BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005612
(688 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 33/125 (26%)
Query: 593 HVSQLQREFNENDYEMLLALDENN-HQSGASANQINSLPLSTVQTDNFEEACA------- 644
++ L REF++ DYE L ALD +N + S +IN+LP+ + + E C+
Sbjct: 128 QLALLDREFDDLDYETLRALDSDNVSTTSMSEEEINALPVHKYKVLDPENGCSLAKQAST 187
Query: 645 -------------------------ICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPS 679
+CL+ ++G+ +R LPCLH+FH CIDPWL ++ +
Sbjct: 188 SSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGT 247
Query: 680 CPVCK 684
CPVCK
Sbjct: 248 CPVCK 252
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTD--NFEEACAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A ++I +LP + + F C +C ++ ++G+S+R LPC H FH
Sbjct: 192 LLNQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFH 251
Query: 667 KDCIDPWLSRRPSCPVCKSSIT 688
DCI PWL + +CPVC+ S++
Sbjct: 252 NDCIIPWLEQHDTCPVCRKSLS 273
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 608 MLLALDENNHQSGASANQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHK 667
LL D+++ G + QI++L + + ++ + C++C+ + G+ +R LPC H++H
Sbjct: 535 FLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHV 594
Query: 668 DCIDPWLSRRPSCPVCKSSI 687
CID WLS +CP+C+ ++
Sbjct: 595 HCIDRWLSENSTCPICRRAV 614
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 608 MLLALDENNHQSGASANQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHK 667
LL D+ + G + QI++L + + ++ + C++C+ + G+ +R LPC H++H
Sbjct: 511 FLLNEDDEDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHV 570
Query: 668 DCIDPWLSRRPSCPVCKSSI 687
CID WLS +CP+C+ ++
Sbjct: 571 HCIDRWLSENSTCPICRRAV 590
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 626 INSLPLSTVQ-----TDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSC 680
I LPL TV+ D E CA+C++N + D IR LPC H FH+ CIDPWL +C
Sbjct: 243 IGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTC 302
Query: 681 PVCK 684
P+CK
Sbjct: 303 PMCK 306
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I +LP + ++ C +C ++ ++G+S+R LPC H FH
Sbjct: 191 LLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFH 250
Query: 667 KDCIDPWLSRRPSCPVCKSSIT 688
DCI PWL + +CPVC+ S++
Sbjct: 251 NDCIIPWLEQHDTCPVCRKSLS 272
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICLD GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICLD GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICLD GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICLD GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 576 ILEALESAVDFGDLETRHVSQLQREFNENDYEM----LLALDENNHQSGASANQINSLPL 631
I A ++ G H + + + N + LL EN A +I +LP
Sbjct: 158 ISPAAVPSLGLGPWGVLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADKEKIQALPT 217
Query: 632 STVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCKSSIT 688
V ++ C +C ++ ++G+S+R LPC H FH CI PWL + SCPVC+ S+T
Sbjct: 218 VPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 276
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 620 GASANQINSLPLSTVQTDNFE----EACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLS 675
G + QI++L + + D + + C++C+ + G+ +R LPCLH+FH CID WLS
Sbjct: 587 GLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLS 646
Query: 676 RRPSCPVCKSSI 687
+CPVC+ +
Sbjct: 647 ENCTCPVCRRPV 658
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 608 MLLALDENNHQSGASANQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHK 667
LL D+++ G + QI++L ++ + C++C+ + G+ +R LPC H++H
Sbjct: 533 FLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHI 592
Query: 668 DCIDPWLSRRPSCPVCKSSI 687
CID WLS +CP+C+ ++
Sbjct: 593 HCIDRWLSENSTCPICRRAV 612
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 625 QINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPVC 683
Q+ +P Q + + CAICLD GD +R LPC H +H C+DPWL++ R +CP+C
Sbjct: 212 QLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPIC 271
Query: 684 KSSI 687
K +
Sbjct: 272 KQPV 275
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I +LP V ++ C +C D+ ++G+ +R LPC H FH
Sbjct: 193 LLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFH 252
Query: 667 KDCIDPWLSRRPSCPVCKSSIT 688
CI PWL + SCPVC+ S+T
Sbjct: 253 DGCIVPWLEQHDSCPVCRKSLT 274
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I +LP V ++ C +C D+ +G+ +R LPC H FH
Sbjct: 196 LLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFH 255
Query: 667 KDCIDPWLSRRPSCPVCKSSIT 688
CI PWL + SCPVC+ S+T
Sbjct: 256 DGCIVPWLEQHDSCPVCRKSLT 277
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 608 MLLALDENNHQSGASANQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHK 667
LL D+++ G + QI++L ++ + C++C+ + G+ +R LPC H++H
Sbjct: 550 FLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHV 609
Query: 668 DCIDPWLSRRPSCPVCKSSI 687
CID WLS +CP+C+ ++
Sbjct: 610 HCIDRWLSENSTCPICRRAV 629
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICL+ GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 625 QINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPVC 683
Q+ +P Q + + CAICLD GD +R LPC H +H C+DPWL++ R +CP+C
Sbjct: 212 QLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPIC 271
Query: 684 KSSI 687
K +
Sbjct: 272 KQPV 275
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 624 NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPV 682
+Q+ LP+ + + + CAICL+ GD +R LPC H +H C+DPWL++ + +CPV
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 683 CKSSIT 688
CK +
Sbjct: 281 CKQKVV 286
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 601 FNENDYEMLLALDENNHQSGASANQI-NSLPLSTVQTDNFEEACAICLDNPSIGDSIRHL 659
FN D+E L +D +H +A + SLP + +++ E C +CL +++ +
Sbjct: 45 FNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVIRSSKAELKCPVCLLEFEEEETVIEM 104
Query: 660 PCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
PC H FH +CI PWLS+ SCP+C+ +
Sbjct: 105 PCHHLFHSNCILPWLSKTNSCPLCRHEL 132
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 625 QINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSR-RPSCPVC 683
Q+ +P Q + + CAICLD GD +R LPC H +H C+DPWL++ R +CP+C
Sbjct: 212 QLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPIC 271
Query: 684 KSSI 687
K +
Sbjct: 272 KQPV 275
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 608 MLLALDENNHQSGASANQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLPCLHKFHK 667
LL D+++ G + QI++L ++ + C++C+ + G+ +R LPC H++H
Sbjct: 668 FLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHI 727
Query: 668 DCIDPWLSRRPSCPVCKSSI 687
CID WLS +CP+C+ ++
Sbjct: 728 HCIDRWLSENSTCPICRRAV 747
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSG-ASANQINSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G A+ I+ L TV +TD + CA+C+++ D +R LPC H
Sbjct: 226 ARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHV 285
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWLS +CP+CK +I
Sbjct: 286 FHKSCVDPWLSEHCTCPMCKLNI 308
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSG-ASANQINSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G A+ I+ L TV +TD + CA+C+++ D +R LPC H
Sbjct: 226 ARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHV 285
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWLS +CP+CK +I
Sbjct: 286 FHKSCVDPWLSEHCTCPMCKLNI 308
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I +LP + ++ C +C ++ ++G+ +R LPC H FH
Sbjct: 192 LLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFH 251
Query: 667 KDCIDPWLSRRPSCPVCKSSIT 688
DCI PWL + +CPVC+ S++
Sbjct: 252 NDCIIPWLEQHDTCPVCRKSLS 273
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 641 EACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
+ CAIC++ D+IR LPC H+FHK+CIDPWL +CP+CK +
Sbjct: 301 DCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDV 347
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSG-ASANQINSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G A+ I+ L TV +TD + CA+C+++ D +R LPC H
Sbjct: 226 ARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHV 285
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWLS +CP+CK +I
Sbjct: 286 FHKSCVDPWLSEHCTCPMCKLNI 308
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 641 EACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
E CA+CLD +R LPC H+FH+DC+DPWL + +CP+CK ++
Sbjct: 325 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 371
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 606 YEMLLALDENNHQSGASANQINSLPLSTVQTDNFE----EACAICLDNPSIGDSIRHLPC 661
+ +L D+++ G + QI++L + ++ + + C++C+ + G+ +R LPC
Sbjct: 591 FFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPC 650
Query: 662 LHKFHKDCIDPWLSRRPSCPVCKSSI 687
+H+FH CID WLS +CP+C+ +
Sbjct: 651 MHEFHIHCIDRWLSENCTCPICRQPV 676
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 637 DNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
D E CA+CLD +R LPC H+FH+DC+DPWL + +CP+CK ++
Sbjct: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 369
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I SLP TV + + C +C ++ ++ + +R LPC H FH
Sbjct: 192 LLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFH 251
Query: 667 KDCIDPWLSRRPSCPVCKSSI 687
CI PWL +CPVC+ S+
Sbjct: 252 SSCIVPWLELHDTCPVCRKSL 272
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 626 INSLPLSTVQ-----TDNFEEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSC 680
I L L TV+ D E CA+C++N + D IR LPC H FH+ CIDPWL +C
Sbjct: 247 IGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTC 306
Query: 681 PVCK 684
P+CK
Sbjct: 307 PMCK 310
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 609 LLALDENNHQSGASANQINSLPLSTVQTDNFEEA--CAICLDNPSIGDSIRHLPCLHKFH 666
LL EN A +I SLP TV + C +C ++ ++ + +R LPC H FH
Sbjct: 193 LLGQLENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFH 252
Query: 667 KDCIDPWLSRRPSCPVCKSSI 687
CI PWL +CPVC+ S+
Sbjct: 253 SSCIVPWLELHDTCPVCRKSL 273
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 601 FNENDYEMLLALDENNHQSGASANQI-NSLPLSTVQTDNFEEACAICLDNPSIGDSIRHL 659
FN D+E L +D +H +A + SLP + + + + C +CL +++ +
Sbjct: 45 FNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEM 104
Query: 660 PCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
PC H FH +CI PWLS+ SCP+C+ +
Sbjct: 105 PCHHLFHSNCILPWLSKTNSCPLCRHEL 132
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 620 GASANQINSLPLSTVQTDNFEE--ACAICLDNPSIGDSIRHLP-CLHKFHKDCIDPWLSR 676
G + + +N +P + TD E +C++CL + +G+++R LP C H FH CID WL R
Sbjct: 152 GLTGDSLNRIPKVRI-TDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRR 210
Query: 677 RPSCPVCK 684
SCP+C+
Sbjct: 211 HASCPLCR 218
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 641 EACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCK 684
E CA+C++N D +R LPC H FH+ CIDPWL +CP+CK
Sbjct: 262 ENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCK 305
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 621 ASANQINSLPLSTVQTDNFEEA---CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRR 677
AS + I++LP V D + CA+C+D G ++ +PC H FH+DC+ PWL
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250
Query: 678 PSCPVCKSSI 687
SCPVC+ +
Sbjct: 251 NSCPVCRFEL 260
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 621 ASANQINSLPLSTVQTDNFEEA---CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRR 677
AS + I +LPL + N CA+C+D+ G + +PC H +HKDC+ PWL
Sbjct: 199 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 258
Query: 678 PSCPVCK 684
SCPVC+
Sbjct: 259 NSCPVCR 265
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 643 CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRP--SCPVCKSSI 687
CAICLD GD ++ LPC H +H CIDPW S+ P SCPVCK S+
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 643 CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRP--SCPVCKSSI 687
CAICLD GD ++ LPC H +H CIDPW S+ P SCPVCK S+
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSGASANQ-INSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G +A + I+ L + T+ +T++ + CA+C++ D +R LPC H
Sbjct: 240 ARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHL 299
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWL +CP+CK +I
Sbjct: 300 FHKSCVDPWLLDHRTCPMCKMNI 322
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 617 HQSGASANQINSLPL----STVQTDNFEEACAICLDNPSIGDSIRHLP-CLHKFHKDCID 671
H SG + I++LP+ S + N+ CA+CL D +R LP C H FH DCID
Sbjct: 104 HDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCID 163
Query: 672 PWLSRRPSCPVCK 684
WL +CP+C+
Sbjct: 164 TWLLSHSTCPLCR 176
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSGASANQ-INSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G +A + I+ L + T+ +T++ + CA+C++ D +R LPC H
Sbjct: 239 ARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHL 298
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWL +CP+CK +I
Sbjct: 299 FHKSCVDPWLLDHRTCPMCKMNI 321
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 611 ALDENNHQSG-ASANQINSLPLSTV-----QTDNFEEACAICLDNPSIGDSIRHLPCLHK 664
A D N + G A+ I+ L + T+ +T++ + CA+C++ D +R LPC H
Sbjct: 229 ARDRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHL 288
Query: 665 FHKDCIDPWLSRRPSCPVCKSSI 687
FHK C+DPWL +CP+CK +I
Sbjct: 289 FHKCCVDPWLVDHRTCPMCKMNI 311
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 601 FNENDYEML-LALDENNHQSGASA-NQINSLPLSTVQTDNFEEACAICLDNPSIGDSIRH 658
FN D+E L L +D ++H +A + +LP + ++ E C +CL ++
Sbjct: 32 FNRMDFEDLGLVVDWDHHLPPPAAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIE 91
Query: 659 LPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
+PC H FH +CI PWLS+ SCP+C+ +
Sbjct: 92 MPCHHLFHSNCILPWLSKTNSCPLCRHEL 120
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 621 ASANQINSLPLSTVQTDNF-----EEACAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLS 675
AS + LP+ + E C IC +N IGD ++ LPC H FH C+ PWL
Sbjct: 203 ASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLD 262
Query: 676 RRPSCPVCK 684
SCP+C+
Sbjct: 263 EHNSCPICR 271
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 601 FNENDYEML-LALDENNHQSGASANQI-NSLPLSTVQTDNFEEACAICLDNPSIGDSIRH 658
FN D+E L L +D ++H +A + +LP + ++ E C +CL ++
Sbjct: 32 FNRMDFEDLGLVVDWDHHLPPPAAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIE 91
Query: 659 LPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
+PC H FH CI PWLS+ SCP+C+ +
Sbjct: 92 MPCHHLFHSSCILPWLSKTNSCPLCRYEL 120
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 643 CAICLDNPSIGDSIRHLPCLHKFHKDCIDPWLSRRPSCPVCKSSI 687
CAICL+ G+ +R +PC H+FHK C+DPWL + +CP C+ +I
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 627 NSLPLSTVQTDNFEEACAICLDNPSIGDSIRHLP-CLHKFHKDCIDPWLSRRPSCPVCK 684
+ LP S+V + CAIC+ S G+ IR LP C H FH CID WL+ R SCP C+
Sbjct: 97 DDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,458,907
Number of Sequences: 539616
Number of extensions: 11743940
Number of successful extensions: 35524
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 33237
Number of HSP's gapped (non-prelim): 2191
length of query: 688
length of database: 191,569,459
effective HSP length: 124
effective length of query: 564
effective length of database: 124,657,075
effective search space: 70306590300
effective search space used: 70306590300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)