APUM5 protein (Arabidopsis thaliana)

STRING 9.05

APUM5 protein (Arabidopsis thaliana) - STRING network view

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Your Input:
	APUM5	APUM5 (Arabidopsis Pumilio 5); RNA binding / binding; Arabidopsis Pumilio 5 (APUM5); FUNCTIONS IN- RNA binding, binding; LOCATED IN- vacuole; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Pumilio RNA-binding region (InterPro-IPR001313), Armadillo-like helical (InterPro-IPR011989), Armadillo-type fold (InterPro-IPR016024); BEST Arabidopsis thaliana protein match is- APUM6 (Arabidopsis Pumilio 6); RNA binding / binding (TAIR-AT4G25880.1); Has 3518 Blast hits to 1808 proteins in 189 species- Archae - 0; Bacteria - 5; Metazoa - 931; Fung [...] (961 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT1G16800	tRNA-splicing endonuclease positive effector-related; tRNA-splicing endonuclease positive effec [...] (1939 aa)			•	0.980
	AT4G28990	RNA-binding protein-related; RNA-binding protein-related; FUNCTIONS IN- zinc ion binding; INVOL [...] (395 aa)			•	0.966
	emb1067	emb1067 (embryo defective 1067); tRNA 2'-phosphotransferase/ transferase, transferring phosphor [...] (289 aa)			•	0.927
	ATARCA	ATARCA; nucleotide binding; Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repea [...] (327 aa)			•	0.821
	AT2G41620	nucleoporin interacting component family protein; nucleoporin interacting component family prot [...] (861 aa)		•		0.819
	AT1G52380	Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein; Ran-binding [...] (440 aa)		•		0.819
	AT1G22930	T-complex protein 11; T-complex protein 11; INVOLVED IN- biological_process unknown; EXPRESSED [...] (1131 aa)	•			0.802
	UBQ4	UBQ4; protein binding; encodes a ubiquitin polyprotein. ; Protein modifier which can be covalen [...] (382 aa)		•		0.762
	AML2	AML2 (ARABIDOPSIS-MEI2-LIKE 2); RNA binding / nucleic acid binding / nucleotide binding; A memb [...] (843 aa)	•			0.746
	IRE1A	IRE1A; endoribonuclease/ kinase; Encodes a endoribonuclease/protein kinase IRE1-like protein th [...] (841 aa)	•			0.718

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Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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