BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005611
(688 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 345 bits (884), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 199/500 (39%), Positives = 303/500 (60%), Gaps = 41/500 (8%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q ++F +SKA +++ TGV F+DVAG+DEA EE +E+V +LK PE F +G K P GVL
Sbjct: 151 QAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVL 210
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F
Sbjct: 211 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVF 270
Query: 273 IDEIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRR 331
IDEIDA+ +R GI ERE TLNQLL E+DGF+ G+I +AATNR
Sbjct: 271 IDEIDAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRV 321
Query: 332 DLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGAR 391
D+LD ALLRPGRFDR++ + P+ KGR EIL +HA K+ S+ L AK PG++GA
Sbjct: 322 DVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGAD 381
Query: 392 LAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAM 451
LA L+ EAA++ R+ + I S++D ++DR+ G + + + + ++ + A EVG A+
Sbjct: 382 LANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGKAL-VDSKTKRLIAYHEVGHAI 440
Query: 452 ISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGR 511
I LL+ ++ + ++++VPRGQ F +D+S + R Q+L R+ LGGR
Sbjct: 441 IGTLLKHHDPVQ-----KVTLVPRGQAKGLTWFTPSEDQSLI--SRSQILARIMGALGGR 493
Query: 512 AAEEVIYG-QDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRL 570
AAEEV++G + + + N L + +AR+++T + + N +GP L
Sbjct: 494 AAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSN-----------------IGP-L 535
Query: 571 DFEGSLYDDYGLTEPPVNFNLDDDIAWRTE----ELLRDMYGRTVTLLRRHHAALLKTVK 626
E D + + +DIA R + +++ + TV +++ + + K V
Sbjct: 536 SLESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVD 595
Query: 627 VLLNQKEIGREEIDFILNNY 646
+L+ ++ I +E I+ ++
Sbjct: 596 LLIEKETIDGDEFRQIVGDF 615
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 301/506 (59%), Gaps = 39/506 (7%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +SKA+ +++ +TGV F DVAG+DEA ++ E+V +LK PE F +G K P GVLL
Sbjct: 207 LQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLI 266
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+D
Sbjct: 267 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 326
Query: 275 EIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 333
EIDA+ +R GI ERE TLNQLL E+DGF+ GVI +AATNR D+
Sbjct: 327 EIDAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADI 377
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LD ALLRPGRFDR++ + P+ KGRT+ILK+HA K + V L A PG++GA LA
Sbjct: 378 LDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLA 437
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
L+ EAA++A R+ SI S ++DD++DR+ G + + G + +S A EVG A+
Sbjct: 438 NLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAVCG 496
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
L + + +++++PRGQ F DD + + + QL R+ LGGRAA
Sbjct: 497 TLTPGH-----DAVQKVTLIPRGQARGLTWFIPSDDPTLI--SKQQLFARIVGGLGGRAA 549
Query: 514 EEVIYG-QDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDF 572
EE+I+G + + +V L + LAR+++T + + + +GP
Sbjct: 550 EEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSD-----------------IGPWSLM 592
Query: 573 EGSLYDDY---GLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLL 629
+ S D + ++ L +DI ++L Y ++ ++ + A+ K V+VLL
Sbjct: 593 DSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLL 652
Query: 630 NQKEIGREEIDFILNNYPPQTPISRL 655
++ IG +E IL+ + P +R+
Sbjct: 653 EKETIGGDEFRAILSEFTEIPPENRV 678
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii
(strain 12J) GN=ftsH PE=3 SV=1
Length = 714
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 299/520 (57%), Gaps = 46/520 (8%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
++ +SKA+ + TGV F+DVAGIDEA EEL E+V +LK+P+ + ++G K P GVLL
Sbjct: 220 MEIGKSKAKVYMQKETGVTFADVAGIDEAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLV 279
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
G PG GKTL+AKA+AGEAGVPF+ M+GS+FVE+ VGVG+AR+RDLFK+A+ P +IFID
Sbjct: 280 GAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMFVGVGAARVRDLFKQAETKAPCIIFID 339
Query: 275 EIDALATRRQGIFKDTTDHLYNA--ATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
E+DAL R NA +ERE TLNQLL+E+DGFD+ KGVI +AATNR +
Sbjct: 340 ELDALGKTRA----------LNAVGGNEEREQTLNQLLVEMDGFDSNKGVIIMAATNRPE 389
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LDPALLRPGRFDR + + P+ KGR +ILK+H V ++ VDL+ A PG+ GA L
Sbjct: 390 ILDPALLRPGRFDRHVALDRPDLKGREQILKVHVKGVVLAPEVDLTKLAGRTPGFAGADL 449
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
A LV EAAL+A RK + + +D D+A+DR+ G +++ + + + A E G A++
Sbjct: 450 ANLVNEAALLAARKSKQMVEMADFDEALDRIVGGLEKKNRVMNPKEKETIAFHEAGHAIV 509
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
+ + ++SI+PRG ++ Y+ +R +LL RL VLLGGR
Sbjct: 510 AE-----HRPLADRVSKVSIIPRGVAALGYTQQTPTEDRYLL-KRSELLDRLDVLLGGRI 563
Query: 513 AEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPM---VIHGEPPPWRKKVKFVGPR 569
AE++I+G D S + N L A+ +AR+++T + + + + P P
Sbjct: 564 AEQLIFG-DVSTGAQNDLQRATDMARQMITQFGMSDQLGLATYENMPNP----------- 611
Query: 570 LDFEGSLYDDYGLTEPPVNFNLDDD---IAWRTEELLRDMYGRTVTLLRRHHAALLKTVK 626
L+ GL + N + I +LL + R L L +
Sbjct: 612 ------LFAGTGLMQRERNEYSESTAQMIDAEVRKLLAEASHRVQATLEGQRTKLDALAQ 665
Query: 627 VLLNQKEIGREEIDFILNN----YPPQTPISRLLEEENPG 662
+LL ++ + R+++D L+ PP P++ + E G
Sbjct: 666 LLLEKEVVDRQDLDMFLSAKVTPMPPPKPVANIEESTATG 705
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 272/420 (64%), Gaps = 23/420 (5%)
Query: 125 TLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV 184
L+++ +++ + + RR N Q + F +SKA +++ TGV F DVAGIDEA
Sbjct: 165 NLLVVAILIGLVVMVVRRSANAS----GQAMSFGKSKARFQMEAKTGVGFDDVAGIDEAK 220
Query: 185 EELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 244
EELQE+V +LK PE F +G K P GVLL GPPG GKTL+AKAIAGEAGVPF+ ++GSEF
Sbjct: 221 EELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEF 280
Query: 245 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERET 304
VE+ VGVG++R+RDLFK+AK N P ++FIDEIDA+ R++G+ Y ERE
Sbjct: 281 VEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVG-RQRGVG-------YGGGNDEREQ 332
Query: 305 TLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKI 364
TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFDR++ + P+ +GR IL I
Sbjct: 333 TLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAI 392
Query: 365 HASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLT 424
HA K+ + V L++ A+ PG+TGA LA ++ EAA+ R+ E+I ++++DA+DR+
Sbjct: 393 HAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVV 452
Query: 425 VGPKRRGIELGNQGQSRRAA-TEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLV 483
G G L + R A EVG A+I L + + ++++++PRGQ
Sbjct: 453 AG--MEGTPLVDSKSKRLIAYHEVGHALIGTLCPGH-----DPVEKVTLIPRGQAQGLTW 505
Query: 484 FHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD-TSRASVNYLADASWLARKILT 542
F +D+S M R Q++ R+ LLGGR AEEVI+G D + + N + ++LAR+++T
Sbjct: 506 FTPDEDQSLM--TRNQMIARIAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVT 563
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 323/562 (57%), Gaps = 46/562 (8%)
Query: 84 IIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEMLKPITLVILTMVLLIRFTLSRRP 143
+IE + + +SGE S F+ L L P L I+ + ++R +LS R
Sbjct: 86 LIEKLVSKGIKVSGERSGSSSFW--------INVLGTLIPTILFIVVWLFIMR-SLSGRN 136
Query: 144 KNFRKWDLWQGIDFSRSKAEA-RVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDK 202
Q F++S+A + G+ V F DV G +EA+EEL+E+V +LK+P F++
Sbjct: 137 N--------QAFTFTKSRATMYKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNR 188
Query: 203 MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR 262
+G + P G+LL GPPG GKTL+A+A+AGEA VPF+ ++GS+FVE+ VGVG+AR+RDLF +
Sbjct: 189 IGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQ 248
Query: 263 AKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGV 322
AK + P ++FIDEIDA+ R D ERE TLNQLL+E+DGFD+ +G+
Sbjct: 249 AKAHAPCIVFIDEIDAVGRHRGAGLGGGHD--------EREQTLNQLLVEMDGFDSKEGI 300
Query: 323 IFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAK 382
I +AATNR D+LDPALLRPGRFD+KI + P+ GR +IL+IH +++ V+L AK
Sbjct: 301 IVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAK 360
Query: 383 NLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRR 442
PG+ GA L LV EAAL+A R+G + I D ++A+DR+ GP R+ + + +
Sbjct: 361 RTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSKLISPKEKRII 420
Query: 443 AATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLH 502
A E G A++S ++ E RISI+PRG H +++ Y+ R +LL
Sbjct: 421 AYHEAGHAVVSTVV-----PNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRN-ELLD 474
Query: 503 RLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKK 562
+L LLGGRAAEEV++G TS A+ N + A+ +AR ++ + + P W K+
Sbjct: 475 KLTALLGGRAAEEVVFGDVTSGAA-NDIERATEIARNMVCQLGMSEEL----GPLAWGKE 529
Query: 563 VKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALL 622
+ V F G V +D+++ ++++ + Y R ++R++ L
Sbjct: 530 EQEV-----FLGKEITRLRNYSEEVASKIDEEV----KKIVTNCYERAKEIIRKYRKQLD 580
Query: 623 KTVKVLLNQKEIGREEIDFILN 644
V++LL ++ I +E+ IL+
Sbjct: 581 NIVEILLEKETIEGDELRRILS 602
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 296/490 (60%), Gaps = 34/490 (6%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
F +SKA+ ++ VK +VAG+DE EE+ E++ YLK+P F K+G +PP G+L G
Sbjct: 145 FGKSKAKVYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILFYGE 204
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+AKA+AGEA VPF ++GS+FVE+ VGVG+AR+RD F+ A+ N P ++FIDEI
Sbjct: 205 PGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTFETARKNAPCIVFIDEI 264
Query: 277 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 336
DA+ R I D ERE TLNQLL+E+DGFDT +G++ +AATNR D+LDP
Sbjct: 265 DAVGRSRGAINLGGND--------EREQTLNQLLVEMDGFDTSEGILIIAATNRPDILDP 316
Query: 337 ALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLV 396
ALLRPGRFDR+I I P+ KGR EILK+HA ++ VDL A+ PG+TGA L ++
Sbjct: 317 ALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGFTGADLENIL 376
Query: 397 QEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLL 456
EAAL+A RK + I D+++A+DR+ +G +RRG+ + + + + A E G A++ ++
Sbjct: 377 NEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEKEKIAVHEAGHALMGLMM 436
Query: 457 RRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEV 516
+ ++SI+PRG L +DD+ ++++ + LL R+ +L+GGR AEEV
Sbjct: 437 -----PDADPLHKVSIIPRGMALGVTTQLPIDDK-HIYD-KADLLSRIHILMGGRCAEEV 489
Query: 517 IYGQD-TSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK-FVGPRLDFEG 574
YG+D + + N L A+ LA +I+ W + + P R+ + F+G EG
Sbjct: 490 FYGKDGITTGAENDLQRATDLAYRIVATWGMSENV----GPISVRRNINPFLGGSTVTEG 545
Query: 575 SLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEI 634
S P + +D ++ ++LL Y T ++ + AL VK L+ ++ I
Sbjct: 546 S---------PDLLKEIDKEV----QKLLASAYEETKRVIAENKEALSSVVKRLIEKETI 592
Query: 635 GREEIDFILN 644
+E IL+
Sbjct: 593 DCKEFVEILS 602
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/501 (40%), Positives = 299/501 (59%), Gaps = 43/501 (8%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q + F +SKA +++ TGV F+DVAG++EA EE QE+V +LK PE F +G K P GVL
Sbjct: 151 QAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVL 210
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F
Sbjct: 211 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVF 270
Query: 273 IDEIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRR 331
IDEIDA+ +R G+ ERE TLNQLL E+DGF+ GVI +AATNR
Sbjct: 271 IDEIDAVGRQRGTGV---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRA 321
Query: 332 DLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGAR 391
D+LD ALLRPGRFDR++ + P+ +GR IL++HA KM V L + A+ PG++GA
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGAD 381
Query: 392 LAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAA-TEVGVA 450
LA L+ EAA++ R+ ++ S++D ++DR+ G + G L + R A EVG A
Sbjct: 382 LANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLE--GTPLIDSKSKRLIAYHEVGHA 439
Query: 451 MISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGG 510
+I LL ++ + +++++PRGQ F DD+S + R Q+L R+ LGG
Sbjct: 440 IIGSLLEHHDPVQ-----KVTLIPRGQARGLTWFTPSDDQSLI--SRSQILARIVGALGG 492
Query: 511 RAAEEVIYGQ-DTSRASVNYLADASWLARKILTIWNLE--NPMVI--HGEPPPWRKKVKF 565
RAAEE+I+G + + + N L + +AR+++T + + P+ + G P F
Sbjct: 493 RAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDP-------F 545
Query: 566 VGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTV 625
+G + GS Y D V N+D + E++ + Y +++ + + + V
Sbjct: 546 LGRGMG-GGSEYSD------EVATNIDKQV----REIVSECYKEAKKIVKDNRVVMDRLV 594
Query: 626 KVLLNQKEIGREEIDFILNNY 646
+L+ ++ I E I+ Y
Sbjct: 595 DLLIEKETIEGNEFRHIVKEY 615
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/432 (42%), Positives = 276/432 (63%), Gaps = 25/432 (5%)
Query: 123 PITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDE 182
P L IL + L R + + F +S+A G T V F DVAG++E
Sbjct: 109 PFLLFILALYFLFRQQIRMAGRG--------AFSFGKSRARLLSGGKTKVTFKDVAGVEE 160
Query: 183 AVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 242
A EE+QELV +LK+P+ F K+G + P GVL+ GPPG GKTL+AKAIAGEA VPF+ ++GS
Sbjct: 161 AKEEVQELVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGEADVPFFSISGS 220
Query: 243 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQER 302
+FVE+ VGVG++R+RD+F++A+ + P ++FIDEIDA+ R D ER
Sbjct: 221 DFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAVGRARGTGLGGGHD--------ER 272
Query: 303 ETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEIL 362
E TLN LL+E+DG ++ +GVI +AATNR+D+LDPALLRPGRFDR++R+ P+ +GR +IL
Sbjct: 273 EQTLNALLVEMDGIESQEGVIVIAATNRKDVLDPALLRPGRFDREVRVNLPDIRGREQIL 332
Query: 363 KIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDR 422
++HA K+K+S + DLS+ A+ PG++GA LA L+ EAAL+A +KG +++ D+++A D+
Sbjct: 333 RVHAQKIKLSKNADLSALARGTPGFSGAELANLINEAALIAAKKGKDNVDQPDLEEARDK 392
Query: 423 LTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQL 482
+ G +RR + + + + A E G A+++ LL EN + +++I+PRG L
Sbjct: 393 VRWGKERRSLAMSEEERKTTAYHEAGHAVLNVLL---EN--TDPIHKVTIIPRGPALGVT 447
Query: 483 VFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILT 542
+ D+ R+ ++L L V +GGR AEEV G +S AS + + A+W ARK++
Sbjct: 448 MMLPASDKYNA--RKKEVLDDLCVAMGGRVAEEVFLGDISSGASGD-IRQATWYARKMVC 504
Query: 543 IWNLENPM-VIH 553
W + + ++H
Sbjct: 505 EWGMSEKLGMVH 516
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 257/391 (65%), Gaps = 16/391 (4%)
Query: 156 DFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEG 215
DF +S+A V F+DVAG DEAV+EL E+ +L+NP+ F K+G + P G LL G
Sbjct: 170 DFGKSRARRMTKDQPKVTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVG 229
Query: 216 PPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDE 275
PPG GKTL+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P +IF+DE
Sbjct: 230 PPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDE 289
Query: 276 IDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLD 335
IDA+ +R D ERE TLNQLL+E+DGFD+ G+I LAATNR D+LD
Sbjct: 290 IDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILD 341
Query: 336 PALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQL 395
PALLRPGRFDR+I + P+ GR +ILK+H + + VD+ + A+ PG+TGA LA L
Sbjct: 342 PALLRPGRFDRQIVVDRPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGFTGADLANL 401
Query: 396 VQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHL 455
V EAAL+A R E I ++M++A+DR+ GP+R+ + + + A E G A++ L
Sbjct: 402 VNEAALLAARHNKEQIEMAEMEEAIDRVIAGPERKTRLISEKEKEITAYHEAGHAIVGAL 461
Query: 456 LRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEE 515
L + + +++I+PRGQ L V L +E R QL+ +L +LGGRAAE
Sbjct: 462 L-----PEADPVHKVTIIPRGQALG--VTMSLPEEDRFMMSRAQLMAQLSYMLGGRAAER 514
Query: 516 VIYGQDTSRASVNYLADASWLARKILTIWNL 546
V++ + T+ AS N + A+ +AR+++T + +
Sbjct: 515 VVFEEITTGAS-NDIERATKVARQMVTRYGM 544
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 295/495 (59%), Gaps = 30/495 (6%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q ++F +S+A +++ T + F+DVAGID+A EL E+V +LKN E F +G K P GVL
Sbjct: 147 QALNFGKSRARVQMEPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVL 206
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+A+A+AGEAGVPF+ ++GSEFVE+ VGVG++R+RDLF++AK N P ++F
Sbjct: 207 LVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVF 266
Query: 273 IDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
IDEIDA+ +R D ERE TLNQLL E+DGF+ G+I +AATNR D
Sbjct: 267 IDEIDAVGRQRGAGLGGGND--------EREQTLNQLLTEMDGFEGNSGIIVIAATNRPD 318
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LD ALLRPGRFDR++ + P+ +GR EILK+HA +S VDL A+ PG+TGA L
Sbjct: 319 VLDAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADL 378
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
A L+ EAA++A R+ I +++DAVDR+ GP+++ + + + A E G A++
Sbjct: 379 ANLLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALV 438
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
LL Y + +++I+PRGQ L + D+ R L + + V LGGR
Sbjct: 439 GSLLPNY-----DPIQKVTIIPRGQA-GGLTWFMPSDDDMGLTTRAHLKNMMTVALGGRV 492
Query: 513 AEEVIYGQ-DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK-FVGPRL 570
AEEV+YG+ + + + + L + +AR ++T + + + + G R+ F+G +
Sbjct: 493 AEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRL---GNVALGRQYANIFLGREI 549
Query: 571 DFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLN 630
E ++ +D+++ L+ + Y R L+R + A L + + L+
Sbjct: 550 AAERDFSEETAAL-------IDEEV----RRLVNEAYQRATYLIRENRALLDRIARRLVE 598
Query: 631 QKEIGREEIDFILNN 645
+ I EE+ I++N
Sbjct: 599 AETIDGEELQAIIDN 613
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/503 (39%), Positives = 301/503 (59%), Gaps = 33/503 (6%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ +SKA+ +++ +TGV F DVAG+DEA ++ E+V +LK PE F +G + P GVLL
Sbjct: 200 LQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 259
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+D
Sbjct: 260 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 319
Query: 275 EIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 333
EIDA+ +R GI ERE TLNQLL E+DGF+ GVI +AATNR D+
Sbjct: 320 EIDAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADI 370
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LD ALLRPGRFDR++ + P+ KGRT+ILK+H+ K V L A PG++GA LA
Sbjct: 371 LDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLA 430
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
L+ EAA++A R+G +I S ++DD++DR+ G + + G + +S A EVG A+
Sbjct: 431 NLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAICG 489
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
L + + +++++PRGQ F DD + + + QL R+ LGGRAA
Sbjct: 490 TLTPGH-----DAVQKVTLIPRGQARGLTWFIPSDDPTLI--SKQQLFARIVGGLGGRAA 542
Query: 514 EEVIYGQ-DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDF 572
EEVI+G+ + + +V+ L + LA++++T + + E PW + + D
Sbjct: 543 EEVIFGESEVTTGAVSDLQQITGLAKQMVTTFGMS-------EIGPW--SLMDSSEQSDV 593
Query: 573 EGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQK 632
+ ++E N D D A +T L Y ++ +R + A+ K V++LL ++
Sbjct: 594 IMRMMARNSMSEKLAN---DIDTAVKT--LSDKAYEIALSQIRNNREAMDKIVEILLEKE 648
Query: 633 EIGREEIDFILNNYPPQTPISRL 655
+ +E IL+ + P +R+
Sbjct: 649 TMSGDEFRAILSEFTEIPPENRV 671
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 200/502 (39%), Positives = 297/502 (59%), Gaps = 41/502 (8%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +S+A D V F DVAGIDE EEL E+V +LK+P+ + ++G + P GVLL
Sbjct: 137 MQFGKSRARLVTDDRKRVTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLY 196
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P ++FID
Sbjct: 197 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFID 256
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R Y ERE TLNQLL+E+DGF +G+I +AATNR D+L
Sbjct: 257 EIDAVGRQRGA--------GYGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVL 308
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I I P+ KGR I ++HA + VDL AK PG+TGA +A
Sbjct: 309 DPALLRPGRFDRQIVIDRPDLKGRLAIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIAN 368
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDR-LTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
L+ EAAL+A R+ + I D++DA+DR L GP+++ + + + A E G A++
Sbjct: 369 LMNEAALLAARRRKKKISMQDVEDAIDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVG 428
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
H+L ++ +I+I+PRG+ + +F ++D + + ++L R+ + LGGRAA
Sbjct: 429 HML-----PHMDPLHKITIIPRGRAMGYTLFLPVEDRYNI--SKSEILDRMTMALGGRAA 481
Query: 514 EEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFE 573
EE+ +G+ TS A + W AR+++T W + + GP L +
Sbjct: 482 EEITFGEITSGAQDDIERTTQW-ARRMVTEWGMSEKL----------------GP-LTY- 522
Query: 574 GSLYDDYGLTEPPVNF-NLDDDIAWRTEELLRDM----YGRTVTLLRRHHAALLKTVKVL 628
G D+ L N +++A +E +R Y R + +L H AL K +VL
Sbjct: 523 GMKQDEVFLARDMTRLRNYSEEVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVL 582
Query: 629 LNQKEI-GREEIDFILNNYPPQ 649
L ++ + G+E D + PP+
Sbjct: 583 LEKETLEGKELQDLLEQLLPPR 604
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 267/421 (63%), Gaps = 22/421 (5%)
Query: 132 VLLIR--FTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQE 189
VLLI F L RR N Q ++F +SKA ++D TGV F DVAGIDEA EELQE
Sbjct: 128 VLLIASLFFLFRRSSNM-PGGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQE 186
Query: 190 LVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 249
+V +LK PE F +G K P GVLL GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ V
Sbjct: 187 VVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 246
Query: 250 GVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQL 309
GVG++R+RDLFK+AK N P +IFIDEIDA+ +R D ERE TLNQL
Sbjct: 247 GVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGND--------EREQTLNQL 298
Query: 310 LIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKV 369
L E+DGF+ G+I +AATNR D+LD AL+RPGRFDR++ + AP+ GR EIL++HA
Sbjct: 299 LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNK 358
Query: 370 KMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKR 429
K++ V + S A+ PG++GA LA L+ EAA++ R+ +I ++DDAVDR+ G +
Sbjct: 359 KLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGME- 417
Query: 430 RGIELGNQGQSRRAA-TEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLD 488
G L + R A EVG A++ LL+ ++ + +++++PRGQ F
Sbjct: 418 -GTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQ-----KVTLIPRGQAQGLTWFT--P 469
Query: 489 DESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD-TSRASVNYLADASWLARKILTIWNLE 547
+E + QL+ R+ +GGRAAEE ++G D + + L + +AR+++T + +
Sbjct: 470 NEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMS 529
Query: 548 N 548
N
Sbjct: 530 N 530
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 298/502 (59%), Gaps = 45/502 (8%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q + F +SKA +++ TGV F+DVAG++EA EE QE+V +LK PE F +G K P GVL
Sbjct: 151 QAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVL 210
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+AKAIAGEA VPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F
Sbjct: 211 LVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVF 270
Query: 273 IDEIDALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRR 331
IDEIDA+ +R G+ ERE TLNQLL E+DGF+ GVI +AATNR
Sbjct: 271 IDEIDAVGRQRGTGV---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRA 321
Query: 332 DLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGAR 391
D+LD ALLRPGRFDR++ + P+ KGR IL++HA KM V L + A+ PG++GA
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGAD 381
Query: 392 LAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAA-TEVGVA 450
LA L+ EAA++ R+ ++ S++D ++DR+ G G L + R A EVG A
Sbjct: 382 LANLLNEAAILTARRRKNAMTMSEIDTSIDRVVAG--MEGTPLIDSKSKRLIAYHEVGHA 439
Query: 451 MISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGG 510
+I LL ++ + +++++PRGQ F DD+S + R Q+L R+ LGG
Sbjct: 440 IIGSLLEHHDPVQ-----KVTLIPRGQARGLTWFTPSDDQSLI--SRSQILARIVGALGG 492
Query: 511 RAAEEVIYGQ-DTSRASVNYLADASWLARKILTIWNLE--NPMVIH---GEPPPWRKKVK 564
RAAEE+I+G + + + N L + +AR+++T + + P+ + G+P
Sbjct: 493 RAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGGDP-------- 544
Query: 565 FVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKT 624
F+G + GS Y D V N+D + E++ + Y + ++ + + +
Sbjct: 545 FLGRGMG-GGSEYSD------EVATNIDKQV----REIVSECYAQAKHIIIDNRVVIDRL 593
Query: 625 VKVLLNQKEIGREEIDFILNNY 646
V +L+ ++ I E I+ Y
Sbjct: 594 VDLLIEKETIEGNEFRDIVKEY 615
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/495 (39%), Positives = 296/495 (59%), Gaps = 38/495 (7%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
F +S+A+ +++ +TGV F DVAG+DEA ++ E+V +LK PE F +G + P GVLL GP
Sbjct: 196 FGQSRAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGP 255
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+DEI
Sbjct: 256 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 315
Query: 277 DALATRR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLD 335
DA+ +R GI ERE TLNQLL E+DGF+ G+I +AATNR D+LD
Sbjct: 316 DAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD 366
Query: 336 PALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQL 395
ALLRPGRFDR++ + P+ +GRTEILK+H S K V L A PG++GA LA L
Sbjct: 367 SALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANL 426
Query: 396 VQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHL 455
+ EAA++A R+G +I S ++DD++DR+ G + + G + +S A EVG A+ L
Sbjct: 427 LNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAICGTL 485
Query: 456 LRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEE 515
++ + +++++PRGQ F +DD + + R QL R+ LGGRAAEE
Sbjct: 486 TPGHDPVQ-----KVTLIPRGQARGLTWFIPMDDPTLI--SRQQLFARIVGGLGGRAAEE 538
Query: 516 VIYGQ-DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEG 574
+I+G+ + + + L + LA++++ + + + PW L G
Sbjct: 539 IIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSDI-------GPWS---------LMDSG 582
Query: 575 SLYDDY---GLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQ 631
+ D + ++ L +DI + L + Y ++ +R + A+ K V+VLL +
Sbjct: 583 AQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEK 642
Query: 632 KEIGREEIDFILNNY 646
+ + +E IL+ +
Sbjct: 643 ETLSGDEFRAILSEF 657
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/420 (43%), Positives = 264/420 (62%), Gaps = 21/420 (5%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q F++S+A+ G V F DVAG+DEAVEEL+E V +LK+P F K+G + P G+L
Sbjct: 140 QAFTFTKSRAQMNRPGQARVTFKDVAGVDEAVEELKETVLFLKDPGRFSKIGARMPKGIL 199
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+A+A+AGEA VPF+ ++GS+FVE+ VGVG+AR+RDLF +AK N P ++F
Sbjct: 200 LVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFNQAKANAPCIVF 259
Query: 273 IDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
IDEIDA+ R D ERE TLNQLL+E+DGFD +G++ +AATNR D
Sbjct: 260 IDEIDAVGRHRGAGLGGGHD--------EREQTLNQLLVEMDGFDVRQGIVVMAATNRPD 311
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LDPALLRPGRFD+K+ + P+ +GR EILKIHA +++ VD+ A+ G+ GA L
Sbjct: 312 ILDPALLRPGRFDKKVVLDTPDVRGREEILKIHARNKPIAEDVDIRVLAQRTTGFVGADL 371
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
LV EAAL+A R G + I D ++A+DR+ GP R+ + + + A EVG A++
Sbjct: 372 ENLVNEAALLAARNGRDKIKMEDFEEAIDRVIAGPARKSRVISPREKRIVAYHEVGHAIV 431
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
S LL + RISI+PRG ++ Y+ ++ +LL ++ LLGGRA
Sbjct: 432 SSLL-----PNADPVHRISIIPRGYRALGYTLQLPAEDRYLVTKQ-ELLDQITGLLGGRA 485
Query: 513 AEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK--FVGPRL 570
AEE+I+ Q+ + + + + A+ LAR+++ + + + + P W K + F+G L
Sbjct: 486 AEELIF-QEVTTGAASDIERATELARRMVCQFGMSDKL----GPLSWGKTEQEIFLGKEL 540
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 199/496 (40%), Positives = 289/496 (58%), Gaps = 39/496 (7%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F ++KA+ + V+FSDVAG DEAVEELQE+ +L NP + K+G K P G LL
Sbjct: 265 MSFGKAKAKKTTEERPDVRFSDVAGEDEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLV 324
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+A+A+AGEA VPF+ ++GSEFVE+ VGVG++R+R+LF++AK PS+IFID
Sbjct: 325 GPPGTGKTLLARAVAGEANVPFFSISGSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFID 384
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQLL+E+DGF+ V+ +AATNR D+L
Sbjct: 385 EIDAVGRQRGTGLGGGHD--------EREQTLNQLLVEMDGFEKNDAVVLIAATNRVDVL 436
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I + P+ KGR +IL++HA + + VDL AK G TGA L
Sbjct: 437 DPALLRPGRFDRQIVVDGPDVKGRVKILEVHAKNKPIGEDVDLERIAKLTSGMTGADLMN 496
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAAL+ R+ + I +++++++RL GP+R+ L + + A E G A++ H
Sbjct: 497 LMNEAALLTARRNKDKIGMDEVNESMERLMAGPERKTRVLNEKTRRTIAYHESGHALVGH 556
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+L ENA + +I+IVPRG L + + DE R +L L V +GGR AE
Sbjct: 557 ML---ENA--DPVHKITIVPRGMALGYTM--SIPDEDKFLVSRSAMLDELAVFMGGRVAE 609
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDF 572
E+ G T+ AS N L A+ ARK++ + + + G+P +
Sbjct: 610 EIFCGDITTGAS-NDLERATKTARKMVVSYGMSEALGQQTFGQP--------------NH 654
Query: 573 EGSLYDDYGLTE---PPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLL 629
E L DYG T+ P +D+++A L+++ + +L + KVLL
Sbjct: 655 EVFLGRDYGNTQDYSPETAQRIDEEVA----RLMKEAHDTAYEILSARQEQMHTMAKVLL 710
Query: 630 NQKEIGREEIDFILNN 645
++ + EE +LNN
Sbjct: 711 ERETVDGEECQALLNN 726
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 271/422 (64%), Gaps = 26/422 (6%)
Query: 128 ILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEEL 187
IL +V L+ L RR N Q ++F +S+A +++ TGVKF DVAGI+EA EEL
Sbjct: 157 ILPLVALMLLFL-RRSTNASS----QAMNFGKSRARFQMEAKTGVKFDDVAGIEEAKEEL 211
Query: 188 QELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 247
QE+V +LK PE F +G + P GVLL GPPG GKTL+AKAIAGEA VPF+ ++GSEFVE+
Sbjct: 212 QEVVTFLKQPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEM 271
Query: 248 LVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIFKDTTDHLYNAATQERETTL 306
VGVG++R+RDLFK+AK N P +IFIDEIDA+ +R GI ERE TL
Sbjct: 272 FVGVGASRVRDLFKKAKDNAPCLIFIDEIDAVGRQRGTGI---------GGGNDEREQTL 322
Query: 307 NQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHA 366
NQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFDR++ + AP+ KGR EIL++H+
Sbjct: 323 NQLLTEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFDRQVIVDAPDLKGRLEILQVHS 382
Query: 367 SKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVG 426
K+ SV L + A+ PG+TGA LA L+ EAA++ R+ E+I ++DDAVDR+ G
Sbjct: 383 RNKKVDPSVSLEAIARRTPGFTGADLANLLNEAAILTARRRKEAITILEIDDAVDRVVAG 442
Query: 427 PKRRGIELGNQGQSRRAA-TEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFH 485
+ G L + R A EVG ++ LL+ + + +++++PRGQ F
Sbjct: 443 ME--GTPLVDSKSKRLIAYHEVGHGLVGTLLKDH-----DPVQKVTLIPRGQAQGLTWFT 495
Query: 486 RLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTSRASVNYLADASWLARKILTIW 544
+++ + R QL R+ L GRAAEE+++G+ + + + + L + +AR+++T +
Sbjct: 496 PNEEQGLI--SRSQLKARITSTLAGRAAEEIVFGKPEVTTGAGDDLQKVTSMARQMVTKF 553
Query: 545 NL 546
+
Sbjct: 554 GM 555
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 332 bits (850), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 288/494 (58%), Gaps = 45/494 (9%)
Query: 159 RSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPG 218
+SKAE F DVAG D A EEL+E++++LKNP+ F+ +G K P GVLL GPPG
Sbjct: 172 QSKAELYDKDEEDTTFDDVAGADSAKEELREIIKFLKNPKRFEGLGGKVPKGVLLVGPPG 231
Query: 219 CGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 278
GKTL+A+A+AGEA PF+ ++GS+F+E+ VGVG++R+RD+F AK P++IFIDE+D+
Sbjct: 232 TGKTLLARAVAGEANAPFFSVSGSDFMEMFVGVGASRVRDMFSEAKETSPAIIFIDELDS 291
Query: 279 LATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPAL 338
+ +R D ERE TLNQLL ELDGF+ +GVI +AATNR D+LD AL
Sbjct: 292 IGRKRGAGLGGGND--------EREQTLNQLLSELDGFEENEGVIVMAATNRPDILDSAL 343
Query: 339 LRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQE 398
RPGRFDR+I + P + R EILKIHA + +SD VDL A++ PG++GA L L+ E
Sbjct: 344 TRPGRFDRQITVDLPTKQSRHEILKIHAREKPLSDDVDLEEIARSTPGFSGADLENLLNE 403
Query: 399 AALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRR 458
AAL+A R GH++I SD++ A D++ +G KR G+ L ++ + A E G A++ +L
Sbjct: 404 AALLAGRHGHDAIQYSDIEQARDKVMMGLKRDGMVLDDEEKKLLAYHEAGHAIVGAVL-- 461
Query: 459 YENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIY 518
+ +++IVPRG+ + V +L ++ R +L RL V++GGRAAEE+I+
Sbjct: 462 ---PNADPVHKVTIVPRGKAMG--VTQQLPEKDQYLYRHDYILDRLAVIMGGRAAEELIF 516
Query: 519 GQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYD 578
TS A N L +ARK++ W + + + K + SL +
Sbjct: 517 DTATSGAE-NDLKQVRKMARKMVLDWGMGD-------------QFKHI--------SLGE 554
Query: 579 DYGLT----EPPVNFNLDDDIAWRTEELLR----DMYGRTVTLLRRHHAALLKTVKVLLN 630
D G E DD A +E +R D + R V L HH A + +L+
Sbjct: 555 DQGNVFLGDEIAKGREYSDDTAREVDEEIRRISEDAFQRAVDTLNEHHEAFDQLADMLIE 614
Query: 631 QKEIGREEIDFILN 644
Q+E+ +++ ++N
Sbjct: 615 QEEVSGKDVLNLVN 628
>sp|B3DV46|FTSH1_METI4 ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH1 PE=3 SV=1
Length = 636
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/496 (41%), Positives = 300/496 (60%), Gaps = 31/496 (6%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
++ +S+A VD STGV F+DVAG DEA ELQE+V +LKNP + +G K P GVLL
Sbjct: 160 LNIGKSRARLLVDESTGVTFADVAGCDEAKYELQEVVDFLKNPSRYRALGAKIPKGVLLV 219
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEA VPF+ ++GSEFVE+ VGVG+AR+RDLF +AK P ++FID
Sbjct: 220 GPPGTGKTLLAKAVAGEAKVPFFSISGSEFVEMFVGVGAARVRDLFGQAKSKAPCIVFID 279
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
E+DA+ R++G+ + E E TLNQLL+E+DGFD +G+I LAATNR ++L
Sbjct: 280 ELDAIG-RQRGV-------RIQVGSDEHEQTLNQLLVEMDGFDPNEGIIVLAATNRPEIL 331
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
D ALLRPGRFDR++ + P+A GR IL++HA +S+++D A+ G++GA LA
Sbjct: 332 DRALLRPGRFDRQVVVDLPDANGREAILRVHARGKPLSENIDFKEIAQATMGFSGADLAN 391
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAAL+A R+ I D+ +A++++ GP+R+ L + + R A EVG A+++
Sbjct: 392 LLNEAALLAARRKSSRIEQVDLLEAMEKVIAGPERKSRVLSEKERERVAYHEVGHALVA- 450
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+ + E +ISIVPRG++ + Y+ + +LL R+ V +GGRAAE
Sbjct: 451 ----FYSEHAEPVRKISIVPRGKSALGYTLQLPTAQKYLLSKS-ELLDRICVAMGGRAAE 505
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNL-ENPMVIHGEPPPWRKKVKFVGPRLDFE 573
E+IYG D + + N L A+ +AR+++ ++ + E + H PP P L
Sbjct: 506 ELIYG-DITTGAENDLEVATTIARQMVCLYGMGEKSGLAHYVPP---------QPLL--- 552
Query: 574 GSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKE 633
G L Y L E + I E++L + Y R +++LR HH L + K LL ++
Sbjct: 553 GGLDTSY-LKE--CSDETARIIDLEIEKILEENYQRALSILRHHHVELKEVTKYLLQKET 609
Query: 634 IGREEIDFILNNYPPQ 649
+ EE IL N Q
Sbjct: 610 LNAEEFKSILENLKEQ 625
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 318/586 (54%), Gaps = 44/586 (7%)
Query: 62 TVYVVWPIARPFVNIFRGLILGIIENISDYIVDLSGEGGILSKFYEFYTFGGLSASLEM- 120
T VV + F + G I+ N D + GI YE GG SL +
Sbjct: 59 TSEVVGEMKPEFEKKYNGTHFSIVGNTQDEGYKFLQQHGITPN-YERADNGGFFQSLLVN 117
Query: 121 LKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGI 180
P+ L++ + ++R + K + F +S+A + V F +VAG+
Sbjct: 118 WLPLILIVAMFLFIMRQIQAGGGK---------AMSFGKSRARLLTEHKNRVTFKEVAGV 168
Query: 181 DEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMA 240
DEA E+LQE+V +LK+P+ + K+G + P GVLL G PG GKTL+A+A+AGEAGVPF+ ++
Sbjct: 169 DEAKEDLQEIVSFLKDPKKYTKLGGRIPKGVLLVGSPGTGKTLLARAVAGEAGVPFFTIS 228
Query: 241 GSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQ 300
GS+FVE+ VGVG++R+RDLF++ K N P +IFIDEIDA+ R D
Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQGKKNAPCLIFIDEIDAVGRHRGAGMGGGHD-------- 280
Query: 301 ERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTE 360
ERE TLNQLL+E+DGF++ +GVI +AATNR D+LDPALLRPGRFDR++ + P+ KGR +
Sbjct: 281 EREQTLNQLLVEMDGFESSEGVIMIAATNRPDVLDPALLRPGRFDRRVIVNKPDLKGREQ 340
Query: 361 ILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAV 420
IL +H K + VD S A+ PG++GA L LV EAALVA R + + D + A
Sbjct: 341 ILAVHMRKTPLGPDVDASKIARGTPGFSGADLENLVNEAALVAARSDKKYLEMEDFEKAK 400
Query: 421 DRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLS 480
D++T+G +RR + + ++ + A E G ++ L ++ +++I+PRG L
Sbjct: 401 DKVTMGAERRSMVISDEDKKVTAYHEAGHTLVGKKL-----VGLDPIHKVTIIPRGMALG 455
Query: 481 QLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKI 540
V L ++ + + + + + L GGRAAEE+I+ +D + + N + A+ +AR++
Sbjct: 456 --VTQTLPEKESVSLSKSKAENMIAFLFGGRAAEELIF-KDITTGAGNDIERATEIARRM 512
Query: 541 LTIWNLEN--PMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWR 598
+ W + P+ P F+G + Y D E I
Sbjct: 513 VCEWGMSKLGPLAYETRDNPV-----FMGMGYGNKSKEYSDAKAQE----------IDTE 557
Query: 599 TEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 644
E++++ Y ++ +LR H AL + + LL + I E+D ++N
Sbjct: 558 VEKIIKHGYDISIQILRDHQDALERLTQALLEYETIDGHEVDMLVN 603
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 299/490 (61%), Gaps = 30/490 (6%)
Query: 154 GIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLL 213
G+ SR+K + ST V F DVAGI+EA +EL E+V +LKNP+ + ++G P GVLL
Sbjct: 177 GLGKSRAKRYNATE-STRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLL 235
Query: 214 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 273
GPPG GKTL+A+A+AGEAGVPF+ M+GSEFVE++VGVG+AR+R+LF++AK P +IF+
Sbjct: 236 IGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFV 295
Query: 274 DEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 333
DE+DA+ RR+G + H ERE TLNQLL+E+DGFD+ +GVI LAATNR D+
Sbjct: 296 DELDAIG-RRRGSSINVGGH------DEREQTLNQLLVEMDGFDSRQGVIVLAATNRPDV 348
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LDPALLRPGRFDR++ ++ P+ GR +IL++H V + ++DLS A PG GA L
Sbjct: 349 LDPALLRPGRFDRRVVVQRPDKVGRLKILQVHTRNVPLDPNLDLSEIAAATPGLVGADLR 408
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
LV EAAL+A R+G + D DA++++T+G +R+ + + + + R A E G A++
Sbjct: 409 NLVNEAALLAARRGKNYVDREDFFDALEKITLGAERK-LLISEEDRRRVAYHESGHALLG 467
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
LL + + +++I+PRGQ L + + +D+ Y + R L R+ LGGRAA
Sbjct: 468 LLL-----PEADPVHKVTIIPRGQALG-VTYQTPEDDRYNYTER-YLRSRITAALGGRAA 520
Query: 514 EEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFE 573
EE+++G T+ A N L + +AR+++T W + + + P ++ F+GP
Sbjct: 521 EELVFGTVTTGAE-NDLKQVTEIARQMVTRWGMSKEVGLVYLSPDGQE--DFLGPN---- 573
Query: 574 GSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKE 633
+T + +L I T ++ + Y ++LL R L + LL ++
Sbjct: 574 -------PITSREYSESLATVIDRETRRIIDECYAEALSLLNRERQRLDNLAEALLREES 626
Query: 634 IGREEIDFIL 643
+ ++I I+
Sbjct: 627 LDEQQIREIV 636
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 273/435 (62%), Gaps = 30/435 (6%)
Query: 123 PITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDE 182
P+ L+IL ++R +S K Q + F ++KA+ V S + F DVAG DE
Sbjct: 113 PVVLLILFCFWMMR-GMSMGNK--------QAMSFGKTKAKLAVGASKKITFKDVAGCDE 163
Query: 183 AVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 242
A EELQEL+ +LK+P F K+G K P GVLL G PG GKTL+AKA+AGEA VPF+ +GS
Sbjct: 164 AKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAVAGEANVPFFSSSGS 223
Query: 243 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIFKDTTDHLYNAATQE 301
EFVE+ VGVG++R+RDLF + + P ++FIDEIDA+ R GI E
Sbjct: 224 EFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAVGRHRFAGI---------GGGHDE 274
Query: 302 RETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEI 361
RE TLNQLL+E+DGFD+ +GVI +AATNR D+LDPALLRPGRFDR++ I +P+ K R EI
Sbjct: 275 REQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDRQVIILSPDLKDREEI 334
Query: 362 LKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVD 421
L +H+ K+++ + V+L+ A+ PG+ GA LA LV EAAL+A R ++ +M++A+D
Sbjct: 335 LGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEAALLAARNSQNAVNMKNMEEAID 394
Query: 422 RLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQ 481
R+ GP+R+ + ++ ++ A E G +++ L + ++SI+PRG L
Sbjct: 395 RILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFL-----PSADPVHKVSIIPRGPALGY 449
Query: 482 LVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKIL 541
+ +L +E + +LL +L +L GGR AEE+++ + T+ A N ++ A+ +A +++
Sbjct: 450 TL--QLPEEDKYLTSKSELLDKLSILFGGRVAEELVFSEITTGAQ-NDISKATGIAMRMV 506
Query: 542 TIWNLEN---PMVIH 553
T + + + PM +
Sbjct: 507 TEFGMSDKIGPMALQ 521
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 309/522 (59%), Gaps = 30/522 (5%)
Query: 124 ITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEA 183
I ++ T+ LL+ F L R + + + F +S+A + V F+DVAGIDEA
Sbjct: 117 IMYLLPTVFLLVMFYLFMRQ---LQAGGGKAMSFGKSRARLLSEAQNKVTFADVAGIDEA 173
Query: 184 VEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 243
+EL+E++ +LK+P+ F K+G + P GVL+ GPPG GKTL+A+AIAGEAGVPF+ ++GS+
Sbjct: 174 KDELEEIIAFLKDPKKFQKLGGRIPKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSD 233
Query: 244 FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERE 303
FVE+ VGVG++R+RDLF++ K + P +IFIDEIDA+ R D ERE
Sbjct: 234 FVEMFVGVGASRVRDLFEQGKKHAPCIIFIDEIDAVGRHRGAGLGGGHD--------ERE 285
Query: 304 TTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILK 363
TLNQLL+E+DGF++ +GVI +AATNR D+LDPA+LRPGRFDR+I + P+ +GR IL+
Sbjct: 286 QTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPAILRPGRFDRRIVVNRPDVRGREGILR 345
Query: 364 IHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRL 423
+H KV + VD+ A+ PG+ GA + LV EAAL+A R+ + + D + A D++
Sbjct: 346 VHTKKVPLGPDVDMEILARGTPGFVGADIENLVNEAALLAARQDKDVVSMVDFEMAKDKV 405
Query: 424 TVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLV 483
+G +RR + + ++ + A E G A+++ LL ++ + +++I+PRG L +
Sbjct: 406 LMGAERRSMVISDEEKRTTAYHEAGHALVAKLLEKFSDP----VHKVTIIPRGPALG--L 459
Query: 484 FHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTI 543
+L E + R RL VL+GGR AEE+++GQ T+ A N + AS LAR+++T
Sbjct: 460 TQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFGQFTTGAG-NDIKQASNLARRMVTE 518
Query: 544 WNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELL 603
+ + + VI ++ F+G DF S DY T + +DD++ +
Sbjct: 519 FGMSD--VIGPISYGADEESVFLG--RDFT-SRRRDYSET---IANQIDDEV----RRFI 566
Query: 604 RDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNN 645
D + LL + L + LL ++ + EE+D I+
Sbjct: 567 LDAHAEARQLLTDNREILERLATALLERETLDAEEVDAIVGG 608
>sp|C8W731|FTSH_ATOPD ATP-dependent zinc metalloprotease FtsH OS=Atopobium parvulum
(strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)
GN=ftsH PE=3 SV=1
Length = 644
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 289/505 (57%), Gaps = 32/505 (6%)
Query: 159 RSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPG 218
RS A+ TG+ F DVAG +EA E +QE+V +LK P+ + ++G + P G LL GPPG
Sbjct: 168 RSSAKEIKGEDTGITFKDVAGQEEAKESMQEIVSFLKTPDKYKEIGARCPRGALLVGPPG 227
Query: 219 CGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 278
GKTL+AKA+AGEAGVPF+Q+AGSEFVE+ VG G+A++RDLFK+A P +IFIDEIDA
Sbjct: 228 TGKTLIAKAVAGEAGVPFFQIAGSEFVEMFVGRGAAKVRDLFKQANEKAPCIIFIDEIDA 287
Query: 279 LATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPAL 338
+ RR + ERE TLNQLL E+DGFD KG++ LAATNR + LD AL
Sbjct: 288 VGKRRDASLN---------SNDEREQTLNQLLSEMDGFDNHKGIVVLAATNRPETLDKAL 338
Query: 339 LRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQE 398
LRPGRFDR+I + P+ KGR +L+IHA+ VKM VDLS AK+ PG +GA LA ++ E
Sbjct: 339 LRPGRFDRRIPVELPDLKGREAVLQIHANDVKMEPGVDLSIVAKSTPGASGADLANIINE 398
Query: 399 AALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRR 458
AAL AVR G + + D+ ++VD + G K++ L + A E G A++ + +
Sbjct: 399 AALRAVRFGRRRVTTEDLTESVDVVIAGAKKKNSVLSEHEKDVVAYHETGHAIVGAIQKN 458
Query: 459 YENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIY 518
+A V +I+IVPR DDE Y+ + Q + + VL GGRAAEE+I+
Sbjct: 459 --DAPVT---KITIVPRTSGALGFTMQVEDDERYLMS-KSQAMDEIAVLCGGRAAEELIF 512
Query: 519 GQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYD 578
G+ T+ AS N + A+ +AR ++T + + + + G +++ +++G
Sbjct: 513 GEMTNGAS-NDIERATAIARAMVTQYGMSDKL---GMVTLSQQQSRYLG----------- 557
Query: 579 DYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREE 638
G + + ++I ++ + + R + L+ + L + L ++ I EE
Sbjct: 558 --GGSSLTCSEATAEEIDAEVRRIVEEGHQRALQTLKENRFKLHEIAHYLQKKETITGEE 615
Query: 639 IDFILNNYPPQTPISRLLEEENPGT 663
IL P+ + + +E T
Sbjct: 616 FMNILKRENTFAPVDKNINDEGSST 640
>sp|Q6MDI5|FTSH_PARUW ATP-dependent zinc metalloprotease FtsH OS=Protochlamydia
amoebophila (strain UWE25) GN=ftsH PE=3 SV=1
Length = 916
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 259/397 (65%), Gaps = 16/397 (4%)
Query: 154 GIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLL 213
++F +S A G + F DVAG+DEA+EELQE+V +LKNP+ F +G K P GVL
Sbjct: 403 AMNFGKSPARLLNKGDNKITFKDVAGVDEALEELQEIVEFLKNPQKFTSLGGKIPKGVLC 462
Query: 214 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 273
GPPG GKTL+AKA+AGEA PF+ ++GS+FVE+ VGVG++RIRDLF++AK P +IF+
Sbjct: 463 IGPPGTGKTLIAKAVAGEADRPFFSISGSDFVEMFVGVGASRIRDLFEQAKKAAPCIIFM 522
Query: 274 DEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 333
DEIDA+ R +G+ ERE TLNQLL+E+DGFDT +GVI +AATNR D+
Sbjct: 523 DEIDAVG-RHRGVG-------MGGGHDEREQTLNQLLVEMDGFDTNEGVILMAATNRPDV 574
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LD ALLRPGRFDR++ I P+ KGR +ILK+HA ++KM S+DL + A++ PG +GA LA
Sbjct: 575 LDKALLRPGRFDRRVIIGLPDIKGRYDILKVHARRIKMDPSIDLMAIARSTPGSSGADLA 634
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
++ E+AL+A RKG ++ + + +A D++ G +RR +E+ + A E G ++
Sbjct: 635 NILNESALLAARKGRTAVTAQETIEARDKVLYGKERRSLEIDENEKRTTAYHESGHTVVG 694
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
+++ + D+++I+PRG +L +F L ++ + + +L +L VL+GGR A
Sbjct: 695 LIVK-----SGDPVDKVTIIPRGMSLGATMF--LPKKNRVSYWKQELHDQLAVLMGGRVA 747
Query: 514 EEVIYGQDTSRASVNYLADASWLARKILTIWNLENPM 550
EE+ G D S + + A+ LAR ++ W + + +
Sbjct: 748 EEIFVG-DVSSGAQQDIERATQLARSMVCKWGMSDKL 783
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 303/513 (59%), Gaps = 33/513 (6%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +SKA+ D + V F DVAGI+EA EELQE+V++LK+P F ++G K P GVLL
Sbjct: 134 MSFGKSKAKLMSDKAAKVTFQDVAGIEEAKEELQEVVQFLKDPHKFQRLGGKIPKGVLLV 193
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+A+AIAGEA VPF+ ++GS+FVE+ VGVG+AR+RD+F++ K N P +IFID
Sbjct: 194 GPPGTGKTLLARAIAGEANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGKKNAPCIIFID 253
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ R D ERE TLNQLL+E+DGF++ +GVI +AATNR D+L
Sbjct: 254 EIDAVGRHRGAGLGGGHD--------EREQTLNQLLVEMDGFESTEGVIMVAATNRPDVL 305
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR++ + P+ GRT+ILK+H +KV +SDSVD A+ PG++GA LA
Sbjct: 306 DPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSDSVDAEVIARATPGFSGADLAN 365
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
LV EAAL+A + + D ++A D++ +G RR + + + A E G A+++
Sbjct: 366 LVNEAALIAAQLDKRVVEMEDFENAKDKVMMGKPRRSAVISEKERKTTAYHEAGHAVVAM 425
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
L + +++I+PRG+ L + L+D Y + + QL + +L+GGR AE
Sbjct: 426 ALD-----GADPVHKVTIIPRGRALGLTMQLPLEDR-YTYS-KVQLEQNIAILMGGRLAE 478
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDF 572
E++ Q T+ A N + A+ LARK++ + + + + + +GE ++ F+G +
Sbjct: 479 ELVLNQLTTGAG-NDIQRATDLARKMICSYGMSDTLGPLTYGE----NEQEIFLGREITQ 533
Query: 573 EGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQK 632
S+ ++ F++ D R +++L D L + LL ++
Sbjct: 534 HKSVSEETARRIDAEVFDIVDRNYKRAKQILTD-----------KMEVLHTMAQALLERE 582
Query: 633 EIGREEIDFILNNYPPQTPISRLLEEENPGTLP 665
I +E+ ++ P +T + L +++ P
Sbjct: 583 TIDADEVIKLMAGEPAETALKPLKKKDERANKP 615
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 290/499 (58%), Gaps = 51/499 (10%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
F +SKA D S V F DVAGIDEA EEL E+V +L+ P+ F K+G K P G LL GP
Sbjct: 139 FGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGP 198
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F++ K N P +IFIDEI
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEI 258
Query: 277 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 336
DA+ R +G+ + ERE TLNQLL+E+DGF+ +GVI +AATNR D+LDP
Sbjct: 259 DAVG-RHRGVG-------FGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDP 310
Query: 337 ALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLV 396
ALLRPGRFDR+I I P+ GR +IL++H K+ + +V++S A+ PG++GA LA LV
Sbjct: 311 ALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLV 370
Query: 397 QEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLL 456
E+AL+A R+ + + + D + A D++ +G +R+ + + + + A E G A+ S
Sbjct: 371 NESALIAARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAVTS--- 427
Query: 457 RRYENAKVECCDRI---SIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
K+E D I +I+PRG+ L ++ RL + + R ++ L V +GGRAA
Sbjct: 428 -----LKLEASDPIHKATIIPRGRALGLVM--RLPEHDRVSFTRAKMHADLIVAMGGRAA 480
Query: 514 EEVIYGQD-TSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDF 572
E+VI+G D T+ + + + A+ LAR ++T W + VGP L
Sbjct: 481 EQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMSEK----------------VGPLL-- 522
Query: 573 EGSLYDDYGLTEPPVN----FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVL 628
YG P N + + I ++L+ D +L + +L + K L
Sbjct: 523 -------YGEQNDPNNHILSIEMSNLIDSEVKQLITDALKEATKILNENIESLHRIAKAL 575
Query: 629 LNQKEIGREEIDFILNNYP 647
L + + +E+ +L P
Sbjct: 576 LEYETLTGQELSDLLEGKP 594
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/510 (38%), Positives = 292/510 (57%), Gaps = 62/510 (12%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
RSKA+ +++ +TG+ F DVAG+DEA ++ +E+V +LK PE F +G K P GVLL GP
Sbjct: 206 LGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGP 265
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+AKAIAGEAGVPF+ ++GSEF+E+ VGVG++R RDLF +AK N P ++FIDEI
Sbjct: 266 PGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEI 325
Query: 277 DALA-TRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLD 335
DA+ R GI ERE TLNQ+L E+DGF GVI +AATNR ++LD
Sbjct: 326 DAVGRMRGTGI---------GGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILD 376
Query: 336 PALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQL 395
ALLRPGRFDR++ + P+ +GR EILK+H+ K+ V LS A PG++GA LA L
Sbjct: 377 SALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANL 436
Query: 396 VQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHL 455
+ EAA++A R+G + I +++DD++DR+ G + + + + ++ A EVG A+ + L
Sbjct: 437 MNEAAILAGRRGKDKITLTEIDDSIDRIVAGMEGTKM-IDGKSKAIVAYHEVGHAICATL 495
Query: 456 LRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEE 515
++ + ++++VPRGQ F L E + QL R+ LGGRAAE+
Sbjct: 496 TEGHDPVQ-----KVTLVPRGQARGLTWF--LPGEDPTLVSKQQLFARIVGGLGGRAAED 548
Query: 516 VIYGQ-DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEG 574
VI+G+ + + + L + +AR+++T++ + E PW
Sbjct: 549 VIFGEPEITTGAAGDLQQVTEIARQMVTMFGMS-------EIGPW--------------- 586
Query: 575 SLYDDYGLTEPPVNFN---------------LDDDIAWRTEELLRDMYGRTVTLLRRHHA 619
LT+P V N L +DI ++++ D Y +R +
Sbjct: 587 ------ALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNRE 640
Query: 620 ALLKTVKVLLNQKEIGREEIDFILNNYPPQ 649
A+ K V VLL ++ + +E IL+ Y Q
Sbjct: 641 AIDKLVDVLLEKETLTGDEFRAILSEYTDQ 670
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 255/392 (65%), Gaps = 16/392 (4%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F RSKA+A V+FSDVAG +E +EL E+V +LK+P+ F K+G + P GVLLE
Sbjct: 167 MSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLE 226
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ VGVG++R+R LF+ AK P++IFID
Sbjct: 227 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ R++G+ ERE TLNQLLIE+DGF+ +G+I +AATNR D+L
Sbjct: 287 EIDAVG-RQRGVG-------LGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVL 338
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDRK+ + P+ KGR ILK+HA +++ VDL A+ PG+ GA L
Sbjct: 339 DPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLEN 398
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
++ EAALVA R+ I +SD+D+A DR+ GP ++ + + + A E G ++
Sbjct: 399 VLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGL 458
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+L NA+V +++IVPRG+ ++ L E M + + +L L+GGR AE
Sbjct: 459 VLS---NARV--VHKVTIVPRGRAGGYMI--ALPKEDQMLLSKEDMKEQLAGLMGGRVAE 511
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNL 546
E+I+ T+ AS N A+ +AR ++T + +
Sbjct: 512 EIIFNVQTTGAS-NDFEQATQMARAMVTEYGM 542
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 255/392 (65%), Gaps = 16/392 (4%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F RSKA+A V+FSDVAG +E +EL E+V +LK+P+ F K+G + P GVLLE
Sbjct: 167 MSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLE 226
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ VGVG++R+R LF+ AK P++IFID
Sbjct: 227 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ R++G+ ERE TLNQLLIE+DGF+ +G+I +AATNR D+L
Sbjct: 287 EIDAVG-RQRGVG-------LGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVL 338
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDRK+ + P+ KGR ILK+HA +++ VDL A+ PG+ GA L
Sbjct: 339 DPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLEN 398
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
++ EAALVA R+ I +SD+D+A DR+ GP ++ + + + A E G ++
Sbjct: 399 VLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGL 458
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+L NA+V +++IVPRG+ ++ L E M + + +L L+GGR AE
Sbjct: 459 VLS---NARV--VHKVTIVPRGRAGGYMI--ALPKEDQMLLSKEDMKEQLAGLMGGRVAE 511
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNL 546
E+I+ T+ AS N A+ +AR ++T + +
Sbjct: 512 EIIFNVQTTGAS-NDFEQATQMARAMVTEYGM 542
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 252/397 (63%), Gaps = 16/397 (4%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +SKA + + FSDVAG DEA EE+QELV YLK P F K+G K P G+L+
Sbjct: 132 MSFGKSKARMLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMV 191
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F+ ++ P +IFID
Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFID 251
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQ+L+E+DGFD +G+I +AATNR D+L
Sbjct: 252 EIDAVGRQRGAGLGGGHD--------EREQTLNQMLVEMDGFDGNEGIILIAATNRPDVL 303
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I + P+ +GR +I+++H KV + ++VD A+ PG++GA LA
Sbjct: 304 DPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLAN 363
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
LV EAAL A R + ++ SD + A D++T+G +RR + + + + A E G ++
Sbjct: 364 LVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGR 423
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
L+ ++ A +++I+PRG+ L F DD + + +L ++ L GGR AE
Sbjct: 424 LVPEHDPAH-----KVTIIPRGRALGVTFFLPKDD--VLSINKNKLESQISTLYGGRLAE 476
Query: 515 EVIYG-QDTSRASVNYLADASWLARKILTIWNLENPM 550
E+IYG + S + N + A+ LAR ++T W +
Sbjct: 477 EIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKL 513
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 294/493 (59%), Gaps = 32/493 (6%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
++F +SKA+ + VKF DVAG DE +EL E+V +LK+P F ++G + P GVLL
Sbjct: 141 MNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLV 200
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF+ AK N P +IFID
Sbjct: 201 GPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFID 260
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQLL+E+DGF +G+I +AATNR D+L
Sbjct: 261 EIDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFSANEGIIIIAATNRADIL 312
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I + P+ GR +LK+HA + ++V+L S A PG++GA L
Sbjct: 313 DPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLEN 372
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAALVA R+ + I + D+D+A DR+ GP ++ + + ++ A E G +I
Sbjct: 373 LLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGL 432
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+L + + +++IVPRGQ V L E F+ +P+LL ++ LLGGR AE
Sbjct: 433 VL-----DEADMVHKVTIVPRGQAGGYAVM--LPREDRYFQTKPELLDKIVGLLGGRVAE 485
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDF 572
E+I+G+ S + N A+ +AR+++T + + + + G+ + F+G +
Sbjct: 486 EIIFGE-VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQ---VFLGRDFNN 541
Query: 573 EGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQK 632
E + D + + +D +I + ++++ Y R +L + L + LL +
Sbjct: 542 EQNYSDQ-------IAYEIDQEI----QRIIKECYERAKQILTENRDKLELIAQTLLKVE 590
Query: 633 EIGREEIDFILNN 645
+ E+I ++++
Sbjct: 591 TLDAEQIKHLIDH 603
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/472 (41%), Positives = 280/472 (59%), Gaps = 35/472 (7%)
Query: 172 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 231
+ F DVAGIDEA EL+E+V++LK+P F ++G + P GVLL G PG GKTL+AKA+AGE
Sbjct: 184 ITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTGKTLLAKAVAGE 243
Query: 232 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 291
AGVPF+ M+GSEFVE+ VGVG+AR+RDLF +AK + P +IFIDE+DAL R
Sbjct: 244 AGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALGKARG--LNPIG 301
Query: 292 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 351
H ERE TLNQLL+E+DGFD GVI +AATNR ++LDPALLRPGRFDR + I
Sbjct: 302 GH------DEREQTLNQLLVEMDGFDPRSGVIIMAATNRPEILDPALLRPGRFDRHVAID 355
Query: 352 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 411
P+ +GR IL++H +VK+ VDL A PG+ GA LA LV EAALVA R+ + +
Sbjct: 356 KPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGADLANLVNEAALVAARRDRDEV 415
Query: 412 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 471
+D +A DR+ G +++ + + + A E G A+++ LL V+ +++S
Sbjct: 416 TMADFQEAADRIIGGLEKKNRAMNPKEKEIVAYHEAGHALVAMLL-----PNVDPVNKVS 470
Query: 472 IVPRGQTLSQLVF-HRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYL 530
I+PRG ++ L + +L E R +LL RLQVLLGGR +EE+I+G D S + N L
Sbjct: 471 IIPRG--IAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVSEEIIFG-DVSTGAQNDL 527
Query: 531 ADASWLARKILTIWNLE---NPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPV 587
A+ +AR ++ + + P+ +P + GS DY +
Sbjct: 528 QRATDIARSMVMEYGMSERLGPLTYTRDPRSAHLDLGL--------GSRERDYSEM---I 576
Query: 588 NFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEI 639
+D++I ++ D + + L+R L K K+LL ++ I EE+
Sbjct: 577 AQEIDEEIT----RIVEDAHEKVRATLKRERGCLEKLAKILLEKESIDGEEL 624
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 325 bits (834), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/392 (44%), Positives = 251/392 (64%), Gaps = 16/392 (4%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F ++ A+ + TG+ F DVAG DEA E L E+V +L + + ++G K P G LL
Sbjct: 146 MSFGKNNAKLYAENETGITFKDVAGQDEAKESLVEIVDFLHDTRKYVEIGAKLPKGALLV 205
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEA VPF+ M+GS+FVE+ VG+G+AR+RDLFK+A+ P ++FID
Sbjct: 206 GPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFID 265
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ R G + ERE TLNQLL E+DGFD+ KGV+ LAATNR ++L
Sbjct: 266 EIDAIGKSRDGAIQ---------GNDEREQTLNQLLTEMDGFDSSKGVVILAATNRPEVL 316
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
D ALLRPGRFDR+I + P+ GR EILK+H+ VK+SD V L AK+ PG GA LA
Sbjct: 317 DKALLRPGRFDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPGAVGADLAN 376
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
+V EAAL AV+ G + ++ D+D+AV+ + G ++R L + + A EVG A+++
Sbjct: 377 IVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQEKRDRILSPKEKKIVAYHEVGHALVAA 436
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
LL + +I+IVPR ++E Y+ + +++ ++ V+LGGRAAE
Sbjct: 437 LLNN-----TDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKE-EMIDQISVMLGGRAAE 490
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNL 546
EV++ T+ AS N + A+ AR ++TI+ +
Sbjct: 491 EVVFNSITTGAS-NDIERATQSARNMITIYGM 521
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 182/434 (41%), Positives = 268/434 (61%), Gaps = 33/434 (7%)
Query: 116 ASLEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFS 175
A L L PI LV+ + L+R + + F +SKA + + F
Sbjct: 101 AILVQLLPILLVVGVWLFLMRQM---------QGGAKGAMGFGKSKARLLTENKNRITFE 151
Query: 176 DVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 235
DVAG+DEA EELQE+V +LK+P F ++G K P G LL GPPG GKTL+A+A+AGEAGVP
Sbjct: 152 DVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAGEAGVP 211
Query: 236 FYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLY 295
F+ ++GS+FVE+ VGVG++R+RD+F++AK N P +IFIDEIDA+ R D
Sbjct: 212 FFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGND--- 268
Query: 296 NAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNA 355
ERE TLNQLL+E+DGF+ +G+I +AATNR D+LDPALLRPGRFDR++ + P+
Sbjct: 269 -----EREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDV 323
Query: 356 KGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSD 415
GR +I+++H V ++ VD+ + A+ PG++GA LA LV EAAL+A RK + D
Sbjct: 324 AGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKNRRMVTMQD 383
Query: 416 MDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCD---RISI 472
+ A D++ +G +RR + + + + A E G A+++ V D + +I
Sbjct: 384 FEQAKDKVMMGAERRSMAMNEEEKKLTAYHEGGHAIVA--------LNVPLADPVHKATI 435
Query: 473 VPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD--TSRASVNYL 530
VPRG+ L +V + + Y + + Q+ RL +++GGR AEE+I+G++ TS AS +
Sbjct: 436 VPRGRALG-MVMQLPEGDRYSMKYQ-QMTSRLAIMMGGRVAEEIIFGKENITSGASSDIK 493
Query: 531 ADASWLARKILTIW 544
A A+ LAR ++T W
Sbjct: 494 A-ATDLARNMVTRW 506
>sp|D0LWB8|FTSH_HALO1 ATP-dependent zinc metalloprotease FtsH OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=ftsH PE=3 SV=1
Length = 682
Score = 325 bits (833), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 294/498 (59%), Gaps = 37/498 (7%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
+ + F +SKA D V F DVAG++EA +E++E++ +LK+P+ F ++G + P GVL
Sbjct: 170 KAMSFGKSKARLLTDHQNKVTFKDVAGVEEAKDEVEEIIAFLKDPKKFTRLGGRIPKGVL 229
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
+ GPPG GKTL+A+AIAGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IF
Sbjct: 230 MMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIF 289
Query: 273 IDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
IDEIDA+ R D ERE TLNQLL+E+DGF++ GVI +AATNR D
Sbjct: 290 IDEIDAVGRHRGAGLGGGHD--------EREQTLNQLLVEMDGFESNDGVILIAATNRPD 341
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LDPALLRPGRFDR+I + P+ +GRT IL +H KV +S V L A+ PG++GA L
Sbjct: 342 VLDPALLRPGRFDRRIIVPRPDLRGRTGILGVHTRKVPLSTEVALEVIARGTPGFSGADL 401
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
LV EAAL+A R+ + + D +DA D++ +G +RR + + ++ + A E G A++
Sbjct: 402 ESLVNEAALIAARRDKDRVDMEDFEDAKDKVMMGAERRSMIISDKEKRTTAYHEAGHALV 461
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
+ L+ A+ + ++SI+PRG+ L V L E + R L+++ +L+GGR
Sbjct: 462 AKLV----GAETDPVHKVSIIPRGRALG--VTQLLPTEDRLGFTREFALNKIAILMGGRL 515
Query: 513 AEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDF 572
AEE++ Q T+ A + + A+ LAR+++T W + + +GP L+F
Sbjct: 516 AEELVLKQKTTGAG-DDIDKATDLARRMVTEWGMSD----------------VIGP-LNF 557
Query: 573 -EGSLYDDYGLTEPPVNFNLDDDIAWRTEELLR----DMYGRTVTLLRRHHAALLKTVKV 627
G + + + P + A R + +R D Y R +L + AL + +
Sbjct: 558 ASGGKQEVFLGRDLPQAEAYSQETAQRIDGEIRRIVTDQYERARRMLEENRDALERVARG 617
Query: 628 LLNQKEIGREEIDFILNN 645
LL + + +ID +
Sbjct: 618 LLEYETLDGNDIDTLCQG 635
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 325 bits (833), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 308/539 (57%), Gaps = 63/539 (11%)
Query: 118 LEMLKPITLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDV 177
L + P+ L I MV L R ++SR +N F RSKA V F+DV
Sbjct: 155 LATIVPLFLFIGLMVYLGR-SMSRGQQNV--------FSFGRSKARVYDAERPRVTFADV 205
Query: 178 AGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 237
AG +EA EL E+V +L+NP + +G + P G+LL GPPG GKTL+A+A+AGEAGVPF+
Sbjct: 206 AGEEEAKAELSEVVDFLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGEAGVPFF 265
Query: 238 QMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNA 297
++ SEFVE+ VGVG++R+RDLF+RAK + PS++F+DE+DA+ +R D
Sbjct: 266 SVSASEFVEMFVGVGASRVRDLFERAKASAPSIMFVDELDAVGRQRFAGLGGGND----- 320
Query: 298 ATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKG 357
ERE TLNQLL+E+DGF+ + VI +AATNR D+LDPALLRPGRFDR++ + P+ +G
Sbjct: 321 ---EREQTLNQLLVEMDGFEPHQDVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDRRG 377
Query: 358 RTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMD 417
R IL+IH + ++D +DL A PG++GA LA LV EAAL+A RK + + D D
Sbjct: 378 REAILRIHTRGIPVADDLDLEELAAATPGFSGADLANLVNEAALMAARKNKKIVERIDFD 437
Query: 418 DAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQ 477
+A+D++ +G +R I + + A E G A+ +H + + ++SIVPRGQ
Sbjct: 438 EALDKIVLGTERAMI-MSEHDKRVVAYHEAGHAVAAHF-----SPGTDPLRKVSIVPRGQ 491
Query: 478 TLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLA 537
+L V + +E R LL RL V++GGRAAE++++ + T+ A N L +A+ LA
Sbjct: 492 SLG--VTIQAPEEDRFNYSRAYLLARLTVMMGGRAAEKLVFNEMTTGAQ-NDLKEATLLA 548
Query: 538 RKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPV----NFNLDD 593
R+++ +W + + VGP +Y G+ E V D
Sbjct: 549 RRMVGLWGMSDE----------------VGP-------VY--LGMGEQHVFLGREIMQDR 583
Query: 594 DIAWRTEE--------LLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 644
D+A T E LLR+ R LLR++ L + L+ ++ IG+E+I IL
Sbjct: 584 DVAEATLERADEAVQRLLREAMERAEQLLRKYRDKLDALAEALIAEETIGQEKITEILG 642
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/525 (37%), Positives = 312/525 (59%), Gaps = 35/525 (6%)
Query: 125 TLVILTMVLLIRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAV 184
TL + ++L+ F L RR ++ Q ++F +SKA +++ T V F DVAGI++A
Sbjct: 114 TLFLPILLLVGIFFLFRRAQS---GPGSQAMNFGKSKARVQMEPQTQVTFGDVAGIEQAK 170
Query: 185 EELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 244
EL E+V +LKN + F ++G K P GVLL GPPG GKTL+AKA+AGEAGVPF+ ++GSEF
Sbjct: 171 LELTEVVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEF 230
Query: 245 VEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERET 304
VE+ VGVG++R+RDLF++AK N P ++FIDEIDA+ +R D ERE
Sbjct: 231 VEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGND--------EREQ 282
Query: 305 TLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKI 364
TLNQLL E+DGF+ G+I +AATNR D+LD AL+RPGRFDR++ + P+ GR EIL +
Sbjct: 283 TLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNV 342
Query: 365 HASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLT 424
HA +S VDL A+ PG+TGA L+ L+ EAA++A R+ I +++DA+DR+
Sbjct: 343 HARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVL 402
Query: 425 VGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVF 484
GP+++ + + ++ A E G A++ L+ Y + +ISI+PRG+ F
Sbjct: 403 AGPEKKNRVMSEKRKTLVAYHEAGHALVGALMPDY-----DPVQKISIIPRGRAGGLTWF 457
Query: 485 HRLDD--ESYMFERRPQLLHRLQVLLGGRAAEEVIYG-QDTSRASVNYLADASWLARKIL 541
+D ES ++ R L +++ V LGGR AEE+I+G ++ + + N L + +AR+++
Sbjct: 458 TPSEDRMESGLYS-RSYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMV 516
Query: 542 TIWNLENPMVIHGEPPPWRKKVK-FVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTE 600
T + + + + G R+ F+G + + D+ +D++++
Sbjct: 517 TRFGMSDRL---GPVALGRQGGGVFLGRDIASDRDFSDETAAA-------IDEEVS---- 562
Query: 601 ELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNN 645
+L+ Y R +L + L + ++L+ ++ + EE+ +L N
Sbjct: 563 QLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLAN 607
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 301/533 (56%), Gaps = 43/533 (8%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
++F +SKA+ + KF DVAG DE +EL E+V +LK+P F +G + P GVLL
Sbjct: 146 MNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLV 205
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF+ AK N P +IFID
Sbjct: 206 GPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFID 265
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQLL+E+DGF +G+I +AATNR D+L
Sbjct: 266 EIDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFSANEGIIIIAATNRADIL 317
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I++ P+ GR E+LK+HA ++D V+L + A PG++GA L
Sbjct: 318 DPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLEN 377
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAALVA R H I +++A+DR+ GP ++ + + + A E G ++
Sbjct: 378 LLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGV 437
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
L ENA + +++IVPRG V L E F +P+LL ++ LLGGR AE
Sbjct: 438 KL---ENA--DMVHKVTIVPRGMAGGYAVM--LPKEDRYFMTQPELLDKIIGLLGGRVAE 490
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLEN---PM-VIHGEPPPWRKKVKFVGPRL 570
EV +G+ S + N A+ +ARK++T + + PM I G F+G +
Sbjct: 491 EVTFGE-VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQV-----FLGRDI 544
Query: 571 DFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLN 630
E + D + +I + ++++ Y R +L + +L K LL+
Sbjct: 545 QNEQNYSD-----------AIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLD 593
Query: 631 QKEIGREEIDFILN--NYPPQTPISRLLEEENPGTLPF-----IKQEQCSQVE 676
+ + E+I +++ P ++ LE+E K+E+ QVE
Sbjct: 594 METLDAEQIKSLVHEGKLPDDHHLNAHLEKEKASESDVKVNINSKKEETPQVE 646
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/394 (44%), Positives = 252/394 (63%), Gaps = 17/394 (4%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
Q + F +S+A +G V F DVA +E EELQE+V +LKNP+ F +MG K P GVL
Sbjct: 142 QMMSFGKSRARLSENGKK-VTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVL 200
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IF
Sbjct: 201 LVGPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIF 260
Query: 273 IDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
IDE+DA+ +R D ERE TLNQLL+E+DGF+ +G+I +AATNR D
Sbjct: 261 IDELDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFEPNEGIIVMAATNRPD 312
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LDPALLRPGRFDR++ + P+ KGR ILKIH ++D VD+ AK PG+TGA +
Sbjct: 313 VLDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADM 372
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
L EAA++AVR+ I D DDA+D++ GP ++ + + + A E G A++
Sbjct: 373 ENLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKKSKVMSERERKLVAYHETGHALV 432
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
LL + +ISIVPRG+ +D+++M + +LL ++ VLLGGRA
Sbjct: 433 GDLLEHADRTH-----KISIVPRGRAGGMRWALPKEDKNFM--SKQELLDQITVLLGGRA 485
Query: 513 AEEVIYGQDTSRASVNYLADASWLARKILTIWNL 546
+E I+ +D S + N L A+ LAR ++T + +
Sbjct: 486 SES-IFLEDISTGAQNDLERATKLARAMVTEYGM 518
>sp|B4SCV5|FTSH_PELPB ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ftsH
PE=3 SV=1
Length = 662
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 247/394 (62%), Gaps = 16/394 (4%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
F +S+A+ + F DVAG+DEA+EELQE V +L NPE F K+G K P GVLL GP
Sbjct: 192 FGKSRAKMVSEFEVKTTFKDVAGVDEAIEELQETVEFLTNPEKFQKIGGKIPKGVLLLGP 251
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+AKAIAGEA VPF+ ++G++FVE+ VGVG+AR+RDLF++AK N P +IFIDEI
Sbjct: 252 PGTGKTLLAKAIAGEAKVPFFSISGADFVEMFVGVGAARVRDLFEQAKKNAPCIIFIDEI 311
Query: 277 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 336
DA+ R D ERE TLNQLL+E+DGF T + VI +AATNR D+LD
Sbjct: 312 DAVGRSRGAGLGGGHD--------EREQTLNQLLVEMDGFTTNENVILIAATNRPDVLDS 363
Query: 337 ALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLV 396
ALLRPGRFDR+I I P+ +GR ILKIH + VD++ AK+ PG++GA LA LV
Sbjct: 364 ALLRPGRFDRQITIDKPDIRGREAILKIHTRNTPLDGDVDITVLAKSSPGFSGADLANLV 423
Query: 397 QEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLL 456
EAAL+A R I + + + A D++ +GP+RR + + ++ + A E G H+L
Sbjct: 424 NEAALLAARHEQVLITAVNFEQARDKILMGPERRSMFISDEQKKLTAYHEAG-----HVL 478
Query: 457 RRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEV 516
+ +++I+PRG++L + L+D R LL + LGGR AEE+
Sbjct: 479 VSIHTKGSDPIHKVTIIPRGRSLGLTAYLPLEDRYT--HNREYLLAMITYALGGRVAEEL 536
Query: 517 IYGQDTSRASVNYLADASWLARKILTIWNLENPM 550
++ Q+ S + N + A+ +AR+++ W + +
Sbjct: 537 VF-QECSTGAANDIEKATDIARRMVRQWGMSESL 569
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 304/513 (59%), Gaps = 46/513 (8%)
Query: 146 FRKWDLWQG--IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKM 203
R+ QG ++F +S+A +++ TGV F DVAGI+EA EELQE+V +LK PE F +
Sbjct: 172 LRRSSQSQGNALNFGKSRARFQMEAKTGVLFEDVAGIEEAKEELQEVVSFLKKPEKFTAI 231
Query: 204 GIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRA 263
G K P GVLL GPPG GKTL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+A
Sbjct: 232 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 291
Query: 264 KVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVI 323
K N P +IFIDEIDA+ +R D ERE TLNQLL E+DGF+ G+I
Sbjct: 292 KENAPCIIFIDEIDAVGRQRGAGIGGGND--------EREQTLNQLLTEMDGFEGNSGII 343
Query: 324 FLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKN 383
+AATNR D+LD ALLRPGRFDR++ + P KGR IL++HA K++ + L + A+
Sbjct: 344 IIAATNRPDVLDVALLRPGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPEISLEAIARK 403
Query: 384 LPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRR- 442
PG++GA LA ++ EAA++ R+ E I +++DDA+DR+T+G + G+ +R
Sbjct: 404 TPGFSGADLANMLNEAAILTARRRKEGITPNEIDDAIDRVTIGLSLTPLL---DGKKKRL 460
Query: 443 -AATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDD---ESYMFERRP 498
A E+G A++ LL+ + ++++I+PR + +D+ +S M+ R
Sbjct: 461 IAYHELGHALLMTLLKNS-----DLLNKVTIIPRSGGVGGFAQPIMDEGMIDSGMYT-RG 514
Query: 499 QLLHRLQVLLGGRAAEEVIYG-QDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPP 557
L+ R+ + LGGRAAEE I+G + + + N + + LAR+++T + + + + E P
Sbjct: 515 WLIDRITISLGGRAAEEEIFGLAEVTVGAANDIRSVASLAREMVTRYGMSDLGPLALENP 574
Query: 558 PWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDM----YGRTVTL 613
G ++ G ++ +++A + + +R M Y + +
Sbjct: 575 ---------------NGEVFLGRGWQSQQPEYS--EEVAIKIDHQIRTMVFHCYEKARKI 617
Query: 614 LRRHHAALLKTVKVLLNQKEIGREEIDFILNNY 646
+R + + + V +L+ ++ I +E I++ Y
Sbjct: 618 IRENRVLMDRLVDLLIEKETIEGDEFRRIVSEY 650
>sp|D3EZK2|FTSH3_CONWI ATP-dependent zinc metalloprotease FtsH 3 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH3 PE=3 SV=1
Length = 749
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/482 (39%), Positives = 281/482 (58%), Gaps = 39/482 (8%)
Query: 157 FSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGP 216
F RS+A G V F DVAGIDEA EL E+V +LKNP+ + ++G K P GVLL G
Sbjct: 223 FGRSRARRSEGGEAQVTFRDVAGIDEAEAELNEIVDFLKNPQKYQRLGGKIPKGVLLSGQ 282
Query: 217 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 276
PG GKTL+A+A+AGEAGVPF+ M+ SEFVE++VGVG++R+RDLF++AK P++IFIDE+
Sbjct: 283 PGTGKTLLARAVAGEAGVPFFSMSASEFVEMIVGVGASRVRDLFRQAKEAAPAIIFIDEL 342
Query: 277 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 336
DA+ ERE TLNQ+L E+DGF+ VI +AATNR ++LD
Sbjct: 343 DAIGR------ARGGGRGSFGGNDEREQTLNQILTEMDGFEPTTAVIVIAATNRPEILDA 396
Query: 337 ALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLV 396
ALLRPGRFDR++ + AP+ GR ILK+H V ++D VDL S A + PG GA LA LV
Sbjct: 397 ALLRPGRFDRRVTVAAPDRNGRLMILKVHTRSVPLADDVDLESIASSTPGMVGADLANLV 456
Query: 397 QEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLL 456
EAAL+A R+GH + +SD+ DA++++ +G +R+ + + + + R A E G A++ L
Sbjct: 457 NEAALLAARRGHVKVTNSDVADALEKVVLGAERK-VMMSDDDRRRTAYHESGHAIVGML- 514
Query: 457 RRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEV 516
A + ++SI+PRGQ L + F D + Y ++ R L+ +++V LGGR AEE+
Sbjct: 515 ----TAGADPVRKVSIIPRGQALG-VTFSSPDADKYNYDER-YLVGKIKVALGGRVAEEI 568
Query: 517 IYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGP----RLDF 572
++G T+ A + + + +AR+++ W + + +GP +
Sbjct: 569 VFGDLTTGAESD-IQQLTGIARQMVGRWGMS----------------RAIGPIAVLPSEG 611
Query: 573 EGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQK 632
G L T +D+++ ++ + LLR H A L V LL+Q+
Sbjct: 612 NGPLLPGVAETSESTQRLVDEEV----RRIVDSAHAEVTRLLREHRANLDSLVAGLLDQE 667
Query: 633 EI 634
+
Sbjct: 668 TL 669
>sp|Q04Q03|FTSH_LEPBJ ATP-dependent zinc metalloprotease FtsH OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
GN=ftsH PE=3 SV=1
Length = 652
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 285/493 (57%), Gaps = 30/493 (6%)
Query: 153 QGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVL 212
+ F +SKA+ +D + F DVAG +EA EEL E++ +LK+P+ F +G + P GVL
Sbjct: 158 KAFSFGKSKAKMTMDPKVKITFEDVAGCEEAKEELVEIIEFLKDPKKFHAIGARIPTGVL 217
Query: 213 LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIF 272
L GPPG GKTL+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF + K N P +IF
Sbjct: 218 LVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFDQGKKNSPCIIF 277
Query: 273 IDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 332
IDEIDA+ R D ERE TLNQ+L+E+DGF+ +GVI +AATNR D
Sbjct: 278 IDEIDAVGRLRGAGLGGGHD--------EREQTLNQMLVEMDGFEKNEGVIVMAATNRAD 329
Query: 333 LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARL 392
+LDPALLRPGRFDR++ + P+ KGR EILK+H+ KV M+ + L S A+ PG+TGA L
Sbjct: 330 VLDPALLRPGRFDRQVMVDLPDIKGREEILKVHSRKVPMTSDISLHSIARGTPGFTGADL 389
Query: 393 AQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMI 452
A L+ E AL+A RK + + ++++A D++ +GP+R+ + + + A E G A++
Sbjct: 390 ANLINEGALLAARKNKKRVTQEELEEARDKVMMGPERKSFFISEKEKEVIAYHEAGHAIL 449
Query: 453 SHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 512
LL E +++I+PRG+ L + L E + L ++ V +GG
Sbjct: 450 GTLL-----PYTEPVHKVTIIPRGRALG--LTQSLPKEDKHILPKTYWLDQIIVAMGGFI 502
Query: 513 AEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLD- 571
AEE +G TS S N + AS +ARK++ W + + V + G + +
Sbjct: 503 AEEFKFGV-TSTGSSNDIQQASNIARKMVCEWGMSEKL----------GTVNYSGDQTNV 551
Query: 572 FEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQ 631
F G D G + + I E+++ + L+R++ + K LL +
Sbjct: 552 FIGR---DMGHSSKYYSEEFAAMIDKEVREIIQTCLNKGRDLVRKNASKFEGLAKALLAK 608
Query: 632 KEIGREEIDFILN 644
+ I EE+ I++
Sbjct: 609 ETISHEELMTIVH 621
>sp|D2NQQ7|FTSH_ROTMD ATP-dependent zinc metalloprotease FtsH OS=Rothia mucilaginosa
(strain DY-18) GN=ftsH PE=3 SV=1
Length = 756
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 253/392 (64%), Gaps = 16/392 (4%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ FS+S+A+ V+FSDVAG+DEA+ EL+E+ +L PE F ++G K P GVLL
Sbjct: 181 MSFSKSRAKKFTKDKPEVRFSDVAGVDEALAELEEVREFLAEPEKFTRLGAKIPKGVLLY 240
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPFY ++GS+FVE+ VGVG++R+RDLFK AK + +++F+D
Sbjct: 241 GPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFKEAKSDPAAIVFVD 300
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ RR D ERE TLNQLL+E+DGFD VI +AATNR D+L
Sbjct: 301 EIDAVGRRRGVGMGGGND--------EREQTLNQLLVEMDGFDGNSNVIVIAATNRPDVL 352
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR+I + AP+ +GR IL++HA+ ++++VDL+ AK PG+TGA LA
Sbjct: 353 DPALLRPGRFDRQIGVDAPDMQGREHILRVHAAGKPIANTVDLAQVAKRTPGFTGADLAN 412
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
++ EAAL+ R I +D+A+DR+ GP+R + + A E G A+++
Sbjct: 413 VMNEAALLTARDNGNVIDDRAIDEAIDRVMAGPQRSSRIMNEHERKVTAYHEGGHALVAA 472
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
LR +I+I+PRG+ L + DD+ Y R +LL ++ +GGRAAE
Sbjct: 473 ALR-----NSAPVTKITILPRGRALGYTMVMPQDDK-YSTTRH-ELLDQMAYAMGGRAAE 525
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNL 546
E+++ D S + N + A+ ARK++T + +
Sbjct: 526 EIVF-HDPSTGASNDIQKATDTARKMVTDYGM 556
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/497 (38%), Positives = 289/497 (58%), Gaps = 43/497 (8%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +S+A D V F+DVAG DE EELQE+V +LK P+ F ++G + P GVLL
Sbjct: 141 MSFGKSRARMITDKDKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLV 200
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ VGVG+AR+RDLF +AK N P ++FID
Sbjct: 201 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFID 260
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQLL+E+DGF +G+I +AATNR D+L
Sbjct: 261 EIDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFSVNEGIIVIAATNRPDIL 312
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
DPALLRPGRFDR I + P+ KGR EILKIH+ ++ V L A+ PG+TGA L
Sbjct: 313 DPALLRPGRFDRHITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLARRTPGFTGADLEN 372
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAAL+A R+G + I +++++A+ R+ GP++R + + + A E G A+++
Sbjct: 373 LMNEAALLAARRGLKQITMAELEEAITRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAK 432
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
LL ++I+PRG+ + +D+ YM + +++ + LLGGR AE
Sbjct: 433 LL-----PNTPPVHEVTIIPRGRAGGYTMLLPEEDKYYM--SKSEMMDEIVHLLGGRVAE 485
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLE---NPMVIHGEPPPWRKKVKFVGPRLD 571
++ D S + N + A+ +ARK++T + + PM + + F+G
Sbjct: 486 SLVL-NDISTGAQNDIERATNIARKMVTEYGMSERLGPMTFG-----TKSEEVFLG---- 535
Query: 572 FEGSLYDDYGLTEPPVNFNLDDDIAWRTE----ELLRDMYGRTVTLLRRHHAALLKTVKV 627
D G T N +++A + ++ + Y R +LL+ + L + K
Sbjct: 536 ------RDLGRTR-----NYSEEVAAEIDREIKRIIEEAYKRAESLLKENIDKLHRVAKA 584
Query: 628 LLNQKEIGREEIDFILN 644
L+ ++++ EE + + N
Sbjct: 585 LIEKEKLNGEEFEKVFN 601
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 249/398 (62%), Gaps = 16/398 (4%)
Query: 154 GIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLL 213
+ F +SKA + F+DVAG DEA EE+ ELV YLK P F K+G K P G+L+
Sbjct: 131 AMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILM 190
Query: 214 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 273
GPPG GKTL+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F+ A+ + P +IFI
Sbjct: 191 VGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFI 250
Query: 274 DEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 333
DEIDA+ +R D ERE TLNQ+L+E+DGFD +GVI +AATNR D+
Sbjct: 251 DEIDAVGRQRGAGLGGGHD--------EREQTLNQMLVEMDGFDGNEGVILIAATNRPDV 302
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LDPALLRPGRFDR++ + P+ +GR +ILK+H KV +S+ VD A+ PG++GA LA
Sbjct: 303 LDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLA 362
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 453
LV EAAL A R + + + A D++ +G +RR + + + + A E G +I
Sbjct: 363 NLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIG 422
Query: 454 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 513
L+ ++ A +++I+PRGQ L F L + + R +L ++ L GGR A
Sbjct: 423 RLVPDHDPAH-----KVTIIPRGQALGITFF--LPESDILSISRQKLESQISTLYGGRLA 475
Query: 514 EEVIYG-QDTSRASVNYLADASWLARKILTIWNLENPM 550
EE+IYG Q+ S + N + A+ LAR ++T W + +
Sbjct: 476 EEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKL 513
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 288/499 (57%), Gaps = 41/499 (8%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
++F +S+A+ S V F DVAG DE EL+E+V +LK P+ + MG + P G+LL
Sbjct: 148 MNFGKSRAKLATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGILLV 207
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P +IFID
Sbjct: 208 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFID 267
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 334
EIDA+ +R D ERE TLNQLL+E+DGF +G+I +AATNR D+L
Sbjct: 268 EIDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFGVNEGIILVAATNRPDIL 319
Query: 335 DPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 394
D ALLRPGRFDR+I + AP+AKGR E+LK+H ++SD VDL AK PG+ GA L
Sbjct: 320 DKALLRPGRFDRQILVGAPDAKGREEVLKVHVRNKRLSDDVDLKVLAKRTPGFVGADLEN 379
Query: 395 LVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISH 454
L+ EAAL+AVR + I ++++A+ R+ GP+++ + + + A E G A++
Sbjct: 380 LMNEAALLAVRANKKQIGMEELEEAITRVIAGPEKKSRVIHEEDRKITAYHEAGHAIVMK 439
Query: 455 LLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAE 514
+ + ISI+PRG + D SYM + +L + LLGGR AE
Sbjct: 440 F-----SPHSDPVHEISIIPRGMAGGYTMHLPERDTSYM--SKSKLKDEMVGLLGGRVAE 492
Query: 515 EVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVI------HGEPPPWRKKVKFVGP 568
++I G D S + N + S +ARK++ + + + H E F+G
Sbjct: 493 QIIIG-DISTGASNDIQRVSNIARKMVMEYGMSEKLGTITFGSDHDEV--------FIGR 543
Query: 569 RLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVL 628
+ + ++ V F +D+++ + L+ + Y + +L H L KVL
Sbjct: 544 EIGKSKNYSEE-------VAFEIDNEV----KALVDEAYKKAEKILTEHIDKLHAVAKVL 592
Query: 629 LNQKEIGREEIDFILNNYP 647
L+++++ EE + I+ P
Sbjct: 593 LDKEKVTGEEFNAIVEGRP 611
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 287/494 (58%), Gaps = 47/494 (9%)
Query: 155 IDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLE 214
+ F +S+A+ + ++ V+F+DVAG +E +EL E+V +LKNP+ + +G + P GVLLE
Sbjct: 173 MSFGKSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLE 232
Query: 215 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 274
GPPG GKTL+AKA+AGEAGVPFY ++GS+FVE+ VGVG++R+RDLF+ AK PS+IFID
Sbjct: 233 GPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFID 292
Query: 275 EIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGF-DTGKGVIFLAATNRRDL 333
EIDA+ +R D ERE TLNQLL+E+DGF D G VI +AATNR D+
Sbjct: 293 EIDAVGRQRGAGLGGGND--------EREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDV 344
Query: 334 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 393
LDPALLRPGRFDRK+ + AP+ KGR +LK+HA ++ VDL + A PG+ GA L
Sbjct: 345 LDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLE 404
Query: 394 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRR-----AATEVG 448
++ EAALVA R+ + I ++D+D+ +DR GP ++ ++ QS R A E G
Sbjct: 405 NVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKK-----DRIQSMREREIVAYHEAG 459
Query: 449 VAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLL 508
A++ +L EN ++++VPRG+ ++ L DE M L +L L+
Sbjct: 460 HAIVGLVL---ENGS--TVRKVTVVPRGRIGGYML--ALPDEEIMQPTNFHLQDQLASLM 512
Query: 509 GGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGP 568
GGR EE+++G T AS N + A+ +AR ++T + + KK+ V
Sbjct: 513 GGRLGEEIVFGVATPGAS-NDIEKATHIARSMVTEYGMS-------------KKLGMVSY 558
Query: 569 RLDFEGSLYDDYGLTEP---PVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTV 625
D + + DYG T+ +DD++ +L + Y R + H
Sbjct: 559 EGDHQVFIGRDYGQTKTYSEATAVMIDDEV----RRILGEAYDRAKEAIETHREQHKAIA 614
Query: 626 KVLLNQKEIGREEI 639
+ LL + + ++I
Sbjct: 615 EALLKYETLDAKQI 628
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,515,375
Number of Sequences: 539616
Number of extensions: 10801482
Number of successful extensions: 40599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 1177
Number of HSP's that attempted gapping in prelim test: 36818
Number of HSP's gapped (non-prelim): 3401
length of query: 688
length of database: 191,569,459
effective HSP length: 124
effective length of query: 564
effective length of database: 124,657,075
effective search space: 70306590300
effective search space used: 70306590300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)