Query 005613
Match_columns 688
No_of_seqs 419 out of 2151
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 02:11:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005613.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005613hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2194 Aminopeptidases of the 100.0 1E-101 2E-106 881.1 41.7 579 34-668 4-586 (834)
2 PRK10199 alkaline phosphatase 100.0 9.4E-28 2E-32 257.0 27.3 260 86-367 30-345 (346)
3 PF04389 Peptidase_M28: Peptid 100.0 9.4E-30 2E-34 249.4 8.4 170 180-350 1-179 (179)
4 KOG2195 Transferrin receptor a 99.9 3.7E-23 8.1E-28 238.3 16.3 206 158-373 334-553 (702)
5 KOG3946 Glutaminyl cyclase [Po 99.8 2E-17 4.4E-22 168.9 19.7 249 82-362 46-334 (338)
6 COG2234 Iap Predicted aminopep 99.7 1.2E-17 2.6E-22 185.9 12.6 191 161-362 183-392 (435)
7 TIGR03176 AllC allantoate amid 99.5 5.8E-14 1.2E-18 155.7 15.1 127 87-247 3-141 (406)
8 PRK08262 hypothetical protein; 99.5 9.4E-14 2E-18 157.2 16.7 170 43-246 2-201 (486)
9 PRK12890 allantoate amidohydro 99.5 4.8E-13 1E-17 148.4 16.8 128 85-246 7-145 (414)
10 PRK12891 allantoate amidohydro 99.5 5.2E-13 1.1E-17 148.3 16.2 128 83-244 6-145 (414)
11 PRK09133 hypothetical protein; 99.5 8.7E-13 1.9E-17 148.8 16.9 150 82-261 32-203 (472)
12 TIGR01879 hydantase amidase, h 99.5 7.3E-13 1.6E-17 146.5 15.8 127 87-247 1-139 (401)
13 PRK09290 allantoate amidohydro 99.4 1.5E-12 3.3E-17 144.4 16.7 131 83-247 3-145 (413)
14 PRK13590 putative bifunctional 99.4 1.2E-12 2.5E-17 151.8 15.4 127 85-245 179-321 (591)
15 PRK13799 unknown domain/N-carb 99.4 1.3E-12 2.9E-17 151.4 14.7 127 85-245 179-321 (591)
16 PRK08596 acetylornithine deace 99.4 5.1E-12 1.1E-16 140.6 18.2 144 87-262 13-178 (421)
17 PRK06133 glutamate carboxypept 99.4 6E-12 1.3E-16 139.6 18.7 145 85-262 35-197 (410)
18 PRK12892 allantoate amidohydro 99.4 4.8E-12 1E-16 140.0 16.5 130 83-247 6-146 (412)
19 PRK12893 allantoate amidohydro 99.4 4.3E-12 9.3E-17 140.5 16.1 130 84-247 7-148 (412)
20 PRK07473 carboxypeptidase; Pro 99.4 1.1E-11 2.3E-16 136.2 18.4 149 84-263 8-174 (376)
21 PRK08588 succinyl-diaminopimel 99.4 9.9E-12 2.1E-16 135.8 16.1 140 86-261 1-161 (377)
22 TIGR01910 DapE-ArgE acetylorni 99.4 1.1E-11 2.4E-16 135.5 16.0 145 91-262 2-167 (375)
23 PRK07906 hypothetical protein; 99.3 1.1E-11 2.3E-16 138.0 14.9 130 90-248 2-155 (426)
24 PRK07338 hypothetical protein; 99.3 3.1E-11 6.7E-16 133.2 17.1 157 86-262 16-190 (402)
25 PRK09104 hypothetical protein; 99.3 3.1E-11 6.7E-16 136.0 17.2 146 85-261 15-190 (464)
26 PRK07907 hypothetical protein; 99.3 3.7E-11 7.9E-16 134.9 17.6 145 85-263 16-185 (449)
27 TIGR01880 Ac-peptdase-euk N-ac 99.3 3.6E-11 7.8E-16 132.7 16.7 147 83-260 5-173 (400)
28 PRK06446 hypothetical protein; 99.3 3.5E-11 7.7E-16 134.6 16.4 137 87-257 2-160 (436)
29 PRK13983 diaminopimelate amino 99.3 6.2E-11 1.3E-15 130.1 17.2 149 87-260 5-180 (400)
30 PF05450 Nicastrin: Nicastrin; 99.3 8.1E-11 1.7E-15 121.3 16.3 167 180-346 1-200 (234)
31 PRK13013 succinyl-diaminopimel 99.3 8.5E-11 1.8E-15 130.6 17.6 153 86-262 13-188 (427)
32 PRK08201 hypothetical protein; 99.3 6.7E-11 1.4E-15 133.0 16.7 148 85-262 12-183 (456)
33 TIGR01893 aa-his-dipept aminoa 99.3 5.4E-11 1.2E-15 134.7 15.6 136 86-262 3-165 (477)
34 COG1363 FrvX Cellulase M and r 99.3 6.4E-10 1.4E-14 120.4 22.2 226 87-365 2-348 (355)
35 PRK04443 acetyl-lysine deacety 99.2 9.2E-11 2E-15 127.3 15.3 134 85-263 4-149 (348)
36 KOG2275 Aminoacylase ACY1 and 99.2 1.4E-10 3E-15 125.5 15.5 123 111-263 49-193 (420)
37 PRK05469 peptidase T; Provisio 99.2 1.6E-10 3.5E-15 128.0 16.5 127 87-245 2-185 (408)
38 PRK07079 hypothetical protein; 99.2 1.7E-10 3.7E-15 130.2 16.7 149 84-261 14-190 (469)
39 PRK06837 acetylornithine deace 99.2 2.1E-10 4.4E-15 128.0 16.6 145 86-245 19-184 (427)
40 TIGR01883 PepT-like peptidase 99.2 1.6E-10 3.4E-15 125.6 15.2 128 88-246 1-146 (361)
41 PRK06915 acetylornithine deace 99.2 2.7E-10 5.9E-15 126.6 17.2 156 86-260 16-192 (422)
42 PRK13381 peptidase T; Provisio 99.2 2.4E-10 5.1E-15 126.5 16.1 125 89-246 3-184 (404)
43 PRK07318 dipeptidase PepV; Rev 99.2 2.1E-10 4.5E-15 129.5 15.4 127 86-248 13-167 (466)
44 TIGR01892 AcOrn-deacetyl acety 99.2 2.5E-10 5.5E-15 123.7 15.4 135 92-261 2-156 (364)
45 PRK13007 succinyl-diaminopimel 99.2 3.3E-10 7.1E-15 122.5 16.3 133 87-262 7-156 (352)
46 PRK15026 aminoacyl-histidine d 99.2 3.6E-10 7.9E-15 128.3 17.2 138 84-262 7-171 (485)
47 PRK07522 acetylornithine deace 99.2 2.9E-10 6.2E-15 124.5 15.6 141 87-261 4-165 (385)
48 PF01546 Peptidase_M20: Peptid 99.2 1.1E-10 2.4E-15 114.3 10.8 165 183-361 1-188 (189)
49 PRK07205 hypothetical protein; 99.2 3.2E-10 6.8E-15 127.2 15.3 127 85-247 9-164 (444)
50 PRK08652 acetylornithine deace 99.2 3.2E-10 7E-15 122.1 14.7 130 87-261 2-143 (347)
51 PRK00466 acetyl-lysine deacety 99.2 3.7E-10 8E-15 122.3 15.2 129 86-263 9-149 (346)
52 PRK13009 succinyl-diaminopimel 99.2 3.7E-10 7.9E-15 123.2 14.9 137 88-260 3-162 (375)
53 PRK05111 acetylornithine deace 99.1 6.7E-10 1.4E-14 121.6 15.9 139 87-260 5-168 (383)
54 TIGR03106 trio_M42_hydro hydro 99.1 4.6E-09 1E-13 114.3 21.9 147 197-360 181-339 (343)
55 TIGR01882 peptidase-T peptidas 99.1 7E-10 1.5E-14 123.3 15.2 127 87-245 3-187 (410)
56 PRK06156 hypothetical protein; 99.1 1.9E-09 4.2E-14 123.4 19.2 138 85-261 44-213 (520)
57 PF09940 DUF2172: Domain of un 99.1 1.6E-09 3.5E-14 116.5 17.0 241 83-366 56-308 (386)
58 COG0624 ArgE Acetylornithine d 99.1 1E-09 2.3E-14 121.4 15.7 145 87-261 13-180 (409)
59 PRK08651 succinyl-diaminopimel 99.1 1.4E-09 3.1E-14 119.5 16.2 149 85-263 4-173 (394)
60 PRK08554 peptidase; Reviewed 99.1 1.6E-09 3.5E-14 121.5 16.5 141 88-263 2-166 (438)
61 COG4882 Predicted aminopeptida 99.1 1.3E-09 2.9E-14 115.3 14.3 170 162-365 178-359 (486)
62 TIGR01886 dipeptidase dipeptid 99.1 1.1E-09 2.3E-14 123.9 14.4 126 87-248 13-166 (466)
63 KOG2526 Predicted aminopeptida 99.1 4.3E-09 9.4E-14 113.6 17.8 196 161-361 192-415 (555)
64 PRK09961 exoaminopeptidase; Pr 99.1 1.2E-08 2.7E-13 111.0 21.3 151 197-363 164-333 (344)
65 PRK13004 peptidase; Reviewed 99.1 2.6E-09 5.7E-14 118.0 16.3 135 86-261 14-171 (399)
66 TIGR03107 glu_aminopep glutamy 99.1 1.6E-08 3.4E-13 110.4 21.6 149 197-363 176-341 (350)
67 TIGR01246 dapE_proteo succinyl 99.1 2.3E-09 4.9E-14 117.0 15.1 135 91-261 3-160 (370)
68 TIGR01902 dapE-lys-deAc N-acet 99.0 2.2E-09 4.8E-14 115.7 14.6 125 92-263 2-138 (336)
69 TIGR01900 dapE-gram_pos succin 99.0 5.8E-09 1.3E-13 114.5 15.2 135 93-263 2-171 (373)
70 PRK09864 putative peptidase; P 99.0 4.2E-08 9.2E-13 107.0 21.1 146 197-363 173-341 (356)
71 TIGR01887 dipeptidaselike dipe 99.0 5.4E-09 1.2E-13 117.7 14.6 124 87-246 2-153 (447)
72 TIGR01891 amidohydrolases amid 99.0 8.5E-09 1.8E-13 112.5 15.0 132 91-262 3-151 (363)
73 TIGR03320 ygeY M20/DapE family 98.9 1.9E-08 4.1E-13 111.0 15.4 134 87-260 13-168 (395)
74 TIGR03526 selenium_YgeY putati 98.9 2.9E-08 6.2E-13 109.7 16.0 133 87-260 13-168 (395)
75 PRK08737 acetylornithine deace 98.9 2.1E-08 4.5E-13 109.9 14.3 131 86-262 5-156 (364)
76 PLN02693 IAA-amino acid hydrol 98.7 3.7E-07 8E-12 102.7 15.9 121 89-247 49-183 (437)
77 COG4187 RocB Arginine degradat 98.6 1.8E-07 4E-12 101.8 11.3 158 83-264 4-209 (553)
78 PLN02280 IAA-amino acid hydrol 98.6 7.2E-07 1.6E-11 101.4 16.7 135 88-258 94-243 (478)
79 COG4310 Uncharacterized protei 98.4 1.7E-06 3.8E-11 90.6 11.9 175 178-366 177-356 (435)
80 PF05343 Peptidase_M42: M42 gl 98.3 2.7E-06 5.9E-11 90.8 9.0 133 197-342 132-282 (292)
81 KOG2276 Metalloexopeptidases [ 98.1 3.2E-05 6.9E-10 84.0 13.4 142 85-246 14-179 (473)
82 KOG2657 Transmembrane glycopro 97.6 0.00048 1E-08 76.9 11.6 188 161-350 156-375 (596)
83 COG2195 PepD Di- and tripeptid 96.7 0.0044 9.6E-08 69.2 8.3 60 198-260 143-203 (414)
84 PF04114 Gaa1: Gaa1-like, GPI 96.7 0.047 1E-06 62.8 16.3 184 161-366 2-228 (504)
85 COG1473 AbgB Metal-dependent a 96.2 0.11 2.4E-06 58.0 15.0 125 101-260 23-163 (392)
86 PRK02256 putative aminopeptida 92.7 0.7 1.5E-05 52.8 10.6 156 182-351 245-453 (462)
87 PRK02813 putative aminopeptida 92.5 0.53 1.1E-05 53.3 9.3 145 195-351 230-419 (428)
88 PTZ00371 aspartyl aminopeptida 92.0 1.7 3.6E-05 49.9 12.5 150 195-351 247-446 (465)
89 KOG3566 Glycosylphosphatidylin 83.0 14 0.00031 42.9 12.4 93 161-264 119-228 (617)
90 PF10190 Tmemb_170: Putative t 51.8 1.5E+02 0.0033 27.2 9.6 49 421-470 32-80 (105)
91 PRK08651 succinyl-diaminopimel 43.6 51 0.0011 36.2 6.5 56 306-366 338-393 (394)
92 PF10337 DUF2422: Protein of u 43.3 4.8E+02 0.01 29.7 14.4 34 584-617 186-219 (459)
93 PRK07522 acetylornithine deace 40.5 78 0.0017 34.6 7.3 74 276-364 311-384 (385)
94 PRK08596 acetylornithine deace 37.4 69 0.0015 35.8 6.3 57 306-367 363-419 (421)
95 PRK07338 hypothetical protein; 30.5 83 0.0018 34.8 5.5 79 276-366 321-400 (402)
96 PRK06133 glutamate carboxypept 29.7 70 0.0015 35.7 4.8 58 305-366 352-409 (410)
97 PRK07079 hypothetical protein; 26.0 1.9E+02 0.0041 32.9 7.5 58 307-367 401-458 (469)
98 PRK13381 peptidase T; Provisio 25.7 1E+02 0.0022 34.3 5.1 77 276-364 327-403 (404)
99 TIGR01880 Ac-peptdase-euk N-ac 24.5 1.4E+02 0.003 33.0 5.9 56 306-365 343-399 (400)
100 PRK08126 hypothetical protein; 24.1 1.1E+03 0.024 26.9 15.2 53 181-234 355-409 (432)
101 COG3152 Predicted membrane pro 24.0 4.8E+02 0.01 24.7 8.5 22 575-598 73-94 (125)
102 PRK13009 succinyl-diaminopimel 22.5 1.6E+02 0.0034 32.1 5.8 53 306-364 322-374 (375)
103 PF05656 DUF805: Protein of un 22.3 5.8E+02 0.013 23.0 9.7 10 573-582 66-75 (120)
104 PRK08652 acetylornithine deace 20.2 1.7E+02 0.0038 31.2 5.5 56 305-365 291-346 (347)
No 1
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1e-101 Score=881.06 Aligned_cols=579 Identities=36% Similarity=0.608 Sum_probs=497.7
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc--cccCCCCCCHHHHHHHHHHHHccCCCCCCCHHHH-
Q 005613 34 DSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTA--EQAGRRGFSELEAMKHVKALTQLGPHAVGSDALD- 110 (688)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~v~~~~~~~lP~~~~~--~~~~~~~fs~erA~~~L~~L~~igpr~~GS~~~~- 110 (688)
|.++..+++|....++..+..++...+.+ +.+.++|.|++. ++..+++|+++||++++++++++|||++||++|+
T Consensus 4 ~~~~~~~~~r~~~~~~~~~~f~~~~~~~~--~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls~~G~~~~gS~~ne~ 81 (834)
T KOG2194|consen 4 DKSFRRKRKRNGAPCLAHLIFLLSIAIVL--YLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLSAAGPHPVGSDNNEM 81 (834)
T ss_pred hhHhhhhhhhccchHHHHHHHHHHHHHHH--HHHhhccccCCCcchhcCchhhHHHHHHHHHHHHHhcCCcccCchhhHH
Confidence 34455556666555555444444433333 344555655554 4444689999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhccccCCc-ceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEeecCC
Q 005613 111 RALQYVLAASQKIKESKHWE-ADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHID 189 (688)
Q Consensus 111 ~a~~yL~~~l~~ig~~~~~~-~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~D 189 (688)
.+++|+.+|+++++++++.+ .++|+|.+... |.. ..++++++|++++||++|++||. ++++.++|++||+|
T Consensus 82 ~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~s-g~~-----~~~~~~~~Y~~i~NIvVki~~k~--~~~~~~lLlnaHfD 153 (834)
T KOG2194|consen 82 HASSFILKEVNKIRKGSQSDLYDMEVDLQSAS-GSF-----ILEGMTLVYQNISNIVVKISPKN--GNDKNALLLNAHFD 153 (834)
T ss_pred HHHHHHHHHHHHHHhhhhcchhhheeceeecc-cee-----eehhhhheeeeeeeEEEecCCCC--CCccceeeeecccc
Confidence 99999999999999876653 46677665442 111 12678999999999999999984 34446999999999
Q ss_pred CcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcCCCCcc
Q 005613 190 TVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA 269 (688)
Q Consensus 190 Sv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gg~~~ 269 (688)
|||.+|||+||++|||+|||++|++.+.....+|+|+|+||++||.+++|||+|++||||+++++++||||++|+||+++
T Consensus 154 Svpt~~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGrei 233 (834)
T KOG2194|consen 154 SVPTGPGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREI 233 (834)
T ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCccccee
Confidence 99999999999999999999999999987778999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHH
Q 005613 270 LFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (688)
Q Consensus 270 lfqtg~~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sL 349 (688)
+||+||++|+++.|.++++||+++++++|+||+|.|||||||++|++|+|+||+|+|+..|++.|||++|..+++.++++
T Consensus 234 LFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~ 313 (834)
T KOG2194|consen 234 LFQAGPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSL 313 (834)
T ss_pred EEecCCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccccccCcchh
Confidence 99999977999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCeEEecccCceEEEeechhHHHHHHHHHHHHHHHHHHHHHhcchh
Q 005613 350 QHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYP 429 (688)
Q Consensus 350 q~~g~~vl~lv~~La~~~~lp~~~~~~~~~~~~~~~~VyFd~lG~~~v~y~~~~~~~l~~~v~~~~l~~~~~~~~~~~~~ 429 (688)
||+|+|++++++.++|+ ++.+ .++.+++ +||||++|++|+.|+++++.+||+.+.. .++ ....+.+.+
T Consensus 314 q~tGen~L~~v~~lan~-el~~------~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~~---~i~-l~~~~~g~~ 381 (834)
T KOG2194|consen 314 QHTGENILALVRSLANS-ELDN------STERSKG-TVYFDVVGKYFLAYSESTGVILNITICI---SIW-LMSLRSGSS 381 (834)
T ss_pred hhhhhHHHHHHHHHhch-hhcc------ccccCCC-ceehhhhhhhhheeehhhhhhhhhhhhh---hhh-hhhhcccch
Confidence 99999999999999998 5432 3445666 9999999999999999999999933222 222 223344444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 005613 430 AAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSK 509 (688)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~~~~~~~~~~~~~~~~~~~~~ 509 (688)
.++++++.|+.+++++++++++++++|++++.+ +.+|+||++||+++|||.||+++|+..+|.++....++ +
T Consensus 382 ~~~~f~~~~~~~i~s~~~~~~l~~~~a~~l~~v-~l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~~-------~ 453 (834)
T KOG2194|consen 382 QLGKFILACLLQILSIVVAIGLPVLVALFLDWV-GLPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSKR-------H 453 (834)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhHHHHHHHhhcc-cccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhccc-------c
Confidence 588999999999999999999999999999988 46999999999999999999999999999884221111 1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchHHHHHH
Q 005613 510 GMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLL 589 (688)
Q Consensus 510 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~t~~~i~S~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 589 (688)
+ +...+.+++++|+ +|+++++++|++||||+|++++|+++|++++ +++....++.++..|..+++
T Consensus 454 --~--------~~~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~~--~~~~~~~l~~~~~~~~~~~~ 518 (834)
T KOG2194|consen 454 --S--------LEYLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVISY--LLNTLTILHLCGTLYLITLL 518 (834)
T ss_pred --c--------cchhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHHH--HHhhceeeccCCceeeeeee
Confidence 1 1123567888887 7888999999999999999999999999985 56788889999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccceEEE
Q 005613 590 LGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICK 668 (688)
Q Consensus 590 ~~~~~p~~~~~~~~~~~~~~fip~~gR~g~~~~~np~~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~~~~~~~~~~~ 668 (688)
+||+.|+.+.+|.++.++.+|||||||+|.+. ||| .+||.++++++.+.++|++|++|+ +||++++..
T Consensus 519 i~~~~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~-----fr~~~~i~~ 586 (834)
T KOG2194|consen 519 ICQVGPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHL-----FRRSKSIIL 586 (834)
T ss_pred eeehHhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHH-----HcCCchhHH
Confidence 99999999999999999999999999999765 996 999999999999999999999999 999988754
No 2
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.96 E-value=9.4e-28 Score=257.04 Aligned_cols=260 Identities=19% Similarity=0.255 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHc-cCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccc-cccccccc
Q 005613 86 ELEAMKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK-TLIYSDLN 163 (688)
Q Consensus 86 ~erA~~~L~~L~~-igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~-~~~Y~~~~ 163 (688)
.+-|.+++++|+. +++|++||+++.++++||.++|+++|. +++.+.|..+.- .... .+. ........
T Consensus 30 ~~~a~~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~------~v~~q~f~~~~~-~~~~----~g~~~~~~~~g~ 98 (346)
T PRK10199 30 GDFANTQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGY------QSDIRTFNSRYI-YTAR----DNRKNWHNVTGS 98 (346)
T ss_pred cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCC------ceEeeeccccce-eecc----cccccccCCccc
Confidence 4667778888876 899999999999999999999999994 444443332100 0000 000 00112468
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCCCcCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005613 164 HIVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (688)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf 229 (688)
|||++++|+ .++.|+++||+|||+. .|||+||++|||+|||++|.|.+. +++++|+|++
T Consensus 99 nVIa~~~G~-----~~~~Ill~AH~DTV~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~ 171 (346)
T PRK10199 99 TVIAAHEGK-----APQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVA 171 (346)
T ss_pred eEEEEECCC-----CCCeEEEEEEcCcCCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEE
Confidence 999999874 2467999999999852 379999999999999999999865 5788999999
Q ss_pred eCCCCCCCCChHHHHhcCCc--cCCccEEEEeecCcCCCCcceeccCC-CHHHH-----HHHHHHccCCCCcccc-----
Q 005613 230 NTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGP-NLWAV-----ENFAAVAKYPSGQIIG----- 296 (688)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNLD~~G~gg~~~lfqtg~-~~~li-----~~~~~aa~~P~~~~l~----- 296 (688)
+++||.|+.||+.|+++.+. .+++.++||+|+++.++ ...+..|. ++... +...+.+ ...|..+.
T Consensus 172 ~~~EE~Gl~GS~~~~~~~~~~~~~~~~~~iNlD~~~~~d-~~~~~~g~~~~~~~~~~~~d~~~~~a-~~~g~~~~~~~~~ 249 (346)
T PRK10199 172 TSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGD-KLYFNSGVNTPEAVRKLTRDRALAIA-RRHGIAATTNPGL 249 (346)
T ss_pred ECCcccCcHHHHHHHHhcCccchhcEEEEEEeccCCCCC-ceEEecCCCcHHHHhHHHHHHHHHHH-HHcCCccccCCCc
Confidence 99999999999999976543 46899999999998753 44455454 22211 1112222 11222221
Q ss_pred cccccCCCCCCCCchHHhhhcCCCeEEEEeee-------------------CCCCCCC-CcCCccCCCCH-------HHH
Q 005613 297 QDLFASGVFETATDFQVYTEVAGLSGLDFAYT-------------------DKSAVYH-TKNDRLDLLKP-------GSL 349 (688)
Q Consensus 297 ~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~-------------------~~~~~YH-T~~Dt~d~id~-------~sL 349 (688)
+..|..| ....|||.+|.+ .|||.+.+... ..+..|| |.+|+.|++|. ..+
T Consensus 250 ~~~~p~g-~~~rSDH~~F~~-~GIP~l~~~a~n~~~g~~d~~~q~~~~~~~~~g~~~h~~~~d~~~~l~~~~pgri~~~~ 327 (346)
T PRK10199 250 NKNYPKG-TGCCNDAEVFDK-AGIPVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRC 327 (346)
T ss_pred cccccCC-CcCCcccHHHHh-cCCCeEEeeccccccCCcccceecccCccCCCCccccCcCcchHHHHHHhcchHHHHHH
Confidence 1223334 336799999999 99999987321 2256789 89999999885 455
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 005613 350 QHLGENMLDFLLQTASST 367 (688)
Q Consensus 350 q~~g~~vl~lv~~La~~~ 367 (688)
....+.++.++.+|++..
T Consensus 328 ~~~~~~~~~~~~~~~~~~ 345 (346)
T PRK10199 328 RDVVRIMLPLVKELAKAS 345 (346)
T ss_pred HhHHHHHHHHHHHHhccC
Confidence 567889999999999864
No 3
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=99.96 E-value=9.4e-30 Score=249.38 Aligned_cols=170 Identities=31% Similarity=0.488 Sum_probs=131.3
Q ss_pred CeEEEeecCCCcC------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhc-CCccCC
Q 005613 180 NAILVSSHIDTVS------AGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ-HPWSTT 252 (688)
Q Consensus 180 ~~VLl~AH~DSv~------~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~-h~~~~~ 252 (688)
++|+++|||||++ .++||+||++|||+|||++|.|.+.+.+|+++|+|+|+++||.|+.||++|+++ +.+.++
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~ 80 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDN 80 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhccccc
Confidence 3699999999988 889999999999999999999999777889999999999999999999999963 345689
Q ss_pred ccEEEEeecCcCCCCcceeccCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeC-C
Q 005613 253 IRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD-K 330 (688)
Q Consensus 253 v~a~iNLD~~G~gg~~~lfqtg~-~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~-~ 330 (688)
+.++||+|++|.+++....+..+ .++.++.+.+...++.+.....+.......+..+||.+|.. .|+|++.+.... .
T Consensus 81 ~~~~inlD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sD~~~F~~-~gip~~~~~~~~~~ 159 (179)
T PF04389_consen 81 IAAVINLDMIGSGDPTVYSEGSPSLPSRLEAYLSSFKQPYGSSLGPDVPPEKPTFGGSDHYPFSK-AGIPAVTLSSTDGY 159 (179)
T ss_dssp EEEEEEECSSBSSSSEEEEEEGGGHHHHHHHHHHHHHHHHHCHTSSECEEEESSTTSSTCHHHHT-TT-EEEEEEESSSS
T ss_pred ceeEEeccccccCcccceeeeeccccchhhhhhhhhhhhhhcccccccccccCCCCCCCcHhhhc-CCEeEEEEEecCCC
Confidence 99999999999988887777554 23434444333323333333333332234567899999997 999999999887 6
Q ss_pred CCCCCCcCCccCCCCHHHHH
Q 005613 331 SAVYHTKNDRLDLLKPGSLQ 350 (688)
Q Consensus 331 ~~~YHT~~Dt~d~id~~sLq 350 (688)
.+.|||+.||+|++|+++||
T Consensus 160 ~~~~Ht~~Dt~~~~~~~~l~ 179 (179)
T PF04389_consen 160 NPYYHTPEDTPDNLDPDTLQ 179 (179)
T ss_dssp GTTTTSTT-SGGGC-HHHH-
T ss_pred CCCCCCcccChhhcCCccCC
Confidence 78899999999999999987
No 4
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=99.90 E-value=3.7e-23 Score=238.34 Aligned_cols=206 Identities=19% Similarity=0.261 Sum_probs=163.1
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCC
Q 005613 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEE 234 (688)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~---~~~~p~~~I~flf~~~EE 234 (688)
.-.+++||+++|+|. ++++++|++++|.|||. +||.|+++|+|.++|++|.+.. .|++|+|+|+|++|+|||
T Consensus 334 ~~~ki~NIig~I~Gs---~epD~~ViigahrDSw~--~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeE 408 (702)
T KOG2195|consen 334 EETKIQNIIGKIEGS---EEPDRYVIIGAHRDSWT--FGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEE 408 (702)
T ss_pred eeeeeeeEEEEEecC---cCCCeEEEEeccccccc--cCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchh
Confidence 345789999999996 57899999999999997 7899999999999999999864 689999999999999999
Q ss_pred CCCCChHHHHhcCCc--cCCccEEEEeecCcCCCCcceeccCCCHHHHHHHHHH---ccCCCCcccccccccCCCCCCCC
Q 005613 235 EGLNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAV---AKYPSGQIIGQDLFASGVFETAT 309 (688)
Q Consensus 235 ~gl~GS~~f~~~h~~--~~~v~a~iNLD~~G~gg~~~lfqtg~~~~li~~~~~a---a~~P~~~~l~~e~f~~g~ips~T 309 (688)
.|+.||..|++++.. .....+++|+|+++.++...-.+ .+|.+.+...++ .+.|........+ .....+|
T Consensus 409 fGliGStE~~E~~~~~L~~~av~yin~d~~~~~~~~l~~~--~~PlL~~li~~~~k~~~~p~~~~~~~~v---~~~g~~S 483 (702)
T KOG2195|consen 409 FGLLGSTEWAEEYLKNLKSRAVVYINVDNAVLGDYTLHVK--TTPLLTDLIEEAAKSVLSPDKGDQSNRV---LSLGGGS 483 (702)
T ss_pred ccccccHHHHHHHHHHhhheeEEEEeccccccCCceeEEe--cCccHHHHHHHHHhccCCCCccccceeE---eccCCCC
Confidence 999999999988754 47889999999999876443333 456555555444 3455543221111 2237899
Q ss_pred chHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCC----CH--HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 005613 310 DFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLL----KP--GSLQHLGENMLDFLLQTASSTSIPKGN 373 (688)
Q Consensus 310 D~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i----d~--~sLq~~g~~vl~lv~~La~~~~lp~~~ 373 (688)
||.+|.++.|||+++++|....+.|||.+||++.+ |+ .....++.+....+..+++++.+|.+.
T Consensus 484 d~~~F~~~~GIpsv~~~f~~~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~d~llPfd~ 553 (702)
T KOG2195|consen 484 DYASFLQFAGIPSVDFAFNRTYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILADDPLLPFDI 553 (702)
T ss_pred cchhhccccCcceeeeeecCCcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCccccCcH
Confidence 99999999999999999999999999999996544 33 444556667777777788878888653
No 5
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=2e-17 Score=168.89 Aligned_cols=249 Identities=18% Similarity=0.252 Sum_probs=183.3
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
+.-+-.|.++.|.-+-. ||.+||+++.++++||.+.++.++ ..+|.|.|.... . ..+.+
T Consensus 46 ~~s~~~~~~~~L~p~lv--~Rvpgs~g~~~vr~~i~~~l~~l~------w~ve~~~f~~~t--------p-----~g~~~ 104 (338)
T KOG3946|consen 46 PDSDWNRLWENLLPILV--PRVPGSPGSRQVRRFIIQHLRNLG------WAVETDAFTDNT--------P-----LGTRN 104 (338)
T ss_pred CCCCHHHHHHhhhhhhc--cccCCCCccHHHHHHHHHHHHhcC------ceeeeccccccC--------c-----ceeee
Confidence 34567788888766653 899999999999999999999996 468888766531 0 12357
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCCC----CCCCCChhHHHHHHHHHHHHHhcC----CCCCCcEEEEEeCCC
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG----EGAGDCSSCVAVMLELARVMSQWA----HEFKNAVIFLFNTGE 233 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s----pGA~Dd~sGvA~~LE~ar~L~~~~----~~p~~~I~flf~~~E 233 (688)
..|+|+++.+. .++++++.|||||.-.. .||.|.+.-||.|++++|.+.+.- ..++-++.++|+|||
T Consensus 105 f~nii~tl~~~-----A~r~lVlachydsk~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE 179 (338)
T KOG3946|consen 105 FNNLIATLDPN-----ASRYLVLACHYDSKIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE 179 (338)
T ss_pred eeeEEEecCCC-----cchheeeecccccccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH
Confidence 88999999764 56889999999996321 689999999999999999997632 245678999999999
Q ss_pred C--------CCCCChHHHHhcC------C-----ccCCccEEEEeecCcCCCCcce--eccCCCHHHHHHH------HHH
Q 005613 234 E--------EGLNGAHSFVTQH------P-----WSTTIRVAVDLEAMGIGGRSAL--FQAGPNLWAVENF------AAV 286 (688)
Q Consensus 234 E--------~gl~GS~~f~~~h------~-----~~~~v~a~iNLD~~G~gg~~~l--fqtg~~~~li~~~------~~a 286 (688)
| ..++||++.+++. + ..+++...+-+|-.|+.+++.- |.. ++.|..+.- .++
T Consensus 180 EAf~eW~p~DSlYGsRhLA~~~~sw~~~~~r~~~~ld~idl~vLldllga~~p~f~~~~~~-t~~wF~Rl~~iE~~l~~~ 258 (338)
T KOG3946|consen 180 EAFEEWGPEDSLYGSRHLAAKWESWPHSGIRGDLLLDGIDLLVLLDLLGAPNPTFYNFFPN-TDRWFHRLQSIEGELALL 258 (338)
T ss_pred HHHhhcCCccccchHHHHHHHHhccCCCCCccccccccchHhhhHHHhcCCChhHhhcCcc-hHHHHHHHHHHHHHHHHH
Confidence 9 3578999999761 2 2256778888898998876631 221 234443321 111
Q ss_pred ---ccCCCCcccccccccCCCC--CCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHH
Q 005613 287 ---AKYPSGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (688)
Q Consensus 287 ---a~~P~~~~l~~e~f~~g~i--ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~ 361 (688)
..++.- ...|+.+.. --++||.+|.. .|+|.+.+.-.....+|||+.|+..++|..+..+.+..+--++.
T Consensus 259 g~l~s~r~~----~~~Fq~~~~~~~veDDHiPFlr-rgVPVLHlI~~pFPsvWHt~dD~e~nldy~tt~~~~lilr~Fv~ 333 (338)
T KOG3946|consen 259 GLLASHRLP----PRYFQPGGLSSVVEDDHIPFLR-RGVPVLHLIPVPFPSVWHTPDDNERNLDYATTDNLALIIRVFVA 333 (338)
T ss_pred HHHHhccCC----chhccccCccccccCCcchhhh-cCCceEEecCCCCcccccCccchhhcCCchhHHHHHHHHHHHHH
Confidence 122211 122443321 13789999999 99999999988888999999999999999999998877766554
Q ss_pred H
Q 005613 362 Q 362 (688)
Q Consensus 362 ~ 362 (688)
+
T Consensus 334 e 334 (338)
T KOG3946|consen 334 E 334 (338)
T ss_pred H
Confidence 4
No 6
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=99.73 E-value=1.2e-17 Score=185.94 Aligned_cols=191 Identities=26% Similarity=0.320 Sum_probs=135.6
Q ss_pred ccceEEEEEcCCCC-------CCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005613 161 DLNHIVLRILPKYA-------SEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (688)
Q Consensus 161 ~~~NVi~~i~g~~~-------~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (688)
...|+++++++... ....++.+++++|+|+++.+|||+||++|+|++||++|.|.+. +|+++|+|+++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~--~p~~~v~f~~~~aE 260 (435)
T COG2234 183 TSKNVAATISGSSQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN--PPKRTVRFVAFGAE 260 (435)
T ss_pred EEEEEeeeeecccccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC--CCCceEEEEEecch
Confidence 44556665555310 1246788999999999999999999999999999999999986 49999999999999
Q ss_pred CCCCCChHHHHhcCC--ccCCccEEEEeecCcCCCCcceeccCC---C--HHHHHHHHHHccCCCCcccccccccCCCCC
Q 005613 234 EEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP---N--LWAVENFAAVAKYPSGQIIGQDLFASGVFE 306 (688)
Q Consensus 234 E~gl~GS~~f~~~h~--~~~~v~a~iNLD~~G~gg~~~lfqtg~---~--~~li~~~~~aa~~P~~~~l~~e~f~~g~ip 306 (688)
|.|+.||+.|++++. ..+.+.+++|+||.|..++...++... . +.......+...++... .+. ....
T Consensus 261 E~Gl~GS~~~~~~~~~~~~~~~~~viN~Dm~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~ 334 (435)
T COG2234 261 ESGLLGSEAYVKRLSKDLDKKIALVINLDMLGSPNPTPTLILYGNGLERVPPGLRAVAALIGRPVDP-----STV-QDFD 334 (435)
T ss_pred hhcccccHHHHhcCCcchhhhhheEEecccccCCCCCcceEEeccCCccccchHHHHHHHHHhhccc-----ccc-CCCC
Confidence 999999999997665 357888899999999976333333211 1 11122222111111211 111 1234
Q ss_pred CCCchHHhhhcCCCeEEEEeeeCCC-----CCCCCcCCccCCCCHHHHHHHHHHHHHHHHH
Q 005613 307 TATDFQVYTEVAGLSGLDFAYTDKS-----AVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (688)
Q Consensus 307 s~TD~~~F~~~~GiPgld~a~~~~~-----~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~ 362 (688)
..+||.+|.. .|+|++.++..... .++||..|| ++ |..+++..+..+.+....
T Consensus 335 ~~sd~~~f~~-~gi~~~~~~~~~~~~~~~~~~~~t~~d~-~~-d~~~~~~~~~~~~~~~~~ 392 (435)
T COG2234 335 PRSDHYPFTE-AGIPSLFLFSGAPGGVEAVAWGHTAADT-DK-DLSTLDQHGDAVAATLVL 392 (435)
T ss_pred CCCcchhhhh-cCCcceeeeecCCccccccccccccccc-cc-chhhhcccchhhhhhhhh
Confidence 5799999998 99999987754333 579999999 88 888888877555444433
No 7
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.54 E-value=5.8e-14 Score=155.74 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccc
Q 005613 87 LEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (688)
Q Consensus 87 erA~~~L~~L~~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y 159 (688)
.|.+++|.+|++||. |...|+++.++++|+.+++++.| +++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~G------l~v~~D----------------------- 53 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESG------LETRFD----------------------- 53 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CEEEEc-----------------------
Confidence 578999999999852 66779999999999999999998 345554
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC---
Q 005613 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG--- 236 (688)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g--- 236 (688)
...|++++++|+ +++.++|++++|+||||. .|..|+..||++.||++|.|.+.+.+|+++|.+++|.+||.+
T Consensus 54 -~~gN~~~~~~g~---~~~~~~i~~gsHlDtv~~-gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~ 128 (406)
T TIGR03176 54 -DVGNLYGRLVGT---EFPEETILTGSHIDTVVN-GGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFP 128 (406)
T ss_pred -CCCcEEEEecCC---CCCCCeEEEeccccCCCC-CCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCC
Confidence 457999999986 356689999999999995 688999999999999999999998999999999999999986
Q ss_pred --CCChHHHHhcC
Q 005613 237 --LNGAHSFVTQH 247 (688)
Q Consensus 237 --l~GS~~f~~~h 247 (688)
+.||+.+..+.
T Consensus 129 ~~~~Gs~~~~g~~ 141 (406)
T TIGR03176 129 YVFWGSKNIFGLA 141 (406)
T ss_pred cccccHHHHhCCC
Confidence 89999998533
No 8
>PRK08262 hypothetical protein; Provisional
Probab=99.54 E-value=9.4e-14 Score=157.21 Aligned_cols=170 Identities=16% Similarity=0.197 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccCCCCCCHHHHHHHHHHHHccCCCCCCCHHH-------HHHHHH
Q 005613 43 RSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDAL-------DRALQY 115 (688)
Q Consensus 43 ~~~~~~l~~~~l~~~~~~~v~~~~~~~lP~~~~~~~~~~~~fs~erA~~~L~~L~~igpr~~GS~~~-------~~a~~y 115 (688)
|++++.|+.+++++.+++++++++|++..-.++ .-.+..++.+++.+.|+++.+|.. +.+.+++ .+..+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~L~~lv~i~S-~s~~~~~~~~~~~~~~~~~~ 78 (486)
T PRK08262 2 RRILLGLLALLLLLAAVLAVRTFRFKSRQIDVP--AVAPVAVDEDAAAERLSEAIRFRT-ISNRDRAEDDAAAFDALHAH 78 (486)
T ss_pred cchHHHHHHHHHHHHHhhhheeEEcccCCCCcc--ccCCCcCCHHHHHHHHHHhcccce-eccCCCCcccHHHHHHHHHH
Confidence 678888888888999999999999875444433 223457889999999999999743 2332211 357888
Q ss_pred HHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC--
Q 005613 116 VLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-- 193 (688)
Q Consensus 116 L~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-- 193 (688)
|.+++++++. +++.. .. +..|+++.++|+ ++..+.|++.+|+|+||.
T Consensus 79 L~~~~~~~g~------~~~~~--~~--------------------~~~~vv~~~~g~---~~~~~~ill~gH~DvVp~~~ 127 (486)
T PRK08262 79 LEESYPAVHA------ALERE--VV--------------------GGHSLLYTWKGS---DPSLKPIVLMAHQDVVPVAP 127 (486)
T ss_pred HHHhChhhhc------eeEEE--EE--------------------CCccEEEEEECC---CCCCCeEEEECcccccCCCC
Confidence 8888887762 23322 11 125888888764 233378999999999974
Q ss_pred ---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhc
Q 005613 194 ---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (688)
Q Consensus 194 ---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (688)
++|+.||++|++++|.+++.|.+.+.+++.+|.|+|..+||.|..|++.+++.
T Consensus 128 ~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~ 201 (486)
T PRK08262 128 GTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAEL 201 (486)
T ss_pred CCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHH
Confidence 36999999999999999999998877788999999999999998999988853
No 9
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=99.49 E-value=4.8e-13 Score=148.35 Aligned_cols=128 Identities=18% Similarity=0.187 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHHccC------CCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccc
Q 005613 85 SELEAMKHVKALTQLG------PHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (688)
Q Consensus 85 s~erA~~~L~~L~~ig------pr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~ 158 (688)
+.+++++++.++.+|+ .|+..|+++.++.+||.++|++.| ++++.+
T Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~---------------------- 58 (414)
T PRK12890 7 NGERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAG------LEVRRD---------------------- 58 (414)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEEc----------------------
Confidence 5689999999999875 356778888899999999999998 334432
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC---
Q 005613 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE--- 235 (688)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~--- 235 (688)
...|++++++|+ .++.+.|++++|+|+||. .|+.|+++|+|++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 59 --~~~nlia~~~g~---~~~~~~l~~~~H~DtVp~-~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~ 132 (414)
T PRK12890 59 --AAGNLFGRLPGR---DPDLPPLMTGSHLDTVPN-GGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRF 132 (414)
T ss_pred --CCCcEEEEeCCC---CCCCCEEEEeCcccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeccccccc
Confidence 235999999774 234578999999999995 57899999999999999999988878899999999999997
Q ss_pred --CCCChHHHHhc
Q 005613 236 --GLNGAHSFVTQ 246 (688)
Q Consensus 236 --gl~GS~~f~~~ 246 (688)
++.|++.+...
T Consensus 133 ~~~~~G~~~~~~~ 145 (414)
T PRK12890 133 GPSMIGSRALAGT 145 (414)
T ss_pred CCccccHHHHHcc
Confidence 66899888743
No 10
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=99.48 E-value=5.2e-13 Score=148.31 Aligned_cols=128 Identities=20% Similarity=0.249 Sum_probs=107.9
Q ss_pred CCCHHHHHHHHHHHHccC--C-----CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccc
Q 005613 83 GFSELEAMKHVKALTQLG--P-----HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~ig--p-----r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~ 155 (688)
.++.+|.+++++.|.+|| | |+..|+++.++++||.+++++.| ++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G------~~v~~~------------------- 60 (414)
T PRK12891 6 RVDGERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAG------CTVRVD------------------- 60 (414)
T ss_pred ccCHHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEEC-------------------
Confidence 346679999999999985 2 77788888899999999999998 344442
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 005613 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE 235 (688)
Q Consensus 156 ~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~ 235 (688)
...|++++++|+ ++..+.|++++|+||||. .|..|+++||+++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 61 -----~~gNl~a~~~g~---~~~~~~l~~~~H~DtVp~-gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~ 131 (414)
T PRK12891 61 -----AMGNLFARRAGR---DPDAAPVMTGSHADSQPT-GGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEG 131 (414)
T ss_pred -----CCCCEEEEecCC---CCCCCeEEEEecccCCCC-CccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccc
Confidence 235999999875 234588999999999995 46789999999999999999999888999999999999998
Q ss_pred C-----CCChHHHH
Q 005613 236 G-----LNGAHSFV 244 (688)
Q Consensus 236 g-----l~GS~~f~ 244 (688)
+ +.||+.+.
T Consensus 132 ~~f~~~~~Gs~~~~ 145 (414)
T PRK12891 132 SRFAPSMVGSGVFF 145 (414)
T ss_pred CcCCcccccHHHHh
Confidence 5 47998775
No 11
>PRK09133 hypothetical protein; Provisional
Probab=99.46 E-value=8.7e-13 Score=148.84 Aligned_cols=150 Identities=18% Similarity=0.216 Sum_probs=116.3
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEE-EEeeeccCCCcccccccccccccccc
Q 005613 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVE-VDFFHAKSGANRVGTGVFKGKTLIYS 160 (688)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~ve-vd~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (688)
++.+.+++.+.|++|.+|. -+.+..++.++.+|+.++++++|. +++ ++.+.. ..
T Consensus 32 ~~~~~~~~~~~l~~Lv~i~-S~s~~~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~------------------~~ 86 (472)
T PRK09133 32 PTADQQAARDLYKELIEIN-TTASTGSTTPAAEAMAARLKAAGF------ADADIEVTGP------------------YP 86 (472)
T ss_pred cchhHHHHHHHHHHHhccC-CCCCCcchHHHHHHHHHHHHHcCC------CceEEEeccC------------------CC
Confidence 4688999999999999973 333233456899999999999983 221 121110 01
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005613 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~ 220 (688)
+..|++++++|+ .+.+.|++++|+|+||. ++|+.||++|+|++|++++.|.+.+.+
T Consensus 87 ~~~nli~~~~g~----~~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~ 162 (472)
T PRK09133 87 RKGNLVARLRGT----DPKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFK 162 (472)
T ss_pred CceeEEEEecCC----CCCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCC
Confidence 457999999764 23367999999999984 489999999999999999999988878
Q ss_pred CCCcEEEEEeCCCC-CCCCChHHHHhcCCccCCccEEEEeec
Q 005613 221 FKNAVIFLFNTGEE-EGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 221 p~~~I~flf~~~EE-~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
++++|.|++..+|| .|..|++.++++++...+..++|+ |.
T Consensus 163 ~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~ 203 (472)
T PRK09133 163 PKRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EG 203 (472)
T ss_pred CCCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CC
Confidence 89999999999999 788999999977654334567788 64
No 12
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.46 E-value=7.3e-13 Score=146.47 Aligned_cols=127 Identities=20% Similarity=0.158 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccc
Q 005613 87 LEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (688)
Q Consensus 87 erA~~~L~~L~~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y 159 (688)
+|.++++.++.+++. |...|+++.++++||.+++++.| ++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G------~~~~~~----------------------- 51 (401)
T TIGR01879 1 QRLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAG------LEVRFD----------------------- 51 (401)
T ss_pred ChHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCC------CEEEEe-----------------------
Confidence 367889999988753 44558888899999999999998 344432
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC----
Q 005613 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE---- 235 (688)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~---- 235 (688)
...||+++++|+ .++.+.|++++|+||||. .|..|+..|++++|++++.|++.+.+|+++|.|+++.+||.
T Consensus 52 -~~~nl~a~~~g~---~~~~~~l~~~~H~DtV~~-gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~ 126 (401)
T TIGR01879 52 -EVGNLIGRKEGT---EPPLEVVLSGSHIDTVVN-GGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFP 126 (401)
T ss_pred -cCCcEEEEecCC---CCCCCEEEEecccccCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcc
Confidence 236999999875 234588999999999996 47889999999999999999999989999999999999997
Q ss_pred -CCCChHHHHhcC
Q 005613 236 -GLNGAHSFVTQH 247 (688)
Q Consensus 236 -gl~GS~~f~~~h 247 (688)
++.||+.++.+.
T Consensus 127 ~~~~Gs~~~~~~~ 139 (401)
T TIGR01879 127 YGMWGSRNMVGLA 139 (401)
T ss_pred cccccHHHHhccc
Confidence 789999998544
No 13
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=99.44 E-value=1.5e-12 Score=144.39 Aligned_cols=131 Identities=20% Similarity=0.203 Sum_probs=108.3
Q ss_pred CCCHHHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccc
Q 005613 83 GFSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~ 155 (688)
+.+.+++++++++|+++++ |+..|.++.++.+||.++|+++| ++++++
T Consensus 3 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g------~~~~~~------------------- 57 (413)
T PRK09290 3 RIDAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAG------LTVRVD------------------- 57 (413)
T ss_pred CcCHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcC------CEEEEc-------------------
Confidence 3567999999999999854 66778888899999999999998 344431
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 005613 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE 235 (688)
Q Consensus 156 ~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~ 235 (688)
...|++++++|. .++.+.|++++|+|+||. .|..|++.|+|+++++++.|.+.+.+++++|.|+++.+||.
T Consensus 58 -----~~~nl~a~~~g~---~~~~~~l~l~gH~DtVp~-~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~ 128 (413)
T PRK09290 58 -----AVGNLFGRLEGR---DPDAPAVLTGSHLDTVPN-GGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEG 128 (413)
T ss_pred -----CCCcEEEEecCC---CCCCCEEEEecCccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCcc
Confidence 235999999763 123578999999999995 46789999999999999999988878889999999999998
Q ss_pred -----CCCChHHHHhcC
Q 005613 236 -----GLNGAHSFVTQH 247 (688)
Q Consensus 236 -----gl~GS~~f~~~h 247 (688)
|+.|++.+++++
T Consensus 129 g~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 129 SRFGPAMLGSRVFTGAL 145 (413)
T ss_pred ccccCccccHHHHHccc
Confidence 568999888554
No 14
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.43 E-value=1.2e-12 Score=151.82 Aligned_cols=127 Identities=17% Similarity=0.134 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHHccCC----------CCCCCHHHHHHHHHHHHHHHhhccccCCcc-eEEEEeeeccCCCccccccccc
Q 005613 85 SELEAMKHVKALTQLGP----------HAVGSDALDRALQYVLAASQKIKESKHWEA-DVEVDFFHAKSGANRVGTGVFK 153 (688)
Q Consensus 85 s~erA~~~L~~L~~igp----------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~-~vevd~~~~~~g~~~~~~~~~~ 153 (688)
-.+|.++++.+|++|+. |...|++..++++|+.++++++| + ++++|
T Consensus 179 ~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~G------l~~v~~D----------------- 235 (591)
T PRK13590 179 LGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCG------FDEVHID----------------- 235 (591)
T ss_pred HHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcC------CCeeeEC-----------------
Confidence 46899999999999753 33458899999999999999998 3 34443
Q ss_pred cccccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005613 154 GKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (688)
Q Consensus 154 ~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (688)
...|++++++|+ +++.+.|++++|+|||+. .|..|+..||+++||++|.|.+.+.+++++|.|++|.+|
T Consensus 236 -------~~GNl~~~~~g~---~~~~~~v~~gsHlDTV~~-gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~E 304 (591)
T PRK13590 236 -------AVGNVVGRYKGS---TPQAKRLLTGSHYDTVRN-GGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEE 304 (591)
T ss_pred -------CCCCEEEEecCC---CCCCCeEEEecccccCCC-CCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCC
Confidence 458999999885 234588999999999985 577999999999999999999999888999999999999
Q ss_pred CC-----CCCChHHHHh
Q 005613 234 EE-----GLNGAHSFVT 245 (688)
Q Consensus 234 E~-----gl~GS~~f~~ 245 (688)
|. ++.||+.+..
T Consensus 305 Eg~rF~~~~~GS~~~~G 321 (591)
T PRK13590 305 EGQRYKATFLGSGALIG 321 (591)
T ss_pred ccccCCccccchHHHhC
Confidence 97 5899998874
No 15
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.42 E-value=1.3e-12 Score=151.37 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=112.1
Q ss_pred CHHHHHHHHHHHHccC----------CCCCCCHHHHHHHHHHHHHHHhhccccCCcce-EEEEeeeccCCCccccccccc
Q 005613 85 SELEAMKHVKALTQLG----------PHAVGSDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFK 153 (688)
Q Consensus 85 s~erA~~~L~~L~~ig----------pr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~~g~~~~~~~~~~ 153 (688)
..+|.++++.+|++|| .|...|+++.++++|+.+++++.| ++ +++|
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~G------l~~v~~D----------------- 235 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAG------FDEVEID----------------- 235 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CCeEeEC-----------------
Confidence 5799999999999986 166778999999999999999999 34 5554
Q ss_pred cccccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005613 154 GKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (688)
Q Consensus 154 ~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (688)
...||+++++|+ +++.+.|++++|+|||+. .|.-|+..||+++||++|.|.+.+.+++++|.++.|.+|
T Consensus 236 -------~~gNv~~~~~g~---~~~~p~v~~gSHlDTV~~-gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~E 304 (591)
T PRK13799 236 -------AVGNVVGRYKAA---DDDAKTLITGSHYDTVRN-GGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEE 304 (591)
T ss_pred -------CCCCEEEEcCCC---CCCCCeEEEeccccccCC-CCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCC
Confidence 468999999886 345789999999999984 788999999999999999999999999999999999999
Q ss_pred CC-----CCCChHHHHh
Q 005613 234 EE-----GLNGAHSFVT 245 (688)
Q Consensus 234 E~-----gl~GS~~f~~ 245 (688)
|. ++.||+.+.-
T Consensus 305 Eg~rF~~~~~GS~~~~G 321 (591)
T PRK13799 305 EGQRFKATFLGSGALIG 321 (591)
T ss_pred CccCCCccccchHHHhC
Confidence 97 7899999984
No 16
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.41 E-value=5.1e-12 Score=140.61 Aligned_cols=144 Identities=17% Similarity=0.201 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHccCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 87 LEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
+++.+.+++|.+|. -+.+. .+++++.+||.++|+++| ++++.+ ... ....|+
T Consensus 13 ~~~~~~l~~Lv~i~-S~s~~~~~e~~~a~~l~~~l~~~G------~~~~~~--~~~------------------~~~~nv 65 (421)
T PRK08596 13 DELLELLKTLVRFE-TPAPPARNTNEAQEFIAEFLRKLG------FSVDKW--DVY------------------PNDPNV 65 (421)
T ss_pred HHHHHHHHHHhcCC-CCCCCchhHHHHHHHHHHHHHHCC------CeEEEE--Ecc------------------CCCceE
Confidence 67889999999973 22222 234578999999999998 334432 110 134799
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
+++++|++ ....+.|++++|+|+||. ++|+.|+++|+|++|++++.|.+.+.+++.+
T Consensus 66 ia~~~g~~--~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~ 143 (421)
T PRK08596 66 VGVKKGTE--SDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGD 143 (421)
T ss_pred EEEecCCC--CCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCc
Confidence 99997741 122357999999999874 2899999999999999999999988788899
Q ss_pred EEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
|.|+|..+||.|..|++.++++.. ....+++.|..
T Consensus 144 v~~~~~~dEE~g~~G~~~~~~~~~---~~d~~i~~ep~ 178 (421)
T PRK08596 144 LIFQSVIGEEVGEAGTLQCCERGY---DADFAVVVDTS 178 (421)
T ss_pred EEEEEEeccccCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999999999996543 34677887753
No 17
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.41 E-value=6e-12 Score=139.65 Aligned_cols=145 Identities=22% Similarity=0.313 Sum_probs=111.5
Q ss_pred CHHHHHHHHHHHHccCCCCCCCH-HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGSD-ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~-~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (688)
..+++.+.+++|.+| |...+.+ ++.++.+||.++|+++| ++++.+. ... ....
T Consensus 35 ~~~~~~~~l~~lv~i-~S~s~~~~~~~~~~~~l~~~L~~~G------~~v~~~~--~~~-----------------~~~~ 88 (410)
T PRK06133 35 EQPAYLDTLKELVSI-ESGSGDAEGLKQVAALLAERLKALG------AKVERAP--TPP-----------------SAGD 88 (410)
T ss_pred hHHHHHHHHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHhCC------CeEEEEc--cCC-----------------CCCC
Confidence 446788899999997 3333433 34589999999999998 3344321 100 1246
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCCCcCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005613 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (688)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-----------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~ 226 (688)
|++++++|+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.+|.
T Consensus 89 ~lia~~~g~-----~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~ 163 (410)
T PRK06133 89 MVVATFKGT-----GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLT 163 (410)
T ss_pred eEEEEECCC-----CCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 999999763 2367999999999984 379999999999999999999988777788999
Q ss_pred EEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
|+|..+||.|..|++.++++.. .+...+++.|..
T Consensus 164 ~~~~~dEE~g~~G~~~~~~~~~--~~~d~~i~~ep~ 197 (410)
T PRK06133 164 VLFNPDEETGSPGSRELIAELA--AQHDVVFSCEPG 197 (410)
T ss_pred EEEECCcccCCccHHHHHHHHh--ccCCEEEEeCCC
Confidence 9999999999999999997643 245678888743
No 18
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=99.39 E-value=4.8e-12 Score=140.00 Aligned_cols=130 Identities=21% Similarity=0.246 Sum_probs=107.0
Q ss_pred CCCHHHHHHHHHHHHccCC------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccc
Q 005613 83 GFSELEAMKHVKALTQLGP------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~igp------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~ 156 (688)
+.+.+|+++.+++|++++. |+..++++.++++||.++|++.| ++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~-------------------- 59 (412)
T PRK12892 6 RIDGQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAG------LAVRID-------------------- 59 (412)
T ss_pred cccHHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcC------CEEEEc--------------------
Confidence 3467899999999999864 35567777799999999999998 334432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 005613 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (688)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (688)
+..|++++++|+ . +.+.|++++|+||||. .|-.|+..|+|++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 60 ----~~~nl~a~~~g~---~-~~~~l~l~gH~DtVp~-~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~ 130 (412)
T PRK12892 60 ----GIGNVFGRLPGP---G-PGPALLVGSHLDSQNL-GGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGS 130 (412)
T ss_pred ----CCCcEEEEecCC---C-CCCeEEEEccccCCCC-CCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccc
Confidence 235999999875 1 2378999999999995 36679999999999999999998888999999999999998
Q ss_pred ----CCCChHHHHhcC
Q 005613 236 ----GLNGAHSFVTQH 247 (688)
Q Consensus 236 ----gl~GS~~f~~~h 247 (688)
++.|++.++.++
T Consensus 131 ~~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 131 RFTPGFLGSRAYAGRL 146 (412)
T ss_pred cccCccccHHHHHcCC
Confidence 468999998544
No 19
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=99.39 E-value=4.3e-12 Score=140.49 Aligned_cols=130 Identities=19% Similarity=0.219 Sum_probs=106.8
Q ss_pred CCHHHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccc
Q 005613 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (688)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~ 156 (688)
.+.++++++|++|+++.. |..+|.++.++.+||.++|++.| ++++++
T Consensus 7 ~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G------~~~~~~-------------------- 60 (412)
T PRK12893 7 INGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAG------LTVSVD-------------------- 60 (412)
T ss_pred cCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcC------CEEEEc--------------------
Confidence 467899999999999863 33457777899999999999998 334431
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 005613 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (688)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g 236 (688)
...|++++++|. .++.+.|++++|+|+||. .|..|++.|+|++|++++.|.+.+.+++++|.|+|+.+||.|
T Consensus 61 ----~~~n~~a~~~g~---~~~~~~l~l~~H~DtVp~-~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 132 (412)
T PRK12893 61 ----AIGNLFGRRAGT---DPDAPPVLIGSHLDTQPT-GGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGA 132 (412)
T ss_pred ----CCCcEEEEeCCC---CCCCCEEEEEecccCCCC-CCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEcccccc
Confidence 234999999774 224578999999999994 567899999999999999999988788999999999999986
Q ss_pred -----CCChHHHHhcC
Q 005613 237 -----LNGAHSFVTQH 247 (688)
Q Consensus 237 -----l~GS~~f~~~h 247 (688)
+.|+..+..++
T Consensus 133 ~~~~~~~G~~~~~~~~ 148 (412)
T PRK12893 133 RFAPAMLGSGVFTGAL 148 (412)
T ss_pred ccccccccHHHHhCcC
Confidence 78999888544
No 20
>PRK07473 carboxypeptidase; Provisional
Probab=99.39 E-value=1.1e-11 Score=136.24 Aligned_cols=149 Identities=19% Similarity=0.210 Sum_probs=113.5
Q ss_pred CCHHHHHHHHHHHHccCCCCCCCHHH-HHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 005613 84 FSELEAMKHVKALTQLGPHAVGSDAL-DRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (688)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~~-~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (688)
++.+++.+.|++|.+|. -+.+.+++ .+..+|+.++|+++| ++++.. ....| ..
T Consensus 8 ~~~~~~~~~l~~Lv~i~-S~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~--~~~~~-----------------~~ 61 (376)
T PRK07473 8 FDSEAMLAGLRPWVECE-SPTWDAAAVNRMLDLAARDMAIMG------ATIERI--PGRQG-----------------FG 61 (376)
T ss_pred cCHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHcC------CeEEEe--cCCCC-----------------CC
Confidence 56899999999999973 34444443 478889999999998 334432 11100 12
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCCCcCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005613 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (688)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-----------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I 225 (688)
.|+++++++. ....+.|++++|+|+||. ++|+.|+++|+|++|.+++.|.+.+.+++.+|
T Consensus 62 ~~~~~~~~~~---~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v 138 (376)
T PRK07473 62 DCVRARFPHP---RQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPI 138 (376)
T ss_pred CeEEEEeCCC---CCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCE
Confidence 5899988653 224578999999999952 48999999999999999999988776667789
Q ss_pred EEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCc
Q 005613 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
.|+|+.+||.|..|++.+++++.. ...++|..|..+
T Consensus 139 ~~~~~~dEE~g~~g~~~~~~~~~~--~~d~~iv~ep~~ 174 (376)
T PRK07473 139 TVLFTPDEEVGTPSTRDLIEAEAA--RNKYVLVPEPGR 174 (376)
T ss_pred EEEEeCCcccCCccHHHHHHHhhc--cCCEEEEeCCCC
Confidence 999999999999999999965432 346788888654
No 21
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.36 E-value=9.9e-12 Score=135.83 Aligned_cols=140 Identities=19% Similarity=0.257 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
++++.+.|++|.++ |-+.+ ++.++.+||.++|+++|. +++.+ ... ....|+
T Consensus 1 ~~~~~~~l~~Lv~i-~s~s~--~e~~~~~~l~~~l~~~G~------~~~~~--~~~------------------~~~~~l 51 (377)
T PRK08588 1 EEEKIQILADIVKI-NSVND--NEIEVANYLQDLFAKHGI------ESKIV--KVN------------------DGRANL 51 (377)
T ss_pred ChHHHHHHHHHhcC-CCCCC--cHHHHHHHHHHHHHHCCC------ceEEE--ecC------------------CCCceE
Confidence 36788999999986 33333 346899999999999983 34332 110 034699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
++++ |. .++.|++.+|+|+||. ++|+.|++.|+|++|++++.|.+.+.+++.+
T Consensus 52 ~a~~-g~-----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 125 (377)
T PRK08588 52 VAEI-GS-----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGT 125 (377)
T ss_pred EEEe-CC-----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCc
Confidence 9988 32 1278999999999985 3789999999999999999999888788899
Q ss_pred EEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeec
Q 005613 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
|.|+|..+||.|..|++.++++ ...++...++..|.
T Consensus 126 i~l~~~~dEE~g~~G~~~~~~~-~~~~~~d~~i~~ep 161 (377)
T PRK08588 126 IRLLATAGEEVGELGAKQLTEK-GYADDLDALIIGEP 161 (377)
T ss_pred EEEEEEcccccCchhHHHHHhc-CccCCCCEEEEecC
Confidence 9999999999999999999954 33345556666664
No 22
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.35 E-value=1.1e-11 Score=135.45 Aligned_cols=145 Identities=15% Similarity=0.199 Sum_probs=106.0
Q ss_pred HHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 005613 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (688)
Q Consensus 91 ~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (688)
+.|++|.++......+.++.++.+||.++|+++|. +++.. ....+ . .....|+++.+.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~------~~~~~--~~~~~-----------~---~~~~~~~~~~~~ 59 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGF------STDVI--EITDD-----------R---LKVLGKVVVKEP 59 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCC------ceEEE--ecCch-----------h---cccccceEEecc
Confidence 46778888633221345567899999999999983 33332 11100 0 012346777776
Q ss_pred CCCCCCCCCCeEEEeecCCCcCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005613 171 PKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (688)
Q Consensus 171 g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf 229 (688)
|+ .+.+.|++.+|+|+||.. +|+.|+++|+|++|++++.|.+.+.+++++|.|+|
T Consensus 60 g~----~~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 135 (375)
T TIGR01910 60 GN----GNEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQS 135 (375)
T ss_pred CC----CCCCEEEEecccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEE
Confidence 63 235789999999999863 68999999999999999999988777889999999
Q ss_pred eCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 230 NTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
+.+||.|..|++.++++. ..++...+++.|..
T Consensus 136 ~~~EE~g~~G~~~~~~~~-~~~~~d~~i~~~~~ 167 (375)
T TIGR01910 136 VVDEESGEAGTLYLLQRG-YFKDADGVLIPEPS 167 (375)
T ss_pred EcCcccCchhHHHHHHcC-CCCCCCEEEECCCC
Confidence 999999999999999542 33345677777754
No 23
>PRK07906 hypothetical protein; Provisional
Probab=99.34 E-value=1.1e-11 Score=138.01 Aligned_cols=130 Identities=25% Similarity=0.362 Sum_probs=100.4
Q ss_pred HHHHHHHHccCCCCC---CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 90 MKHVKALTQLGPHAV---GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 90 ~~~L~~L~~igpr~~---GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
.+.|++|.+|..... ..++++++.+||.++++++|. +++.+ ... .+..|++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~------~~~~~--~~~------------------~~~~nv~ 55 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGL------EPTYL--ESA------------------PGRANVV 55 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCC------CeEEe--ecC------------------CCceEEE
Confidence 467788888643221 124566899999999999983 34432 110 1347999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~ 226 (688)
++++|+ ++..+.|++++|+|+||. ++|+.||++|++++|++++.+.+.+.+++++|.
T Consensus 56 ~~~~g~---~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~ 132 (426)
T PRK07906 56 ARLPGA---DPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLV 132 (426)
T ss_pred EEEeCC---CCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEE
Confidence 999764 234578999999999985 389999999999999999999998888899999
Q ss_pred EEEeCCCCCCC-CChHHHHhcCC
Q 005613 227 FLFNTGEEEGL-NGAHSFVTQHP 248 (688)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~~h~ 248 (688)
|+|+.+||.|. .|++.++++++
T Consensus 133 ~~~~~dEE~g~~~g~~~l~~~~~ 155 (426)
T PRK07906 133 FAFVADEEAGGTYGAHWLVDNHP 155 (426)
T ss_pred EEEecCcccchhhhHHHHHHHHH
Confidence 99999999965 69999986553
No 24
>PRK07338 hypothetical protein; Provisional
Probab=99.32 E-value=3.1e-11 Score=133.19 Aligned_cols=157 Identities=18% Similarity=0.238 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHccCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 005613 86 ELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
.++..+.|++|.++. -..+. ++..++.+||.++|+++|. ++++. ... +.... ...+....+....|
T Consensus 16 ~~~~~~~l~~lv~i~-S~s~~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~~-~~~~~---~~~~~~~~~~~~~n 82 (402)
T PRK07338 16 QAPMLEQLIAWAAIN-SGSRNLDGLARMAELLADAFAALPG------EIELI--PLP-PVEVI---DADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHhCCC------cEEEe--cCC-ccccc---cccccccccCcCCe
Confidence 467788899998863 22223 2345799999999999983 33332 110 00000 00011001123479
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~-----------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~f 227 (688)
++++++++ .++.|++++|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.+|.|
T Consensus 83 l~a~~~~~-----~~~~lll~gH~DvVp~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~ 157 (402)
T PRK07338 83 LHVSVRPE-----APRQVLLTGHMDTVFPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDV 157 (402)
T ss_pred EEEEECCC-----CCccEEEEeecCccCCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99999653 2246999999999974 3789999999999999999998877677889999
Q ss_pred EEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 228 lf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
+|..+||.|..|++.+++++.. +..+.+.+|..
T Consensus 158 ~~~~dEE~g~~g~~~~~~~~~~--~~~~~i~~ep~ 190 (402)
T PRK07338 158 LINPDEEIGSPASAPLLAELAR--GKHAALTYEPA 190 (402)
T ss_pred EEECCcccCChhhHHHHHHHhc--cCcEEEEecCC
Confidence 9999999999999999976542 34567777753
No 25
>PRK09104 hypothetical protein; Validated
Probab=99.32 E-value=3.1e-11 Score=135.99 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHHHccCCCCCCCH----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (688)
..+++.+.|++|.+|.. ..+.+ +..++.+||.++++++| +++++. ...
T Consensus 15 ~~~~~~~~L~~lv~i~S-vs~~~~~~~~~~~~~~~l~~~l~~~G------~~v~~~--~~~------------------- 66 (464)
T PRK09104 15 NLDASLERLFALLRIPS-ISTDPAYAADCRKAADWLVADLASLG------FEASVR--DTP------------------- 66 (464)
T ss_pred hHHHHHHHHHHHhcCCC-CCCCccchHHHHHHHHHHHHHHHHCC------CeEEEE--ecC-------------------
Confidence 45788899999998743 22222 23578999999999998 334332 110
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC--------------------------CCCCCCChhHHHHHHHHHHHH
Q 005613 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------------GEGAGDCSSCVAVMLELARVM 214 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------------spGA~Dd~sGvA~~LE~ar~L 214 (688)
+..||++++.|+ ++..+.|++++|+|+||. ++|+.||+.|+|++|++++.|
T Consensus 67 ~~~~l~a~~~g~---~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l 143 (464)
T PRK09104 67 GHPMVVAHHEGP---TGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAW 143 (464)
T ss_pred CCCEEEEEecCC---CCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHH
Confidence 236999999764 234678999999999863 268899999999999999999
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeec
Q 005613 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 215 ~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
.+.+.+++.+|.|+|.++||.|..|...++.+.....+..++|+.|.
T Consensus 144 ~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~ 190 (464)
T PRK09104 144 KAVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDT 190 (464)
T ss_pred HHhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCC
Confidence 98765677899999999999999999999865432234577888883
No 26
>PRK07907 hypothetical protein; Provisional
Probab=99.32 E-value=3.7e-11 Score=134.87 Aligned_cols=145 Identities=18% Similarity=0.227 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHHHccCCCCCCC----HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGS----DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS----~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (688)
..+++.+.|++|.+|.. +.+. .+.+++.+||.++|+++|. .+++.. .. .
T Consensus 16 ~~~~~~~ll~~LV~ipS-~s~~~~~~~~~~~~~~~l~~~l~~~g~-----~~~~~~--~~-------------------~ 68 (449)
T PRK07907 16 LLPRVRADLEELVRIPS-VAADPFRREEVARSAEWVADLLREAGF-----DDVRVV--SA-------------------D 68 (449)
T ss_pred HHHHHHHHHHHHhcCCC-CCCCccchhhHHHHHHHHHHHHHHcCC-----ceEEEE--ec-------------------C
Confidence 34778899999999743 2221 2235789999999999982 023321 11 1
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 005613 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAH 219 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~ 219 (688)
...|++++++++ ++.+.|++++|+|+||. ++|+.|+++|+|++|++++.| +.
T Consensus 69 ~~~nl~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~ 141 (449)
T PRK07907 69 GAPAVIGTRPAP----PGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GG 141 (449)
T ss_pred CCCEEEEEecCC----CCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---cc
Confidence 346999999763 24578999999999985 279999999999999999999 23
Q ss_pred CCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCc
Q 005613 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 220 ~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
+++++|.|+++++||.|..|++.+++++....+..+++..|..+
T Consensus 142 ~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~ 185 (449)
T PRK07907 142 DLPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSGN 185 (449)
T ss_pred CCCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCCc
Confidence 56789999999999999999999997654333446677767533
No 27
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.31 E-value=3.6e-11 Score=132.68 Aligned_cols=147 Identities=17% Similarity=0.234 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 005613 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (688)
..-.+++.+.|++|.+|... .++.++.++.+|+.++++++|. +++. +... ...
T Consensus 5 ~~~~~~~~~~l~~lv~ipS~-~~~~~~~~~~~~l~~~l~~~G~------~~~~--~~~~------------------~g~ 57 (400)
T TIGR01880 5 KWEEDIAVTRFREYLRINTV-QPNPDYAACVDFLIKQADELGL------ARKT--IEFV------------------PGK 57 (400)
T ss_pred ccchHHHHHHHHHHhccCcc-CCCccHHHHHHHHHHHHHhCCC------ceeE--EEec------------------CCc
Confidence 45678999999999997433 2333346899999999999983 3322 1110 024
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005613 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (688)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p 221 (688)
.|++++++|+ ++..+.|++.+|+|+||. ++|+.|+++++|++|++++.|.+.+.++
T Consensus 58 ~~l~~~~~g~---~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~ 134 (400)
T TIGR01880 58 PVVVLTWPGS---NPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKF 134 (400)
T ss_pred eeEEEEEecC---CCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCC
Confidence 6899999764 223478999999999984 2789999999999999999999887778
Q ss_pred CCcEEEEEeCCCCCCC-CChHHHHhcCCccCCccEEEEee
Q 005613 222 KNAVIFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 222 ~~~I~flf~~~EE~gl-~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
+++|.|+|..+||.|. .|++.++++. ..+.+...+.+|
T Consensus 135 ~~~v~l~~~~dEE~g~~~G~~~~~~~~-~~~~~~~~~~~d 173 (400)
T TIGR01880 135 KRTIHISFVPDEEIGGHDGMEKFAKTD-EFKALNLGFALD 173 (400)
T ss_pred CceEEEEEeCCcccCcHhHHHHHHHhh-hccCCceEEEEc
Confidence 8999999999999976 5999998542 223345556554
No 28
>PRK06446 hypothetical protein; Provisional
Probab=99.30 E-value=3.5e-11 Score=134.55 Aligned_cols=137 Identities=14% Similarity=0.210 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHccCCCCCCCH-HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 87 LEAMKHVKALTQLGPHAVGSD-ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~-~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
+++.+.|++|.+|.. +.+.. +.+++.+||.+.|+++| ++++.+ ... +..|+
T Consensus 2 ~~~~~~l~eLV~i~S-~s~~~~~~~~~a~~l~~~l~~~G------~~ve~~--~~~-------------------~~~~l 53 (436)
T PRK06446 2 DEELYTLIEFLKKPS-ISATGEGIEETANYLKDTMEKLG------IKANIE--RTK-------------------GHPVV 53 (436)
T ss_pred hhHHHHHHHHhCCCC-CCCCcHhHHHHHHHHHHHHHHCC------CeEEEE--ecC-------------------CCCEE
Confidence 567889999999743 22322 23689999999999998 344432 110 24699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
++++++. +.+.|++++|+|+||. ++|+.|+++|+|++|.+++.+.+.+ .++.+
T Consensus 54 ia~~~~~-----~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~ 127 (436)
T PRK06446 54 YGEINVG-----AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVN 127 (436)
T ss_pred EEEecCC-----CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCC
Confidence 9998531 3468999999999874 3899999999999999999987654 56789
Q ss_pred EEEEEeCCCCCCCCChHHHHhcCCccCCccEEE
Q 005613 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAV 257 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~i 257 (688)
|.|+|..+||.|..|++.++++++...+..++|
T Consensus 128 i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 128 VKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred EEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999997765322234444
No 29
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.29 E-value=6.2e-11 Score=130.13 Aligned_cols=149 Identities=19% Similarity=0.218 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHccCCCCCCC---HHHHHHHHHHHHHHHhhccccCCcce-EEEEeeeccCCCcccccccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS---~~~~~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (688)
+++.+.|++|.++..- .+. .++.++.+||.++|+++|- + ++.. ...+.. ......
T Consensus 5 ~~~~~~l~~lv~i~s~-s~~~~~~~e~~~~~~l~~~l~~~G~------~~~~~~--~~~~~~------------~~~~~~ 63 (400)
T PRK13983 5 DEMIELLSELIAIPAV-NPDFGGEGEKEKAEYLESLLKEYGF------DEVERY--DAPDPR------------VIEGVR 63 (400)
T ss_pred HHHHHHHHHHhCcCCC-CCCCCCccHHHHHHHHHHHHHHcCC------ceEEEE--ecCCcc------------cccCCC
Confidence 5788999999987432 211 2356889999999999983 2 3221 110000 000025
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005613 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (688)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p 221 (688)
.|++++++|. .+.+.|++++|+|+||. ++|+.||+.|++++|++++.|.+.+.++
T Consensus 64 ~nl~~~~~g~----~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~ 139 (400)
T PRK13983 64 PNIVAKIPGG----DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRP 139 (400)
T ss_pred ccEEEEecCC----CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCC
Confidence 8999999764 23458999999999985 3789999999999999999999887788
Q ss_pred CCcEEEEEeCCCCCCCC-ChHHHHhcCCc-cCCccEEEEee
Q 005613 222 KNAVIFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAVDLE 260 (688)
Q Consensus 222 ~~~I~flf~~~EE~gl~-GS~~f~~~h~~-~~~v~a~iNLD 260 (688)
+.+|.|+|..+||.|.. |++.++++++. .....+++..|
T Consensus 140 ~~~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~ 180 (400)
T PRK13983 140 KYNLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPD 180 (400)
T ss_pred CCcEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEec
Confidence 99999999999999884 89999866432 22344555544
No 30
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=99.28 E-value=8.1e-11 Score=121.30 Aligned_cols=167 Identities=21% Similarity=0.303 Sum_probs=116.3
Q ss_pred CeEEEeecCCCcC----CCCCCCCChhHHHHHHHHHHHHHhc---CCCCCCcEEEEEeCCCCCCCCChHHHHhcC-----
Q 005613 180 NAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQW---AHEFKNAVIFLFNTGEEEGLNGAHSFVTQH----- 247 (688)
Q Consensus 180 ~~VLl~AH~DSv~----~spGA~Dd~sGvA~~LE~ar~L~~~---~~~p~~~I~flf~~~EE~gl~GS~~f~~~h----- 247 (688)
|.|++.|.+||.. .+|||+++.+|++++|++++.|.+. ....+++|+|+|+.||..|..||+.|+.+.
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f 80 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNF 80 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcC
Confidence 5799999999953 4799999999999999999999875 235789999999999999999999998642
Q ss_pred C--------c-cCCccEEEEeecCcCCCCcceecc--CC--C---HHHHHHHHHHccCCCC--cccccccccCCCCCCCC
Q 005613 248 P--------W-STTIRVAVDLEAMGIGGRSALFQA--GP--N---LWAVENFAAVAKYPSG--QIIGQDLFASGVFETAT 309 (688)
Q Consensus 248 ~--------~-~~~v~a~iNLD~~G~gg~~~lfqt--g~--~---~~li~~~~~aa~~P~~--~~l~~e~f~~g~ips~T 309 (688)
| . .++|..+|.++.+|......++.- ++ + ..+.+...+..+.+.. ....+..=....+|..+
T Consensus 81 ~~~~~~~~~i~~~~I~~~IElgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~LPPsS 160 (234)
T PF05450_consen 81 PSDSLQFQPISLDNIDSVIELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAKSLASSNIVIKKASSSNPPLPPSS 160 (234)
T ss_pred cccccccccccHHHCCEEEEeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHHhccccccceeccccCCCCCCcch
Confidence 2 1 158999999999998765334331 21 1 2233333332222211 11111111123577767
Q ss_pred chHHhhhcCCCeEEEEeeeCC---CCCCCCcCCccCCCCH
Q 005613 310 DFQVYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKP 346 (688)
Q Consensus 310 D~~~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~id~ 346 (688)
=++..++..++||+-++-.+. ..+||+.+|+.++++.
T Consensus 161 ~~sFLr~~~~i~~vVLtd~~~~f~N~~y~S~~D~~~ni~~ 200 (234)
T PF05450_consen 161 LQSFLRKDPNIPGVVLTDHDSQFTNKYYNSILDDAENINF 200 (234)
T ss_pred HHHHHccCCCCCEEEecCCCcccccCCccCcccChhhhcC
Confidence 555555545899998886544 3469999999998876
No 31
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.28 E-value=8.5e-11 Score=130.62 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHccCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 005613 86 ELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
.+++.+.+++|.++.. .... .++.++.+||.++|+++|. +++.+......+ . ..+....|
T Consensus 13 ~~~~~~~l~~Lv~i~S-~~~~g~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~~-----------~-~~~~~~~n 73 (427)
T PRK13013 13 RDDLVALTQDLIRIPT-LNPPGRAYREICEFLAARLAPRGF------EVELIRAEGAPG-----------D-SETYPRWN 73 (427)
T ss_pred HHHHHHHHHHHhcCCC-cCCCCccHHHHHHHHHHHHHHCCC------ceEEEecCCCCc-----------c-cccCCcce
Confidence 3678888999998732 2111 2335899999999999983 344321100000 0 01123579
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I 225 (688)
++++++|+ .+++.|++.+|+|+||. ++|+.|+++|+|++|.+++.|.+.+.+++.+|
T Consensus 74 lia~~~g~----~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v 149 (427)
T PRK13013 74 LVARRQGA----RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSI 149 (427)
T ss_pred EEEEecCC----CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccE
Confidence 99999764 23478999999999985 27999999999999999999998877788999
Q ss_pred EEEEeCCCCCCCC-ChHHHHhcCCccC--CccEEEEeecC
Q 005613 226 IFLFNTGEEEGLN-GAHSFVTQHPWST--TIRVAVDLEAM 262 (688)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~h~~~~--~v~a~iNLD~~ 262 (688)
.|+|..+||.|.. |.+.++ +....+ +..++|..|..
T Consensus 150 ~~~~~~dEE~g~~~g~~~l~-~~~~~~~~~~d~~i~~ep~ 188 (427)
T PRK13013 150 EISGTADEESGGFGGVAYLA-EQGRFSPDRVQHVIIPEPL 188 (427)
T ss_pred EEEEEeccccCChhHHHHHH-hcCCccccCCCEEEEecCC
Confidence 9999999999876 555555 333222 45677776643
No 32
>PRK08201 hypothetical protein; Provisional
Probab=99.27 E-value=6.7e-11 Score=132.98 Aligned_cols=148 Identities=18% Similarity=0.205 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHHccCCCCCCC---HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS---~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
..+++.+.|++|.+|..-...+ .++.++.+||.++|++++.+ .++++ .. .+
T Consensus 12 ~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~--~~-------------------~~ 65 (456)
T PRK08201 12 RREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLE-----HVEIM--ET-------------------AG 65 (456)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCC-----eEEEE--ec-------------------CC
Confidence 3477889999999874322111 23457899999999999821 13332 11 02
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~ 220 (688)
..||++++.+. ++.+.|++++|+|+||. ++|+.|+++|+|++|++++.+.+.+..
T Consensus 66 ~~~l~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~ 141 (456)
T PRK08201 66 HPIVYADWLHA----PGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGT 141 (456)
T ss_pred CCEEEEEecCC----CCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCC
Confidence 35899988653 24578999999999874 389999999999999999999876556
Q ss_pred CCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 221 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
++.+|.|++..+||.|..|+..++++++..-...++|+.|..
T Consensus 142 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~ii~e~~ 183 (456)
T PRK08201 142 LPVNVKFCIEGEEEIGSPNLDSFVEEEKDKLAADVVLISDTT 183 (456)
T ss_pred CCCCEEEEEEcccccCCccHHHHHHhhHHhccCCEEEEeCCC
Confidence 778999999999999999999999765322223567777644
No 33
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.27 E-value=5.4e-11 Score=134.67 Aligned_cols=136 Identities=17% Similarity=0.307 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
.+|+++.|++|.++ |++ |.+++++++|+.+++++.| ++++.+ ...|+
T Consensus 3 ~~~~~~~l~~l~~i-~s~--s~~e~~~~~~l~~~l~~~G------~~~~~~------------------------~~~n~ 49 (477)
T TIGR01893 3 PSRVFKYFEEISKI-PRP--SKNEKEVSNFIVNWAKKLG------LEVKQD------------------------EVGNV 49 (477)
T ss_pred HHHHHHHHHHHHcC-CCC--CccHHHHHHHHHHHHHHcC------CeEEEe------------------------CCCeE
Confidence 47899999999998 565 4556689999999999998 344432 23699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCCC------------------------CCCC---CChhHHHHHHHHHHHHHhcC
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMSQWA 218 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------------pGA~---Dd~sGvA~~LE~ar~L~~~~ 218 (688)
+++++|+. +.++.+.|++++|+|+||.. +|+. |++.|++++|++++. .+
T Consensus 50 ~~~~~~~~-g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~ 125 (477)
T TIGR01893 50 LIRKPATP-GYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN 125 (477)
T ss_pred EEEEcCCC-CCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC
Confidence 99998742 12345789999999999842 5653 999999999999875 22
Q ss_pred CCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
.++++|.++|+.+||.|+.||+.+..+. .....++|.|..
T Consensus 126 -~~~~~i~~~~~~dEE~g~~Gs~~l~~~~---~~~~~~~~~d~~ 165 (477)
T TIGR01893 126 -LKHPPLELLFTVDEETGMDGALGLDENW---LSGKILINIDSE 165 (477)
T ss_pred -CCCCCEEEEEEeccccCchhhhhcChhh---cCCcEEEEecCC
Confidence 3566999999999999999999997422 233678888854
No 34
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.25 E-value=6.4e-10 Score=120.44 Aligned_cols=226 Identities=19% Similarity=0.250 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
+...+.|++|+++ +-+.|.+ +++++|++++|++++. +++.| +..|++
T Consensus 2 ~~~~~~LkeL~~~-~gpsG~E--~eVr~~~~~el~~~~~------ev~~D------------------------~lGnli 48 (355)
T COG1363 2 EELLELLKELLEA-PGPSGYE--EEVRDVLKEELEPLGD------EVEVD------------------------RLGNLI 48 (355)
T ss_pred hHHHHHHHHHHcC-CCCCCcH--HHHHHHHHHHHHHhCC------ceEEc------------------------CCCcEE
Confidence 3567889999985 5555644 4689999999999983 34443 568999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCCC----------------------------------------------------
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------------------------------------- 194 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------------------------------------- 194 (688)
++++|+ ...+.|++.||+|.+..-
T Consensus 49 a~~~g~----~g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~ 124 (355)
T COG1363 49 AKKGGK----NGPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKE 124 (355)
T ss_pred EEecCC----CCCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCc
Confidence 999884 233559999999987630
Q ss_pred -------------------------------CC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005613 195 -------------------------------EG--------------------AGDCSSCVAVMLELARVMSQWAHEFKN 223 (688)
Q Consensus 195 -------------------------------pG--------------------A~Dd~sGvA~~LE~ar~L~~~~~~p~~ 223 (688)
+| |-||..||+++||++|.| + +..++.
T Consensus 125 ~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~ 202 (355)
T COG1363 125 EAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPA 202 (355)
T ss_pred cccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCc
Confidence 22 789999999999999999 4 568899
Q ss_pred cEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcCCCCc--------------ceec--cCC-CHHHHHHHHHH
Q 005613 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS--------------ALFQ--AGP-NLWAVENFAAV 286 (688)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gg~~--------------~lfq--tg~-~~~li~~~~~a 286 (688)
+++|+|+.-||.|+.||+..+.+ -+...+|.+|..+++... +... +++ ++.+.+...+.
T Consensus 203 ~vy~v~tvqEEVGlrGA~~~a~~----i~pd~aiavd~~~~~d~~~~~~~~~~lg~Gp~i~~~D~~~~~~~~l~~~L~~~ 278 (355)
T COG1363 203 DVYFVASVQEEVGLRGAKTSAFR----IKPDIAIAVDVTPAGDTPGVPKGDVKLGKGPVIRVKDASGIYHPKLRKFLLEL 278 (355)
T ss_pred eEEEEEecchhhccchhhccccc----cCCCEEEEEecccccCCCCCcccccccCCCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 99999999999999999987732 234678888877765431 1121 223 57777766555
Q ss_pred ccCCCCcccccccccCCCCCCCCchHHhhhc-CCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhc
Q 005613 287 AKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (688)
Q Consensus 287 a~~P~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~ 365 (688)
|+. .+-....++++. .+||-..+... .|+|...++..-. +-|+++ +.++.+.+.++.+.+.+++..+..
T Consensus 279 A~~-~~Ip~Q~~v~~~----ggTDA~a~~~~g~gvpta~Igip~r--y~Hs~~---e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 279 AEK-NNIPYQVDVSPG----GGTDAGAAHLTGGGVPTALIGIPTR--YIHSPV---EVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred HHH-cCCCeEEEecCC----CCccHHHHHHcCCCCceEEEecccc--cccCcc---eeecHHHHHHHHHHHHHHHHhcch
Confidence 421 111111233321 57888887652 5799988764322 257754 567788888888888777776544
No 35
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.25 E-value=9.2e-11 Score=127.26 Aligned_cols=134 Identities=22% Similarity=0.240 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 005613 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
-++++.+.+++|.++. -+. ..+.++.+|+.++++++|. +++.+ +..|
T Consensus 4 ~~~~~~~~l~~Lv~i~-s~s--~~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~~n 50 (348)
T PRK04443 4 SALEARELLKGLVEIP-SPS--GEEAAAAEFLVEFMESHGR------EAWVD------------------------EAGN 50 (348)
T ss_pred chHHHHHHHHHHHcCC-CCC--CChHHHHHHHHHHHHHcCC------EEEEc------------------------CCCc
Confidence 3578899999999973 333 3456899999999999982 34331 2358
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (688)
+++++.+ ..+.|++++|+|+||. ++|+.|+++|+|+++++++.| + .+++.+|.|++..+
T Consensus 51 ~i~~~~~------~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~--~~~~~~i~~~~~~d 121 (348)
T PRK04443 51 ARGPAGD------GPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-E--ALVRARVSFVGAVE 121 (348)
T ss_pred EEEEcCC------CCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-c--ccCCCCEEEEEEcc
Confidence 8998732 2368999999999974 489999999999999999999 3 46788999999999
Q ss_pred CCCCCCChHHHHhcCCccCCccEEEEeecCc
Q 005613 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
||.|..|...+..+.. ...++|+.|..+
T Consensus 122 EE~g~~~~~~~l~~~~---~~d~~iv~Ept~ 149 (348)
T PRK04443 122 EEAPSSGGARLVADRE---RPDAVIIGEPSG 149 (348)
T ss_pred cccCChhHHHHHHhcc---CCCEEEEeCCCC
Confidence 9999887777664432 356778777443
No 36
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.23 E-value=1.4e-10 Score=125.49 Aligned_cols=123 Identities=19% Similarity=0.223 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEeecCCC
Q 005613 111 RALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDT 190 (688)
Q Consensus 111 ~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DS 190 (688)
..++|+....+.++.. + +..... + ...+++.+++|+ +++.+.||+++|.|+
T Consensus 49 a~~~Fl~~~a~~l~l~------~--~~i~~~-----------------p-~~~~~l~T~~GS---~P~L~silL~SH~DV 99 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLT------V--QKIESE-----------------P-GKYVLLYTWLGS---DPELPSILLNSHTDV 99 (420)
T ss_pred HHHHHHHHHHHhcCCc------e--eEEEec-----------------C-ceeEEEEEeeCC---CCCccceeeeccccc
Confidence 7799999999998842 1 111111 1 256889999986 578899999999999
Q ss_pred cCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-CCChHHHHhcCC
Q 005613 191 VSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAHSFVTQHP 248 (688)
Q Consensus 191 v~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g-l~GS~~f~~~h~ 248 (688)
||. ++|+.|+++-++++||++|.|..+|.+|+|+|.+.|..+||.| ..|++.|++ +.
T Consensus 100 VP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~-~~ 178 (420)
T KOG2275|consen 100 VPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAK-TE 178 (420)
T ss_pred cCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhh-hh
Confidence 986 4899999999999999999999999999999999999999987 689999994 44
Q ss_pred ccCCccEEEEeecCc
Q 005613 249 WSTTIRVAVDLEAMG 263 (688)
Q Consensus 249 ~~~~v~a~iNLD~~G 263 (688)
..++....+.+|--|
T Consensus 179 ~~~~l~~~filDEG~ 193 (420)
T KOG2275|consen 179 EFKKLNLGFILDEGG 193 (420)
T ss_pred hhcccceeEEecCCC
Confidence 444455555555444
No 37
>PRK05469 peptidase T; Provisional
Probab=99.23 E-value=1.6e-10 Score=128.01 Aligned_cols=127 Identities=14% Similarity=0.203 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHccCCCCCC------C-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHAVG------S-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~G------S-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y 159 (688)
+.+.+.|+++.+|..-... | ++++++.+||.++|+++|.+ .++++
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~----------------------- 53 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQ-----DVTLD----------------------- 53 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-----eEEEC-----------------------
Confidence 4567889999887432211 1 34578999999999999831 12221
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC----------------------------------------------
Q 005613 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------------------------------- 193 (688)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------------------------------- 193 (688)
...||+++++|+. +++.+.|++.+|+|+||.
T Consensus 54 -~~~~v~~~~~g~~--~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 130 (408)
T PRK05469 54 -ENGYVMATLPANV--DKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLIT 130 (408)
T ss_pred -CCeEEEEEecCCC--CCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEE
Confidence 2358999997741 234589999999999964
Q ss_pred CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHh
Q 005613 194 GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (688)
Q Consensus 194 spGA----~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (688)
++|+ .|+++|+|+++.+++.|.+.+..++.+|+|+|..+||.| .|++.++.
T Consensus 131 ~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g-~Ga~~~~~ 185 (408)
T PRK05469 131 TDGTTLLGADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIG-RGADKFDV 185 (408)
T ss_pred cCCCEeecccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccC-CCHHHhhh
Confidence 2365 999999999999999998876667789999999999998 89998863
No 38
>PRK07079 hypothetical protein; Provisional
Probab=99.23 E-value=1.7e-10 Score=130.22 Aligned_cols=149 Identities=14% Similarity=0.138 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHHHccCCCCCCCH-HHHHHHHHHH----HHHHhhccccCCcceEEEEeeeccCCCcccccccccccccc
Q 005613 84 FSELEAMKHVKALTQLGPHAVGSD-ALDRALQYVL----AASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (688)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~-~~~~a~~yL~----~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~ 158 (688)
++++++.+.|++|.+|.. ..+.+ ++....+|+. +.|++.| +++++ .....
T Consensus 14 ~~~~~~~~~L~~LV~ipS-vs~~~~~~~~~~~~l~~~~~~~l~~~G------~~~~~--~~~~~---------------- 68 (469)
T PRK07079 14 FDSGAFFADLARRVAYRT-ESQNPDRAPALRAYLTDEIAPALAALG------FTCRI--VDNPV---------------- 68 (469)
T ss_pred hccHHHHHHHHHHhccCC-CCCCcccHHHHHHHHHHHHHHHHHHCC------CeEEE--EecCC----------------
Confidence 455688999999999733 33322 2335566654 4677666 33333 22110
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC----------------------CCCCCCChhHHHHHHHHHHHHHh
Q 005613 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA----------------------GEGAGDCSSCVAVMLELARVMSQ 216 (688)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~----------------------spGA~Dd~sGvA~~LE~ar~L~~ 216 (688)
..+..||++++.+. .+.+.|++++|+|+||. ++|+.|+|+|+|++|++++.+.+
T Consensus 69 ~~~~~~vva~~~~~----~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~ 144 (469)
T PRK07079 69 AGGGPFLIAERIED----DALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLA 144 (469)
T ss_pred CCCCCEEEEEeCCC----CCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHH
Confidence 01347999998543 23578999999999973 28999999999999999999875
Q ss_pred c-CCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeec
Q 005613 217 W-AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 217 ~-~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
. +.+++.+|.|++..+||.|..|++.++++++......++|+.|.
T Consensus 145 ~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~ 190 (469)
T PRK07079 145 ARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIASDG 190 (469)
T ss_pred hcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEeCC
Confidence 4 46788999999999999999999999987643223456666553
No 39
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.22 E-value=2.1e-10 Score=128.04 Aligned_cols=145 Identities=19% Similarity=0.138 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
.+++.+.|++|.+|. - -|.++.++.+||.++|+++|. +++....... ......+ .......+.+..||
T Consensus 19 ~~~~~~~l~~li~ip-S--~s~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~nl 86 (427)
T PRK06837 19 FDAQVAFTQDLVRFP-S--TRGAEAPCQDFLARAFRERGY------EVDRWSIDPD-DLKSHPG--AGPVEIDYSGAPNV 86 (427)
T ss_pred hHHHHHHHHHHhccC-C--CCCcHHHHHHHHHHHHHHCCC------ceEEecCCHH-Hhhhccc--ccccccccCCCceE
Confidence 467778888998863 2 234456899999999999983 3332110000 0000000 00001122356899
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
+++++|+ .++.+.|++.+|+|+||.+ +|+.|+++|++++|.+++.+.+.+.+++++
T Consensus 87 ~a~~~g~---~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~ 163 (427)
T PRK06837 87 VGTYRPA---GKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAAR 163 (427)
T ss_pred EEEecCC---CCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999874 2345789999999999863 599999999999999999999888788999
Q ss_pred EEEEEeCCCCCCCCChHHHHh
Q 005613 225 VIFLFNTGEEEGLNGAHSFVT 245 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~ 245 (688)
|.|+|+.+||.+..|+...+.
T Consensus 164 i~~~~~~dEE~~g~g~~~~~~ 184 (427)
T PRK06837 164 VHFQSVIEEESTGNGALSTLQ 184 (427)
T ss_pred EEEEEEeccccCCHhHHHHHh
Confidence 999999999988888877663
No 40
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.21 E-value=1.6e-10 Score=125.56 Aligned_cols=128 Identities=27% Similarity=0.309 Sum_probs=98.3
Q ss_pred HHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 005613 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (688)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (688)
|.++.+++|.++. -+ |.++.++.+||.++|+++| ++++.+. ... .+.+..|+++
T Consensus 1 ~~~~~~~~l~~i~-s~--s~~e~~~~~~l~~~l~~~g------~~~~~~~--~~~---------------~~~~~~~~~~ 54 (361)
T TIGR01883 1 RLKKYFLELIQID-SE--SGKEKAILTYLKKQITKLG------IPVSLDE--VPA---------------EVSNDNNLIA 54 (361)
T ss_pred ChHHHHHHHeecC-CC--CCcHHHHHHHHHHHHHHcC------CEEEEec--ccc---------------ccCCCceEEE
Confidence 4678899999873 22 3445689999999999998 3333321 110 0113579999
Q ss_pred EEcCCCCCCCCCCeEEEeecCCCcCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005613 168 RILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (688)
Q Consensus 168 ~i~g~~~~~~~~~~VLl~AH~DSv~~--------------spGA----~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf 229 (688)
+++|+ .+.+.|++++|+|+||. ++|+ .|+++|+|++|++++.|.+.+ .++.+|.|+|
T Consensus 55 ~~~g~----~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~ 129 (361)
T TIGR01883 55 RLPGT----VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIF 129 (361)
T ss_pred EEeCC----CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEE
Confidence 99764 23478999999999984 3677 899999999999999998865 4678999999
Q ss_pred eCCCCCCCCChHHHHhc
Q 005613 230 NTGEEEGLNGAHSFVTQ 246 (688)
Q Consensus 230 ~~~EE~gl~GS~~f~~~ 246 (688)
+.+||.|..|++.+.+.
T Consensus 130 ~~~EE~g~~G~~~~~~~ 146 (361)
T TIGR01883 130 TVKEELGLIGMRLFDES 146 (361)
T ss_pred EcccccCchhHhHhChh
Confidence 99999999999988753
No 41
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.21 E-value=2.7e-10 Score=126.59 Aligned_cols=156 Identities=23% Similarity=0.250 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
.+++.+.+++|.++ |-+ |.++.++.+||.++|+++|. ++++. ....... .....+......+....|+
T Consensus 16 ~~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~nl 83 (422)
T PRK06915 16 EEEAVKLLKRLIQE-KSV--SGDESGAQAIVIEKLRELGL------DLDIW--EPSFKKL-KDHPYFVSPRTSFSDSPNI 83 (422)
T ss_pred HHHHHHHHHHHHhC-CCC--CcchHHHHHHHHHHHHhcCC------eeEEe--ecchhhh-hcccccCCcccccCCCceE
Confidence 36788999999986 333 44456889999999999983 33322 1110000 0000000000011245899
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
+++++|. .+.+.|++.+|+|+||. ++|+.|+++|++++|.+++.|.+.+.+++.+
T Consensus 84 ia~~~g~----~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 159 (422)
T PRK06915 84 VATLKGS----GGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGD 159 (422)
T ss_pred EEEEcCC----CCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999764 23478999999999985 2899999999999999999999887778889
Q ss_pred EEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEee
Q 005613 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
|.|++..+||.|..|+...+.+. . +...++.-|
T Consensus 160 v~~~~~~dEE~g~~G~~~~~~~~-~--~~d~~i~~e 192 (422)
T PRK06915 160 VIFQSVIEEESGGAGTLAAILRG-Y--KADGAIIPE 192 (422)
T ss_pred EEEEEecccccCCcchHHHHhcC-c--CCCEEEECC
Confidence 99999999999988988877432 2 234555555
No 42
>PRK13381 peptidase T; Provisional
Probab=99.20 E-value=2.4e-10 Score=126.50 Aligned_cols=125 Identities=17% Similarity=0.282 Sum_probs=95.7
Q ss_pred HHHHHHHHHccCCCCC-------CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 89 AMKHVKALTQLGPHAV-------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 89 A~~~L~~L~~igpr~~-------GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
+.+.+.++.+|..... .+++++++++||.++|+++|.+ .++++ .
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~-----~~~~~------------------------~ 53 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLE-----DIVID------------------------E 53 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCC-----cEEEc------------------------C
Confidence 5667778877633221 2345668999999999999831 11211 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCCC----------------------------------------------C
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG----------------------------------------------E 195 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s----------------------------------------------p 195 (688)
..||+++++|+ .+..+.|++++|+|+||.. +
T Consensus 54 ~~nvi~~~~g~---~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr 130 (404)
T PRK13381 54 HAIVTAKLPGN---TPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSD 130 (404)
T ss_pred CeEEEEEEecC---CCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCC
Confidence 35999999764 2234889999999999743 4
Q ss_pred CC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhc
Q 005613 196 GA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (688)
Q Consensus 196 GA----~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (688)
|+ .|+++|+|++|.+++.|.+.+ .++.+|.|+|..+||.|..|++.++.+
T Consensus 131 G~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 131 GTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHh
Confidence 67 999999999999999998764 457799999999999999999999744
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.19 E-value=2.1e-10 Score=129.51 Aligned_cols=127 Identities=15% Similarity=0.219 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHccCCCCCC---------CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccc
Q 005613 86 ELEAMKHVKALTQLGPHAVG---------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~G---------S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~ 156 (688)
.+++.+.|++|.+|..-..+ -+++.++.+|+.+.+++.| ++++.
T Consensus 13 ~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G------~~~~~--------------------- 65 (466)
T PRK07318 13 KDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDG------FKTKN--------------------- 65 (466)
T ss_pred HHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCC------CEEEE---------------------
Confidence 36778889999987542222 1234589999999999988 23321
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005613 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQW 217 (688)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~ 217 (688)
..|++++++.. ...+.|++++|+|+||. ++|+.|+++|+|+++.+++.|.+.
T Consensus 66 -----~~n~~~~~~~~----~~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~ 136 (466)
T PRK07318 66 -----VDNYAGHIEYG----EGEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKEL 136 (466)
T ss_pred -----ecCccceEEEC----CCCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHc
Confidence 12555555431 13367999999999985 389999999999999999999998
Q ss_pred CCCCCCcEEEEEeCCCCCCCCChHHHHhcCC
Q 005613 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (688)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (688)
+.+++.+|.|+|+.+||.|..|++.++++++
T Consensus 137 g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~ 167 (466)
T PRK07318 137 GLPLSKKVRFIVGTDEESGWKCMDYYFEHEE 167 (466)
T ss_pred CCCCCccEEEEEEcccccCchhHHHHHHhCC
Confidence 8888889999999999999999999997654
No 44
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.19 E-value=2.5e-10 Score=123.74 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=98.7
Q ss_pred HHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcC
Q 005613 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (688)
Q Consensus 92 ~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g 171 (688)
.|++|.+|. -+.+. ++.++.+||.++|+++| ++++.+ ....+ ....|+++++.+
T Consensus 2 ~l~~lv~i~-S~s~~-~~~~~~~~l~~~l~~~G------~~~~~~--~~~~~----------------~~~~nl~~~~~~ 55 (364)
T TIGR01892 2 ILTKLVAFD-STSFR-PNVDLIDWAQAYLEALG------FSVEVQ--PFPDG----------------AEKSNLVAVIGP 55 (364)
T ss_pred hHHHhhCcC-CcCCc-cHHHHHHHHHHHHHHcC------CeEEEE--eCCCC----------------CccccEEEEecC
Confidence 467788763 22232 23578999999999998 344433 11100 135799999854
Q ss_pred CCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005613 172 KYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (688)
Q Consensus 172 ~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~ 231 (688)
+ +.+.|++.+|+|+||. ++|+.|+++|+|++|.+++.|.+. +.+++|.|+|..
T Consensus 56 ~-----~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~ 128 (364)
T TIGR01892 56 S-----GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTA 128 (364)
T ss_pred C-----CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEe
Confidence 2 2467999999999975 389999999999999999999875 457899999999
Q ss_pred CCCCCCCChHHHHhcCCccCCccEEEEeec
Q 005613 232 GEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 232 ~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
+||.|..|++.++++... +...++..|.
T Consensus 129 ~EE~g~~G~~~~~~~~~~--~~d~~i~~ep 156 (364)
T TIGR01892 129 DEEVGCTGAPKMIEAGAG--RPRHAIIGEP 156 (364)
T ss_pred ccccCCcCHHHHHHhcCC--CCCEEEECCC
Confidence 999999999999966542 2334555454
No 45
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.19 E-value=3.3e-10 Score=122.54 Aligned_cols=133 Identities=27% Similarity=0.304 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhh-ccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKI-KESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~i-g~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
+++.+.+++|.++ |.+. .++.++.+||.++|+++ + .+++. ...|+
T Consensus 7 ~~~~~~l~~li~i-ps~s--~~e~~~~~~l~~~l~~~~~------~~~~~-------------------------~~~~~ 52 (352)
T PRK13007 7 ADLAELTAALVDI-PSVS--GDEKALADAVEAALRALPH------LEVIR-------------------------HGNSV 52 (352)
T ss_pred HHHHHHHHHHhcC-CCCC--chHHHHHHHHHHHHHhCcC------ceEEe-------------------------cCCeE
Confidence 6788999999986 4443 34568899999999986 4 22221 12489
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~ 231 (688)
++++.+. +.+.|++.+|+|+||. ++|+.|+++|+|++|.+++.|. +++++|.|+|.+
T Consensus 53 ~~~~~~~-----~~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~ 123 (352)
T PRK13007 53 VARTDLG-----RPSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYD 123 (352)
T ss_pred EEEccCC-----CCCeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEe
Confidence 9998432 1246999999999985 3899999999999999999993 367899999999
Q ss_pred CCCCCC--CChHHHHhcCCccCCccEEEEeecC
Q 005613 232 GEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 232 ~EE~gl--~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
+||.|. .|+..++.+++...+...+++.|..
T Consensus 124 ~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~ 156 (352)
T PRK13007 124 CEEVEAEANGLGRLAREHPEWLAGDFAILLEPT 156 (352)
T ss_pred cccccCCcccHHHHHHhcccccCCCEEEEecCC
Confidence 999865 5888888766544556788888853
No 46
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.19 E-value=3.6e-10 Score=128.25 Aligned_cols=138 Identities=16% Similarity=0.268 Sum_probs=105.9
Q ss_pred CCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 005613 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (688)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (688)
...++.++.+++|+++ |++.+. ++++.+|+.++++++| ++++.+ ...
T Consensus 7 ~~~~~~~~~l~~Lv~i-ps~S~~--e~~~~~~l~~~~~~~G------~~~~~d------------------------~~g 53 (485)
T PRK15026 7 LSPQPLWDIFAKICSI-PHPSYH--EEQLAEYIVGWAKEKG------FHVERD------------------------QVG 53 (485)
T ss_pred cCHHHHHHHHHHHhCC-CCCCCC--HHHHHHHHHHHHHhCC------CEEEEE------------------------ecC
Confidence 4578899999999997 666554 4589999999999998 344443 235
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCCCcCC------------------------CCCC---CCChhHHHHHHHHHHHHHh
Q 005613 164 HIVLRILPKYASEAGENAILVSSHIDTVSA------------------------GEGA---GDCSSCVAVMLELARVMSQ 216 (688)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~------------------------spGA---~Dd~sGvA~~LE~ar~L~~ 216 (688)
|++++.++.. +....+.|++.+|+|+|+. ++|+ .|+++|+|++|+++ .+
T Consensus 54 nvi~~~~~~~-g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~ 129 (485)
T PRK15026 54 NILIRKPATA-GMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---AD 129 (485)
T ss_pred eEEEEEcCCC-CCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---Hh
Confidence 8999886531 1134578999999999974 1777 49999999998876 33
Q ss_pred cCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 217 WAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 217 ~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
.+. +..+|.++|+.+||.|+.|++.+.. ...+.++++|+|..
T Consensus 130 ~~~-~~~~i~~l~t~dEE~G~~ga~~l~~---~~~~~~~~i~~e~~ 171 (485)
T PRK15026 130 ENV-VHGPLEVLLTMTEEAGMDGAFGLQS---NWLQADILINTDSE 171 (485)
T ss_pred CCC-CCCCEEEEEEcccccCcHhHHHhhh---ccCCcCEEEEeCCC
Confidence 333 3678999999999999999999863 22467899999975
No 47
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.19 E-value=2.9e-10 Score=124.48 Aligned_cols=141 Identities=17% Similarity=0.217 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
..+.+.|++|.+| |.+.+. ++.++.+||.++|+++|. +++.. .... ....|++
T Consensus 4 ~~~~~~l~~lv~i-~S~s~~-~~~~~~~~l~~~l~~~G~------~~~~~--~~~~-----------------~~~~nv~ 56 (385)
T PRK07522 4 MSSLDILERLVAF-DTVSRD-SNLALIEWVRDYLAAHGV------ESELI--PDPE-----------------GDKANLF 56 (385)
T ss_pred hhHHHHHHHHhCC-CCcCCC-ccHHHHHHHHHHHHHcCC------eEEEE--ecCC-----------------CCcccEE
Confidence 4578899999997 333332 224889999999999983 33331 1110 1347999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~ 226 (688)
+++.++ ..+.|++.+|+|+||. ++|+.|+++++|++|++++.|.+. +++++|.
T Consensus 57 a~~~~~-----~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~ 129 (385)
T PRK07522 57 ATIGPA-----DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLH 129 (385)
T ss_pred EEeCCC-----CCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEE
Confidence 998542 2468999999999974 389999999999999999999876 4678999
Q ss_pred EEEeCCCCCCCCChHHHHhcCCcc-CCccEEEEeec
Q 005613 227 FLFNTGEEEGLNGAHSFVTQHPWS-TTIRVAVDLEA 261 (688)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~-~~v~a~iNLD~ 261 (688)
|+|..+||.|..|++.++++.... .....++..|.
T Consensus 130 ~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ep 165 (385)
T PRK07522 130 LAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVGEP 165 (385)
T ss_pred EEEEeccccCCccHHHHHHHhhhcCCCCCEEEEccC
Confidence 999999999989999998653221 22455665554
No 48
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.18 E-value=1.1e-10 Score=114.32 Aligned_cols=165 Identities=23% Similarity=0.298 Sum_probs=117.0
Q ss_pred EEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCC-ChHH
Q 005613 183 LVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN-GAHS 242 (688)
Q Consensus 183 Ll~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~-GS~~ 242 (688)
|+.+|+|+||. ++|+.|++.++++++.+++.+.+.+.+++.+|+|+|+.+||.|.. |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999992 589999999999999999999988889999999999999999998 9999
Q ss_pred HHhcC-CccCCccEEEEeecCcCCCCcceeccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhh--cCC
Q 005613 243 FVTQH-PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE--VAG 319 (688)
Q Consensus 243 f~~~h-~~~~~v~a~iNLD~~G~gg~~~lfqtg~~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~--~~G 319 (688)
++++. ....+....+..|..+.+.-. +..++.+++...++.+...+... .....+..||...+.+ ..+
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~tD~~~~~~~~~~~ 151 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTGKGGVG----SDNDPPLVQALQAAAQEVGGEPP-----EPVASGGGTDAGFLAEVKGLG 151 (189)
T ss_dssp HHHHCEEEEEEESEEEECECETTSEEE----HCTCHHHHHHHHHHHHHTTSSEE-----EEEEESSSSTHHHHHCHHHTT
T ss_pred hhhhccccccccccccccccccccccc----ccccHHHHHHHHHHHHHHhhccc-----cccceeccccchhhhhhhccc
Confidence 99763 112336666666655433211 22356667766665433333111 1113467899999985 478
Q ss_pred CeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHH
Q 005613 320 LSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (688)
Q Consensus 320 iPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~ 361 (688)
+|.+.+.... ...|++. |+++.+.+....+.+..+++
T Consensus 152 ~~~i~~G~~~--~~~H~~~---E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 152 IPAIGFGPGG--SNAHTPD---EYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp EEEEEEESCE--ESTTSTT----EEEHHHHHHHHHHHHHHHH
T ss_pred cceeeeCCCC--CCCCCCC---cEecHHHHHHHHHHHHHHHh
Confidence 8888765444 4688865 45668888887777777654
No 49
>PRK07205 hypothetical protein; Provisional
Probab=99.17 E-value=3.2e-10 Score=127.17 Aligned_cols=127 Identities=18% Similarity=0.236 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHccCCCCCCC--------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS--------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~ 156 (688)
+.+++.+.|++|.+|.. ..+. ++-.++.+|+.++++++| ++++++ .
T Consensus 9 ~~~~~~~~l~~lv~i~S-~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g------~~~~~~----~--------------- 62 (444)
T PRK07205 9 VQDACVAAIKTLVSYPS-VLNEGENGTPFGQAIQDVLEATLDLCQGLG------FKTYLD----P--------------- 62 (444)
T ss_pred hHHHHHHHHHHHccccc-ccCCCcCCCCCchhHHHHHHHHHHHHHhCC------CEEEEc----C---------------
Confidence 56788899999998743 1221 122568889999999987 333332 1
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHH
Q 005613 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMS 215 (688)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~ 215 (688)
...|+++++ |. +++.|++++|+|+||. ++|+.|++.|+|++|++++.|.
T Consensus 63 ----~~~~~~~~~-g~-----~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~ 132 (444)
T PRK07205 63 ----KGYYGYAEI-GQ-----GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALL 132 (444)
T ss_pred ----CCeEEEEEe-cC-----CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHH
Confidence 112455554 32 2367999999999985 2899999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCCChHHHHhcC
Q 005613 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH 247 (688)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h 247 (688)
+.+.+++++|.|+|.++||.|..|++.|.++.
T Consensus 133 ~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~ 164 (444)
T PRK07205 133 DAGVQFNKRIRFIFGTDEETLWRCMNRYNEVE 164 (444)
T ss_pred HcCCCCCCcEEEEEECCcccCcccHHHHHhCC
Confidence 98888899999999999999999999998644
No 50
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.17 E-value=3.2e-10 Score=122.14 Aligned_cols=130 Identities=25% Similarity=0.318 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
|++.+.+++|.++ |-+.| ++.++.+||.++|+++| ++++.+ .. + +..|++
T Consensus 2 ~~~~~~~~~lv~i-ps~s~--~e~~~~~~l~~~l~~~G------~~v~~~--~~--------~-----------~~~~~~ 51 (347)
T PRK08652 2 ERAKELLKQLVKI-PSPSG--QEDEIALHIMEFLESLG------YDVHIE--SD--------G-----------EVINIV 51 (347)
T ss_pred hhHHHHHHHHhcC-CCCCC--chHHHHHHHHHHHHHcC------CEEEEE--ec--------C-----------ceeEEE
Confidence 6788999999997 33333 45689999999999998 344432 11 0 234666
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (688)
+ + +.+.|++.+|+|+||. ++|+.|+++|+|++|++++.|.+. .++.+|.|+|..+||
T Consensus 52 ~---~------~~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE 120 (347)
T PRK08652 52 V---N------SKAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEE 120 (347)
T ss_pred c---C------CCCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcc
Confidence 5 2 1367999999999985 489999999999999999999864 346799999999999
Q ss_pred CCCCChHHHHhcCCccCCccEEEEeec
Q 005613 235 EGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
.|..|++.++++++. ..+++.|.
T Consensus 121 ~g~~G~~~~~~~~~~----d~~i~~ep 143 (347)
T PRK08652 121 EGGRGSALFAERYRP----KMAIVLEP 143 (347)
T ss_pred cCChhHHHHHHhcCC----CEEEEecC
Confidence 998999999966431 46777774
No 51
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.17 E-value=3.7e-10 Score=122.35 Aligned_cols=129 Identities=22% Similarity=0.221 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
.+++.+.|++|.+|.. .|.+++++.+||.++++++| ++++.+ ...|.
T Consensus 9 ~~~~~~~l~~lv~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~------------------------~~~~~ 55 (346)
T PRK00466 9 KQKAKELLLDLLSIYT---PSGNETNATKFFEKISNELN------LKLEIL------------------------PDSNS 55 (346)
T ss_pred HHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHHHHcC------CeEEEe------------------------cCCCc
Confidence 3789999999999843 23445688999999999998 233332 11243
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (688)
+. .| .+.|++++|+||||. ++|+.|+++|+|++|++++.+.+.+ .++.|+|+.+|
T Consensus 56 ~~--~g-------~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dE 122 (346)
T PRK00466 56 FI--LG-------EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADE 122 (346)
T ss_pred Ee--cC-------CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCc
Confidence 32 22 135999999999985 3999999999999999999998764 35899999999
Q ss_pred CCCCCChHHHHhcCCccCCccEEEEeecCc
Q 005613 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
|.|..|++.+++++. +...++..|..+
T Consensus 123 E~g~~G~~~l~~~~~---~~d~~i~~ep~~ 149 (346)
T PRK00466 123 ESTSIGAKELVSKGF---NFKHIIVGEPSN 149 (346)
T ss_pred ccCCccHHHHHhcCC---CCCEEEEcCCCC
Confidence 999899999996542 345677777554
No 52
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.16 E-value=3.7e-10 Score=123.22 Aligned_cols=137 Identities=16% Similarity=0.171 Sum_probs=100.7
Q ss_pred HHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 005613 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (688)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (688)
++.+.+++|.++. .-|+.++++.+||.+.|+++| ++++.. .. ....|+++
T Consensus 3 ~~~~~l~~Lv~ip---s~s~~e~~~~~~l~~~l~~~G------~~~~~~--~~-------------------~~~~n~~~ 52 (375)
T PRK13009 3 DVLELAQDLIRRP---SVTPDDAGCQDLLAERLEALG------FTCERM--DF-------------------GDVKNLWA 52 (375)
T ss_pred hHHHHHHHHhCCC---CCCCchhhHHHHHHHHHHHcC------CeEEEe--cc-------------------CCCcEEEE
Confidence 4567888888852 334455688999999999988 233321 11 13469999
Q ss_pred EEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005613 168 RILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (688)
Q Consensus 168 ~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~ 226 (688)
++ |. +.+.|++++|+|+||. ++|+.|+++|++++|++++.+.+.+.+++++|+
T Consensus 53 ~~-g~-----~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~ 126 (375)
T PRK13009 53 RR-GT-----EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIA 126 (375)
T ss_pred Ee-cC-----CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEE
Confidence 87 42 3478999999999985 268999999999999999999888777889999
Q ss_pred EEEeCCCCCCC-CChHHHHhcCCc-cCCccEEEEee
Q 005613 227 FLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLE 260 (688)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~~h~~-~~~v~a~iNLD 260 (688)
|++..+||.+. .|++.+++.... ......++..|
T Consensus 127 ~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~e 162 (375)
T PRK13009 127 FLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVGE 162 (375)
T ss_pred EEEEeecccccccCHHHHHHHHHHcCcCCCEEEEcC
Confidence 99999999854 699988743211 12345555555
No 53
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.14 E-value=6.7e-10 Score=121.64 Aligned_cols=139 Identities=21% Similarity=0.278 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHccCCCCCCCH-----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHAVGSD-----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~-----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
++..+.+++|.++.. ..+.+ ++.++.+||.+.|++++ ++++.+. .. + ..+
T Consensus 5 ~~~i~~l~~lv~i~s-~s~~e~~~~~~~~~~~~~l~~~l~~~g------~~~~~~~--~~-~---------------~~~ 59 (383)
T PRK05111 5 PSFIEMYRALIATPS-ISATDPALDQSNRAVIDLLAGWFEDLG------FNVEIQP--VP-G---------------TRG 59 (383)
T ss_pred hHHHHHHHHHhCcCC-cCCCCcccccchHHHHHHHHHHHHHCC------CeEEEEe--cC-C---------------CCC
Confidence 578899999998733 33321 23579999999999998 3344321 10 0 013
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p 221 (688)
..|+++++ |+ +.+.|++.+|+|+||. ++|+.|++++++++|++++.|.+. .+
T Consensus 60 ~~nvia~~-g~-----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~ 131 (383)
T PRK05111 60 KFNLLASL-GS-----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KL 131 (383)
T ss_pred CceEEEEe-CC-----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CC
Confidence 46999998 43 1246999999999974 389999999999999999999865 35
Q ss_pred CCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEee
Q 005613 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 222 ~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
+.+|+|+|..+||.|..|++.++++... ....++.-|
T Consensus 132 ~~~i~~~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~e 168 (383)
T PRK05111 132 KKPLYILATADEETSMAGARAFAEATAI--RPDCAIIGE 168 (383)
T ss_pred CCCeEEEEEeccccCcccHHHHHhcCCC--CCCEEEEcC
Confidence 6889999999999999999999965432 124455544
No 54
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.14 E-value=4.6e-09 Score=114.27 Aligned_cols=147 Identities=16% Similarity=0.204 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcC--------CCCc
Q 005613 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI--------GGRS 268 (688)
Q Consensus 197 A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~--------gg~~ 268 (688)
+.||++||+++++++|.|.+.+.+++.+|+|+|+.+||.| .|+. +....+...+|.+|.... .|+.
T Consensus 181 ~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~gaa-----~~i~pd~a~~i~vd~~~~~p~~~~lg~Gp~ 254 (343)
T TIGR03106 181 HLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SGAS-----HALPPDVAELVSVDNGTVAPGQNSSEHGVT 254 (343)
T ss_pred ecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-ccch-----hcccHhhhccEEEEecccCCCCCcCCCCce
Confidence 4899999999999999999877778899999999999999 5631 111223344466664322 1222
Q ss_pred ceec-cC-C-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeeeCCCCCCCCcCCccCCC
Q 005613 269 ALFQ-AG-P-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLL 344 (688)
Q Consensus 269 ~lfq-tg-~-~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i 344 (688)
+... .+ + |+.+.+...+.|+. .+-....+++.. .+||-..+.. -.|+|...++.- .. +-|| .+.+
T Consensus 255 i~~~d~~~~~~~~l~~~l~~~A~~-~~Ip~Q~~~~~~----~gtDa~~~~~~~~Gi~t~~i~iP-~R-y~Hs----~e~~ 323 (343)
T TIGR03106 255 IAMADSSGPFDYHLTRKLIRLCQD-HGIPHRRDVFRY----YRSDAASAVEAGHDIRTALVTFG-LD-ASHG----YERT 323 (343)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHH-cCCCcEEEecCC----CCChHHHHHHcCCCCCEEEeecc-cc-chhh----hhhc
Confidence 2112 12 2 67777776665432 111112233321 3566665543 268999887542 22 2477 5777
Q ss_pred CHHHHHHHHHHHHHHH
Q 005613 345 KPGSLQHLGENMLDFL 360 (688)
Q Consensus 345 d~~sLq~~g~~vl~lv 360 (688)
+.+.+.++.+.+.+++
T Consensus 324 ~~~D~~~~~~Ll~~~~ 339 (343)
T TIGR03106 324 HIDALEALANLLVAYA 339 (343)
T ss_pred cHHHHHHHHHHHHHHh
Confidence 8888888777665544
No 55
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.12 E-value=7e-10 Score=123.28 Aligned_cols=127 Identities=16% Similarity=0.194 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHccCCCCCC--------CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~G--------S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~ 158 (688)
+|+.+.+-++++|... .+ ++.+++..++|.++|+++|.+ ++++|
T Consensus 3 ~~~~~~f~~~~~i~s~-s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~-----~v~~d---------------------- 54 (410)
T TIGR01882 3 EELLPRFLTYVKVNTR-SDENSDTCPSTPGQLTFGNMLVDDLKSLGLQ-----DAHYD---------------------- 54 (410)
T ss_pred hHHHHHHHhhEEEecc-cCCCCCCCCCCHhHHHHHHHHHHHHHHcCCc-----eEEEc----------------------
Confidence 6788888888887432 22 223447999999999999931 25543
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------------------------------
Q 005613 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------------------------------- 193 (688)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------------------------------- 193 (688)
.+..||+++++|.. ..+.+.|++.||+|||+.
T Consensus 55 -~~~gnv~~~~~~~~--~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i 131 (410)
T TIGR01882 55 -EKNGYVIATIPSNT--DKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLI 131 (410)
T ss_pred -CCceEEEEEecCCC--CCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEE
Confidence 03689999998752 112488999999999973
Q ss_pred -CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHh
Q 005613 194 -GEG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (688)
Q Consensus 194 -spG----A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (688)
+.| +.||++|+|+||++++.|.+.+..++.+|.|+|+.+||.| .|++.+..
T Consensus 132 ~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 132 TTDGTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred EcCCCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCC-cCcchhhh
Confidence 112 3799999999999999998853345778999999999987 59988863
No 56
>PRK06156 hypothetical protein; Provisional
Probab=99.12 E-value=1.9e-09 Score=123.44 Aligned_cols=138 Identities=14% Similarity=0.196 Sum_probs=102.3
Q ss_pred CHHHHHHHHHHHHccCC-CCCC----C-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGP-HAVG----S-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (688)
Q Consensus 85 s~erA~~~L~~L~~igp-r~~G----S-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~ 158 (688)
..+++.+.|++|.+|.. .+.+ . ++.....+||.+.+++.|. +++.
T Consensus 44 ~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~------~~~~----------------------- 94 (520)
T PRK06156 44 YGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGL------DYRN----------------------- 94 (520)
T ss_pred hHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCC------eEEe-----------------------
Confidence 45678889999998743 1111 1 1223567999999998882 2211
Q ss_pred ccccceEE-EEEcCCCCCCCCCCeEEEeecCCCcCC-------------------------CCCCCCChhHHHHHHHHHH
Q 005613 159 YSDLNHIV-LRILPKYASEAGENAILVSSHIDTVSA-------------------------GEGAGDCSSCVAVMLELAR 212 (688)
Q Consensus 159 Y~~~~NVi-~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------------spGA~Dd~sGvA~~LE~ar 212 (688)
...||+ ++++|+ ..+.|++++|+|+||. ++|+.|++.|+++++++++
T Consensus 95 --~~~~v~~~~~~g~-----~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~ 167 (520)
T PRK06156 95 --VDNRVLEIGLGGS-----GSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMK 167 (520)
T ss_pred --cCCeEEEEEecCC-----CCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHH
Confidence 012344 676653 2368999999999973 2789999999999999999
Q ss_pred HHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeec
Q 005613 213 VMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 213 ~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
.|.+.+.+++++|.|+|+.+||.|..|++.++.++. ....++|+|+
T Consensus 168 ~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~~~~~D~ 213 (520)
T PRK06156 168 AIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT---PPDYNITLDA 213 (520)
T ss_pred HHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC---CCCeEEeeCC
Confidence 999888788899999999999999999999996543 2356677774
No 57
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=99.12 E-value=1.6e-09 Score=116.48 Aligned_cols=241 Identities=20% Similarity=0.236 Sum_probs=131.5
Q ss_pred CCCHHHHHHHHHHHHc----cCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccc
Q 005613 83 GFSELEAMKHVKALTQ----LGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~----igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~ 157 (688)
..+-++..+||..+-+ |..|+..- +.-.-...+ ++++++.+ .+++|.+|....+ | .+
T Consensus 56 ~lsl~eL~~Hl~tlp~~PdaIPY~TsYY~~~WGFCl~~--~~~~~L~d---g~Y~V~IdS~l~~-G------------~L 117 (386)
T PF09940_consen 56 TLSLEELKKHLHTLPDQPDAIPYRTSYYKRRWGFCLSH--NQLDALPD---GEYEVVIDSTLED-G------------SL 117 (386)
T ss_dssp EEEHHHHGGGEE--TTSTT--B--B-SSS----EE--H--HHHHT--S---SEEEEEEEEEEES--------------EE
T ss_pred EEeHHHHHhhhccCCCCCCccceeeecccCCcccccCH--HHHhhCCC---CceEEEEeeeecC-C------------ce
Confidence 4677888888888765 32343322 211111111 23333432 3467777643321 1 23
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 005613 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (688)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl 237 (688)
.|.+ ..++|+ .++.|++++|.++.. -|+||-||++++.++++.|++. +.+.+.+|+|-. +.
T Consensus 118 ~ygE-----~~ipG~-----s~~EillsthiCHPs---mANdnLSG~~v~~~La~~L~~~--~~rytYRflf~P----eT 178 (386)
T PF09940_consen 118 TYGE-----FVIPGE-----SDEEILLSTHICHPS---MANDNLSGPAVLTFLAKWLKQL--PNRYTYRFLFVP----ET 178 (386)
T ss_dssp EEEE-----EEE--S-----SS-EEEEEEE----S----TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-----TT
T ss_pred eEEE-----EEecCC-----CCCeEEEEEeccCcc---cccccccHHHHHHHHHHHHhcC--CcCceEEEEEcc----cc
Confidence 3333 345664 567799999999875 5999999999999999999986 456999999998 57
Q ss_pred CChHHHHhcCCcc--CCccEEEEeecCcCCCCcceeccCC-CHHHHHHH-HHHccCCCCcccccccccCCCCCCCCchHH
Q 005613 238 NGAHSFVTQHPWS--TTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENF-AAVAKYPSGQIIGQDLFASGVFETATDFQV 313 (688)
Q Consensus 238 ~GS~~f~~~h~~~--~~v~a~iNLD~~G~gg~~~lfqtg~-~~~li~~~-~~aa~~P~~~~l~~e~f~~g~ips~TD~~~ 313 (688)
.||-.|..+|... +++++.++|.++|..|.-. ++.+. ....++.. ....++-... ...+ ...|.++|.++
T Consensus 179 IGsI~yLskn~~~l~~~v~~G~vLtcvGD~~~~s-yk~Sr~g~~~iDr~~~~vl~~~~~~---~~~~--~F~~~GsDERQ 252 (386)
T PF09940_consen 179 IGSITYLSKNLDELKKNVKAGLVLTCVGDDGAYS-YKRSRRGNTLIDRAAAHVLKHSGPN---FKIY--DFLPRGSDERQ 252 (386)
T ss_dssp HHHHHHHHH-GGGGGG-EEEEEE--S--SSS-EE-EE--TTSSSHHHHHHHHHHHHSSS----EEEE-----S-SSTHHH
T ss_pred HHHHHHHHHCHHHHhhheeeeEEEEEecCCCCcc-eecCCCCCcHHHHHHHHHHHhcCCC---ceEe--cccccCCCcce
Confidence 8999999988653 4599999999999877544 33233 23344333 2221111110 1112 24577999999
Q ss_pred hhhcC-CCeEEEEeee--CCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005613 314 YTEVA-GLSGLDFAYT--DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (688)
Q Consensus 314 F~~~~-GiPgld~a~~--~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~ 366 (688)
|..-+ ++|...+.-. +..+-|||..|+++.|+++.|+..-+.+..++.-|-+.
T Consensus 253 fcSPG~dLPv~~~~Rs~yg~ypEYHTS~Dnl~fi~p~~L~~s~~~~~~~i~~lE~n 308 (386)
T PF09940_consen 253 FCSPGFDLPVGSLMRSKYGEYPEYHTSLDNLDFISPEGLEGSFEVLLEAIEILENN 308 (386)
T ss_dssp HTSTTT---EEEEESS-TT--TTTTBTTSSGGG--HHHHHHHHHHHHHHHHHHHH-
T ss_pred eecCCcCCceeeeecccccCCcccccCCCccccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 98721 3666555422 33467999999999999999999888888888777654
No 58
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.11 E-value=1e-09 Score=121.44 Aligned_cols=145 Identities=20% Similarity=0.251 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
+++.+.|+++.++.... ..++.++.+|+.+.+++.+. +++.+..... ....|++
T Consensus 13 ~~~~~~l~~lv~~~s~s--~~~~~~~~~~l~~~l~~~g~------~~~~~~~~~~------------------~~~~n~~ 66 (409)
T COG0624 13 DDILELLKELVRIPSVS--AGEEAEAAELLAEWLEELGF------EVEEDEVGPG------------------PGRPNLV 66 (409)
T ss_pred HHHHHHHHHHhcCCCCC--cccchHHHHHHHHHHHHcCC------ceEEeecCCC------------------CCceEEE
Confidence 45567888888863322 35567999999999999883 3443321110 0356999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I 225 (688)
+++.+. ++++.|++++|+|+||.+ +|+.|++.++++++.+++.+.+.+..++.+|
T Consensus 67 ~~~~~~----~~~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v 142 (409)
T COG0624 67 ARLGGG----DGGPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDV 142 (409)
T ss_pred EEecCC----CCCCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEE
Confidence 999875 233899999999999973 8999999999999999999999877889999
Q ss_pred EEEEeCCCCCCCCChHHHHhcCCc--cCCccEEEEeec
Q 005613 226 IFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (688)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNLD~ 261 (688)
.+++..+||.|..|...+..++.. .....+.+..|.
T Consensus 143 ~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~ 180 (409)
T COG0624 143 RLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEP 180 (409)
T ss_pred EEEEEeccccCCcchHHHHHhcchhhccCCCEEEeCCC
Confidence 999999999999999999976643 345678888886
No 59
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.10 E-value=1.4e-09 Score=119.47 Aligned_cols=149 Identities=15% Similarity=0.202 Sum_probs=105.3
Q ss_pred CHHHHHHHHHHHHccCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (688)
..+++.+.|++|.+|..- ..+ .++.++.+||.++|+++|. +++++ ....+. . ... .....
T Consensus 4 ~~~~~~~~l~~lv~i~S~-s~~~~~~~~~a~~l~~~l~~~G~------~~~~~--~~~~~~----~----~~~--~~~~~ 64 (394)
T PRK08651 4 MMFDIVEFLKDLIKIPTV-NPPGENYEEIAEFLRDTLEELGF------STEII--EVPNEY----V----KKH--DGPRP 64 (394)
T ss_pred hHHHHHHHHHHHhcCCcc-CCCCcCHHHHHHHHHHHHHHcCC------eEEEE--ecCccc----c----ccc--cCCcc
Confidence 347889999999997432 212 3345799999999999983 34433 111110 0 000 01246
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCCCcCCC--------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005613 164 HIVLRILPKYASEAGENAILVSSHIDTVSAG--------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (688)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s--------------------pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~ 223 (688)
|++++. +. .++.|++.+|+|+||.. +|+.|++.|++++|++++.+.+.+ ++
T Consensus 65 ~~~~~~-~~-----~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~ 135 (394)
T PRK08651 65 NLIARR-GS-----GNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DG 135 (394)
T ss_pred eEEEEe-CC-----CCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CC
Confidence 888865 22 23789999999999852 788999999999999999998764 78
Q ss_pred cEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCc
Q 005613 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
+|.|+|..+||.|..|++.++++... ....++..|..|
T Consensus 136 ~v~~~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~~~~~ 173 (394)
T PRK08651 136 NIELAIVPDEETGGTGTGYLVEEGKV--TPDYVIVGEPSG 173 (394)
T ss_pred CEEEEEecCccccchhHHHHHhccCC--CCCEEEEecCCC
Confidence 99999999999998999999965533 245666666544
No 60
>PRK08554 peptidase; Reviewed
Probab=99.09 E-value=1.6e-09 Score=121.52 Aligned_cols=141 Identities=16% Similarity=0.218 Sum_probs=102.7
Q ss_pred HHHHHHHHHHccCCCCCC---CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 005613 88 EAMKHVKALTQLGPHAVG---SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 88 rA~~~L~~L~~igpr~~G---S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
++.+.|++|.++.....+ ..+..++.+|+.+.+++.|. +++.. .. .+..|
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~~ 54 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGI------ESELI--EK-------------------DGYYA 54 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCC------eEEEE--ec-------------------CCceE
Confidence 356788889887432211 12346899999999999982 33321 11 02368
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
+++++. + .++.|++.+|+|+||. ++|+.|+++|+|++|.+++.|.+. .++++
T Consensus 55 l~~~~~-~-----~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~ 126 (438)
T PRK08554 55 VYGEIG-E-----GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGK 126 (438)
T ss_pred EEEEeC-C-----CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCC
Confidence 888863 2 2357999999999985 299999999999999999999874 36788
Q ss_pred EEEEEeCCCCCCCCChHHHHhcCC-ccCCccEEEEeecCc
Q 005613 225 VIFLFNTGEEEGLNGAHSFVTQHP-WSTTIRVAVDLEAMG 263 (688)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~-~~~~v~a~iNLD~~G 263 (688)
|.|+|+.+||.|..++..++++.. ......++|+.|..+
T Consensus 127 i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~ 166 (438)
T PRK08554 127 VIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIG 166 (438)
T ss_pred EEEEEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 999999999999877777665432 224568899999754
No 61
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=99.09 E-value=1.3e-09 Score=115.33 Aligned_cols=170 Identities=18% Similarity=0.169 Sum_probs=122.4
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC----
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL---- 237 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl---- 237 (688)
..|+|+.=. ..++.++++||.|+|. -|+.||-.|++...|+++.|...+ ..+-++.+++||.|+
T Consensus 178 ~y~~Ia~~~------~en~vv~i~AH~DHW~--~G~tDN~lg~~~AV~~~~~lr~~~----~~~~lv~FtAEE~g~p~~~ 245 (486)
T COG4882 178 DYNVIAVDG------GENGVVLIGAHLDHWY--TGFTDNILGVAQAVETAGRLRGRG----LAAGLVVFTAEEHGMPGMA 245 (486)
T ss_pred EEEEEEecC------CCCCceEEeechhhhh--hcccchhhhHHHHHHHHHHHhhcC----cceeEEEEeccccCCCCCc
Confidence 467766322 2456899999999998 699999999999999999998764 456778889999875
Q ss_pred -----CChHHHHhcCCccCCccEEEEeecCcCCCCcceeccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchH
Q 005613 238 -----NGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ 312 (688)
Q Consensus 238 -----~GS~~f~~~h~~~~~v~a~iNLD~~G~gg~~~lfqtg~~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~ 312 (688)
.||+.|.++.+..+++.+.+|+|.+|.+-.. + ..-|.|.+...+.-+.... .++.| .|-.
T Consensus 246 sfyWa~GSr~~lk~~k~~~~v~~~VN~Dv~g~~~lv-~---~~~P~L~e~~~~~g~~~ve---spe~y--------~Ds~ 310 (486)
T COG4882 246 SFYWAAGSRGLLKESKAAEEVEAYVNFDVAGYRCLV-A---SGAPQLVEHALEAGAVEVE---SPEPY--------CDSI 310 (486)
T ss_pred ceeecccchHHHhhcCCchhhhheeccccccccchh-h---hcChHHHHHHHHhCCceec---CCCcc--------cchh
Confidence 4899999888888999999999999975422 2 2358888877665322111 12332 4555
Q ss_pred HhhhcCCCeEEEEeeeCC---CCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhc
Q 005613 313 VYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (688)
Q Consensus 313 ~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~ 365 (688)
.+.. .|||.+.+...++ ...|||+.||+... + ..-+++.++.++.+
T Consensus 311 ~y~~-aGiPS~Ti~SL~~~~~~e~yh~p~Dtpa~~--~----n~~t~~d~a~r~v~ 359 (486)
T COG4882 311 MYAW-AGIPSLTIHSLWCPGVQEAYHTPRDTPASW--D----NAWTAVDAAVRTVT 359 (486)
T ss_pred hhhh-cCCCeeEeeeccCCCccceecCCCCCchhH--H----HHHHHHHHHHHHHh
Confidence 5666 9999999887653 45699999998422 2 23345555666664
No 62
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.08 E-value=1.1e-09 Score=123.88 Aligned_cols=126 Identities=14% Similarity=0.153 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHccCCCCC---------CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHAV---------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~---------GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~ 157 (688)
+++.+.|++|.++..-.. ...+..++.+|+.+.++++| ++++..
T Consensus 13 ~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G------~~~~~~--------------------- 65 (466)
T TIGR01886 13 DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDG------FTTKNF--------------------- 65 (466)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCC------CeEEEe---------------------
Confidence 567788889988643211 01334578999999999998 333321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 005613 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (688)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~~ 218 (688)
.|+++++.+. .+++.|++.+|+|+||. ++|+.||+.|++++|.+++.|.+.+
T Consensus 66 -----~~~~~~~~~~----~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~ 136 (466)
T TIGR01886 66 -----DNYAGHVEYG----AGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELG 136 (466)
T ss_pred -----cCCceeEEec----CCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhC
Confidence 1222222221 23468999999999985 4899999999999999999999988
Q ss_pred CCCCCcEEEEEeCCCCCCCCChHHHHhcCC
Q 005613 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (688)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (688)
.+++++|+|++..+||.|..|++.++++++
T Consensus 137 ~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 166 (466)
T TIGR01886 137 LPPSKKIRFVVGTNEETGWVDMDYYFKHEE 166 (466)
T ss_pred CCCCCCEEEEEECccccCcccHHHHHhcCc
Confidence 888999999999999999999999997654
No 63
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=99.08 E-value=4.3e-09 Score=113.55 Aligned_cols=196 Identities=17% Similarity=0.231 Sum_probs=133.4
Q ss_pred ccceEEEEEcCCCC---CCCCCCeEEEeecCCCcCC----CCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEE
Q 005613 161 DLNHIVLRILPKYA---SEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLF 229 (688)
Q Consensus 161 ~~~NVi~~i~g~~~---~~~~~~~VLl~AH~DSv~~----spGA~Dd~sGvA~~LE~ar~L~~~----~~~p~~~I~flf 229 (688)
.+.||.+++++... .....|.|++.||||+.+. ++||+.||+|++++||++|.+++- ...++.++.|+.
T Consensus 192 ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~l 271 (555)
T KOG2526|consen 192 KILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFIL 271 (555)
T ss_pred ccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEE
Confidence 68999999983211 1235689999999999754 588999999999999999999873 245789999999
Q ss_pred eCCCCCCCCChHHHHhcCC--ccCCccEEEEeecCcCCCCcc-eeccCC--CHHHHHHH----HHHccCCCCcccccccc
Q 005613 230 NTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSA-LFQAGP--NLWAVENF----AAVAKYPSGQIIGQDLF 300 (688)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~--~~~~v~a~iNLD~~G~gg~~~-lfqtg~--~~~li~~~----~~aa~~P~~~~l~~e~f 300 (688)
++|.-.+.+|++.|.+-.. .++++..+|+||++|.+..+. |..+.| +...+..+ ...+++-.-. .....
T Consensus 272 t~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdtig~~~s~l~mHvsKpP~dnt~i~qffr~l~svAek~~~~--v~~kh 349 (555)
T KOG2526|consen 272 TAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDTIGRKTSGLFMHVSKPPSDNTVIAQFFRRLNSVAEKKNIE--VVTKH 349 (555)
T ss_pred ccCccccccchhhhhhcchHHHHhcccEEEEhhhhccccCceEEEccCCCCcchHHHHHHHHhhhhchhcceE--EEEEe
Confidence 9999999999999996332 247999999999999985444 333333 33344443 3333332210 01111
Q ss_pred cCCCCCCCC-----chHHhhhcCCCeEEEEeeeCCC--CCCCCcC-CccCCCCHHHHHHHHHHHHHHHH
Q 005613 301 ASGVFETAT-----DFQVYTEVAGLSGLDFAYTDKS--AVYHTKN-DRLDLLKPGSLQHLGENMLDFLL 361 (688)
Q Consensus 301 ~~g~ips~T-----D~~~F~~~~GiPgld~a~~~~~--~~YHT~~-Dt~d~id~~sLq~~g~~vl~lv~ 361 (688)
+ .|.-.+ .|.-|.- ..+|++.+.....+ +.-.+.. |+...+|.++|-+..+.+.+.+.
T Consensus 350 k--kInla~s~lAWEHErFsi-kR~pAfTLS~l~Sprdp~rnsi~~d~rsrldedtLi~ntRlIaEAla 415 (555)
T KOG2526|consen 350 K--KINLASSRLAWEHERFSI-KRMPAFTLSTLPSPRDPARNSILLDLRSRLDEDTLIDNTRLIAEALA 415 (555)
T ss_pred e--eEeeccchhhhhhhhhhh-hcccceeeccCCCCcchhhccccccchhhhhhhhhhhhhhHHHHHHH
Confidence 1 121112 4666654 78999998865332 2234445 99999999988876666555443
No 64
>PRK09961 exoaminopeptidase; Provisional
Probab=99.06 E-value=1.2e-08 Score=111.01 Aligned_cols=151 Identities=16% Similarity=0.141 Sum_probs=99.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcCC-----------
Q 005613 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG----------- 265 (688)
Q Consensus 197 A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~g----------- 265 (688)
+-||..||++++|++|.+.+. ++..+++|+|+..||.|+.||+..+.+. +...+|.+|..-.+
T Consensus 164 alDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~i----~pd~~I~vDv~~~~d~~~~~~~~~~ 237 (344)
T PRK09961 164 AFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHR 237 (344)
T ss_pred echhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhcc----CCCEEEEEeccCCCCCCCCCCCccc
Confidence 789999999999999999764 5689999999999999999999887432 23457777755332
Q ss_pred ----CCcceec-cCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhc-CCCeEEEEeeeCCCCCCCCc
Q 005613 266 ----GRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTK 337 (688)
Q Consensus 266 ----g~~~lfq-tg~--~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~ 337 (688)
|+.+-+. .++ |+.+.+...+.++.- +.....+.+. ..+||-..|... .|+|.+.++.- .. +-||+
T Consensus 238 ~lg~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~-~Ip~Q~~~~~----ggGTDa~~~~~~~~Giptv~ig~p-~r-y~Hs~ 310 (344)
T PRK09961 238 QIGNGPMLVLSDKSLIAPPKLTAWIETVAAEI-GIPLQADMFS----NGGTDGGAVHLTGTGVPTVVMGPA-TR-HGHCA 310 (344)
T ss_pred ccCCCceEEEccCCcCCCHHHHHHHHHHHHHc-CCCcEEEecC----CCcchHHHHHHhCCCCCEEEechh-hh-cccCh
Confidence 2222111 122 677777766654321 1111111221 236888877542 68999988653 22 35886
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHHH
Q 005613 338 NDRLDLLKPGSLQHLGENMLDFLLQT 363 (688)
Q Consensus 338 ~Dt~d~id~~sLq~~g~~vl~lv~~L 363 (688)
. |.++.+.+.++.+.+.+++..+
T Consensus 311 ~---E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 311 A---SIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred h---heEEHHHHHHHHHHHHHHHHHc
Confidence 5 5667778888777777776554
No 65
>PRK13004 peptidase; Reviewed
Probab=99.06 E-value=2.6e-09 Score=118.02 Aligned_cols=135 Identities=18% Similarity=0.225 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceE-EEEeeeccCCCccccccccccccccccccce
Q 005613 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADV-EVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v-evd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
.+++.+.+++|.++ |-+. .++.++.+||.++|+++|. ++ +++ ...|
T Consensus 14 ~~~~~~~l~~lv~i-ps~s--~~e~~~a~~l~~~l~~~G~------~~~~~~------------------------~~~n 60 (399)
T PRK13004 14 KADMTRFLRDLIRI-PSES--GDEKRVVKRIKEEMEKVGF------DKVEID------------------------PMGN 60 (399)
T ss_pred HHHHHHHHHHHhcC-CCCC--CchHHHHHHHHHHHHHcCC------cEEEEc------------------------CCCe
Confidence 36788899999986 3333 3456789999999999983 21 111 2258
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~ 223 (688)
+++++.+. .+.|++.+|+|+||. ++|+.||++|++++|.+++.|.+.+.+++.
T Consensus 61 ~~a~~~~~------~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~ 134 (399)
T PRK13004 61 VLGYIGHG------KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEY 134 (399)
T ss_pred EEEEECCC------CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCC
Confidence 89988542 267999999999985 268999999999999999999998877889
Q ss_pred cEEEEEeCCCCC-CCCChHHHHhcCCccCCccEEEEeec
Q 005613 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 261 (688)
Q Consensus 224 ~I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (688)
+|.|+|..+||. +..|++.++++... ....++..|.
T Consensus 135 ~i~~~~~~~EE~~~g~~~~~~~~~~~~--~~d~~i~~e~ 171 (399)
T PRK13004 135 TLYVTGTVQEEDCDGLCWRYIIEEDKI--KPDFVVITEP 171 (399)
T ss_pred eEEEEEEcccccCcchhHHHHHHhcCC--CCCEEEEccC
Confidence 999999999996 45788888754221 2345555554
No 66
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.06 E-value=1.6e-08 Score=110.35 Aligned_cols=149 Identities=20% Similarity=0.186 Sum_probs=99.4
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcCC-----------
Q 005613 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG----------- 265 (688)
Q Consensus 197 A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~g----------- 265 (688)
|-||..||++++|++|.+.+. +++.+++++|+.-||.|+.||+.-+.+. +...+|.+|..-++
T Consensus 176 alDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~i----~pD~aI~vDv~~~~d~~~~~~~~lg 249 (350)
T TIGR03107 176 AWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTKF----NPDIFFAVDCSPAGDIYGDQGGKLG 249 (350)
T ss_pred ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhhC----CCCEEEEEecCCcCCCCCCCccccC
Confidence 789999999999999999765 5788999999999999999999765332 22477777755332
Q ss_pred -CCcceec-cCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchH--HhhhcCCCeEEEEeeeCCCCCCCCcCC
Q 005613 266 -GRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ--VYTEVAGLSGLDFAYTDKSAVYHTKND 339 (688)
Q Consensus 266 -g~~~lfq-tg~--~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~--~F~~~~GiPgld~a~~~~~~~YHT~~D 339 (688)
|+.+.+. .++ |+.+.+...+.|+. .+-. .|... . ..+||-. .+.. .|+|.+.++-- .. +-||+.
T Consensus 250 ~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~I~-~Q~~~-~---~gGtDa~~~~~~~-~Gvpt~~i~ip-~R-y~Hs~~- 319 (350)
T TIGR03107 250 EGTLLRFFDPGHIMLPRMKDFLLTTAEE-AGIK-YQYYV-A---KGGTDAGAAHLKN-SGVPSTTIGVC-AR-YIHSHQ- 319 (350)
T ss_pred CCceEEEecCCCCCCHHHHHHHHHHHHH-cCCC-cEEec-C---CCCchHHHHHHhC-CCCcEEEEccC-cc-cccChh-
Confidence 3333122 233 77777777665532 1110 11111 1 1356665 5555 79999987532 22 358876
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 005613 340 RLDLLKPGSLQHLGENMLDFLLQT 363 (688)
Q Consensus 340 t~d~id~~sLq~~g~~vl~lv~~L 363 (688)
+.++.+.+.++.+.+.+++..+
T Consensus 320 --e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 320 --TLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred --heeeHHHHHHHHHHHHHHHHhc
Confidence 4567888888888888877664
No 67
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=99.05 E-value=2.3e-09 Score=117.01 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=98.3
Q ss_pred HHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 005613 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (688)
Q Consensus 91 ~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (688)
+.|++|.++. .-|.++.++.+||.++|+++| +++++. .. .+..|++++.
T Consensus 3 ~~l~~lv~ip---s~s~~e~~~~~~i~~~l~~~G------~~~~~~--~~-------------------~~~~~~~~~~- 51 (370)
T TIGR01246 3 ELAKELISRP---SVTPNDAGCQDIIAERLEKLG------FEIEWM--HF-------------------GDTKNLWATR- 51 (370)
T ss_pred HHHHHHhcCC---CCCcchHHHHHHHHHHHHHCC------CEEEEE--ec-------------------CCCceEEEEe-
Confidence 5677888752 234455678999999999998 334332 11 0235888875
Q ss_pred CCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005613 171 PKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (688)
Q Consensus 171 g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf 229 (688)
|. ..+.|++.+|+|+||. ++|+.|++.|+++++++++.+.+.+.+++++|+|+|
T Consensus 52 g~-----~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~ 126 (370)
T TIGR01246 52 GT-----GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLI 126 (370)
T ss_pred cC-----CCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 32 3478999999999985 278899999999999999999887777788999999
Q ss_pred eCCCCCCC-CChHHHHhcCCc-cCCccEEEEeec
Q 005613 230 NTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 261 (688)
Q Consensus 230 ~~~EE~gl-~GS~~f~~~h~~-~~~v~a~iNLD~ 261 (688)
..+||.+. .|++.+++.... ......++..|.
T Consensus 127 ~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 127 TSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred EeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 99999865 699988753211 123455665553
No 68
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.05 E-value=2.2e-09 Score=115.74 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=94.5
Q ss_pred HHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcC
Q 005613 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (688)
Q Consensus 92 ~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g 171 (688)
.+++|.++ |-+.| .++++.+||.++|++++. +++.+ ...|+++.. +
T Consensus 2 ~l~~lv~i-~s~s~--~e~~~~~~l~~~l~~~g~------~~~~~------------------------~~~~~~~~~-~ 47 (336)
T TIGR01902 2 LLKDLLEI-YSPSG--KEANAAKFLEEISKDLGL------KLIID------------------------DAGNFILGK-G 47 (336)
T ss_pred hHHHHhcC-CCCCc--chHHHHHHHHHHHHHcCC------EEEEC------------------------CCCcEEEEe-C
Confidence 46778876 34443 346899999999999983 33211 224777754 2
Q ss_pred CCCCCCCCCeEEEeecCCCcCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCC
Q 005613 172 KYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNG 239 (688)
Q Consensus 172 ~~~~~~~~~~VLl~AH~DSv~~------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~G 239 (688)
. +.+.|++++|+|+||. ++|+.|+++|+|++|++++.|.+. ..+|.|+++.+||.|..|
T Consensus 48 ~-----~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G 118 (336)
T TIGR01902 48 D-----GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKG 118 (336)
T ss_pred C-----CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCcc
Confidence 1 3478999999999973 489999999999999999999764 358999999999999999
Q ss_pred hHHHHhcCCccCCccEEEEeecCc
Q 005613 240 AHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 240 S~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
++.+++++.. .+++..|..+
T Consensus 119 ~~~~~~~~~~----~~~ii~ept~ 138 (336)
T TIGR01902 119 AREVIDKNYP----FYVIVGEPSG 138 (336)
T ss_pred HHHHHhhcCC----CEEEEecCCC
Confidence 9999966432 2677777654
No 69
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=98.99 E-value=5.8e-09 Score=114.53 Aligned_cols=135 Identities=24% Similarity=0.229 Sum_probs=97.1
Q ss_pred HHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCC
Q 005613 93 VKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPK 172 (688)
Q Consensus 93 L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~ 172 (688)
|++|.++. -+ |.++.++.+||.++|++++.. .++++. ...||++++.+.
T Consensus 2 l~~Lv~ip-S~--s~~e~~~~~~i~~~l~~~g~~-----~~~~~~-----------------------~~~nvva~~~~~ 50 (373)
T TIGR01900 2 LQQIMDIF-SP--SDHEGPIADEIEAALNNLELE-----GLEVFR-----------------------FGDNVLARTDFG 50 (373)
T ss_pred hHHHhCCC-CC--CchHHHHHHHHHHHHhhcccc-----CceEEE-----------------------ECCEEEEecCCC
Confidence 56777763 22 334557899999999987621 122221 013899987432
Q ss_pred CCCCCCCCeEEEeecCCCcCC-------------------------------CCCCCCChhHHHHHHHHHHHHHh--cCC
Q 005613 173 YASEAGENAILVSSHIDTVSA-------------------------------GEGAGDCSSCVAVMLELARVMSQ--WAH 219 (688)
Q Consensus 173 ~~~~~~~~~VLl~AH~DSv~~-------------------------------spGA~Dd~sGvA~~LE~ar~L~~--~~~ 219 (688)
+.+.|++++|+|+||. ++|+.|+++|+|++|++++.|.+ .+.
T Consensus 51 -----~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~ 125 (373)
T TIGR01900 51 -----KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET 125 (373)
T ss_pred -----CCCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc
Confidence 2467999999999962 27899999999999999999954 344
Q ss_pred CCCCcEEEEEeCCCCCCC--CChHHHHhcCCccCCccEEEEeecCc
Q 005613 220 EFKNAVIFLFNTGEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAMG 263 (688)
Q Consensus 220 ~p~~~I~flf~~~EE~gl--~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (688)
.++.+|.|+|..+||.|. .|+..++++++...+..++|..|..+
T Consensus 126 ~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept~ 171 (373)
T TIGR01900 126 ELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEPTG 171 (373)
T ss_pred CCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECCCC
Confidence 678899999999999863 59999997654333456777777443
No 70
>PRK09864 putative peptidase; Provisional
Probab=98.98 E-value=4.2e-08 Score=107.00 Aligned_cols=146 Identities=21% Similarity=0.198 Sum_probs=97.2
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcC------------
Q 005613 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI------------ 264 (688)
Q Consensus 197 A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~------------ 264 (688)
|-||..||++++|++|.+.+ ++.+++|+|+.-||.|+.||+.-+.+.+ . ..+|.+|..-+
T Consensus 173 alDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i~--P--DiaIavDvt~~~d~p~~~~~~~~ 244 (356)
T PRK09864 173 ALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHIK--P--DVVIVLDTAVAGDVPGIDNIKYP 244 (356)
T ss_pred eCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcCC--C--CEEEEEecccCCCCCCCcccccc
Confidence 78999999999999999954 6799999999999999999998774332 2 34777775422
Q ss_pred ----CCCcc-eeccCC--CHHHHHHHHHHcc---CCCCcccccccccCCCCCCCCchHHhhhc-CCCeEEEEeeeCCCCC
Q 005613 265 ----GGRSA-LFQAGP--NLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAV 333 (688)
Q Consensus 265 ----gg~~~-lfqtg~--~~~li~~~~~aa~---~P~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~ 333 (688)
+|+.+ .+..++ ++.+.+...+.|+ -|+- .+.... .+||-..+... .|+|...++-- .+ +
T Consensus 245 ~~lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q----~~~~~~----ggTDa~~i~~~~~Gvpt~~isiP-~R-Y 314 (356)
T PRK09864 245 LKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQ----FSTMKT----GATDGGRYNVMGGGRPVVALCLP-TR-Y 314 (356)
T ss_pred cccCCCCeEEEccCCccCCHHHHHHHHHHHHHcCCCce----EEEcCC----CCchHHHHHHhCCCCcEEEEeec-cC-c
Confidence 22322 122233 6787777766542 2321 122221 36776666442 68999887642 23 2
Q ss_pred CCCcCCccCCCCHHHHHHHHHHHHHHHHHH
Q 005613 334 YHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (688)
Q Consensus 334 YHT~~Dt~d~id~~sLq~~g~~vl~lv~~L 363 (688)
-||+.-. ++.+.+.++.+.+.+++..+
T Consensus 315 ~Hs~~e~---~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 315 LHANSGM---ISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred CCCcceE---eEHHHHHHHHHHHHHHHHhc
Confidence 6887654 56677777777777777654
No 71
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=98.98 E-value=5.4e-09 Score=117.68 Aligned_cols=124 Identities=19% Similarity=0.270 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHccCCCC----CC-----CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccc
Q 005613 87 LEAMKHVKALTQLGPHA----VG-----SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (688)
Q Consensus 87 erA~~~L~~L~~igpr~----~G-----S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~ 157 (688)
+...+.|++|.+|..-. .+ .++..++.+|+.+++++.|. +++.
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~------~~~~---------------------- 53 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGF------TTEN---------------------- 53 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCc------eEEE----------------------
Confidence 35677888888864311 01 12345789999999999872 2321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 005613 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (688)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~~ 218 (688)
..|+.++.+.. ...+.|++++|+|+||. ++|+.|++.|+++++++++.|.+.+
T Consensus 54 ----~~~~~~~~~~~----~~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~ 125 (447)
T TIGR01887 54 ----VDNYAGYAEYG----QGEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELG 125 (447)
T ss_pred ----ecCceEEEEeC----CCCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcC
Confidence 11222222211 12367999999999984 3899999999999999999999888
Q ss_pred CCCCCcEEEEEeCCCCCCCCChHHHHhc
Q 005613 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (688)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (688)
.+++++|.|+|+.+||.|..|++.++++
T Consensus 126 ~~~~~~i~~~~~~dEE~g~~g~~~~l~~ 153 (447)
T TIGR01887 126 LKLKKKIRFIFGTDEETGWACIDYYFEH 153 (447)
T ss_pred CCCCCcEEEEEECCcccCcHhHHHHHHh
Confidence 7889999999999999999999999854
No 72
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=98.96 E-value=8.5e-09 Score=112.49 Aligned_cols=132 Identities=15% Similarity=0.200 Sum_probs=98.1
Q ss_pred HHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 005613 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (688)
Q Consensus 91 ~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (688)
+.+++|.++ |.+.| .+.++.+||.++|+++|. +++.+ .. ...|++++++
T Consensus 3 ~~~~~L~~i-ps~s~--~E~~~a~~l~~~l~~~g~------~~~~~--~~--------------------~~~~vva~~~ 51 (363)
T TIGR01891 3 DIRRHLHEH-PELSF--EEFKTSSLIAEALESLGI------EVRRG--VG--------------------GATGVVATIG 51 (363)
T ss_pred HHHHHHhcC-CCCCC--chHHHHHHHHHHHHHcCC------ceEec--CC--------------------CCcEEEEEEe
Confidence 567888886 66655 446899999999999983 33321 00 2368999987
Q ss_pred CCCCCCCCCCeEEEeecCCCcCCC-----------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005613 171 PKYASEAGENAILVSSHIDTVSAG-----------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (688)
Q Consensus 171 g~~~~~~~~~~VLl~AH~DSv~~s-----------------pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (688)
++ .+.+.|++++|+|+||.. +|+ .+++|+++.+++.|.+.+.+++++|.|+|+.+|
T Consensus 52 ~~----~~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 124 (363)
T TIGR01891 52 GG----KPGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAE 124 (363)
T ss_pred CC----CCCCEEEEEeccCCCCcccccCCCcccCCCCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecC
Confidence 63 134789999999999842 233 367899999999998866667889999999999
Q ss_pred CCCCCChHHHHhcCCccCCccEEEEeecC
Q 005613 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
|.+ .|++.++++. +.+++..+++.|..
T Consensus 125 E~~-~G~~~~~~~~-~~~~~d~~i~~e~~ 151 (363)
T TIGR01891 125 EGG-GGATKMIEDG-VLDDVDAILGLHPD 151 (363)
T ss_pred cCc-chHHHHHHCC-CCCCcCEEEEECCC
Confidence 986 7999998553 33556778887754
No 73
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=98.91 E-value=1.9e-08 Score=111.00 Aligned_cols=134 Identities=19% Similarity=0.255 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
+++.+.+++|.++ |-+.+ .+.++.+||.++++++|.+ .++.+ ...|++
T Consensus 13 ~~~~~~~~~lv~i-~s~s~--~e~~~~~~l~~~l~~~G~~-----~~~~~------------------------~~~n~~ 60 (395)
T TIGR03320 13 GDMIRFLRDLVAI-PSESG--DEKRVAERIKEEMEKLGFD-----KVEID------------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHHcC-CCCCC--chHHHHHHHHHHHHHhCCc-----EEEEC------------------------CCCCEE
Confidence 6788889999986 33333 3468899999999999831 01111 125888
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I 225 (688)
+++ |+ +.+.|++.+|+|+||. ++|+.|+++|+|++|.+++.|.+.+.+++.+|
T Consensus 61 ~~~-g~-----~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i 134 (395)
T TIGR03320 61 GYI-GH-----GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTL 134 (395)
T ss_pred EEe-CC-----CCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceE
Confidence 887 32 2367999999999984 38999999999999999999998877778899
Q ss_pred EEEEeCCCCCCC-CChHHHHhcCCccCCccEEEEee
Q 005613 226 IFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
+|.+..+||.+. .|++.++.+... ...++|..|
T Consensus 135 ~~~~~~dEE~~~g~~~~~~~~~~~~--~~d~~iv~e 168 (395)
T TIGR03320 135 LVTGTVQEEDCDGLCWQYIIEEDGI--KPEFVVITE 168 (395)
T ss_pred EEEecccccccCchHHHHHHHhcCC--CCCEEEEcC
Confidence 999999999642 344555543221 234455555
No 74
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=98.89 E-value=2.9e-08 Score=109.67 Aligned_cols=133 Identities=20% Similarity=0.251 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceE-EEEeeeccCCCccccccccccccccccccceE
Q 005613 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADV-EVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (688)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v-evd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (688)
+++.+.+++|.++ |-+.+ .+.++.+||.+.+++++. ++ +.+ ...|+
T Consensus 13 ~~~~~~l~~Lv~i-ps~s~--~e~~~~~~l~~~l~~~g~------~~~~~~------------------------~~~~v 59 (395)
T TIGR03526 13 GDMIRFLRDLVAI-PSESG--DEGRVALRIKQEMEKLGF------DKVEID------------------------PMGNV 59 (395)
T ss_pred HHHHHHHHHHhcC-CCCCC--chHHHHHHHHHHHHHcCC------ceEEEc------------------------CCCcE
Confidence 5778888999986 33333 345788999999999872 21 111 22588
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005613 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (688)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~ 224 (688)
++++ |. ..+.|++.+|+|+||. ++|+.|++.|++++|.+++.|.+.+..++.+
T Consensus 60 ~~~~-g~-----~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~ 133 (395)
T TIGR03526 60 LGYI-GH-----GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYT 133 (395)
T ss_pred EEEe-CC-----CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCce
Confidence 8887 32 2367999999999984 3899999999999999999999887667789
Q ss_pred EEEEEeCCCCC-CCCChHHHHhcCCccCCccEEEEee
Q 005613 225 VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 225 I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
+.|++..+||. +..|++.++++... ...+++..|
T Consensus 134 v~~~~~~dEE~~~g~~~~~~~~~~~~--~~d~~i~~e 168 (395)
T TIGR03526 134 LLVTGTVQEEDCDGLCWQYIIEEDKI--KPEFVVITE 168 (395)
T ss_pred EEEEEecccccCCcHhHHHHHhccCC--CCCEEEecC
Confidence 99999999994 44567777644322 234444445
No 75
>PRK08737 acetylornithine deacetylase; Provisional
Probab=98.88 E-value=2.1e-08 Score=109.94 Aligned_cols=131 Identities=21% Similarity=0.225 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHccCCCC-CCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 005613 86 ELEAMKHVKALTQLGPHA-VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (688)
Q Consensus 86 ~erA~~~L~~L~~igpr~-~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (688)
.+++.+.|++|.+|.... .++.++.++.+|+.++++ + ++++++. . + .+..|
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g------~~~~~~~--~--~----------------~~~~n 56 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--G------FQVEVID--H--G----------------AGAVS 56 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--C------CEEEEec--C--C----------------CCceE
Confidence 457889999999985431 222233688899999996 3 2344331 1 0 13468
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCCCcCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005613 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (688)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I 225 (688)
++++. |+ +.|++++|+|+||. ++|+.|+++|+|+++.+++. ++.+|
T Consensus 57 li~~~-g~-------~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v 121 (364)
T PRK08737 57 LYAVR-GT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDA 121 (364)
T ss_pred EEEEc-CC-------CeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCE
Confidence 88852 21 46999999999984 27999999999999999874 35689
Q ss_pred EEEEeCCCCCCC-CChHHHHhcCCccCCccEEEEeecC
Q 005613 226 IFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLEAM 262 (688)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (688)
.|+|+.+||.|. .|++.++++.. +..++|..|..
T Consensus 122 ~~~~~~dEE~g~~~g~~~~~~~~~---~~~~~iv~Ept 156 (364)
T PRK08737 122 AFLFSSDEEANDPRCVAAFLARGI---PYEAVLVAEPT 156 (364)
T ss_pred EEEEEcccccCchhhHHHHHHhCC---CCCEEEEcCCC
Confidence 999999999987 69899986542 23555555543
No 76
>PLN02693 IAA-amino acid hydrolase
Probab=98.67 E-value=3.7e-07 Score=102.65 Aligned_cols=121 Identities=16% Similarity=0.238 Sum_probs=89.9
Q ss_pred HHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEE
Q 005613 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (688)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~ 168 (688)
+.+..++|-+ +|.-|-++.++.+||.++|+++|. +++.. . ...|++++
T Consensus 49 ~~~~r~~lh~---~PE~s~~E~~ta~~i~~~L~~~G~------~~~~~---~--------------------~~~~via~ 96 (437)
T PLN02693 49 MVRIRRKIHE---NPELGYEEFETSKLIRSELDLIGI------KYRYP---V--------------------AITGIIGY 96 (437)
T ss_pred HHHHHHHHHh---CCCCCCchHHHHHHHHHHHHHCCC------eeEec---C--------------------CCcEEEEE
Confidence 4444445555 444455667899999999999982 33221 0 24799999
Q ss_pred EcCCCCCCCCCCeEEEeecCCCcCCC-----------CC---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005613 169 ILPKYASEAGENAILVSSHIDTVSAG-----------EG---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (688)
Q Consensus 169 i~g~~~~~~~~~~VLl~AH~DSv~~s-----------pG---A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (688)
+.++ +.+.|++.+|+|+||.. +| +.|.++++|+++.+++.|.+.+.+++.+|.|+|..+||
T Consensus 97 ~g~~-----~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE 171 (437)
T PLN02693 97 IGTG-----EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEE 171 (437)
T ss_pred ECCC-----CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEccc
Confidence 8321 24789999999999852 12 67888899999999999988765667899999999999
Q ss_pred CCCCChHHHHhcC
Q 005613 235 EGLNGAHSFVTQH 247 (688)
Q Consensus 235 ~gl~GS~~f~~~h 247 (688)
+..|++.++++.
T Consensus 172 -~~~Ga~~~i~~g 183 (437)
T PLN02693 172 -GLSGAKKMREEG 183 (437)
T ss_pred -chhhHHHHHHCC
Confidence 557999998543
No 77
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.63 E-value=1.8e-07 Score=101.75 Aligned_cols=158 Identities=18% Similarity=0.208 Sum_probs=122.0
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhhcc-ccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE-SKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~-~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
..+.||+++....|++. |-..|++++..-.++|..-|.++-. +.||+ |.+.++. . ...| .
T Consensus 4 ~is~e~v~~lt~~LV~~-~SvtgT~GE~a~ad~l~~vL~~~pYFqehpe-----d~~~~pi-----~-------nDpy-g 64 (553)
T COG4187 4 RISSERVRALTLSLVSW-PSVTGTPGEGAFADRLLGVLGELPYFQEHPE-----DLWLQPI-----H-------NDPY-G 64 (553)
T ss_pred hhhHHHHHHHHHHHeec-cccCCCcccccHHHHHHHHHhcCchhhhChH-----hhcccCC-----C-------CCcc-c
Confidence 35689999999999985 7888999988889999999988753 22332 1111110 0 0122 4
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCC------------------------------------------CCCCCC
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA------------------------------------------GEGAGD 199 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~------------------------------------------spGA~D 199 (688)
..||.+-++|+ .+++.|++.+|+|+|.+ ++|+.|
T Consensus 65 R~nv~AlVrg~----~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~D 140 (553)
T COG4187 65 RRNVFALVRGG----TSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALD 140 (553)
T ss_pred cceeEEEEecC----CCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchh
Confidence 58999999984 46789999999999975 389999
Q ss_pred ChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCc-----cCCccEEEEeecCcC
Q 005613 200 CSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-----STTIRVAVDLEAMGI 264 (688)
Q Consensus 200 d~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~-----~~~v~a~iNLD~~G~ 264 (688)
+++|.|+-|..++.+++. ...+.+|.|+.+.+||....|.+.-+...+. .-...++||+|.++-
T Consensus 141 MKsGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~ 209 (553)
T COG4187 141 MKSGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSD 209 (553)
T ss_pred hhhhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccC
Confidence 999999999999999987 4578899999999999988888877654432 236789999998865
No 78
>PLN02280 IAA-amino acid hydrolase
Probab=98.62 E-value=7.2e-07 Score=101.39 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=92.1
Q ss_pred HHHHHHHHHHc-cCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 005613 88 EAMKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (688)
Q Consensus 88 rA~~~L~~L~~-igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (688)
...+.|++|.+ +-.+|.-+.++.++.+||.++|+++|. +++.. . ...|++
T Consensus 94 ~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~------~~~~~---~--------------------~~~~vv 144 (478)
T PLN02280 94 DTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGI------MYRYP---L--------------------AKTGIR 144 (478)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCC------eEEec---C--------------------CCCEEE
Confidence 33444555544 212333344567899999999999983 33321 0 246999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCCCcCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005613 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (688)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~sp-----------G---A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (688)
+++ |++ +++.|++.+|+|+||... | +.|...++|+++.+++.|.+.+.+++.+|+|+|..+
T Consensus 145 a~~-g~~----~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pd 219 (478)
T PLN02280 145 AWI-GTG----GPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPA 219 (478)
T ss_pred EEE-CCC----CCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccc
Confidence 998 431 237899999999998521 1 233455999999999999887667788999999999
Q ss_pred CCCCCCChHHHHhcCCccCCccEEEE
Q 005613 233 EEEGLNGAHSFVTQHPWSTTIRVAVD 258 (688)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~iN 258 (688)
||.| .|++.++++ ...+++.+++-
T Consensus 220 EE~g-~Ga~~li~~-g~~~~~d~~~~ 243 (478)
T PLN02280 220 EEAG-NGAKRMIGD-GALDDVEAIFA 243 (478)
T ss_pred cccc-chHHHHHHC-CCCcCCCEEEE
Confidence 9997 499999854 23333444443
No 79
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=98.43 E-value=1.7e-06 Score=90.58 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=128.1
Q ss_pred CCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCc-cCCccEE
Q 005613 178 GENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVA 256 (688)
Q Consensus 178 ~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~ 256 (688)
.+..||+.+|.-+.. =|+||-||+|.+.-+++.|+.. +.+.+-+|+|.. +..||-.|..+|.. .++++.-
T Consensus 177 ~~~eiLlst~lCHPS---maNdn~SG~all~~lak~l~~~--ktrysYRfvf~P----~TiGsi~wLsrnee~lkhvk~G 247 (435)
T COG4310 177 SKDEILLSTYLCHPS---MANDNLSGLALLTFLAKALKSL--KTRYSYRFVFAP----ETIGSIVWLSRNEECLKHVKHG 247 (435)
T ss_pred ccceeeeeecccChh---hccCccchHHHHHHHHHHHHhc--cceeeEEEEecc----cccchhhhHhcchhHHhhhhcc
Confidence 556799999999875 5899999999999999999876 578899999987 45799999988866 4799999
Q ss_pred EEeecCcCCCCcceeccCCCHHHHHHHHHHc-cCCCCcccccccccCCCCCCCCchHHhhhc-CCCeE--EEEeeeCCCC
Q 005613 257 VDLEAMGIGGRSALFQAGPNLWAVENFAAVA-KYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSG--LDFAYTDKSA 332 (688)
Q Consensus 257 iNLD~~G~gg~~~lfqtg~~~~li~~~~~aa-~~P~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPg--ld~a~~~~~~ 332 (688)
+.+-+.|.+|.....++--...+++..+... .|- ++- .+++ ..+|.++|-+.|..- .++|. +.-.-++..+
T Consensus 248 lVlsClGD~g~~nykrtrrgna~iDki~~~tl~~~-~s~--~~~~--dF~p~G~DERQf~sPg~NLpvg~~~Rs~yG~f~ 322 (435)
T COG4310 248 LVLSCLGDGGGPNYKRTRRGNALIDKIALHTLKHC-GSN--FKAA--DFLPYGSDERQFCSPGFNLPVGGLQRSRYGDFD 322 (435)
T ss_pred eEEEEecCCCCccceeccccchHHHHHHHHHHhcC-CcC--ceee--ecccCCCchhhccCCCcCCchhhhhHhhcCCCc
Confidence 9999999987666655433344566554322 222 211 1122 357889999999761 12232 2222345556
Q ss_pred CCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005613 333 VYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (688)
Q Consensus 333 ~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~ 366 (688)
-|||..|+.+.++++.|..--+.+++++..+-+.
T Consensus 323 ~YHtSaDnL~fi~~e~L~~s~~~~memI~~lE~N 356 (435)
T COG4310 323 GYHTSADNLDFISPEGLAGSFQMMMEMILNLEIN 356 (435)
T ss_pred cccCccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999988888888888776543
No 80
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.26 E-value=2.7e-06 Score=90.82 Aligned_cols=133 Identities=23% Similarity=0.293 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecC------cCC-----
Q 005613 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM------GIG----- 265 (688)
Q Consensus 197 A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~------G~g----- 265 (688)
+-||..||++++|++|.+.+. +.+.+++|+|+..||.|+.||+..+.+. +...+|.+|.. +..
T Consensus 132 alDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~i----~PD~ai~vD~~~a~d~~~~~~~~~~ 205 (292)
T PF05343_consen 132 ALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFRI----KPDIAIAVDVTPAGDTPGSDEKEQG 205 (292)
T ss_dssp THHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHHH-----CSEEEEEEEEEESSSTTSTTTTSC
T ss_pred eCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeeccccc----CCCEEEEEeeeccCCCCCCchhhcc
Confidence 679999999999999999875 4559999999999999999999887542 23455555543 222
Q ss_pred ---CCcce-eccCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhc-CCCeEEEEeeeCCCCCCCCcC
Q 005613 266 ---GRSAL-FQAGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKN 338 (688)
Q Consensus 266 ---g~~~l-fqtg~--~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~ 338 (688)
|+.+. ...++ ++.+.+...+.++. .+-....+.+. ...||-..+... .|+|...++.--. +.||+.
T Consensus 206 lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~----~ggTDa~~~~~~~~Gi~t~~i~iP~r--y~Hs~~ 278 (292)
T PF05343_consen 206 LGKGPVIRVGDSSMIPNPKLVDKLREIAEE-NGIPYQREVFS----GGGTDAGAIQLSGGGIPTAVISIPCR--YMHSPV 278 (292)
T ss_dssp TTS-EEEEEEETTEESHHHHHHHHHHHHHH-TT--EEEEEES----SSSSTHHHHHTSTTSSEEEEEEEEEB--STTSTT
T ss_pred CCCCcEEEEccCCCCCCHHHHHHHHHHHHH-cCCCeEEEecC----CcccHHHHHHHcCCCCCEEEEecccc--cCCCcc
Confidence 22221 11112 56777776665431 11111122332 347888888652 5999998864322 379987
Q ss_pred CccC
Q 005613 339 DRLD 342 (688)
Q Consensus 339 Dt~d 342 (688)
-+.+
T Consensus 279 e~~~ 282 (292)
T PF05343_consen 279 EVID 282 (292)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6654
No 81
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=98.12 E-value=3.2e-05 Score=84.01 Aligned_cols=142 Identities=20% Similarity=0.327 Sum_probs=100.2
Q ss_pred CHHHHHHHHHHHHccCCC---CCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 005613 85 SELEAMKHVKALTQLGPH---AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (688)
Q Consensus 85 s~erA~~~L~~L~~igpr---~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (688)
..++..+.|++..+|+.- |.....-.+..+|+.++++++|.. ++. .+. |.....+ + .+..
T Consensus 14 ~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~------~~l--~dl--g~q~~~~----g---~~v~ 76 (473)
T KOG2276|consen 14 NKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAP------LEL--VDL--GYQSLPD----G---QIVP 76 (473)
T ss_pred cHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCc------eee--eec--ccCCCCC----C---cccc
Confidence 457888899999887541 122223358999999999999931 222 111 1000000 1 1112
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCCCcCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005613 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (688)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sGvA~~LE~ar~L~~~~~~ 220 (688)
..-++--..|+ +++++.+++-.|+|..|. ++|+.||+.-|+.-.++++++.+.|..
T Consensus 77 lPpvvl~~~Gs---dp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~ 153 (473)
T KOG2276|consen 77 LPPVVLGVLGS---DPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGID 153 (473)
T ss_pred cChhhhhcccC---CCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCcc
Confidence 22222222243 578899999999999885 399999999999999999999999999
Q ss_pred CCCcEEEEEeCCCCCCCCChHHHHhc
Q 005613 221 FKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (688)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (688)
++.+|+|+|-+-||.|..|-...+++
T Consensus 154 lpvnv~f~~EgmEEsgS~~L~~l~~~ 179 (473)
T KOG2276|consen 154 LPVNVVFVFEGMEESGSEGLDELIEK 179 (473)
T ss_pred ccceEEEEEEechhccCccHHHHHHH
Confidence 99999999999999999888777654
No 82
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00048 Score=76.88 Aligned_cols=188 Identities=15% Similarity=0.187 Sum_probs=124.6
Q ss_pred ccceEEEEEcCCCCC---CCCCCeEEEeecCCCcC----CCCCCCCChhHHHHHHHHHHHHHhcC--CCCCCcEEEEEeC
Q 005613 161 DLNHIVLRILPKYAS---EAGENAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQWA--HEFKNAVIFLFNT 231 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~---~~~~~~VLl~AH~DSv~----~spGA~Dd~sGvA~~LE~ar~L~~~~--~~p~~~I~flf~~ 231 (688)
...||...+++-... +...++++..+-+|+-. .++||..--++..+.|.++|+|.+.+ ...+++|.|+|+.
T Consensus 156 ~~ynvws~l~pi~ts~tnk~~~~vvv~tarmdsrsfF~n~s~Ga~S~~~slv~~laaa~al~r~pai~nl~rnV~f~~f~ 235 (596)
T KOG2657|consen 156 HSYNVWSFLTPIPTSPTNKTISKVVVVTARMDSRSFFPNISVGAVSVLTSLVSVLAAARALKRQPAINNLNRNVFFAFFN 235 (596)
T ss_pred CCccceeccCccccccccCcCcceeeeeeecccccccccccCCccccchhHHHHHHHHHHhccCcccccccceeEEEEee
Confidence 456777766553211 12367899999999953 47899888999999999999998753 3678999999999
Q ss_pred CCCCCCCChHHHHhcC-----Ccc-CC---ccEEEEeecCcCC--CCcceeccCC-C----HHHHHHHHHHcc----CCC
Q 005613 232 GEEEGLNGAHSFVTQH-----PWS-TT---IRVAVDLEAMGIG--GRSALFQAGP-N----LWAVENFAAVAK----YPS 291 (688)
Q Consensus 232 ~EE~gl~GS~~f~~~h-----~~~-~~---v~a~iNLD~~G~g--g~~~lfqtg~-~----~~li~~~~~aa~----~P~ 291 (688)
+|-.+..||..++-+. |.+ ++ +..++.+-.+|-+ ++-.++..+- . ....+......+ |++
T Consensus 236 get~~ylgS~r~~yeme~gk~pva~~s~~~iD~~LEiGqvg~~~s~kl~~~~d~~~~~sv~nqtld~L~~~ekSlrs~~f 315 (596)
T KOG2657|consen 236 GETLDYLGSGRAAYEMENGKFPVAIRSDNEIDYILEIGQVGVAKSRKLYVHVDGERYQSVKNQTLDVLDRIEKSLRSHAF 315 (596)
T ss_pred cceeeeccchhhhhHhhcCCCCeeeccCccchheeeecccccccCceEEEEeccchhhhHHHHHHHHHHHHHhcccccCe
Confidence 9999999999887543 222 33 7778877777753 2223333221 1 122233322221 333
Q ss_pred CcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeCC---CCCCCCcCCccCCCCHHHHH
Q 005613 292 GQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKPGSLQ 350 (688)
Q Consensus 292 ~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~id~~sLq 350 (688)
.- +.++- ++..+|..+=++..+...++.++-++-.+. .-+||+.+|+.|+++...-.
T Consensus 316 ~l-l~~s~-~s~~lPPsSlqsFlR~dpn~saVvLad~~~~f~NKyYhSilDdaeNin~sy~~ 375 (596)
T KOG2657|consen 316 DL-LKPSG-SSDRLPPSSLQSFLRADPNVSAVVLADYGKEFENKYYHSILDDAENINDSYEK 375 (596)
T ss_pred ee-ecCCC-CCCCCChHHHHHHHhhCCCcceEEeccCCchhhhhhhhhhhcchhhccchhhh
Confidence 21 11111 223577777777777558999999886652 34699999999999976553
No 83
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0044 Score=69.24 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=48.2
Q ss_pred CCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEee
Q 005613 198 GDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (688)
Q Consensus 198 ~Dd~sGvA~~LE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD 260 (688)
.||++|.+.++++++.+.+.. .-+..+|.+.|+++||.|+.|++.|.-. .-.+....++|
T Consensus 143 aD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a---~f~a~~ay~iD 203 (414)
T COG2195 143 ADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVA---RFLADFAYTLD 203 (414)
T ss_pred CcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHH---hhhcceeEecC
Confidence 588899999999999998653 3466789999999999999999888632 23456667777
No 84
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=96.66 E-value=0.047 Score=62.84 Aligned_cols=184 Identities=16% Similarity=0.187 Sum_probs=114.7
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCCh
Q 005613 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (688)
++.|+.+.++... .+..+.+++.+-+++.. | .-|..|++.+|.++|.+++... ..++|+|+++++|. .|.
T Consensus 2 ~G~nvy~i~rapR--~d~tEaivl~~~~~~~~---~-~~n~~~v~l~lal~~~~~~~~~-wsKDii~l~~~~~~---~g~ 71 (504)
T PF04114_consen 2 SGTNVYGILRAPR--GDGTEAIVLVVPWRDSD---G-EYNAGGVALALALARYFRRQSY-WSKDIIFLFTDDEL---AGM 71 (504)
T ss_pred CceEEEEEEecCC--CCCceeEEEEEecCCCC---c-ccchhhHHHHHHHHHHhhhchh-hhccEEEEecCCcc---hHH
Confidence 4689999887642 45678899999988664 3 4458999999999999998754 47999999998764 678
Q ss_pred HHHHhcCCc--------------cCCccEEEEeecCcCCCCcceec-cC-----CCHHHHHHHHHHccCC---CCccc--
Q 005613 241 HSFVTQHPW--------------STTIRVAVDLEAMGIGGRSALFQ-AG-----PNLWAVENFAAVAKYP---SGQII-- 295 (688)
Q Consensus 241 ~~f~~~h~~--------------~~~v~a~iNLD~~G~gg~~~lfq-tg-----~~~~li~~~~~aa~~P---~~~~l-- 295 (688)
++|++++-. +..+++.+|+|-.+.....+-.. .| ||-.+++...+.+.+. .+...
T Consensus 72 ~awl~~Yh~~~~~~~~~~~l~~~~G~i~aAl~le~~~~~~~~v~i~~eG~NGqLPNLDL~N~~~~i~~~~gi~~~~~~~~ 151 (504)
T PF04114_consen 72 QAWLEAYHDSNTKGLSSSPLPLRAGSIQAALVLEYPSDSFSSVEIKYEGLNGQLPNLDLVNTVVRIAEKEGIPMGVSLHL 151 (504)
T ss_pred HHHHHHHhCCCCccccccCCCCCCcceeEEEEEEecCCCccEEEEEEecCCCCCCCchHHHHHHHHHHhcCCCccccccc
Confidence 899875411 13688999999887654443211 13 3555665543332211 10000
Q ss_pred ------c------------cccccCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHH
Q 005613 296 ------G------------QDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENML 357 (688)
Q Consensus 296 ------~------------~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl 357 (688)
. ..+.+.+.-....+|..|.+ .+|.++.+.-.... .+ .. ....+.|+.+-
T Consensus 152 ~~~~~~~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~~-y~I~aiTl~~~~~~------~~--~~---~~~~~~gr~~E 219 (504)
T PF04114_consen 152 QPSDWHSNSDYESRLKTLLRGMLNQALGGPTGPHGAFLR-YRIDAITLRGVKST------GP--GP---HDFTAFGRILE 219 (504)
T ss_pred cccccccccchHHHHHHHHHHHHHhccCCCCCCchhhhh-cCccEEEEecccCC------CC--CC---cCHHHHHHHHH
Confidence 0 00011112223567889998 88999988321111 11 11 12456777788
Q ss_pred HHHHHHhcC
Q 005613 358 DFLLQTASS 366 (688)
Q Consensus 358 ~lv~~La~~ 366 (688)
+.+|.+-|-
T Consensus 220 ~~~RslNNL 228 (504)
T PF04114_consen 220 GIFRSLNNL 228 (504)
T ss_pred HHHHHHHHH
Confidence 888887764
No 85
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=96.15 E-value=0.11 Score=57.99 Aligned_cols=125 Identities=17% Similarity=0.248 Sum_probs=89.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCC
Q 005613 101 PHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGEN 180 (688)
Q Consensus 101 pr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~ 180 (688)
-+|--+-++.++.+||.+.|++.+- ++ ++ .. + ..+-+++.+.++ .+.+
T Consensus 23 ~~PEL~f~E~~Ta~~i~~~L~~~g~------~~-~~---~~-------~-----------~~TGvva~~~~g----~~g~ 70 (392)
T COG1473 23 EHPELGFEEYRTAAYIAEKLEELGF------EV-VE---VG-------G-----------GKTGVVATLKGG----KPGP 70 (392)
T ss_pred hCCccchhHHHHHHHHHHHHHHcCC------ee-Ee---cc-------C-----------CceEEEEEEcCC----CCCC
Confidence 3566666777999999999999982 21 11 00 0 235688999864 2345
Q ss_pred eEEEeecCCCcCC-----------CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHh
Q 005613 181 AILVSSHIDTVSA-----------GEG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (688)
Q Consensus 181 ~VLl~AH~DSv~~-----------spG----A~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (688)
.|.+-|-||-.|. .+| -+-| .=.+++|-+++.|++...+++.+|+|+|-.+||.+. |++.+++
T Consensus 71 tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD-~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~-Ga~~mi~ 148 (392)
T COG1473 71 TIALRADMDALPIQEETGLPFASKNPGVMHACGHD-GHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG-GAKAMIE 148 (392)
T ss_pred EEEEEeecccCccccccCCCcccCCCCCcccCCch-HHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc-cHHHHHh
Confidence 9999999999985 244 1222 236888999999988756789999999999999887 9999995
Q ss_pred cCCccCC-ccEEEEee
Q 005613 246 QHPWSTT-IRVAVDLE 260 (688)
Q Consensus 246 ~h~~~~~-v~a~iNLD 260 (688)
+- ..++ +.+++-+-
T Consensus 149 ~G-~~~~~vD~v~g~H 163 (392)
T COG1473 149 DG-VFDDFVDAVFGLH 163 (392)
T ss_pred cC-CccccccEEEEec
Confidence 43 2233 66666554
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=92.74 E-value=0.7 Score=52.77 Aligned_cols=156 Identities=12% Similarity=-0.020 Sum_probs=89.6
Q ss_pred EEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHh------------c-CC
Q 005613 182 ILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT------------Q-HP 248 (688)
Q Consensus 182 VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~------------~-h~ 248 (688)
-+++.+-|-+. .++-||-.||.+++|+++... +++..+++++++-||.|..|++.-.. . .|
T Consensus 245 ~~~G~~~efI~--s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~gA~s~~l~~~l~Ri~~~~~p 318 (462)
T PRK02256 245 RDVGLDRSLIG--AYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNTGAQSRFFENFVAELLAKTEG 318 (462)
T ss_pred ceeccccceee--ccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhcCC
Confidence 44455545443 678999999999999998753 35679999999999999987766541 0 11
Q ss_pred c--------cCCccEEEEeecCcCC------------------CCcceec-------cCC--CHHHHHHHHHHc---cCC
Q 005613 249 W--------STTIRVAVDLEAMGIG------------------GRSALFQ-------AGP--NLWAVENFAAVA---KYP 290 (688)
Q Consensus 249 ~--------~~~v~a~iNLD~~G~g------------------g~~~lfq-------tg~--~~~li~~~~~aa---~~P 290 (688)
. ...-..+|.+|++=+. |+.+-.. +++ ++.+.+.+.+.+ .-|
T Consensus 319 d~~~~~~~~~~~~S~~IS~Dvaha~hPn~~~~~~~~~~~~Lg~GpvIk~~d~~~~~y~t~~~~~~~~~~i~~iA~~~~Ip 398 (462)
T PRK02256 319 NYSDLKLRRALANSKALSADVSAAFDPNYPSVHEKQNAAYLGYGVVFTKYTGSRGKYGANDANAEFVAEVRNLFNKNNVV 398 (462)
T ss_pred CcchHHHHHHHhccEEEEEeCCCCCCCCCCcccCcccCccCCCCcEEEEEcCCCCcccccCCCHHHHHHHHHHHHHcCCC
Confidence 0 0011377888865321 2222111 121 555554444432 233
Q ss_pred CCcccccc-cc-cCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHH
Q 005613 291 SGQIIGQD-LF-ASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 351 (688)
Q Consensus 291 ~~~~l~~e-~f-~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~ 351 (688)
+ |. .. +.+.-.++||-.... ..|+|.+|+.--. -.-||+..+...-|.+.+-+
T Consensus 399 ~-----Q~~~~~r~d~~~GgTig~~~s-~~Gi~tvdiGiP~--l~MHS~rE~~~~~D~~~~~~ 453 (462)
T PRK02256 399 W-----QTAELGKVDQGGGGTIAKFLA-NYGMEVIDCGVAL--LSMHSPFEIASKADIYETYK 453 (462)
T ss_pred E-----EEEEeecCCCCCcChHHHHHc-CCCCcEEEechhh--hccccHHHHhhHHHHHHHHH
Confidence 2 22 11 111112478844444 4899999985321 13699888776665544433
No 87
>PRK02813 putative aminopeptidase 2; Provisional
Probab=92.53 E-value=0.53 Score=53.28 Aligned_cols=145 Identities=14% Similarity=0.095 Sum_probs=86.3
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCC---ChHH-----------HHhcCC-----ccCCccE
Q 005613 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN---GAHS-----------FVTQHP-----WSTTIRV 255 (688)
Q Consensus 195 pGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~---GS~~-----------f~~~h~-----~~~~v~a 255 (688)
.++-||-.||.+++|+++.+.+ +.++++++++-||.|.. ||+. -..... ..-.-..
T Consensus 230 s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s~~l~~~l~ri~~~~~~~~~~~~~~i~~s~ 304 (428)
T PRK02813 230 SGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADSPFLEDVLERIVLALGGDREDFLRALARSF 304 (428)
T ss_pred EecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCchhHHHHHHHHHHhhcCchHHHHHhhCCCe
Confidence 5788999999999999987532 67999999999999998 7774 110000 1123456
Q ss_pred EEEeecCcCC------------------CCcceec--cC--CCHHHHHHHHHHc---cCCCCcccccccccCCCCCCCCc
Q 005613 256 AVDLEAMGIG------------------GRSALFQ--AG--PNLWAVENFAAVA---KYPSGQIIGQDLFASGVFETATD 310 (688)
Q Consensus 256 ~iNLD~~G~g------------------g~~~lfq--tg--~~~~li~~~~~aa---~~P~~~~l~~e~f~~g~ips~TD 310 (688)
+|.+|+.-+. |..+-+. .+ +++.....+.+.+ .-|+ |.....+-.|++||
T Consensus 305 ~IS~DvahA~hPn~~~~~~~~~~~~lg~GpvIk~~~~~~y~t~~~~~a~~~~ia~~~~Ip~-----Q~~v~~~d~~gGst 379 (428)
T PRK02813 305 LISADMAHAVHPNYPEKHDPTHRPLLNKGPVIKINANQRYATDAESAAVFKLLCEKAGVPY-----QEFVNRSDMPCGST 379 (428)
T ss_pred EEEEeccCCCCCCCCCccCcccCccCCcCCeEEECCCCCcccCHHHHHHHHHHHHHcCCCE-----EEEEecCCCCCccH
Confidence 7777765332 1111111 01 2444444443332 2332 22112233567888
Q ss_pred hHHhhh-cCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHH
Q 005613 311 FQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 351 (688)
Q Consensus 311 ~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~ 351 (688)
-.++.. ..|+|.+|+.--.- .-||+..+...-|.+.+-+
T Consensus 380 ig~i~~s~~Gi~tvdiGiP~l--~MHS~~E~~~~~D~~~~~~ 419 (428)
T PRK02813 380 IGPITAARLGIRTVDVGAPML--AMHSARELAGVKDHAYLIK 419 (428)
T ss_pred HHHHHHhCCCCcEEEeChhhc--ccccHHHHccHHHHHHHHH
Confidence 888765 47999999853221 2699988877666554433
No 88
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=91.98 E-value=1.7 Score=49.85 Aligned_cols=150 Identities=11% Similarity=0.039 Sum_probs=88.5
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCCChHHHHhcCC-c-------cCCcc-----------
Q 005613 195 EGAGDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQHP-W-------STTIR----------- 254 (688)
Q Consensus 195 pGA~Dd~sGvA~~LE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~h~-~-------~~~v~----------- 254 (688)
.++-||-.||.+++|+++...+.. ..+....++++++-||.|..|++.-..... . +.+..
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~ga~GA~s~~l~d~l~ri~~~~~~~~~~~~~~~~~~ 326 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSSSQGAGSSLLPDTIERILSSLSASNNSSDDSFAKL 326 (465)
T ss_pred EecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCcchhccccccHHHHHHHHHhhccccccchhHHHHH
Confidence 468899999999999998764310 113444555559999999988877543221 1 01111
Q ss_pred ----EEEEeecCcC------------------CCCcceec----cCCCHHHHHHHHHHc---cCCCCcccccccccCCCC
Q 005613 255 ----VAVDLEAMGI------------------GGRSALFQ----AGPNLWAVENFAAVA---KYPSGQIIGQDLFASGVF 305 (688)
Q Consensus 255 ----a~iNLD~~G~------------------gg~~~lfq----tg~~~~li~~~~~aa---~~P~~~~l~~e~f~~g~i 305 (688)
.+|..|++-+ +|..+-+. ..+++.+...+.+.+ .-|+ |.....+-.
T Consensus 327 ~~~S~~IS~DvahA~hPn~~~~~d~~~~~~lg~GpvIk~~a~~~y~td~~~~a~i~~la~~~~Ip~-----Q~~~~~~d~ 401 (465)
T PTZ00371 327 MARSFLLSVDMAHAVHPNYPEKHQANHRPKFHEGIVIKYNANQRYATNGVTASLLKAIAKKANIPI-----QEFVVKNDS 401 (465)
T ss_pred HhccEEEEEecccccCCCCccccCCcCceeCCCCcEEEEeCCCCcccCHHHHHHHHHHHHHcCCCE-----EEEEecCCC
Confidence 7888887533 12221111 112555555554443 2232 221122346
Q ss_pred CCCCchHHhhh-cCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHH
Q 005613 306 ETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 351 (688)
Q Consensus 306 ps~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~ 351 (688)
|++||-.++.. ..|+|.+|+.--. -.-||+..+...-|...+-+
T Consensus 402 ~~GsTig~i~~s~~Gi~tvDiGiP~--l~MHS~rE~~~~~D~~~~~~ 446 (465)
T PTZ00371 402 PCGSTIGPILSSNLGIRTVDIGIPQ--LAMHSIREMCGVVDIYYLVK 446 (465)
T ss_pred CCcchHHHHHHhCCCCcEEEechhh--cccccHHHHccHHHHHHHHH
Confidence 67888888765 4899999985322 13699988877776655444
No 89
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=83.04 E-value=14 Score=42.89 Aligned_cols=93 Identities=22% Similarity=0.324 Sum_probs=67.9
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCCCcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCCh
Q 005613 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (688)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (688)
.+.||.+.+++.. .+..+.+++..-+|.-. |. |-.|++.++..++.+++... -.++|+|+++++ ...|-
T Consensus 119 ~G~NvyGilRAPR--gdgtEsivl~vP~~~~~---~~--~~~~v~l~lsla~~f~r~~y-WsKDII~v~~d~---~~~g~ 187 (617)
T KOG3566|consen 119 SGENVYGILRAPR--GDGTESIVLVVPYGRSS---GS--NSASVALLLSLADYFSRWVY-WSKDIIFVFTDG---PALGL 187 (617)
T ss_pred CCceEEEEEecCC--CCCcceEEEEEecccCC---Cc--chhHHHHHHHHHHHhcCCee-ecccEEEEEeCC---ccccH
Confidence 3789999997652 45678888888888654 33 37889999999999987642 578999999998 45677
Q ss_pred HHHHhcCCc-----------------cCCccEEEEeecCcC
Q 005613 241 HSFVTQHPW-----------------STTIRVAVDLEAMGI 264 (688)
Q Consensus 241 ~~f~~~h~~-----------------~~~v~a~iNLD~~G~ 264 (688)
.+|.+++.. +....+.+++|....
T Consensus 188 ~AwLeaYhd~~s~~~~~~ep~~i~~ragal~aal~l~~se~ 228 (617)
T KOG3566|consen 188 DAWLEAYHDILSLTGISVEPDEIQARAGALAAALVLEVSEK 228 (617)
T ss_pred HHHHHHhhccccccccccccccccccccceeeEEEEEeccc
Confidence 888875421 113467888887754
No 90
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=51.83 E-value=1.5e+02 Score=27.25 Aligned_cols=49 Identities=10% Similarity=-0.019 Sum_probs=36.0
Q ss_pred HHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 005613 421 ASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYV 470 (688)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~sw~ 470 (688)
..+.+.+.....++.....+.+.....+...+.++|.+..+. +.+|+++
T Consensus 32 ~~lRkhk~~~f~pi~~l~mg~l~p~~~G~itSa~IA~vY~a~-~~~M~~~ 80 (105)
T PF10190_consen 32 FTLRKHKFGRFIPIVILLMGVLGPLTGGSITSAAIAGVYRAA-GFRMSTW 80 (105)
T ss_pred HHHhhccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHc-CCcccHH
Confidence 344444444566777777777778888888999999998864 7888875
No 91
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=43.63 E-value=51 Score=36.22 Aligned_cols=56 Identities=11% Similarity=0.199 Sum_probs=43.8
Q ss_pred CCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005613 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (688)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~ 366 (688)
...||...|.+ .|+|.+.+... +...-|++. |+++.+.+....+.+..++.+|++.
T Consensus 338 ~g~tD~~~~~~-~gip~v~~Gpg-~~~~~H~~~---E~i~~~~l~~~~~i~~~~i~~l~~~ 393 (394)
T PRK08651 338 LGGTDARFFGA-KGIPTVVYGPG-ELELAHAPD---EYVEVKDVEKAAKVYEEVLKRLAKG 393 (394)
T ss_pred cCcccHHHHhh-CCCcEEEECCC-ChHhcCCCC---ceeEHHHHHHHHHHHHHHHHHhhcC
Confidence 46799999987 89999865332 222467755 7899999999999999999998764
No 92
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=43.34 E-value=4.8e+02 Score=29.73 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=26.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhccccC
Q 005613 584 KLATLLLGLAVPVLVSAGNIIRLANVLVATLVRF 617 (688)
Q Consensus 584 ~~~~~~~~~~~p~~~~~~~~~~~~~~fip~~gR~ 617 (688)
....+.-..+.|+++...+....-.++.|.+.|.
T Consensus 186 ~~~~l~~~ll~P~~ig~ai~~~vslliFP~sss~ 219 (459)
T PF10337_consen 186 FAYTLGKTLLKPFLIGIAIALVVSLLIFPESSSH 219 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHheeecCCCchH
Confidence 4455556678999998888888888888998883
No 93
>PRK07522 acetylornithine deacetylase; Provisional
Probab=40.49 E-value=78 Score=34.58 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHH
Q 005613 276 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGEN 355 (688)
Q Consensus 276 ~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~ 355 (688)
+..+++.++++...+... ..+..||-..|.. .|+|.+.+..... ...||+. |+++.+.+.+..+.
T Consensus 311 ~~~~v~~~~~~~~~~~~~----------~~~~~td~~~~~~-~gip~v~~Gpg~~-~~~H~~~---E~i~i~~l~~~~~~ 375 (385)
T PRK07522 311 DAAAARLVRALTGDNDLR----------KVAYGTEAGLFQR-AGIPTVVCGPGSI-EQAHKPD---EFVELAQLAACEAF 375 (385)
T ss_pred CcHHHHHHHHHhCCCCcc----------eEeeecchHHhcc-CCCCEEEECCCCh-hhCCCCC---ccccHHHHHHHHHH
Confidence 455777776654332210 1234699999986 8999986543222 3578865 78999999999999
Q ss_pred HHHHHHHHh
Q 005613 356 MLDFLLQTA 364 (688)
Q Consensus 356 vl~lv~~La 364 (688)
+..++..+|
T Consensus 376 ~~~~~~~~~ 384 (385)
T PRK07522 376 LRRLLASLA 384 (385)
T ss_pred HHHHHHHHh
Confidence 999988876
No 94
>PRK08596 acetylornithine deacetylase; Validated
Probab=37.44 E-value=69 Score=35.85 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=45.6
Q ss_pred CCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005613 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (688)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~~ 367 (688)
+..||...|.+ .|+|++.+.... ....|++. |+++.+.+.+..+.+..++..+...+
T Consensus 363 ~g~tD~~~~~~-~gip~v~~Gpg~-~~~~H~~~---E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 363 TTVTDGGWFAE-FGIPAVIYGPGT-LEEAHSVN---EKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred eeecchhhhhh-cCCCEEEECCCc-ccccCCCC---ceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 45789999988 899999766432 34578855 88999999999999999999887643
No 95
>PRK07338 hypothetical protein; Provisional
Probab=30.53 E-value=83 Score=34.77 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEE-EeeeCCCCCCCCcCCccCCCCHHHHHHHHH
Q 005613 276 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLD-FAYTDKSAVYHTKNDRLDLLKPGSLQHLGE 354 (688)
Q Consensus 276 ~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld-~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~ 354 (688)
++.+.+...++.+. .+..... ...+..||-..|.. .|+|.++ +... +...|++. |+++.+.+.+..+
T Consensus 321 ~~~l~~~~~~~~~~-~g~~~~~-----~~~~g~tDa~~~~~-~giP~v~~~Gpg--~~~~H~~~---E~v~i~~l~~~~~ 388 (402)
T PRK07338 321 QQRLFEAVQACGAA-LGLTIDW-----KDSGGVCDGNNLAA-AGLPVVDTLGVR--GGNIHSED---EFVILDSLVERAQ 388 (402)
T ss_pred hHHHHHHHHHHHHH-cCCCccc-----ccCCccchHHHHhh-cCCCeEeccCCC--CCCCCCcc---ceEehhhHHHHHH
Confidence 44577776664322 2221111 12356799999987 8999996 3332 33468866 7899999999999
Q ss_pred HHHHHHHHHhcC
Q 005613 355 NMLDFLLQTASS 366 (688)
Q Consensus 355 ~vl~lv~~La~~ 366 (688)
.+..++..++..
T Consensus 389 ~~~~~l~~~~~~ 400 (402)
T PRK07338 389 LSALILMRLAQG 400 (402)
T ss_pred HHHHHHHHHhcC
Confidence 999999988654
No 96
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=29.68 E-value=70 Score=35.69 Aligned_cols=58 Identities=9% Similarity=0.042 Sum_probs=45.5
Q ss_pred CCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005613 305 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (688)
Q Consensus 305 ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~ 366 (688)
.+..||...|+. .|+|.+-+.+...+..-|++. |+++.+.+....+.+..++.++++.
T Consensus 352 ~~g~tDa~~~~~-~gip~v~~g~G~~~~~aH~~n---E~i~i~~~~~~~~~~~~~~~~~~~~ 409 (410)
T PRK06133 352 TGGGTDAAFAAG-SGKAAVLEGFGLVGFGAHSND---EYIELNSIVPRLYLLTRMIMELSRD 409 (410)
T ss_pred CCCCchHHHHHh-cCCCceEecccCCCCCCCCCC---cEEEcccHHHHHHHHHHHHHHhhcC
Confidence 456899999988 799988755444334468876 7888999999999999999988763
No 97
>PRK07079 hypothetical protein; Provisional
Probab=25.99 E-value=1.9e+02 Score=32.90 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=42.8
Q ss_pred CCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005613 307 TATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (688)
Q Consensus 307 s~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~~~ 367 (688)
..+|-..|.+..|+|.+.+.....+...|++. |+++.+.+....+.+..++..++++.
T Consensus 401 g~~d~~~~~~~~giP~v~~g~~~~~~~~H~~d---E~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 401 GSLPNDVFADILGLPTLWVPHSYPACSQHAPN---EHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred cchhHHHHHHHhCCCEEEecCCCCCccCcCCC---CCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 34577778765799999543222222358754 68899999999999999999998864
No 98
>PRK13381 peptidase T; Provisional
Probab=25.73 E-value=1e+02 Score=34.26 Aligned_cols=77 Identities=18% Similarity=0.096 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHH
Q 005613 276 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGEN 355 (688)
Q Consensus 276 ~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~ 355 (688)
++.+++...++.+. .+.. . .....+..||...|.+ .|+|.+.+.... . .-|++. |+++.+.+.+..+.
T Consensus 327 ~~~lv~~l~~a~~~-~g~~----~-~~~~~~g~tDa~~~~~-~giP~v~~GpG~-~-~aH~~d---E~v~i~~l~~~~~v 394 (404)
T PRK13381 327 DRRAVDLAFDAMKE-LGIE----P-KVIPMRGGTDGAALSA-KGLPTPNLFTGA-H-NFHSRF---EFLPVSSFVKSYEV 394 (404)
T ss_pred CHHHHHHHHHHHHH-cCCC----e-eeccCCccchHHHHhc-CCCCeEEECccc-c-CCcCcc---eeEEHHHHHHHHHH
Confidence 55666666655432 2211 1 0012457899999987 799999875332 2 257743 67889999999999
Q ss_pred HHHHHHHHh
Q 005613 356 MLDFLLQTA 364 (688)
Q Consensus 356 vl~lv~~La 364 (688)
+..++.+++
T Consensus 395 ~~~~~~~~~ 403 (404)
T PRK13381 395 TITICLLAA 403 (404)
T ss_pred HHHHHHHhc
Confidence 999998876
No 99
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=24.48 E-value=1.4e+02 Score=33.05 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=43.3
Q ss_pred CCCCchHHhhhcCCCeEEEEeeeCC-CCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhc
Q 005613 306 ETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (688)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~-~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~ 365 (688)
+..||...|++ .|+|.+.+.-... ....|++.. +++.+.+.+..+.+..++.++++
T Consensus 343 ~g~tDa~~~~~-~gip~v~fgp~~~~~~~aH~~dE---~i~i~~l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 343 PGSTDSRYIRA-AGVPALGFSPMNNTPVLLHDHNE---FLNEAVFLRGIEIYQTLISALAS 399 (400)
T ss_pred cCcchHHHHHh-CCCCeEEECCccCCcccccCCCC---ceEHHHHHHHHHHHHHHHHHhhc
Confidence 46799999988 8999986543322 224788654 79999999999999999988764
No 100
>PRK08126 hypothetical protein; Provisional
Probab=24.12 E-value=1.1e+03 Score=26.92 Aligned_cols=53 Identities=8% Similarity=0.019 Sum_probs=32.8
Q ss_pred eEEEeecCCCcCCCCCCC--CChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005613 181 AILVSSHIDTVSAGEGAG--DCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (688)
Q Consensus 181 ~VLl~AH~DSv~~spGA~--Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (688)
.|.+.+|.|..|...|.. ...-+.+=.-.+.++|.+.|.+ ...|.....++.+
T Consensus 355 ~I~V~GHTD~~p~~s~~~~~N~~LS~~RA~aV~~~L~~~Gv~-~~ri~~~G~G~~~ 409 (432)
T PRK08126 355 KVTVTGHTDNQPIRSAQFASNLVLSEKRAAQVAQMLQSAGVP-ASRLEAVGKGDAQ 409 (432)
T ss_pred eEEEEEecCCCCccCCccchHHHHHHHHHHHHHHHHHHcCCC-HHHeEEEEecCcC
Confidence 699999999998644432 2344455556667777777654 3446555555443
No 101
>COG3152 Predicted membrane protein [Function unknown]
Probab=24.04 E-value=4.8e+02 Score=24.67 Aligned_cols=22 Identities=14% Similarity=-0.026 Sum_probs=12.2
Q ss_pred cCCCCCCchHHHHHHHHhHHHHHH
Q 005613 575 TPVRLTRPLKLATLLLGLAVPVLV 598 (688)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~p~~~ 598 (688)
.++||++....+. +.+++|++.
T Consensus 73 rRLHD~g~sgw~~--Ll~lip~vg 94 (125)
T COG3152 73 RRLHDRGRSGWWA--LLALIPVVG 94 (125)
T ss_pred HHHHhcCCchHHH--HHHHHHHHH
Confidence 5567765443233 346677766
No 102
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=22.55 E-value=1.6e+02 Score=32.06 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=41.9
Q ss_pred CCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHh
Q 005613 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (688)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La 364 (688)
+..||.+.|.+ .|+|.+.+.-.. ...|++. |+++.+.+....+.+..++.+|.
T Consensus 322 ~g~tda~~~~~-~g~p~v~~Gp~~--~~~H~~~---E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 322 GGTSDARFIAD-YGAQVVEFGPVN--ATIHKVN---ECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred CCCccHHHHHH-cCCCeEEeccCc--ccCCCCC---CcEEHHHHHHHHHHHHHHHHHHh
Confidence 45699988988 899999765433 3478876 78999999999999888887763
No 103
>PF05656 DUF805: Protein of unknown function (DUF805); InterPro: IPR008523 This entry is represented by Lactobacillus phage LBR48, DUF805. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; GO: 0016021 integral to membrane
Probab=22.35 E-value=5.8e+02 Score=22.97 Aligned_cols=10 Identities=10% Similarity=-0.027 Sum_probs=5.5
Q ss_pred hhcCCCCCCc
Q 005613 573 TLTPVRLTRP 582 (688)
Q Consensus 573 ~~~~~~~~~~ 582 (688)
...++||.+.
T Consensus 66 ~vRRlhD~G~ 75 (120)
T PF05656_consen 66 TVRRLHDIGR 75 (120)
T ss_pred HhhhhhcCCC
Confidence 3456676553
No 104
>PRK08652 acetylornithine deacetylase; Provisional
Probab=20.19 E-value=1.7e+02 Score=31.22 Aligned_cols=56 Identities=13% Similarity=0.073 Sum_probs=42.8
Q ss_pred CCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHHHHHHHHHHHHHHHHhc
Q 005613 305 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (688)
Q Consensus 305 ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~vl~lv~~La~ 365 (688)
.++.||-+.|.+ .|+|.+.+...+ ....|++. |+++.+.+.+..+.+..++..+..
T Consensus 291 ~~g~tDa~~~~~-~gip~v~~Gpg~-~~~~H~~n---E~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 291 MRSWTDAINFRY-NGTKTVVWGPGE-LDLCHTKF---ERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred CCccchhHHHHH-CCCCEEEECCCc-hhhcCCCC---ceeeHHHHHHHHHHHHHHHHHHhc
Confidence 456799999987 899998765322 23568764 678899999999999998877653
Done!