ .+ + +.+|+++|.+++. ++++|..+.+.|+++.|+.+|.. .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~-~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~ 212 (458)
T 3nmz_A 134 AYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHY 212 (458)
T ss_dssp HHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 44179999997021353324677642024778999999999659-98999999988988999999865300123356789
Q ss_pred CHHHHHHHHHHHHHHHCCCC-CHHHHHHC-CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999516983-08999971-8999999977479999999999999850168--32588988508759999
Q 005598 459 ETKIQENAVTALLNLSINDN-NKSAIANA-NAIEPLIHVLQTGSPEARENAAATLFSLSVI--EDNKIKIGRSGAIGPLV 534 (689)
Q Consensus 459 ~~~v~e~Al~aL~nLs~~~~-~k~~i~~~-g~i~~Li~lL~s~~~~~r~~Aa~aL~nLs~~--~~~k~~I~~~g~I~~Lv 534 (689)
+..++++|+++|.||+.+++ ++..+... |+++.|+.+|++++.+++..|+++|.+|+.. ++++..|.+.|+++.|+
T Consensus 213 ~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV 292 (458)
T 3nmz_A 213 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 292 (458)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH
T ss_conf 99999999999999867996247899981792999999994899999999999999986479889999999869989999
Q ss_pred HHH-CCCCHHHHHHHHHHHHHHHH-CHHHHHHHH-HHCCHHHHHHHCC-CCH----HHHHHHHHHHHHHHC----CCHHH
Q ss_conf 850-49998899999999996312-307899999-8270999998139-994----799999999999827----90159
Q 005598 535 DLL-GNGTPRGKKDAATALFNLSI-YHENKARIV-QAGAVKHLVDLMD-PAA----GMVDKAVAVLANLAT----IPDGR 602 (689)
Q Consensus 535 ~LL-~~~~~~v~~~Al~aL~nLs~-~~~n~~~iv-~~G~v~~Lv~LL~-~~~----~i~e~Al~~L~nLa~----~~~~r 602 (689)
++| ++++..+++.++.+|+||+. .++++..++ ..|+++.|+.+|. ... .+++.|+++|.||+. .++++
T Consensus 293 ~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~ 372 (458)
T 3nmz_A 293 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHR 372 (458)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99855899999999999999980488778999998628499999996278973419999999999999986236998999
Q ss_pred HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 99995694999999960699999999999999994089865999994899698999250699899999999999946085
Q 005598 603 VAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCSMVLQEGAVPPLVALSQSGTPRAKEKAQALLSYFRNQR 682 (689)
Q Consensus 603 ~~i~~~g~i~~Lv~lL~s~s~~~~e~Av~aL~~L~~~~~~~~~~iv~~g~i~~L~~LL~~~~~~vk~~A~~lL~~L~~~~ 682 (689)
+.+.+.|+++.|+.+|.+++..+++.|+++|++|+..+++++..+++.|+++.|+.++.+++.++++.|+++|.+|....
T Consensus 373 ~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 373 QILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp HHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99997064999999980798578999999999997299999999998889999999980899999999999999998288
Q ss_pred C
Q ss_conf 8
Q 005598 683 H 683 (689)
Q Consensus 683 ~ 683 (689)
.
T Consensus 453 p 453 (458)
T 3nmz_A 453 P 453 (458)
T ss_dssp S
T ss_pred H
T ss_conf 7
No 4
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=1.00 E-value=1 Score=246.91 Aligned_cols=266 Identities=22% Similarity=0.274 Sum_probs=236.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCC-----------CCHHHHHHHHHHHHHHHCCCC-CHHHHHHC
Q ss_conf 999999999999631490308999953939999996538-----------999999999999999516983-08999971
Q 005598 419 DTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHS-----------SETKIQENAVTALLNLSINDN-NKSAIANA 486 (689)
Q Consensus 419 ~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s-----------~~~~v~e~Al~aL~nLs~~~~-~k~~i~~~ 486 (689)
..+..|+++|.+++.+ +++|..+.+.|+++.|+.+|.+ .+..++++|+++|.||+.++. ++..+...
T Consensus 47 ~~~~~A~~aL~nls~d-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~ 125 (354)
T 3nmw_A 47 HQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSM 125 (354)
T ss_dssp GTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCC-HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 8898999999998389-889999998688799999973511012446788999999999999999975998889999981
Q ss_pred -CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CHHHHHHHHHCCHHHHHHHH-CCCCHHHHHHHHHHHHHHHH-CHHH
Q ss_conf -8999999977479999999999999850168--32588988508759999850-49998899999999996312-3078
Q 005598 487 -NAIEPLIHVLQTGSPEARENAAATLFSLSVI--EDNKIKIGRSGAIGPLVDLL-GNGTPRGKKDAATALFNLSI-YHEN 561 (689)
Q Consensus 487 -g~i~~Li~lL~s~~~~~r~~Aa~aL~nLs~~--~~~k~~I~~~g~I~~Lv~LL-~~~~~~v~~~Al~aL~nLs~-~~~n 561 (689)
|+++.|+.+|++++.++++.|+++|.+|+.. ++++..|.+.|+++.|+++| ++++..+++.++.+|+||+. .+++
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~n 205 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTEN 205 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 79699999987799989999999999998646888899999987989999999832798999999999999987368321
Q ss_pred HHHHH-HHCCHHHHHHHCC-CCH----HHHHHHHHHHHHHHC----CCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 99999-8270999998139-994----799999999999827----9015999995694999999960699999999999
Q 005598 562 KARIV-QAGAVKHLVDLMD-PAA----GMVDKAVAVLANLAT----IPDGRVAIGQENGIPVLVEVVELGSARGKENAAA 631 (689)
Q Consensus 562 ~~~iv-~~G~v~~Lv~LL~-~~~----~i~e~Al~~L~nLa~----~~~~r~~i~~~g~i~~Lv~lL~s~s~~~~e~Av~ 631 (689)
+..++ ..|+++.|+++|. ... .+++.|+++|.||+. .+++++.+.+.|+++.|+++|.+++..+++.|++
T Consensus 206 k~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~ 285 (354)
T 3nmw_A 206 KADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACG 285 (354)
T ss_dssp HHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 17899861848999999526788632889998899999987611589899999997598999999984897688999999
Q ss_pred HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999994089865999994899698999250699899999999999946085877
Q 005598 632 ALLQLCTNSSRFCSMVLQEGAVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGN 685 (689)
Q Consensus 632 aL~~L~~~~~~~~~~iv~~g~i~~L~~LL~~~~~~vk~~A~~lL~~L~~~~~~~ 685 (689)
+|++|+..+++.+..+++.|+++.|+.++.++++++++.|.++|.+|......+
T Consensus 286 aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~~~~ 339 (354)
T 3nmw_A 286 TLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAK 339 (354)
T ss_dssp HHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 999984799889999998889999999984999899999999999998599888
No 5
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=246.04 Aligned_cols=280 Identities=18% Similarity=0.169 Sum_probs=233.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 55999999993399999999999999996314903089999539399999965389999999999999995169830899
Q 005598 403 ETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSINDNNKSA 482 (689)
Q Consensus 403 ~~~I~~Li~~L~s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~~~~k~~ 482 (689)
.+.++.|+.+|+++++.+|..|+++|.+++. +..+|..+.+.|++|.|+.+|.+.+...++.|+++|.+|+.+.+....
T Consensus 494 aGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~-d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~ 572 (810)
T 3now_A 494 EGITTALCALAKTESHNSQELIARVLNAVCG-LKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVS 572 (810)
T ss_dssp TTHHHHHHHHHTCCCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 8599999999859998999999999999858-988999999878999999997059888999999999999658985665
Q ss_pred HH---HCCCHHHHHHHHCCC-CHHHHHHHHHHHHHCCCC-CHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99---718999999977479-999999999999850168-3258898850875999985049998899999999996312
Q 005598 483 IA---NANAIEPLIHVLQTG-SPEARENAAATLFSLSVI-EDNKIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSI 557 (689)
Q Consensus 483 i~---~~g~i~~Li~lL~s~-~~~~r~~Aa~aL~nLs~~-~~~k~~I~~~g~I~~Lv~LL~~~~~~v~~~Al~aL~nLs~ 557 (689)
+. ..+++++|+.+|.++ +...+..|+++|.||+.. ++++..|.+.|+++.|+.+|.+++..+++.|+++|+||+.
T Consensus 573 ~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~ 652 (810)
T 3now_A 573 FSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM 652 (810)
T ss_dssp TTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT
T ss_pred HCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 31002315799999986789827889999999999846998999999986888999999828999999999999999967
Q ss_pred CHHHHHHHHH-HCCHHHHHHHC-CCCHHHHHHHHHHHHHHHC-CCHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 3078999998-27099999813-9994799999999999827-9015999995-69499999996069999999999999
Q 005598 558 YHENKARIVQ-AGAVKHLVDLM-DPAAGMVDKAVAVLANLAT-IPDGRVAIGQ-ENGIPVLVEVVELGSARGKENAAAAL 633 (689)
Q Consensus 558 ~~~n~~~iv~-~G~v~~Lv~LL-~~~~~i~e~Al~~L~nLa~-~~~~r~~i~~-~g~i~~Lv~lL~s~s~~~~e~Av~aL 633 (689)
.++.+..++. .|+++.|+.++ ..+..++..|+++|++|+. ++...+.+++ .|+++.|+.+|.+++..+++.|+++|
T Consensus 653 ~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL 732 (810)
T 3now_A 653 SEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVII 732 (810)
T ss_dssp SHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 95999999861680899999846999899999999999986799899999998748898999987799889999999999
Q ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHHCC---CHHHHHHHHHHHHHHHCCCC
Q ss_conf 999408986599999489969899925069---98999999999999460858
Q 005598 634 LQLCTNSSRFCSMVLQEGAVPPLVALSQSG---TPRAKEKAQALLSYFRNQRH 683 (689)
Q Consensus 634 ~~L~~~~~~~~~~iv~~g~i~~L~~LL~~~---~~~vk~~A~~lL~~L~~~~~ 683 (689)
.|++..+.+....+++.|+++.|..+++.. +.++.+.|..+|..+-.+..
T Consensus 733 ~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~ 785 (810)
T 3now_A 733 LNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRI 785 (810)
T ss_dssp HHHHTTCHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99986999999999989788999999827665767999999999999986798
No 6
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=239.41 Aligned_cols=286 Identities=16% Similarity=0.206 Sum_probs=251.7
Q ss_pred HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC-----------------------------CH---HHHH
Q ss_conf 100000155999999993399999999999999996314903-----------------------------08---9999
Q 005598 396 RADLSGIETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMD-----------------------------NR---MVIA 443 (689)
Q Consensus 396 ~~~l~~~~~~I~~Li~~L~s~~~~~q~~Al~~L~~La~~s~~-----------------------------nr---~~i~ 443 (689)
+..+....+.++.|+.+|++++..++..|++.|.+|+...+. ++ ..+.
T Consensus 413 k~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~Vv 492 (810)
T 3now_A 413 KEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLA 492 (810)
T ss_dssp HHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999820649999999679981899999999999857960212128999999876424765564331777799999999
Q ss_pred HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 53939999996538999999999999999516983089999718999999977479999999999999850168325889
Q 005598 444 NCGAINILVDMLHSSETKIQENAVTALLNLSINDNNKSAIANANAIEPLIHVLQTGSPEARENAAATLFSLSVIEDNKIK 523 (689)
Q Consensus 444 ~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~~~~k~~i~~~g~i~~Li~lL~s~~~~~r~~Aa~aL~nLs~~~~~k~~ 523 (689)
+.|++|.|+.+|.+.++.+++.|+++|.||+.+.+++..+++.|++++|+.+|.+++...+..|+++|.+|+...+....
T Consensus 493 eaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~ 572 (810)
T 3now_A 493 NEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVS 572 (810)
T ss_dssp HTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 88599999999859998999999999999858988999999878999999997059888999999999999658985665
Q ss_pred HH---HHCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHHC-HHHHHHHHHHCCHHHHHHHC-CCCHHHHHHHHHHHHHHHC
Q ss_conf 88---508759999850499-988999999999963123-07899999827099999813-9994799999999999827
Q 005598 524 IG---RSGAIGPLVDLLGNG-TPRGKKDAATALFNLSIY-HENKARIVQAGAVKHLVDLM-DPAAGMVDKAVAVLANLAT 597 (689)
Q Consensus 524 I~---~~g~I~~Lv~LL~~~-~~~v~~~Al~aL~nLs~~-~~n~~~iv~~G~v~~Lv~LL-~~~~~i~e~Al~~L~nLa~ 597 (689)
+. ..+++++|+.+|.++ +...+..|+++|.||+.. ++++..++++|+++.|+.++ +.+..+...|+++|+||+.
T Consensus 573 ~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~ 652 (810)
T 3now_A 573 FSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM 652 (810)
T ss_dssp TTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT
T ss_pred HCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 31002315799999986789827889999999999846998999999986888999999828999999999999999967
Q ss_pred CCHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9015999995-694999999960699999999999999994089865999994-89969899925069989999999999
Q 005598 598 IPDGRVAIGQ-ENGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCSMVLQ-EGAVPPLVALSQSGTPRAKEKAQALL 675 (689)
Q Consensus 598 ~~~~r~~i~~-~g~i~~Lv~lL~s~s~~~~e~Av~aL~~L~~~~~~~~~~iv~-~g~i~~L~~LL~~~~~~vk~~A~~lL 675 (689)
+++.+..+.+ .|+++.|+.++.+.+..++..|+++|.+++..++..++.+++ .|+++.|+.++.+++..+++.|.++|
T Consensus 653 ~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL 732 (810)
T 3now_A 653 SEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVII 732 (810)
T ss_dssp SHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 95999999861680899999846999899999999999986799899999998748898999987799889999999999
Q ss_pred HHHHCC
Q ss_conf 994608
Q 005598 676 SYFRNQ 681 (689)
Q Consensus 676 ~~L~~~ 681 (689)
.++...
T Consensus 733 ~NL~~~ 738 (810)
T 3now_A 733 LNMINA 738 (810)
T ss_dssp HHHHTT
T ss_pred HHHHHC
T ss_conf 999869
No 7
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=239.02 Aligned_cols=277 Identities=21% Similarity=0.264 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CCCH
Q ss_conf 559999999933-99999999999999996314903089999539399999965389999999999999995169-8308
Q 005598 403 ETQVRKLVEDLK-STSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSIN-DNNK 480 (689)
Q Consensus 403 ~~~I~~Li~~L~-s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~-~~~k 480 (689)
.+.|+.|+++|+ ++++++|..|+++|.+++..+++++..+++.|+||.|+.+|.+++..+++.|+++|+||+.+ +..+
T Consensus 99 ~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r 178 (510)
T 3ul1_B 99 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR 178 (510)
T ss_dssp TTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 88889999987789989999999999999964999999999978879999998869998999999999999971889999
Q ss_pred HHHHHCCCHHHHHHHHCCC-----------------------------------------------CHHHHHHHHHHHHH
Q ss_conf 9999718999999977479-----------------------------------------------99999999999985
Q 005598 481 SAIANANAIEPLIHVLQTG-----------------------------------------------SPEARENAAATLFS 513 (689)
Q Consensus 481 ~~i~~~g~i~~Li~lL~s~-----------------------------------------------~~~~r~~Aa~aL~n 513 (689)
..+.+.|++++|+.+|... +.+++..++++|.+
T Consensus 179 ~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~ 258 (510)
T 3ul1_B 179 DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 258 (510)
T ss_dssp HHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99998698179999997346104459999999999998753111025799997699999999816879999999999999
Q ss_pred CCCCCHH-HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHCCHHHHHHHC-CCCHHHHHHHHH
Q ss_conf 0168325-8898850875999985049998899999999996312-307899999827099999813-999479999999
Q 005598 514 LSVIEDN-KIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSI-YHENKARIVQAGAVKHLVDLM-DPAAGMVDKAVA 590 (689)
Q Consensus 514 Ls~~~~~-k~~I~~~g~I~~Lv~LL~~~~~~v~~~Al~aL~nLs~-~~~n~~~iv~~G~v~~Lv~LL-~~~~~i~e~Al~ 590 (689)
|+..... ...+...|+++.|+.+|.+.+..++..++.+|.|++. ++..+..+++.|+++.|+.+| +++..++..|++
T Consensus 259 L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~ 338 (510)
T 3ul1_B 259 LTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 338 (510)
T ss_dssp HTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHH
T ss_pred HHHCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 86021566789986365125556613887134268899998862377888888761241278888724998899999999
Q ss_pred HHHHHHC-CCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHCCCHHHHHHHHHCCCHHHH
Q ss_conf 9999827-901599999569499999996069999999999999999408-98659999948996989992506998999
Q 005598 591 VLANLAT-IPDGRVAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTN-SSRFCSMVLQEGAVPPLVALSQSGTPRAK 668 (689)
Q Consensus 591 ~L~nLa~-~~~~r~~i~~~g~i~~Lv~lL~s~s~~~~e~Av~aL~~L~~~-~~~~~~~iv~~g~i~~L~~LL~~~~~~vk 668 (689)
+|+||+. ....+..+.+.|+++.|+.++.+++..++..|+++|.|++.. +.+.+..+++.|+++.|+.++.+.++++.
T Consensus 339 aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~ 418 (510)
T 3ul1_B 339 TMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 418 (510)
T ss_dssp HHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHH
T ss_conf 99999708498999988538788999997389889999999999998706999999999979789999998669999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999946
Q 005598 669 EKAQALLSYFR 679 (689)
Q Consensus 669 ~~A~~lL~~L~ 679 (689)
..+.++|.++-
T Consensus 419 ~~~L~aL~nil 429 (510)
T 3ul1_B 419 QVILDAISNIF 429 (510)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 8
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=1.00 E-value=1 Score=234.54 Aligned_cols=277 Identities=21% Similarity=0.259 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CCCH
Q ss_conf 559999999933-99999999999999996314903089999539399999965389999999999999995169-8308
Q 005598 403 ETQVRKLVEDLK-STSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSIN-DNNK 480 (689)
Q Consensus 403 ~~~I~~Li~~L~-s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~-~~~k 480 (689)
.+.|+.|+++|+ +.++.+|..|+++|.+++..++.++..+++.|+||.|+.+|.+.+..+++.|+++|+||+.+ +.++
T Consensus 118 ~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r 197 (529)
T 3tpo_A 118 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFR 197 (529)
T ss_dssp TTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 88999999987689989999999999999974999999999988889999998769998999999999998744688999
Q ss_pred HHHHHCCCHHHHHHHHC-----------------------------------------------CCCHHHHHHHHHHHHH
Q ss_conf 99997189999999774-----------------------------------------------7999999999999985
Q 005598 481 SAIANANAIEPLIHVLQ-----------------------------------------------TGSPEARENAAATLFS 513 (689)
Q Consensus 481 ~~i~~~g~i~~Li~lL~-----------------------------------------------s~~~~~r~~Aa~aL~n 513 (689)
..+...|++++|+.+|. +++.+++..++++|.+
T Consensus 198 ~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~ 277 (529)
T 3tpo_A 198 DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 277 (529)
T ss_dssp HHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 99987387278999873244037689999999999999874132113699986489999999559968899999999998
Q ss_pred CCCCCHH-HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHCCHHHHHHHC-CCCHHHHHHHHH
Q ss_conf 0168325-8898850875999985049998899999999996312-307899999827099999813-999479999999
Q 005598 514 LSVIEDN-KIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSI-YHENKARIVQAGAVKHLVDLM-DPAAGMVDKAVA 590 (689)
Q Consensus 514 Ls~~~~~-k~~I~~~g~I~~Lv~LL~~~~~~v~~~Al~aL~nLs~-~~~n~~~iv~~G~v~~Lv~LL-~~~~~i~e~Al~ 590 (689)
++..... ...+...|+++.|+.+|.+.+..++..++.+|.|++. ++..+..++..|+++.|+.+| +++..++..|++
T Consensus 278 l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~ 357 (529)
T 3tpo_A 278 LTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 357 (529)
T ss_dssp HHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 65200056789996360288998861897047788999999997164687788760242789999980998889899999
Q ss_pred HHHHHHCC-CHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHCCCHHHHHHHHHCCCHHHH
Q ss_conf 99998279-01599999569499999996069999999999999999408-98659999948996989992506998999
Q 005598 591 VLANLATI-PDGRVAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTN-SSRFCSMVLQEGAVPPLVALSQSGTPRAK 668 (689)
Q Consensus 591 ~L~nLa~~-~~~r~~i~~~g~i~~Lv~lL~s~s~~~~e~Av~aL~~L~~~-~~~~~~~iv~~g~i~~L~~LL~~~~~~vk 668 (689)
+|+||+.+ ...+..+.+.|+++.|+.++.+++..++..|+++|.|++.. +.+.+..+++.|+++.|+.++.+.++++.
T Consensus 358 aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~ 437 (529)
T 3tpo_A 358 TMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 437 (529)
T ss_dssp HHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHH
T ss_conf 99998616388888999658379999985699999999999999999818999999999989689999998669999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999946
Q 005598 669 EKAQALLSYFR 679 (689)
Q Consensus 669 ~~A~~lL~~L~ 679 (689)
..+.++|.++-
T Consensus 438 ~~~L~aL~nil 448 (529)
T 3tpo_A 438 QVILDAISNIF 448 (529)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 9
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=1.00 E-value=1 Score=233.30 Aligned_cols=279 Identities=22% Similarity=0.262 Sum_probs=241.8
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CCCHHHH
Q ss_conf 999999993399999999999999996314903089999539399999965389999999999999995169-8308999
Q 005598 405 QVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSIN-DNNKSAI 483 (689)
Q Consensus 405 ~I~~Li~~L~s~~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I~~Li~lL~s~~~~v~e~Al~aL~nLs~~-~~~k~~i 483 (689)
.++.|+.+|+++++++|..|+..|++|+..++.++..+.+.|+||.|+.+|.+++..+++.|+++|.||+.+ ++++..+
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 88999998779998999999999999976985789999986898999998769999999999999999844987779999
Q ss_pred HHCCCHHHHHHHHC-CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH--------CCC--------CHHHHH
Q ss_conf 97189999999774-7999999999999985016832588988508759999850--------499--------988999
Q 005598 484 ANANAIEPLIHVLQ-TGSPEARENAAATLFSLSVIEDNKIKIGRSGAIGPLVDLL--------GNG--------TPRGKK 546 (689)
Q Consensus 484 ~~~g~i~~Li~lL~-s~~~~~r~~Aa~aL~nLs~~~~~k~~I~~~g~I~~Lv~LL--------~~~--------~~~v~~ 546 (689)
++.|++++|+.+|+ +++.++++.++++|+||+..++++..+.+ |+++.|+.+| ++. +..+.+
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~ 161 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 161 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHH
T ss_pred HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHH
T ss_conf 97698999999986199889999999999998558776899995-53999999982433444557630101225489999
Q ss_pred HHHHHHHHHHHCHHHHHHHHHH-CCHHHHHHHCC-------CCHHHHHHHHHHHHHHHCCC-------------------
Q ss_conf 9999999631230789999982-70999998139-------99479999999999982790-------------------
Q 005598 547 DAATALFNLSIYHENKARIVQA-GAVKHLVDLMD-------PAAGMVDKAVAVLANLATIP------------------- 599 (689)
Q Consensus 547 ~Al~aL~nLs~~~~n~~~iv~~-G~v~~Lv~LL~-------~~~~i~e~Al~~L~nLa~~~------------------- 599 (689)
.|+++|+||+..++++..+++. |+++.|+.++. .+..+++.++++|.+|+...
T Consensus 162 ~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~ 241 (457)
T 1xm9_A 162 NATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY 241 (457)
T ss_dssp HHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCCCCCC
T ss_conf 99999999826999999999868979999999996231357754889999999996603221037521211113432123
Q ss_pred --------------------------------HHHHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCCHH----
Q ss_conf --------------------------------159999956949999999606-9999999999999999408986----
Q 005598 600 --------------------------------DGRVAIGQENGIPVLVEVVEL-GSARGKENAAAALLQLCTNSSR---- 642 (689)
Q Consensus 600 --------------------------------~~r~~i~~~g~i~~Lv~lL~s-~s~~~~e~Av~aL~~L~~~~~~---- 642 (689)
.+.+.+.+.++++.|+.+|.+ .++.+++.|+++|++||..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~ 321 (457)
T 1xm9_A 242 TEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG 321 (457)
T ss_dssp ------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHH
T ss_pred CCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 56666541202225666244457751125570478999670259999999860587999999999988860576763288
Q ss_pred HHHHHH-HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 599999-489969899925069989999999999994608587
Q 005598 643 FCSMVL-QEGAVPPLVALSQSGTPRAKEKAQALLSYFRNQRHG 684 (689)
Q Consensus 643 ~~~~iv-~~g~i~~L~~LL~~~~~~vk~~A~~lL~~L~~~~~~ 684 (689)
..+.++ +.|+++.|+.++.+++.++++.|.++|.++....+.
T Consensus 322 ~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~~~ 364 (457)
T 1xm9_A 322 MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL 364 (457)
T ss_dssp HHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH
T ss_conf 9999998739946999987179776999999999998149778
No 10
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=1.00 E-value=1 Score=232.76 Aligned_cols=281 Identities=18% Similarity=0.215 Sum_probs=204.2
Q ss_pred CCHHHHHHHHHHHHCCC------------CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCH----------HHHHHHHCC
Q ss_conf 00155999999993399------------99999999999999631490308999953939----------999996538
Q 005598 400 SGIETQVRKLVEDLKST------------SLDTQREATAELRLLAKHNMDNRMVIANCGAI----------NILVDMLHS 457 (689)
Q Consensus 400 ~~~~~~I~~Li~~L~s~------------~~~~q~~Al~~L~~La~~s~~nr~~i~~~g~I----------~~Li~lL~s 457 (689)
....+.++.|+++|+.. +++.+..|+++|.+++..+++......+.+++ +.++.++.+
T Consensus 66 ~~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 145 (458)
T 3nmz_A 66 MRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEA 145 (458)
T ss_dssp HHHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99888889999998333533234466657799999999999998806950348999999999998766441799999970
Q ss_pred CC--HH-----HHH-------HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCC-----------CCHHHHHHHHHHHH
Q ss_conf 99--99-----999-------9999999951698308999971899999997747-----------99999999999998
Q 005598 458 SE--TK-----IQE-------NAVTALLNLSINDNNKSAIANANAIEPLIHVLQT-----------GSPEARENAAATLF 512 (689)
Q Consensus 458 ~~--~~-----v~e-------~Al~aL~nLs~~~~~k~~i~~~g~i~~Li~lL~s-----------~~~~~r~~Aa~aL~ 512 (689)
.. .+ +.+ +|+++|.|++.++++|..+.+.|++++|+.+|.. .+..++.+|+++|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~ 225 (458)
T 3nmz_A 146 HEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALT 225 (458)
T ss_dssp TSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 21353324677642024778999999999659989999999889889999998653001233567899999999999999
Q ss_pred HCCCCCH-HHHHHHHH-CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--HHHHHHHHHHCCHHHHHHHC-C-CCHHHHH
Q ss_conf 5016832-58898850-8759999850499988999999999963123--07899999827099999813-9-9947999
Q 005598 513 SLSVIED-NKIKIGRS-GAIGPLVDLLGNGTPRGKKDAATALFNLSIY--HENKARIVQAGAVKHLVDLM-D-PAAGMVD 586 (689)
Q Consensus 513 nLs~~~~-~k~~I~~~-g~I~~Lv~LL~~~~~~v~~~Al~aL~nLs~~--~~n~~~iv~~G~v~~Lv~LL-~-~~~~i~e 586 (689)
||+..++ ++..+... |+|+.|+.+|++++..++..|+++|.||+.. .+++..+++.|+++.|+++| . .+..+.+
T Consensus 226 nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~ 305 (458)
T 3nmz_A 226 NLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLK 305 (458)
T ss_dssp HHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHH
T ss_pred HHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
T ss_conf 98679962478999817929999999948999999999999999864798899999998699899999985589999999
Q ss_pred HHHHHHHHHHC-CCHHHHHHH-HCCCHHHHHHHHCCCCH----HHHHHHHHHHHHHHH---CCHHHHHHHHHCCCHHHHH
Q ss_conf 99999999827-901599999-56949999999606999----999999999999940---8986599999489969899
Q 005598 587 KAVAVLANLAT-IPDGRVAIG-QENGIPVLVEVVELGSA----RGKENAAAALLQLCT---NSSRFCSMVLQEGAVPPLV 657 (689)
Q Consensus 587 ~Al~~L~nLa~-~~~~r~~i~-~~g~i~~Lv~lL~s~s~----~~~e~Av~aL~~L~~---~~~~~~~~iv~~g~i~~L~ 657 (689)
.++++|+||+. +.+.+..+. ..|+++.|+.+|.+.++ .+++.|+++|.+|+. .++.+++.+.+.|+++.|+
T Consensus 306 ~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv 385 (458)
T 3nmz_A 306 SVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLL 385 (458)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
T ss_conf 99999999804887789999986284999999962789734199999999999999862369989999999706499999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf 92506998999999999999460
Q 005598 658 ALSQSGTPRAKEKAQALLSYFRN 680 (689)
Q Consensus 658 ~LL~~~~~~vk~~A~~lL~~L~~ 680 (689)
.++.+++..+++.|.++|.+|..
T Consensus 386 ~LL~~~~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 386 QHLKSHSLTIVSNACGTLWNLSA 408 (458)
T ss_dssp HHSSCSCHHHHHHHHHHHHHHHS
T ss_pred HHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 99807985789999999999972
Done!