BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005616
(688 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 159/300 (53%), Gaps = 23/300 (7%)
Query: 332 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG-QLEFQQEVR 389
FSL +LQ A+ NFS +G+GGFG VYKG + G VA+K L QG +L+FQ EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 390 VLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNGSLQDRLF-RKSNVSPLLWKDRARIAAE 446
++S H +L+ L G C P LVY Y+ NGS+ L R + PL W R RIA
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
A GL +LH KI+H D+K NILLD E + + DFG+ +L+ H A
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDXHVXXA 202
Query: 507 PKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-----------GEVRR 555
+G+ + PEY TG + K+D + +G+++L+L+TG+ LA V+
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 556 AVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 614
+ KL +++D L G++ +L+ + L C + ERP ++ +V+ LE +AE
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS-EVVRMLEGDGLAE 321
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 149/292 (51%), Gaps = 21/292 (7%)
Query: 328 ESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQ 386
ES L DL+ AT NF F +G G FG VYKG + G VA+K + QG EF+
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 387 EVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARI 443
E+ LS +HPHLV+L+G C E L+Y+Y+ NG+L+ L+ + W+ R I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A GL +LH+ I+H D+K NILLD KI DFGI + TE L H
Sbjct: 145 CIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTE----LDQTHL 197
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LP---VGLAGEVR 554
KG+ Y DPEY G LT KSD YSFG+++ ++L R LP V LA
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 555 RAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 605
+ + G+L I+DP LA R+ D ++C L +RP + L K
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 149/292 (51%), Gaps = 21/292 (7%)
Query: 328 ESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQ 386
ES L DL+ AT NF F +G G FG VYKG + G VA+K + QG EF+
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 387 EVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARI 443
E+ LS +HPHLV+L+G C E L+Y+Y+ NG+L+ L+ + W+ R I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A GL +LH+ I+H D+K NILLD KI DFGI + TE L H
Sbjct: 145 CIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTE----LGQTHL 197
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LP---VGLAGEVR 554
KG+ Y DPEY G LT KSD YSFG+++ ++L R LP V LA
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 555 RAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 605
+ + G+L I+DP LA R+ D ++C L +RP + L K
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 157/300 (52%), Gaps = 23/300 (7%)
Query: 332 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG-QLEFQQEVR 389
FSL +LQ A+ NF +G+GGFG VYKG + G VA+K L QG +L+FQ EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 390 VLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNGSLQDRLF-RKSNVSPLLWKDRARIAAE 446
++S H +L+ L G C P LVY Y+ NGS+ L R + PL W R RIA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
A GL +LH KI+H D+K NILLD E + + DFG+ +L+ H A
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDXHVXXA 194
Query: 507 PKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-----------GEVRR 555
+G + PEY TG + K+D + +G+++L+L+TG+ LA V+
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 556 AVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 614
+ KL +++D L G++ +L+ + L C + ERP ++ +V+ LE +AE
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS-EVVRMLEGDGLAE 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 149/299 (49%), Gaps = 33/299 (11%)
Query: 332 FSLADLQTATCNFSE------SFKVGQGGFGCVYKGEMLGRTVAIK----MLYSHNMQGQ 381
FS +L+ T NF E K+G+GGFG VYKG + TVA+K M+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD 439
+F QE++V++K QH +LV LLG + LVY Y+PNGSL DRL PL W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 440 RARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R +IA A+G+ FLH + +H D+K NILLD ++KI DFG+ R +E
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTV 190
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG--------LAG 551
R G+ Y PE R G +TPKSD YSFG+++L+++TG V L
Sbjct: 191 MXSRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 552 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ + +D D + + + QC +RPDI K+++QL
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-----KKVQQL 300
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 149/299 (49%), Gaps = 33/299 (11%)
Query: 332 FSLADLQTATCNFSE------SFKVGQGGFGCVYKGEMLGRTVAIKMLYSH----NMQGQ 381
FS +L+ T NF E K+G+GGFG VYKG + TVA+K L + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD 439
+F QE++V++K QH +LV LLG + LVY Y+PNGSL DRL PL W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 440 RARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R +IA A+G+ FLH + +H D+K NILLD ++KI DFG+ R +E
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTV 190
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG--------LAG 551
R G+ Y PE R G +TPKSD YSFG+++L+++TG V L
Sbjct: 191 MXXRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 552 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ + +D D + + + QC +RPDI K+++QL
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-----KKVQQL 300
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 149/299 (49%), Gaps = 33/299 (11%)
Query: 332 FSLADLQTATCNFSE------SFKVGQGGFGCVYKGEMLGRTVAIK----MLYSHNMQGQ 381
FS +L+ T NF E K+G+GGFG VYKG + TVA+K M+ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD 439
+F QE++V++K QH +LV LLG + LVY Y+PNGSL DRL PL W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 440 RARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R +IA A+G+ FLH + +H D+K NILLD ++KI DFG+ R +E
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXV 184
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG--------LAG 551
R G+ Y PE R G +TPKSD YSFG+++L+++TG V L
Sbjct: 185 MXXRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 552 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ + +D D + + + QC +RPDI K+++QL
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-----KKVQQL 294
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 125/227 (55%), Gaps = 21/227 (9%)
Query: 332 FSLADLQTATCNFSE------SFKVGQGGFGCVYKGEMLGRTVAIK----MLYSHNMQGQ 381
FS +L+ T NF E K G+GGFG VYKG + TVA+K M+ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD 439
+F QE++V +K QH +LV LLG + LVY Y PNGSL DRL PL W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 440 RARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R +IA A+G+ FLH + +H D+K NILLD ++KI DFG+ R +E
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXV 181
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R G+ Y PE R G +TPKSD YSFG+++L+++TG LP
Sbjct: 182 XXSRIV---GTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG-LP 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 314 ANYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKML 373
++YD I E+L D+ C+ + K+G G FG V++ E G VA+K+L
Sbjct: 11 SDYD--IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 374 YSHNMQGQL--EFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRK 429
+ + EF +EV ++ +L+HP++V +GA P S+V EYL GSL L +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 430 SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
L + R +A ++A G+ +LH+ P IVH DLK N+L+D + + K+CDFG+ R
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 490 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 549
L F S G+ + PE R KSD YSFG+I+ +L T + P G
Sbjct: 188 LKAS------XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Query: 550 AGEVRRAVSCG 560
+ + G
Sbjct: 242 LNPAQVVAAVG 252
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
Query: 314 ANYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKML 373
++YD I E+L D+ C+ + K+G G FG V++ E G VA+K+L
Sbjct: 11 SDYD--IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 374 YSHNMQGQL--EFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRK 429
+ + EF +EV ++ +L+HP++V +GA P S+V EYL GSL L +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 430 SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
L + R +A ++A G+ +LH+ P IVH +LK N+L+D + + K+CDFG+ R
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 490 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG 548
L +F S + G+ + PE R KSD YSFG+I+ +L T + P G
Sbjct: 188 LKAS------TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 29/235 (12%)
Query: 329 SAEFSLADLQTATCNFSESFK-VGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLE-- 383
+EF + L T N E K +G+GGFG V+KG ++ VAIK L + +G+ E
Sbjct: 5 GSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 384 -----FQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
FQ+EV ++S L HP++V L G +V E++P G L RL K++ P+ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWS 122
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-----ELSSKICDFGICRLVTE 493
+ R+ +IA G+ ++ + P IVH DL+ NI L S + +K+ DFG+ +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 494 DTLYLPSFHRSTAPKGSFPYADPEY--HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
S H + G+F + PE T K+D+YSF +I+ +LTG P
Sbjct: 178 -----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 29/235 (12%)
Query: 329 SAEFSLADLQTATCNFSESFK-VGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLE-- 383
+EF + L T N E K +G+GGFG V+KG ++ VAIK L + +G+ E
Sbjct: 5 GSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 384 -----FQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
FQ+EV ++S L HP++V L G +V E++P G L RL K++ P+ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWS 122
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-----ELSSKICDFGICRLVTE 493
+ R+ +IA G+ ++ + P IVH DL+ NI L S + +K+ DFG +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 494 DTLYLPSFHRSTAPKGSFPYADPEY--HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
S H + G+F + PE T K+D+YSF +I+ +LTG P
Sbjct: 178 -----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 19/230 (8%)
Query: 329 SAEFSLADLQTATCNFSESFK-VGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLE-- 383
+EF + L T N E K +G+GGFG V+KG ++ VAIK L + +G+ E
Sbjct: 5 GSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 384 -----FQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
FQ+EV ++S L HP++V L G +V E++P G L RL K++ P+ W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWS 122
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
+ R+ +IA G+ ++ + P IVH DL+ NI L S + +C V + +L
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENA----PVCAKVADFSLSQ 177
Query: 499 PSFHRSTAPKGSFPYADPEY--HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
S H + G+F + PE T K+D+YSF +I+ +LTG P
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 124/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L NM + F QE +V+ KL+H LV L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 251 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 305
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 357
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 411
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 412 HDLMCQCWRKDPEERP 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 250 EEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 356
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 410
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 411 HDLMCQCWRKEPEERP 426
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 333 EEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 387
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 439
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 493
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 494 HDLMCQCWRKEPEERP 509
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 250 EEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 356
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 410
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 411 HDLMCQCWRKEPEERP 426
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 20/207 (9%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA 409
VG+G FG V K + + VAIK + S + + F E+R LS++ HP++V L GAC
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 410 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSSKPEKIVHGD 466
LV EY GSL + L PL + A + + + G+ +LHS +P+ ++H D
Sbjct: 74 VCLVMEYAEGGSLYNVL---HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 467 LKPQNILLDSELSS-KICDFGI-CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
LKP N+LL + + KICDFG C + T T KGS + PE
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQT----------HMTNNKGSAAWMAPEVFEGSNY 180
Query: 525 TPKSDSYSFGLIILQLLTGRLPVGLAG 551
+ K D +S+G+I+ +++T R P G
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIG 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 250 EEPIYIVGEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 356
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 410
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 411 HDLMCQCWRKEPEERP 426
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA 409
VG+G FG V K + + VAIK + S + + F E+R LS++ HP++V L GAC
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 410 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSSKPEKIVHGD 466
LV EY GSL + L PL + A + + + G+ +LHS +P+ ++H D
Sbjct: 75 VCLVMEYAEGGSLYNVL---HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 467 LKPQNILLDSELSS-KICDFGI-CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
LKP N+LL + + KICDFG C + T T KGS + PE
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDIQT----------HMTNNKGSAAWMAPEVFEGSNY 181
Query: 525 TPKSDSYSFGLIILQLLTGRLP 546
+ K D +S+G+I+ +++T R P
Sbjct: 182 SEKCDVFSWGIILWEVITRRKP 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 75 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 129
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 181
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 235
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 236 HDLMCQCWRKDPEERP 251
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 77 EEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 131
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 183
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 237
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 238 HDLMCQCWRKEPEERP 253
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 73 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 127
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 179
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 233
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 234 HDLMCQCWRKDPEERP 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 139
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 191
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 186
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 129
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 181
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 192
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 121/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L +AA+IASG+ ++ VH
Sbjct: 74 EEPIXIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 128
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDN--------EXTARQGAKFPIKWTAPEAALYG 180
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 234
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 235 HDLMCQCWRKEPEERP 250
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVCEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 144
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 196
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 31 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ + K IA + A G+ +LH+ + I+H
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA---KSIIHR 144
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L + + KI DFG L TE + + S H+ GS + PE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDSN 200
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP----K 256
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
R+ L +C + ERP P ++ E+E+L
Sbjct: 257 RMKRLMAECLKKKRDERPSF-PRILAEIEEL 286
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ K++H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN--------EXTARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 31 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ + K IA + A G+ +LH+ + I+H
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA---KSIIHR 144
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L + + KI DFG L TE + + S H+ GS + PE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDSN 200
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP----K 256
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
R+ L +C + ERP P ++ E+E+L
Sbjct: 257 RMKRLMAECLKKKRDERPSF-PRILAEIEEL 286
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 186
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 135
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 187
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 136
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 188
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L ++A+IASG+ ++ VH
Sbjct: 81 EEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 187
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 241
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 242 HDLMCQCWRKEPEERP 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 186
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 192
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 142
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 194
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 143
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDN--------EXTAREGAKFPIKWTAPEAINYGT 195
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ G L D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVMEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY--PGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ G L D F K + L +AA+IASG+ ++ VH
Sbjct: 84 EEPIYIVTEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEY-------TARQGAKFPIKWTAPEAALYG 190
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 244
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 245 HDLMCQCWRKDPEERP 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H +
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRN 130
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED Y TA +G+ FP + PE G
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI-EDNEY-------TAREGAKFPIKWTAPEAINYGT 182
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 121/256 (47%), Gaps = 27/256 (10%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+GQG FG V+ G G T VAIK L M + F QE +V+ KL+H LV L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E +V EY+ GSL D F K L ++A+IASG+ ++ VH
Sbjct: 81 EEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ NIL+ L K+ DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEW--------TARQGAKFPIKWTAPEAALYG 187
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
T KSD +SFG+++ +L T GR+P G V R V L + P L
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP--YPGMVNREV----LDQVERGYRMPCPPECPESL 241
Query: 582 VDLGLQCCELYGRERP 597
DL QC ERP
Sbjct: 242 HDLMCQCWRKEPEERP 257
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 19 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ + K IA + A G+ +LH+ + I+H
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA---KSIIHR 132
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L + + KI DFG+ + + H+ GS + PE R
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P +
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP----K 244
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
R+ L +C + ERP P ++ E+E+L
Sbjct: 245 RMKRLMAECLKKKRDERPSF-PRILAEIEEL 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%), Gaps = 32/232 (13%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLY---SHNMQGQLE-FQQEVRVLSKLQHPHLVTLLGA 405
+G GGFG VY+ +G VA+K ++ +E +QE ++ + L+HP+++ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 406 CPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
C + LV E+ G L +R+ + P + A +IA G+ +LH I+
Sbjct: 75 CLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDI---LVNWAVQIARGMNYLHDEAIVPII 130
Query: 464 HGDLKPQNILL-----DSELSSKI---CDFGICRLVTEDTLYLPSFHRST--APKGSFPY 513
H DLK NIL+ + +LS+KI DFG+ R +HR+T + G++ +
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAR----------EWHRTTKMSAAGAYAW 180
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV-GLAG-EVRRAVSCGKLS 563
PE R + + SD +S+G+++ +LLTG +P G+ G V V+ KL+
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G G V+ G G T VA+K L +M F E ++ +LQH LV L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E ++ EY+ NGSL D L S + L +AA+IA G+ F+ +H D
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ LS KI DFG+ RL+ ED TA +G+ FP + PE G
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDA-------EXTAREGAKFPIKWTAPEAINYGT 186
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T GR+P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G G T VAIK L M + F +E +++ KL+H LV L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 408 E-AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
E +V EY+ GSL D L + L + +AA++A+G+ ++ +H D
Sbjct: 75 EEPIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRD 130
Query: 467 LKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTGV 523
L+ NIL+ + L KI DFG+ RL+ ++ TA +G+ FP + PE G
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDN--------EXTARQGAKFPIKWTAPEAALYGR 182
Query: 524 LTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +L+T GR+P
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 43 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 156
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG L TE + + S H+ GS + PE R
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDKN 212
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 272
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 273 ----LMAECLKKKRDERP-LFPQILASIELL 298
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 35 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 148
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG L TE + + S H+ GS + PE R
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDKN 204
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 264
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 265 ----LMAECLKKKRDERP-LFPQILASIELL 290
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VA+KM+ +M + EF QE + + KL HP LV G C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 408 EAW--SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
+ + +V EY+ NG L + L +S+ L + ++ G+ FL S + +H
Sbjct: 74 KEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHR 128
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DL +N L+D +L K+ DFG+ R V +D + S K ++ PE +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDD-----QYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 526 PKSDSYSFGLIILQLLT-GRLPVGLA--GEVRRAVSCG 560
KSD ++FG+++ ++ + G++P L EV VS G
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 15 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 128
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG L TE + + S H+ GS + PE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDKN 184
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ +C + ERP + P ++ +E L
Sbjct: 245 LMA----ECLKKKRDERP-LFPQILASIELL 270
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 152
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 150
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 208
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 152
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 144
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 202
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 147
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 205
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 149
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 207
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 151
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 209
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + M + +F +E V+ KL HP LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV+E++ +G L D L + R AAE G+C + +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 177
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + G++P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 171
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 229
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 170
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + Y S H T K + E +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALESLQ 228
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + M + +F +E V+ KL HP LV L G C
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV+E++ +G L D L + R AAE G+C + +
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 180
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
+ KSD +SFG+++ ++ + G++P E R S +++ ++ + + R
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPY----ENRSN------SEVVEDISTGFRLYKPR 230
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
Q RERP+ P+ + L QL
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 42 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 155
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 271
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 272 ----LMAECLKKKRDERP-LFPQILASIELL 297
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 43 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 156
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 272
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 273 ----LMAECLKKKRDERP-LFPQILASIELL 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 153
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE--FDSVHNKTGAKLPVKWMALESLQ 211
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 152
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 150
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 208
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 407 P--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ +V EY+P G+L D L R+ N + +A +I+S + +L + + +H
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYL---EKKNFIH 153
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 205
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 206 NTFSIKSDVWAFGVLLWEIAT 226
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + M + +F +E V+ KL HP LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV+E++ +G L D L + R AAE G+C + +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 177
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + G++P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + M + +F +E V+ KL HP LV L G C
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV+E++ +G L D L + R AAE G+C + +
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 175
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + G++P
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 153
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 211
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 152
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 20 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 133
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 249
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 250 ----LMAECLKKKRDERP-LFPQILASIELL 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 17 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 130
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 246
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
L +C + ERP + P ++ +E L
Sbjct: 247 ----LMAECLKKKRDERP-LFPQILASIELL 272
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 157
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 215
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 20 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 133
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 249
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ +C + ERP + P ++ +E L
Sbjct: 250 LMA----ECLKKKRDERP-LFPQILASIELL 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-- 404
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G
Sbjct: 15 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
P+ ++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIH 127
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 525 TP---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVA 578
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 579 RRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
R + +C + ERP + P ++ +E L
Sbjct: 244 RLMA----ECLKKKRDERP-LFPQILASIELL 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLG-A 405
++G G FG VYKG+ G VA+KML + QL+ F+ EV VL K +H +++ +G +
Sbjct: 15 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
++V ++ SL L ++ IA + A G+ +LH+ + I+H
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHR 128
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLK NI L +L+ KI DFG+ + + H+ GS + PE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSR----WSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 526 P---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
P +SD Y+FG+++ +L+TG+LP + ++ V G LS L + + P + R
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+ +C + ERP + P ++ +E L
Sbjct: 245 LMA----ECLKKKRDERP-LFPQILASIELL 270
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + +M + +F +E V+ KL HP LV L G C
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV+E++ +G L D L + R AAE G+C + +
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 197
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + G++P
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 24/274 (8%)
Query: 347 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHN-MQGQLE-FQQEVRVLSKLQHPHLVTLLG 404
S ++G G FG VYKG+ G VA+K+L + Q + F+ EV VL K +H +++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 405 -ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+ ++V ++ SL L + + IA + A G+ +LH+ + I+
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHA---KNII 154
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV 523
H D+K NI L L+ KI DFG+ + + + P GS + PE R
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSR----WSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 524 LTP---KSDSYSFGLIILQLLTGRLP---VGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 577
P +SD YS+G+++ +L+TG LP + ++ V G S L L + P +
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270
Query: 578 ARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 611
R + D C + ERP + P ++ +E L
Sbjct: 271 KRLVAD----CVKKVKEERP-LFPQILSSIELLQ 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ FL S +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKFLAS---K 211
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMALESLQ 269
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 35/271 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G L + VAIK + M + +F +E V+ KL HP LV L G C
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-----LHSSKPE 460
E LV E++ +G L D L + R AAE G+C + +
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQ----------RGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H DL +N L+ K+ DFG+ R V +D + ST K +A PE
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKFPVKWASPEVFS 178
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 579
+ KSD +SFG+++ ++ + G++P E R S +++ ++ + + R
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPY----ENRSN------SEVVEDISTGFRLYKPR 228
Query: 580 RLVDLGLQCCELYGRERPDITPSLVKELEQL 610
Q RERP+ P+ + L QL
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TAP G+ FP + PE
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAPAGAKFPIKWTAPESLAY 188
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TAP G+ FP + PE
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAPAGAKFPIKWTAPESLAY 187
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 54/325 (16%)
Query: 332 FSLADL------QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHN 377
FS AD+ + A + S ++GQG FG VY+G G VAIK + + +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 68
Query: 378 MQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFR 428
M+ ++EF E V+ + H+V LLG + ++ E + G SL+ +
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 429 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 488
++P ++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 489 RLVTEDTLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRL 545
R + E Y KG P + PE + GV T SD +SFG+++ ++ T
Sbjct: 186 RDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 546 PV-GLAGE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DIT 600
P GL+ E V R V G L D P L +L C + + RP +I
Sbjct: 240 PYQGLSNEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
Query: 601 PSLVKELE------QLHVAEERPVP 619
S+ +E+E + +EE +P
Sbjct: 292 SSIKEEMEPGFREVSFYYSEENKLP 316
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E Y KG
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY------RKGGKGLL 194
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 248
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + + RP LE +++ ++ PSF
Sbjct: 249 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-------LEIVNLLKDDLHPSF 294
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKMLY-----SHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG V G E+ G VA+K+L S ++ G++ ++E++ L +HPH++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI--RREIQNLKLFRHPHIIKL 81
Query: 403 --LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
+ + P +V EY+ G L D + + + K+ R+ +I SG+ + H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHR---H 135
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
+VH DLKP+N+LLD+ +++KI DFG+ ++++ F R + GS YA PE
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-----EFLRXSC--GSPNYAAPEV-I 187
Query: 521 TGVLT--PKSDSYSFGLIILQLLTGRLP 546
+G L P+ D +S G+I+ LL G LP
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 54/325 (16%)
Query: 332 FSLADL------QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHN 377
FS AD+ + A + S ++GQG FG VY+G G VAIK + + +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 68
Query: 378 MQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFR 428
M+ ++EF E V+ + H+V LLG + ++ E + G SL+ +
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN 128
Query: 429 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 488
++P ++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 489 RLVTEDTLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRL 545
R + E Y KG P + PE + GV T SD +SFG+++ ++ T
Sbjct: 186 RDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 546 PV-GLAGE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DIT 600
P GL+ E V R V G L D P L +L C + + RP +I
Sbjct: 240 PYQGLSNEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
Query: 601 PSLVKELE------QLHVAEERPVP 619
S+ +E+E + +EE +P
Sbjct: 292 SSIKEEMEPGFREVSFYYSEENKLP 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEML---GRTV--AIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G+G FGCVY G +L G+ + A+K L G++ +F E ++ HP++++LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 404 GACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G C + +V Y+ +G L++ R +P + KD ++A G+ +L S +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV-KDLIGFGLQVAKGMKYLAS---K 151
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + + K+ DFG+ R + + S H T K + E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXX--SVHNKTGAKLPVKWMALESLQ 209
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +L+T P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+G G FG V+ T VA+K + +M + F E V+ LQH LV L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSN---VSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
E ++ E++ GSL D F KS+ PL +A+IA G+ F+ +
Sbjct: 81 KEPIYIITEFMAKGSLLD--FLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYI 133
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHR 520
H DL+ NIL+ + L KI DFG+ R++ ED Y TA +G+ FP + PE
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVI-EDNEY-------TAREGAKFPIKWTAPEAIN 185
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG-EVRRAVSCG 560
G T KSD +SFG+++++++T GR+P G++ EV RA+ G
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E Y KG
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------RKGGKGLL 194
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 248
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + + RP LE +++ ++ PSF
Sbjct: 249 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-------LEIVNLLKDDLHPSF 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E Y KG
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------RKGGKGLL 193
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 247
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + + RP LE +++ ++ PSF
Sbjct: 248 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-------LEIVNLLKDDLHPSF 293
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 48/308 (15%)
Query: 332 FSLADL------QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHN 377
FS AD+ + A + S ++GQG FG VY+G G VAIK + + +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 378 MQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFR 428
M+ ++EF E V+ + H+V LLG + ++ E + G SL+ +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 429 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 488
++P ++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 489 RLVTEDTLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRL 545
R + E Y KG P + PE + GV T SD +SFG+++ ++ T
Sbjct: 180 RDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 546 PV-GLAGE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DIT 600
P GL+ E V R V G L D P L +L C + + RP +I
Sbjct: 234 PYQGLSNEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
Query: 601 PSLVKELE 608
S+ +E+E
Sbjct: 286 SSIKEEME 293
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V+ G T VA+K L M Q F +E ++ LQH LV L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 408 --EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E ++ EY+ GSL D L + +L +A+IA G+ ++ + +H
Sbjct: 79 REEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 134
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ N+L+ L KI DFG+ R++ ED Y TA +G+ FP + PE G
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVI-EDNEY-------TAREGAKFPIKWTAPEAINFG 186
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
T KSD +SFG+++ +++T G++P
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 48/308 (15%)
Query: 332 FSLADL------QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHN 377
FS AD+ + A + S ++GQG FG VY+G G VAIK + + +
Sbjct: 31 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 90
Query: 378 MQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFR 428
M+ ++EF E V+ + H+V LLG + ++ E + G SL+ +
Sbjct: 91 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 150
Query: 429 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 488
++P ++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 207
Query: 489 RLVTEDTLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRL 545
R + E Y KG P + PE + GV T SD +SFG+++ ++ T
Sbjct: 208 RDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 261
Query: 546 PV-GLAGE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DIT 600
P GL+ E V R V G L D P L +L C + + RP +I
Sbjct: 262 PYQGLSNEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
Query: 601 PSLVKELE 608
S+ +E+E
Sbjct: 314 SSIKEEME 321
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRV 390
SL + + + K+G G FG VY+G + TVA+K L M+ + EF +E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 391 LSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
+ +++HP+LV LLG C + ++ E++ G+L D L R+ N + +A +I+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQIS 119
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
S + +L + +H DL +N L+ K+ DFG+ RL+T DT TA
Sbjct: 120 SAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------XTAHA 168
Query: 509 GS-FP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
G+ FP + PE + KSD ++FG+++ ++ T
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+G G FG V+ T VA+K + +M + F E V+ LQH LV L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSN---VSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
E ++ E++ GSL D F KS+ PL +A+IA G+ F+ +
Sbjct: 254 KEPIYIITEFMAKGSLLD--FLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYI 306
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHR 520
H DL+ NIL+ + L KI DFG+ R++ ED Y TA +G+ FP + PE
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVI-EDNEY-------TAREGAKFPIKWTAPEAIN 358
Query: 521 TGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG-EVRRAVSCG 560
G T KSD +SFG+++++++T GR+P G++ EV RA+ G
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 401
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 20/249 (8%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLY---SHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
K+G GG VY E +L VAIK ++ + F++EV S+L H ++V+++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
E + LV EY+ +L + + + PL +I G+ H +
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
IVH D+KPQNIL+DS + KI DFGI + ++E S ++ G+ Y PE +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-----TSLTQTNHVLGTVQYFSPEQAKG 186
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRL 581
+D YS G+++ ++L G P GE +++ + + + D + + L
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPP--FNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244
Query: 582 VDLGLQCCE 590
++ L+ E
Sbjct: 245 SNVILRATE 253
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRV 390
SL + + + K+G G +G VY+G + TVA+K L M+ + EF +E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 391 LSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
+ +++HP+LV LLG C + ++ E++ G+L D L R+ N + +A +I+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQIS 119
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
S + +L + +H DL +N L+ K+ DFG+ RL+T DT F K
Sbjct: 120 SAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----FTAHAGAK 171
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ PE + KSD ++FG+++ ++ T
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E Y
Sbjct: 134 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--- 187
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 188 ---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L +L C + + RP +I S+ +E+E
Sbjct: 245 FVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLY-----SHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG V GE + G VA+K+L S ++ G++ ++E++ L +HPH++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI--KREIQNLKLFRHPHIIKL 76
Query: 403 --LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
+ + P + +V EY+ G L D + + V + + R+ +I S + + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHR---H 130
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
+VH DLKP+N+LLD+ +++KI DFG+ ++++ F R++ GS YA PE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-----EFLRTSC--GSPNYAAPEV-I 182
Query: 521 TGVLT--PKSDSYSFGLIILQLLTGRLP 546
+G L P+ D +S G+I+ LL G LP
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 42/302 (13%)
Query: 332 FSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLE 383
F + + A + S ++GQG FG VY+G G VAIK + + +M+ ++E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSP 434
F E V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 435 LLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 494
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLA 550
Y KG P + PE + GV T SD +SFG+++ ++ T P GL+
Sbjct: 183 DYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
Query: 551 GE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKE 606
E V R V G L D P L +L C + + RP +I S+ +E
Sbjct: 237 NEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 288
Query: 607 LE 608
+E
Sbjct: 289 ME 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E Y
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--- 181
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 182 ---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L +L C + + RP +I S+ +E+E
Sbjct: 239 FVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E Y
Sbjct: 134 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--- 187
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 188 ---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L +L C + + RP +I S+ +E+E
Sbjct: 245 FVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E Y
Sbjct: 131 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--- 184
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 185 ---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 241
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L +L C + + RP +I S+ +E+E
Sbjct: 242 FVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH +L +N ++ + + KI DFG+ R + E Y KG
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------RKGGKGLL 195
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 249
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + P++ P+ LE +++ ++ PSF
Sbjct: 250 GYLDQPDNCPERVTDLMRMCWQF----NPNMRPTF---LEIVNLLKDDLHPSF 295
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH +L +N ++ + + KI DFG+ R + E Y KG
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------RKGGKGLL 194
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 248
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + P++ P+ LE +++ ++ PSF
Sbjct: 249 GYLDQPDNCPERVTDLMRMCWQF----NPNMRPTF---LEIVNLLKDDLHPSF 294
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLY-----SHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG V GE + G VA+K+L S ++ G++ ++E++ L +HPH++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI--KREIQNLKLFRHPHIIKL 76
Query: 403 --LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
+ + P + +V EY+ G L D + + V + + R+ +I S + + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHR---H 130
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
+VH DLKP+N+LLD+ +++KI DFG+ ++++ F R + GS YA PE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-----EFLRDSC--GSPNYAAPEV-I 182
Query: 521 TGVLT--PKSDSYSFGLIILQLLTGRLP 546
+G L P+ D +S G+I+ LL G LP
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRV 390
SL + + + K+G G +G VY+G + TVA+K L M+ + EF +E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 391 LSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
+ +++HP+LV LLG C + ++ E++ G+L D L R+ N + +A +I+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQIS 119
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
S + +L + +H DL +N L+ K+ DFG+ RL+T DT TA
Sbjct: 120 SAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------XTAHA 168
Query: 509 GS-FP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
G+ FP + PE + KSD ++FG+++ ++ T
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y G+ G VA+K L Q +FQ+E+++L L +V
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 403 LGAC----PEAWSLVYEYLPNGSLQDRLFR---KSNVSPLLWKDRARIAAEIASGLCFLH 455
G ++ LV EYLP+G L+D L R + + S LL +++I G+ +L
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL-----YSSQICKGMEYLG 131
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
S + VH DL +NIL++SE KI DFG+ +L+ D Y +P F YA
Sbjct: 132 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWYA- 185
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE + + +SD +SFG+++ +L T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E + KG
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------TDXXRKGGKGLL 191
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 245
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + + RP LE +++ ++ PSF
Sbjct: 246 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-------LEIVNLLKDDLHPSF 291
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N + + + KI DFG+ R + E Y
Sbjct: 128 IQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY--- 181
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 182 ---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L++L C + + RP +I S+ +E+E
Sbjct: 239 FVMEGGLL--------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+G G FG V+ G T VA+K L M Q F +E ++ LQH LV L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 408 --EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
E ++ E++ GSL D L + +L +A+IA G+ ++ + +H
Sbjct: 78 KEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 133
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRTG 522
DL+ N+L+ L KI DFG+ R++ ED Y TA +G+ FP + PE G
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI-EDNEY-------TAREGAKFPIKWTAPEAINFG 185
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
T KS+ +SFG+++ +++T G++P
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 48/308 (15%)
Query: 332 FSLADL------QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHN 377
FS AD+ + A + S ++GQG FG VY+G G VAIK + + +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 378 MQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFR 428
M+ ++EF E V+ + H+V LLG + ++ E + G SL+ +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 429 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 488
++P ++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 489 RLVTEDTLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRL 545
R + E KG P + PE + GV T SD +SFG+++ ++ T
Sbjct: 180 RDIXETD------XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 546 PV-GLAGE-VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DIT 600
P GL+ E V R V G L D P L +L C + + RP +I
Sbjct: 234 PYQGLSNEQVLRFVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
Query: 601 PSLVKELE 608
S+ +E+E
Sbjct: 286 SSIKEEME 293
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDT--------XTAHAGAKFPIKWTAPESLAY 187
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y G+ G VA+K L Q +FQ+E+++L L +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 403 LGAC----PEAWSLVYEYLPNGSLQDRLFR---KSNVSPLLWKDRARIAAEIASGLCFLH 455
G ++ LV EYLP+G L+D L R + + S LL +++I G+ +L
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL-----YSSQICKGMEYLG 144
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
S + VH DL +NIL++SE KI DFG+ +L+ D Y +P F YA
Sbjct: 145 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWYA- 198
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE + + +SD +SFG+++ +L T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 191
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E + KG
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------TDXXRKGGKGLL 194
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 248
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + P++ P+ LE +++ ++ PSF
Sbjct: 249 GYLDQPDNCPERVTDLMRMCWQF----NPNMRPTF---LEIVNLLKDDLHPSF 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 349 KVGQGGFGCVYKGEMLGRT-------VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVT 401
++G+G FG V+ E + VA+K L + + +FQ+E +L+ LQH H+V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 402 LLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD--------------RARIAA 445
G C + +V+EY+ +G L ++ R ++ D IA+
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+IASG+ +L S + VH DL +N L+ + L KI DFG+ R V Y H +
Sbjct: 141 QIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH-TM 196
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
P P PE T +SD +SFG+I+ ++ T G+ P
Sbjct: 197 LPIRWMP---PESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 42/293 (14%)
Query: 349 KVGQGGFGCVY--------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
++GQG FG VY KGE R + S +++ ++EF E V+ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLF-------RKSNVSPLLWKDRARIAAEIASGL 451
LLG + +V E + +G L+ L P ++ ++AAEIA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L++ +K VH DL +N ++ + + KI DFG+ R + E KG
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD------XXRKGGKGLL 194
Query: 512 P--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK-LSSILDP 568
P + PE + GV T SD +SFG+++ ++ + LA + + +S + L ++D
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKFVMDG 248
Query: 569 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
D P R+ DL C + + RP LE +++ ++ PSF
Sbjct: 249 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-------LEIVNLLKDDLHPSF 294
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 337 LQTATCNFSESFK----VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQ---QE 387
+Q +T FS+ +K +G+G FG V K ++ G+ A+K++ ++ + + + +E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V++L +L HP+++ L + + LV E G L D + + S + D ARI
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIR 133
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFH 502
++ SG+ ++H +K IVH DLKP+N+LL+S + + +I DFG+ + + +
Sbjct: 134 QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASK 183
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCG 560
+ G+ Y PE G K D +S G+I+ LL+G P A E + + V G
Sbjct: 184 KMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 561 KLS 563
K +
Sbjct: 243 KYT 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 26/232 (11%)
Query: 337 LQTATCNFSESF-----KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLE 383
LQ+ TC E K+G G FG V +GE G+TV A+K L + + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 384 FQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
F +EV + L H +L+ L G +V E P GSL DRL + + L +R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR 125
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSF 501
A ++A G+ +L S ++ +H DL +N+LL + KI DFG+ R L D Y+
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 502 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
HR K F + PE +T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 183 HR----KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 147
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 199
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 200 NKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 188
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y G+ G VA+K L Q +FQ+E+++L L +V
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 403 LGAC----PEAWSLVYEYLPNGSLQDRLFR---KSNVSPLLWKDRARIAAEIASGLCFLH 455
G ++ LV EYLP+G L+D L R + + S LL +++I G+ +L
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL-----YSSQICKGMEYLG 132
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
S + VH DL +NIL++SE KI DFG+ +L+ D Y +P F YA
Sbjct: 133 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWYA- 186
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE + + +SD +SFG+++ +L T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 191
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT--------XTAHAGAKFPIKWTAPESLAY 191
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 191
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 191
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + + +H
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIH 136
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 188
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLY-SHNMQGQLEFQQEVR 389
+ A + S ++GQG FG VY+G G VAIK + + +M+ ++EF E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNG-------SLQDRLFRKSNVSPLLWKDR 440
V+ + H+V LLG + ++ E + G SL+ + ++P
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
++A EIA G+ +L+++K VH DL +N ++ + + KI DFG+ R + E +
Sbjct: 126 IQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE------T 176
Query: 501 FHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAGE-VRR 555
KG P + PE + GV T SD +SFG+++ ++ T P GL+ E V R
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 556 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELE 608
V G L D P L++L C + + RP +I S+ +E+E
Sbjct: 237 FVMEGGLL--------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 138
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 190
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 191 NKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + +H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
DL +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 186
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 337 LQTATCNFSESFK----VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQ---QE 387
+Q +T FS+ +K +G+G FG V K ++ G+ A+K++ ++ + + + +E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V++L +L HP+++ L + + LV E G L D + + S + D ARI
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIR 156
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFH 502
++ SG+ ++H +K IVH DLKP+N+LL+S + + +I DFG+ + + +
Sbjct: 157 QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASK 206
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCG 560
+ G+ Y PE G K D +S G+I+ LL+G P A E + + V G
Sbjct: 207 KMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 265
Query: 561 KLS 563
K +
Sbjct: 266 KYT 268
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 337 LQTATCNFSESFK----VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQ---QE 387
+Q +T FS+ +K +G+G FG V K ++ G+ A+K++ ++ + + + +E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V++L +L HP+++ L + + LV E G L D + + S + D ARI
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIR 157
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFH 502
++ SG+ ++H +K IVH DLKP+N+LL+S + + +I DFG+ + + +
Sbjct: 158 QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASK 207
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCG 560
+ G+ Y PE G K D +S G+I+ LL+G P A E + + V G
Sbjct: 208 KMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 266
Query: 561 KLS 563
K +
Sbjct: 267 KYT 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 350 VGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG VYKG E + VAIK+L + + +EF E +++ + HPHLV L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 403 LGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
LG C LV + +P+G L + + K N+ L + +IA G+ +L
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW---CVQIAKGMMYLEE---R 136
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEY 518
++VH DL +N+L+ S KI DFG+ RL+ D A G P + E
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE------KEYNADGGKMPIKWMALEC 190
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
T +SD +S+G+ I +L+T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 132
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D + +P F YA PE
Sbjct: 133 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP--IFWYA-PE 187
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 26/231 (11%)
Query: 338 QTATCNFSESF-----KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLEF 384
Q+ TC E K+G G FG V +GE G+TV A+K L + + +F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 385 QQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+EV + L H +L+ L G +V E P GSL DRL + + L +R
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY 120
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFH 502
A ++A G+ +L S ++ +H DL +N+LL + KI DFG+ R L D Y+ H
Sbjct: 121 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
R K F + PE +T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 178 R----KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 350 VGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG VYKG E + VAIK+L + + +EF E +++ + HPHLV L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 403 LGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
LG C LV + +P+G L + + K N+ L + +IA G+ +L
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW---CVQIAKGMMYLEE---R 159
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEY 518
++VH DL +N+L+ S KI DFG+ RL+ D A G P + E
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE------KEYNADGGKMPIKWMALEC 213
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
T +SD +S+G+ I +L+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 337 LQTATCNFSESFK----VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQ---QE 387
+Q +T FS+ +K +G+G FG V K ++ G+ A+K++ ++ + + + +E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V++L +L HP+++ L + + LV E G L D + + S + D ARI
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIR 139
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFH 502
++ SG+ ++H +K IVH DLKP+N+LL+S + + +I DFG+ + + +
Sbjct: 140 QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASK 189
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCG 560
+ G+ Y PE G K D +S G+I+ LL+G P A E + + V G
Sbjct: 190 KMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 248
Query: 561 KLS 563
K +
Sbjct: 249 KYT 251
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 30/243 (12%)
Query: 337 LQTATCNFSESFK----VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQ---QE 387
+Q +T FS+ +K +G+G FG V K ++ G+ A+K++ ++ + + + +E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V++L +L HP++ L + + LV E G L D + + S + D ARI
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV---DAARIIR 133
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFH 502
++ SG+ + H +K IVH DLKP+N+LL+S + + +I DFG+ + + +
Sbjct: 134 QVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASK 183
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCG 560
+ G+ Y PE G K D +S G+I+ LL+G P A E + + V G
Sbjct: 184 KXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 561 KLS 563
K +
Sbjct: 243 KYT 245
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 26/231 (11%)
Query: 338 QTATCNFSESF-----KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLEF 384
Q+ TC E K+G G FG V +GE G+TV A+K L + + +F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 385 QQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+EV + L H +L+ L G +V E P GSL DRL + + L +R
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRY 120
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFH 502
A ++A G+ +L S ++ +H DL +N+LL + KI DFG+ R L D Y+ H
Sbjct: 121 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
R K F + PE +T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 178 R----KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + + +H
Sbjct: 286 TREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIH 341
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
+L +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 393
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT 414
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 133
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H +L +NIL+++E KI DFG+ +++ +D Y +P F YA PE
Sbjct: 134 --KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP--IFWYA-PE 188
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + + +H
Sbjct: 283 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIH 338
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
+L +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 390
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 391 NKFSIKSDVWAFGVLLWEIAT 411
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 349 KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLV 400
K+G G FG V +GE G+TV A+K L + + +F +EV + L H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 401 TLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L G +V E P GSL DRL + + L +R A ++A G+ +L S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES--- 129
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++ +H DL +N+LL + KI DFG+ R L D Y+ HR K F + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR----KVPFAWCAPES 185
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
+T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 27/224 (12%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKM-----LYSHNMQGQLEFQ 385
SLAD N+ +G+G FG V G+ VA+K+ L +MQG++E
Sbjct: 6 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE-- 62
Query: 386 QEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+E+ L L+HPH++ L + +V EY N L D + ++ +S ++ R
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRF 118
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+I S + + H KIVH DLKP+N+LLD L+ KI DFG+ ++T+ +F +
Sbjct: 119 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFLK 170
Query: 504 STAPKGSFPYADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLP 546
++ GS YA PE + P+ D +S G+I+ +L RLP
Sbjct: 171 TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 27/224 (12%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKM-----LYSHNMQGQLEFQ 385
SLAD N+ +G+G FG V G+ VA+K+ L +MQG++E
Sbjct: 5 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE-- 61
Query: 386 QEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+E+ L L+HPH++ L + +V EY N L D + ++ +S ++ R
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRF 117
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+I S + + H KIVH DLKP+N+LLD L+ KI DFG+ ++T+ +F +
Sbjct: 118 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFLK 169
Query: 504 STAPKGSFPYADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLP 546
++ GS YA PE + P+ D +S G+I+ +L RLP
Sbjct: 170 TSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G G +G VY+G + TVA+K L M+ + EF +E V+ +++HP+LV LLG C
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 407 PE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ ++ E++ G+L D L R+ N + +A +I+S + +L + + +H
Sbjct: 325 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIH 380
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYHRT 521
+L +N L+ K+ DFG+ RL+T DT TA G+ FP + PE
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY--------TAHAGAKFPIKWTAPESLAY 432
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ KSD ++FG+++ ++ T
Sbjct: 433 NKFSIKSDVWAFGVLLWEIAT 453
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
G C A L+ EYLP GSL+D L +++ + + ++I G+ +L +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGT-- 135
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PES 191
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 328 ESAEFSLADLQ-TATCNFSESFKV-GQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLE 383
E E SLA + T N E K+ G+G FG V K + GR A+K+L + + E
Sbjct: 135 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE 194
Query: 384 FQQ---EVRVLSKLQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
E RVL +HP L L + + V EY G L L R+ S +
Sbjct: 195 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----E 250
Query: 439 DRARI-AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 497
DRAR AEI S L +LHS K +V+ DLK +N++LD + KI DFG+C+ +D
Sbjct: 251 DRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 308
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ +F G+ Y PE D + G+++ +++ GRLP
Sbjct: 309 MKTFC------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 328 ESAEFSLADLQ-TATCNFSESFKV-GQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLE 383
E E SLA + T N E K+ G+G FG V K + GR A+K+L + + E
Sbjct: 132 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE 191
Query: 384 FQQ---EVRVLSKLQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
E RVL +HP L L + + V EY G L L R+ S +
Sbjct: 192 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----E 247
Query: 439 DRARI-AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 497
DRAR AEI S L +LHS K +V+ DLK +N++LD + KI DFG+C+ +D
Sbjct: 248 DRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ +F G+ Y PE D + G+++ +++ GRLP
Sbjct: 306 MKTFC------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 349 KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLV 400
K+G G FG V +GE G+TV A+K L + + +F +EV + L H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 401 TLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L G +V E P GSL DRL + + L +R A ++A G+ +L S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES--- 129
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++ +H DL +N+LL + KI DFG+ R L D Y+ HR K F + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR----KVPFAWCAPES 185
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
+T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y G+ G VA+K L Q +FQ+E+++L L +V
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 403 LGAC-----PEAWSLVYEYLPNGSLQDRLFR---KSNVSPLLWKDRARIAAEIASGLCFL 454
G PE LV EYLP+G L+D L R + + S LL +++I G+ +L
Sbjct: 74 RGVSYGPGRPEL-RLVMEYLPSGCLRDFLQRHRARLDASRLLL-----YSSQICKGMEYL 127
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
S + VH DL +NIL++SE KI DFG+ +L+ D R F YA
Sbjct: 128 GS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX--XVVREPGQSPIFWYA 182
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE + + +SD +SFG+++ +L T
Sbjct: 183 -PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 136 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 190
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 137
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 138 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 192
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 138
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 139 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 193
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 139
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 140 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 194
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 26/232 (11%)
Query: 337 LQTATCNFSESF-----KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLE 383
LQ+ TC E K+G G FG V +GE G+TV A+K L + + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 384 FQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
F +EV + L H +L+ L G +V E P GSL DRL + + L +R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR 125
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSF 501
A ++A G+ +L S ++ +H DL +N+LL + KI DFG+ R L D +
Sbjct: 126 YAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 502 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
HR K F + PE +T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 183 HR----KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 136
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 137 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 191
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 132
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 133 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 187
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 131
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 132 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 186
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 26/214 (12%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKM-----LYSHNMQGQLEFQQEVRVLSKLQ 395
N+ +G+G FG V G+ VA+K+ L +MQG++E +E+ L L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 396 HPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
HPH++ L + +V EY N L D + ++ +S ++ R +I S + +
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEY 118
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
H KIVH DLKP+N+LLD L+ KI DFG+ ++T+ +F +++ GS Y
Sbjct: 119 CHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFLKTSC--GSPNY 168
Query: 514 ADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLP 546
A PE + P+ D +S G+I+ +L RLP
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 32/287 (11%)
Query: 350 VGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC- 406
+G+G FG K G + +K L + + Q F +EV+V+ L+HP+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 407 -PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
+ + + EY+ G+L+ + KS S W R A +IASG+ +LHS I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHR 132
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTED--------TLYLPSFHRSTAPKGSFPYADPE 517
DL N L+ + + DFG+ RL+ ++ +L P + G+ + PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG-KLSSILDPLAGDWPTF 576
K D +SFG+++ +++ GR+ + R + G + LD P
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII-GRVNAD-PDYLPRTMDFGLNVRGFLDRYC---PPN 247
Query: 577 VARRLVDLGLQCCELYGRERPDITPSLVK-----ELEQLHVAEERPV 618
+ ++CC+L P+ PS VK E ++H+A P+
Sbjct: 248 CPPSFFPITVRCCDL----DPEKRPSFVKLEHWLETLRMHLAGHLPL 290
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 130
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 131 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 185
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 132
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 133 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 187
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 163
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 164 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 218
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 26/214 (12%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKM-----LYSHNMQGQLEFQQEVRVLSKLQ 395
N+ +G+G FG V G+ VA+K+ L +MQG++E +E+ L L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 396 HPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
HPH++ L + +V EY N L D + ++ +S ++ R +I S + +
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE---QEARRFFQQIISAVEY 122
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
H KIVH DLKP+N+LLD L+ KI DFG+ ++T+ +F +++ GS Y
Sbjct: 123 CHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFLKTSC--GSPNY 172
Query: 514 ADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLP 546
A PE + P+ D +S G+I+ +L RLP
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 350 VGQGGFGCV-----YKGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVT 401
+G+G FG V YK + + VA+K + ++ + ++E+ L L+HPH++
Sbjct: 17 LGEGSFGKVKLATHYKTQ---QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 402 LLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L P +V EY G L D + K ++ + R +I + + H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTE---DEGRRFFQQIICAIEYCHR--- 126
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
KIVH DLKP+N+LLD L+ KI DFG+ ++T+ +F +++ GS YA PE
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-----NFLKTSC--GSPNYAAPEVI 179
Query: 520 RTGVLT-PKSDSYSFGLIILQLLTGRLP 546
+ P+ D +S G+++ +L GRLP
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 150
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 151 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 205
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ EYLP GSL+D L + K + + + ++I G+ +L +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 150
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 151 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 205
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 350 VGQGGFG----CVY--KGEMLGRTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTL 402
+G+G FG C Y +G+ G VA+K L + + + ++E+ +L L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 403 LGACPE----AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
G C E L+ E+LP+GSL++ L + N L K + + A +I G+ +L S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS-- 144
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+ VH DL +N+L++SE KI DFG+ + + D +P F YA PE
Sbjct: 145 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP--VFWYA-PEC 200
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
SD +SFG+ + +LLT
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G + L + S + A E+A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 350 VGQGGFG----CVY--KGEMLGRTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTL 402
+G+G FG C Y +G+ G VA+K L + + + ++E+ +L L H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 403 LGACPE----AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
G C E L+ E+LP+GSL++ L + N L K + + A +I G+ +L S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS-- 132
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+ VH DL +N+L++SE KI DFG+ + + D +P F YA PE
Sbjct: 133 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP--VFWYA-PEC 188
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
SD +SFG+ + +LLT
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVYKGEMLGR--TVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY R +A+K+L+ ++ + + ++EV + S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 117
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 118 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 166
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 35/238 (14%)
Query: 344 FSESFKV----GQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQ 395
F+E + + G+G FG V K + + A+K++ + + + +EV +L KL
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 396 HPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
HP+++ L ++ S +V E G L D + ++ S D ARI ++ SG+ +
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVFSGITY 136
Query: 454 LHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFHRSTAPK-- 508
+H IVH DLKP+NILL+S + KI DFG+ F ++T K
Sbjct: 137 MH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----------TCFQQNTKMKDR 183
Query: 509 -GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLS 563
G+ Y PE R G K D +S G+I+ LL+G P E + + V GK +
Sbjct: 184 IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EI 447
L+HP+++ L G +A L+ EY P G++ L + S D R A E+
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF------DEQRTATYITEL 134
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T
Sbjct: 135 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC 184
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 185 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 20/221 (9%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKML--YSHNMQGQLEFQQEV 388
S AD Q N+ +G+G F V + GR VAIK++ N + +EV
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREV 65
Query: 389 RVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE 446
R++ L HP++V L + L+ EY G + D L + + + R +
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---Q 122
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
I S + + H ++IVH DLK +N+LLD++++ KI DFG T + A
Sbjct: 123 IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-------KLDA 172
Query: 507 PKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 350 VGQGGFGCVY------KGEMLGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+G FG V + G VA+K L + Q + ++QE+ +L L H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 403 LGACPE----AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSS 457
G C + + LV EY+P GSL+D L R S ++ LL A +I G+ +LHS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-----FAQQICEGMAYLHS- 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ +H +L +N+LLD++ KI DFG+ + V E Y +P F YA PE
Sbjct: 136 --QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYA-PE 190
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+ + +LLT
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EI 447
L+HP+++ L G +A L+ EY P G++ L + S D R A E+
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF------DEQRTATYITEL 143
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTL- 192
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 349 KVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
K+G G FG V+ T VA+K + +M + F E V+ LQH LV L
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSN---VSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
E ++ E++ GSL D F KS+ PL +A+IA G+ F+ +
Sbjct: 248 KEPIYIITEFMAKGSLLD--FLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYI 300
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV 523
H DL+ NIL+ + L KI DFG+ R+ K + PE G
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV---------------GAKFPIKWTAPEAINFGS 345
Query: 524 LTPKSDSYSFGLIILQLLT-GRLPV-GLAG-EVRRAVSCG 560
T KSD +SFG+++++++T GR+P G++ EV RA+ G
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 385
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 172
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 172
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG + + PS R+T G+
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SCHAPSSRRTTL-SGT 170
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 350 VGQGGFGCVY------KGEMLGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+G FG V + G VA+K L + Q + ++QE+ +L L H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 403 LGACPEAWS----LVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSS 457
G C +A + LV EY+P GSL+D L R S ++ LL A +I G+ +LH+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-----FAQQICEGMAYLHA- 152
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ +H DL +N+LLD++ KI DFG+ + V E +P F YA PE
Sbjct: 153 --QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP--VFWYA-PE 207
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+ + +LLT
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQG-GFGCVYKGEM-----LGRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GFG + + + L R VA+K+L + + L F++E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 65 NAAALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NI++ + + K+ DFGI R + + S
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG---NSVT 174
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 350 VGQGGFGCVY------KGEMLGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+G FG V + G VA+K L + Q + ++QE+ +L L H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 403 LGACPE----AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSS 457
G C + + LV EY+P GSL+D L R S ++ LL A +I G+ +LH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-----FAQQICEGMAYLHA- 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ +H +L +N+LLD++ KI DFG+ + V E Y +P F YA PE
Sbjct: 136 --QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYA-PE 190
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+ + +LLT
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQL--EF 384
L ++ + F E ++G+ FG VYKG + G + VAIK L +G L EF
Sbjct: 20 LKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEF 76
Query: 385 QQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ E + ++LQHP++V LLG + S+++ Y +G L + L +S S + D R
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 443 -------------IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+ A+IA+G+ +L S +VH DL +N+L+ +L+ KI D G+ R
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 490 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 549
V Y S P + PE G + SD +S+G+++ ++ + L
Sbjct: 194 EVYAAD-YYKLLGNSLLP---IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
Query: 550 AGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP 597
+ V + +L P D P +V L ++C + RP
Sbjct: 250 GYSNQDVVEMIRNRQVL-PCPDDCPAWVYA----LMIECWNEFPSRRP 292
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQ----GGFGCVYKGEML--GRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GG V+ L R VA+K+L + + L F++E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NIL+ + + K+ DFGI R + + S
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG---NSVX 174
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDTLC-GT 170
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 124
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 173
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 119
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 120 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 168
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G + L + S + A E+A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R G+
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXL-XGT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE- 408
+G+G FG V G+ G VA+K + N F E V+++L+H +LV LLG E
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 409 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
+V EY+ GSL D L R S L + + ++ + +L + VH D
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 467 LKPQNILLDSELSSKICDFGICRLV--TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
L +N+L+ + +K+ DFG+ + T+DT LP + PE R
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----------VKWTAPEALREAAF 182
Query: 525 TPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + GR+P
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVP 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ K+G+G FG V+KG + VAIK++ + QQE+ VLS+ P++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 401 TLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G+ + W ++ EYL GS D L PL A I EI GL +LHS
Sbjct: 69 KYYGSYLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS- 122
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
EK +H D+K N+LL K+ DFG+ +T+ + +F G+ + PE
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF------VGTPFWMAPE 174
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+GQG G VY + G+ VAI+ + + E+ V+ + ++P++V L +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 407 ---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSSKPE 460
E W +V EYL GSL D + D +IAA E L FLHS++
Sbjct: 87 LVGDELW-VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
++H D+K NILL + S K+ DFG C +T P + + G+ + PE
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------PEQSKRSTMVGTPYWMAPEVVT 189
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
PK D +S G++ ++++ G P
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLVTLL 403
K+GQG G VY + G+ VAI+ + N+Q Q + + E+ V+ + ++P++V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSS 457
+ E W +V EYL GSL D + D +IAA E L FLHS+
Sbjct: 85 DSYLVGDELW-VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN 136
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ ++H D+K NILL + S K+ DFG C +T P + + G+ + PE
Sbjct: 137 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------PEQSKRSXMVGTPYWMAPE 187
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PK D +S G++ ++++ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQG-GFGCVYKGEM-----LGRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GFG + + + L R VA+K+L + + L F++E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NI++ + + K+ DFGI R + + S
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG---NSVT 174
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLVTLL 403
K+GQG G VY + G+ VAI+ + N+Q Q + + E+ V+ + ++P++V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSS 457
+ E W +V EYL GSL D + D +IAA E L FLHS+
Sbjct: 84 DSYLVGDELW-VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ ++H D+K NILL + S K+ DFG C +T P + + G+ + PE
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------PEQSKRSXMVGTPYWMAPE 186
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PK D +S G++ ++++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 349 KVGQGGFGCVYKGEM---LGRTV--AIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLV 400
K+G G FG V +GE G+TV A+K L + + +F +EV + L H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 401 TLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L G +V E P GSL DRL + + L +R A ++A G+ +L S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES--- 129
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++ +H DL +N+LL + KI DFG+ R L D + HR K F + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR----KVPFAWCAPES 185
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLP-VGLAG 551
+T + SD++ FG+ + ++ T G+ P +GL G
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQL--EF 384
L ++ + F E ++G+ FG VYKG + G + VAIK L +G L EF
Sbjct: 3 LKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEF 59
Query: 385 QQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ E + ++LQHP++V LLG + S+++ Y +G L + L +S S + D R
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 443 -------------IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+ A+IA+G+ +L S +VH DL +N+L+ +L+ KI D G+ R
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 490 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 549
V Y S P + PE G + SD +S+G+++ ++ + L
Sbjct: 177 EVYAAD-YYKLLGNSLLP---IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 550 AGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP 597
+ V + +L P D P +V L ++C + RP
Sbjct: 233 GYSNQDVVEMIRNRQVL-PCPDDCPAWVYA----LMIECWNEFPSRRP 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 29/236 (12%)
Query: 343 NFSESFKV----GQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKL 394
F+E + + G+G FG V K + + A+K++ + + + +EV +L KL
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 395 QHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
HP+++ L ++ S +V E G L D + ++ S D ARI ++ SG+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVFSGIT 135
Query: 453 FLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
++H IVH DLKP+NILL+S + KI DFG+ ++T + G
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-------KMKDRIG 185
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLS 563
+ Y PE R G K D +S G+I+ LL+G P E + + V GK +
Sbjct: 186 TAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKML--YSHNMQGQLEFQQEVRV 390
+D Q N+ +G+G F V + GR VAIK++ N + +EVR+
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 391 LSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
+ L HP++V L + L+ EY G + D L + + + R +I
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIV 121
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
S + + H ++IVH DLK +N+LLD++++ KI DFG T L +F
Sbjct: 122 SAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDTFC------ 171
Query: 509 GSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R+T G+
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLC-GT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE K D +S G++ + L G+ P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLVTLL 403
K+GQG G VY + G+ VAI+ + N+Q Q + + E+ V+ + ++P++V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSS 457
+ E W +V EYL GSL D + D +IAA E L FLHS+
Sbjct: 84 DSYLVGDELW-VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ ++H D+K NILL + S K+ DFG C +T P + + G+ + PE
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------PEQSKRSEMVGTPYWMAPE 186
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PK D +S G++ ++++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQE 387
++ Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 388 VRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
V + S L+HP+++ L G +A L+ EY P G++ L + S + A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYIT 118
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
E+A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRA 167
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
A G+ Y PE + K D +S G++ + L G+ P
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVR 389
A Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEI 447
+ S L+HP+++ L G +A L+ EY P G++ L + S + A E+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITEL 117
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R A
Sbjct: 118 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRAAL 166
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 29/236 (12%)
Query: 343 NFSESFKV----GQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKL 394
F+E + + G+G FG V K + + A+K++ + + + +EV +L KL
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 395 QHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
HP+++ L ++ S +V E G L D + ++ S D ARI ++ SG+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVFSGIT 135
Query: 453 FLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
++H IVH DLKP+NILL+S + KI DFG+ ++T + G
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-------KMKDRIG 185
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLS 563
+ Y PE R G K D +S G+I+ LL+G P E + + V GK +
Sbjct: 186 TAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 20/221 (9%)
Query: 333 SLADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKML--YSHNMQGQLEFQQEV 388
S D Q N+ +G+G F V + + GR VA+K++ N + +EV
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREV 65
Query: 389 RVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE 446
R++ L HP++V L + LV EY G + D L + + + R +
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---Q 122
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
I S + + H + IVH DLK +N+LLD +++ KI DFG T L +F
Sbjct: 123 IVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN-KLDTFC---- 174
Query: 507 PKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 175 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ K+G+G FG V+KG + VAIK++ + QQE+ VLS+ P++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 401 TLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G+ + W ++ EYL GS D L PL A I EI GL +LHS
Sbjct: 84 KYYGSYLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS- 137
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
EK +H D+K N+LL K+ DFG+ +T+ + F G+ + PE
Sbjct: 138 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF------VGTPFWMAPE 189
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQG-GFGCVYKGEM-----LGRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GFG + + + L R VA+K+L + + L F++E +
Sbjct: 22 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 81
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 82 NAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 137
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NI++ + + K+ DFGI R + + S
Sbjct: 138 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG---NSVT 191
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 29/266 (10%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVS-------PLLWKDRARIAAEIASGL 451
LLGAC + + EY G L + L RK+ PL +D ++++A G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+ + K
Sbjct: 174 AFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--- 227
Query: 512 PYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAG 571
+ PE V T +SD +S+G+++ ++ + +GL V+ + D
Sbjct: 228 -WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVKDGYQM 282
Query: 572 DWPTFVARRLVDLGLQCCELYGRERP 597
P F + + + C L RP
Sbjct: 283 AQPAFAPKNIYSIMQACWALEPTHRP 308
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 340 ATCNFSESFKV-GQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSK 393
T N E K+ G+G FG V K + GR A+K+L + + E E RVL
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 394 LQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
+HP L L + + V EY G L L R+ S +DRAR AEI S
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----EDRARFYGAEIVSA 121
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L +LHS K +V+ DLK +N++LD + KI DFG+C+ +D + F G+
Sbjct: 122 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC------GT 173
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE D + G+++ +++ GRLP
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 29/266 (10%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVS-------PLLWKDRARIAAEIASGL 451
LLGAC + + EY G L + L RK+ PL +D ++++A G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+ + K
Sbjct: 166 AFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--- 219
Query: 512 PYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAG 571
+ PE V T +SD +S+G+++ ++ + +GL V+ + D
Sbjct: 220 -WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVKDGYQM 274
Query: 572 DWPTFVARRLVDLGLQCCELYGRERP 597
P F + + + C L RP
Sbjct: 275 AQPAFAPKNIYSIMQACWALEPTHRP 300
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 349 KVGQGGFG----CVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
++G+G FG C Y + G VA+K L + +F++E+ +L LQH ++V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 403 LGACPEA----WSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G C A L+ E+LP GSL++ L + K + + + ++I G+ +L +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI---KLLQYTSQICKGMEYLGT- 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++ +H DL +NIL+++E KI DFG+ +++ +D +P F YA PE
Sbjct: 136 --KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP--IFWYA-PE 190
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
+ SD +SFG+++ +L T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 340 ATCNFSESFKV-GQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSK 393
T N E K+ G+G FG V K + GR A+K+L + + E E RVL
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 394 LQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
+HP L L + + V EY G L L R+ S +DRAR AEI S
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----EDRARFYGAEIVSA 122
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L +LHS K +V+ DLK +N++LD + KI DFG+C+ +D + F G+
Sbjct: 123 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC------GT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE D + G+++ +++ GRLP
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 340 ATCNFSESFKV-GQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSK 393
T N E K+ G+G FG V K + GR A+K+L + + E E RVL
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 394 LQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
+HP L L + + V EY G L L R+ S +DRAR AEI S
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----EDRARFYGAEIVSA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L +LHS K +V+ DLK +N++LD + KI DFG+C+ +D + F G+
Sbjct: 121 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC------GT 172
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE D + G+++ +++ GRLP
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ K+G+G FG V+KG + VAIK++ + QQE+ VLS+ P++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 401 TLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G+ + W ++ EYL GS D L PL A I EI GL +LHS
Sbjct: 89 KYYGSYLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS- 142
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
EK +H D+K N+LL K+ DFG+ +T+ + +F G+ + PE
Sbjct: 143 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF------VGTPFWMAPE 194
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE- 408
+G+G FG V G+ G VA+K + N F E V+++L+H +LV LLG E
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 409 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
+V EY+ GSL D L R S L + + ++ + +L + VH D
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 142
Query: 467 LKPQNILLDSELSSKICDFGICRLV--TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
L +N+L+ + +K+ DFG+ + T+DT LP + PE R
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----------VKWTAPEALREKKF 191
Query: 525 TPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + GR+P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 122 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTDLCGT 170
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ K+G+G FG V+KG + VAIK++ + QQE+ VLS+ P++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 401 TLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G+ + W ++ EYL GS D L PL A I EI GL +LHS
Sbjct: 69 KYYGSYLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS- 122
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
EK +H D+K N+LL K+ DFG+ +T+ + F G+ + PE
Sbjct: 123 --EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF------VGTPFWMAPE 174
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTDLCGT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTELCGT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTDLCGT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNV-----------SPLLWKDRARIAAEI 447
LLGAC + + EY G L + L RKS V S L +D ++++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A G+ FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+ +
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
K + PE V T +SD +S+G+++ ++ + +GL V+ + D
Sbjct: 231 K----WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVKD 282
Query: 568 PLAGDWPTFVARRLVDLGLQCCELYGRERP 597
P F + + + C L RP
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRP 312
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE- 408
+G+G FG V G+ G VA+K + N F E V+++L+H +LV LLG E
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 409 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
+V EY+ GSL D L R S L + + ++ + +L + VH D
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 467 LKPQNILLDSELSSKICDFGICRLV--TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
L +N+L+ + +K+ DFG+ + T+DT LP + PE R
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----------VKWTAPEALREKKF 363
Query: 525 TPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + GR+P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVP 386
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTXLCGT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 134/299 (44%), Gaps = 54/299 (18%)
Query: 350 VGQGGFGCVYKG---EMLGR----TVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVT 401
+G+G FG V K + GR TVA+KML + +L + E VL ++ HPH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 402 LLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSP---------------------LLWK 438
L GAC + L+ EY GSL+ L V P L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
D A +I+ G+ +L K +VH DL +NIL+ KI DFG+ R V E+ Y+
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 499 PSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA 556
RS +G P + E + T +SD +SFG+++ +++T L G
Sbjct: 208 ---KRS---QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------LGGNPYPG 255
Query: 557 VSCGKLSSILDPLAG---DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 612
+ +L ++L G + P + + L LQC + +RP + + K+LE++ V
Sbjct: 256 IPPERLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRP-VFADISKDLEKMMV 311
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI +FG +++ PS R+T G+
Sbjct: 123 LSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGW-------SVHAPSSRRTTLC-GT 171
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE- 408
+G+G FG V G+ G VA+K + N F E V+++L+H +LV LLG E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 409 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
+V EY+ GSL D L R S L + + ++ + +L + VH D
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 127
Query: 467 LKPQNILLDSELSSKICDFGICRLV--TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
L +N+L+ + +K+ DFG+ + T+DT LP + PE R
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----------VKWTAPEALREKKF 176
Query: 525 TPKSDSYSFGLIILQLLT-GRLP 546
+ KSD +SFG+++ ++ + GR+P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQ----GGFGCVYKGEML--GRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GG V+ L R VA+K+L + + L F++E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NI++ + + K+ DFGI R + + S
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG---NSVT 174
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R T G+
Sbjct: 126 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRTDLCGT 174
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 339 TATCNFSESFKVGQ----GGFGCVYKGEML--GRTVAIKML---YSHNMQGQLEFQQEVR 389
T + S+ +++G+ GG V+ L R VA+K+L + + L F++E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 390 VLSKLQHPHLVTLLG-------ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+ L HP +V + A P + +V EY+ +L+D + + ++P K
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTP---KRAIE 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+ A+ L F H + I+H D+KP NI++ + + K+ DFGI R + + S
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG---NSVT 174
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
++ A G+ Y PE R + +SD YS G ++ ++LTG P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVR 389
A Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 390 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEI 447
+ S L+HP+++ L G ++ L+ EY P G++ L + S + A E+
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITEL 117
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A+ L + HS +K++H D+KP+N+LL S KI DFG +++ PS R A
Sbjct: 118 ANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPS-SRRAAL 166
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI +FG +++ PS R+T G+
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGW-------SVHAPSSRRTTLC-GT 172
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ ++G+G FG VYKG VAIK++ + QQE+ VLS+ P++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
G+ ++ L + EYL GS D L PL A I EI GL +LHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHS-- 134
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
E+ +H D+K N+LL + K+ DFG+ +T+ + F G+ + PE
Sbjct: 135 -ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF------VGTPFWMAPEV 187
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EI 447
L+HP+++ L G +A L+ EY P G++ L + S D R A E+
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF------DEQRTATYITEL 143
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R
Sbjct: 144 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDL- 192
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 349 KVGQGGFGCVYKGEMLGRT-------VAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVT 401
++G+G FG V+ E VA+K L + + +F +E +L+ LQH H+V
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 402 LLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKD-----------RARIAAEIA 448
G C E +V+EY+ +G L ++ R +L + IA +IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
+G+ +L S + VH DL +N L+ L KI DFG+ R V Y H + P
Sbjct: 139 AGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH-TMLPI 194
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
P PE T +SD +S G+++ ++ T G+ P
Sbjct: 195 RWMP---PESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 37/225 (16%)
Query: 348 FKVGQGGFGCVYKGE----------MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP 397
+++G+G FG V+ E ML VA+K L + + +FQ+E +L+ LQH
Sbjct: 47 WELGEGAFGKVFLAECHNLLPEQDKML---VAVKALKEASESARQDFQREAELLTMLQHQ 103
Query: 398 HLVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRAR 442
H+V G C E L V+EY+ +G L +R R PL
Sbjct: 104 HIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+A+++A+G+ +L VH DL +N L+ L KI DFG+ R + T Y
Sbjct: 163 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG 218
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
R+ P P Y + T +SD +SFG+++ ++ T G+ P
Sbjct: 219 RTMLPIRWMPPESILYRK---FTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 37/225 (16%)
Query: 348 FKVGQGGFGCVYKGE----------MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP 397
+++G+G FG V+ E ML VA+K L + + +FQ+E +L+ LQH
Sbjct: 24 WELGEGAFGKVFLAECHNLLPEQDKML---VAVKALKEASESARQDFQREAELLTMLQHQ 80
Query: 398 HLVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRAR 442
H+V G C E L V+EY+ +G L +R R PL
Sbjct: 81 HIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+A+++A+G+ +L VH DL +N L+ L KI DFG+ R + T Y
Sbjct: 140 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG 195
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
R+ P P PE T +SD +SFG+++ ++ T G+ P
Sbjct: 196 RTMLPIRWMP---PESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLVTLL 403
K+GQG G VY + G+ VAI+ + N+Q Q + + E+ V+ + ++P++V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA---EIASGLCFLHSS 457
+ E W +V EYL GSL D + D +IAA E L FLHS+
Sbjct: 85 DSYLVGDELW-VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN 136
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ ++H ++K NILL + S K+ DFG C +T P + + G+ + PE
Sbjct: 137 Q---VIHRNIKSDNILLGMDGSVKLTDFGFCAQIT------PEQSKRSTMVGTPYWMAPE 187
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PK D +S G++ ++++ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 37/225 (16%)
Query: 348 FKVGQGGFGCVYKGE----------MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP 397
+++G+G FG V+ E ML VA+K L + + +FQ+E +L+ LQH
Sbjct: 18 WELGEGAFGKVFLAECHNLLPEQDKML---VAVKALKEASESARQDFQREAELLTMLQHQ 74
Query: 398 HLVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRAR 442
H+V G C E L V+EY+ +G L +R R PL
Sbjct: 75 HIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
+A+++A+G+ +L VH DL +N L+ L KI DFG+ R + T Y
Sbjct: 134 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG 189
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
R+ P P PE T +SD +SFG+++ ++ T G+ P
Sbjct: 190 RTMLPIRWMP---PESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 146 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRK 198
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E E+ +L L HP+++ L + + LV E+ G L +++ + D
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC---DA 148
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLY 497
A I +I SG+C+LH IVH D+KP+NILL+++ L+ KI DFG+ ++D
Sbjct: 149 ANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--- 202
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG 548
++ G+ Y PE + K D +S G+I+ LL G P G
Sbjct: 203 ----YKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPFG 248
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+K+ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR++ L HP++V L + LV EY G + D L + + + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++++ KI DFG T ++
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-------NKLD 170
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
A G+ PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 44/298 (14%)
Query: 350 VGQGGFGCVYKGEMLGRT-------VAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V G + VA+KML + E E++++++L H ++V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 401 TLLGACPEA--WSLVYEYLPNGSL--------------------QDRLFRKSNVSPLLWK 438
LLGAC + L++EY G L Q RL + +++ L ++
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
D A ++A G+ FL + VH DL +N+L+ KICDFG+ R + D+ Y+
Sbjct: 173 DLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS 558
+ K + PE G+ T KSD +S+G+++ ++ + +G+ V
Sbjct: 230 VRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEIFS----LGVNPYPGIPVD 281
Query: 559 CGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE-QLHVAEE 615
I + D P + + + C R+RP P+L L QL AEE
Sbjct: 282 ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-PNLTSFLGCQLADAEE 338
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+K+ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR++ L HP++V L + LV EY G + D L + + + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++++ KI DFG T L +F
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFC--- 173
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+K+ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR++ L HP++V L + LV EY G + D L + + + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++++ KI DFG T L +F
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFC--- 173
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEV 388
L Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 389 RVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE 446
+ S L+HP+++ L G +A L+ EY P G++ L + S + A E
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITE 119
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
+A+ L + HS ++++H D+KP+N+LL S KI DFG +++ PS R
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDL 169
Query: 507 PKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + K D +S G++ + L G+ P
Sbjct: 170 -CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R G+
Sbjct: 123 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLC-GT 171
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 155 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRK 207
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 146 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRK 198
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R G+
Sbjct: 124 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLC-GT 172
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 350 VGQGGFGCVYKGEMLGRT-----VAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG VY GE + + AIK L Q+E F +E ++ L HP+++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 404 GAC--PEAW-SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G PE ++ Y+ +G L + R +P + KD ++A G+ +L +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLL-QFIRSPQRNPTV-KDLISFGLQVARGMEYLAE---Q 143
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
K VH DL +N +LD + K+ DFG+ R + + Y HR + + E +
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA--RLPVKWTALESLQ 201
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T T KSD +SFG+++ +LLT P
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN-VSPL--LWKDRARI------AAEIA 448
LLGAC + ++ E+ G+L L K N P L+KD + + ++A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R +
Sbjct: 155 KGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKGDAR 207
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ PE V T +SD +SFG+++ ++ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 192 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRK 244
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 343 NFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHP 397
+F +G+G FG VY + +A+K+L+ ++ + + ++EV + S L+HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 398 HLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 455
+++ L G +A L+ EY P G++ L + S + A E+A+ L + H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYCH 129
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
S ++++H D+KP+N+LL S KI DFG +++ PS R+T G+ Y
Sbjct: 130 S---KRVIHRDIKPENLLLGSNGELKIADFGW-------SVHAPSSRRTTLC-GTLDYLP 178
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE + K D +S G++ + L G P
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 338 QTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLS 392
Q A +F +G+G FG VY + + +A+K+L+ ++ + + ++EV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 393 KLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L+HP+++ L G +A L+ EY P G++ L + S + A E+A+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L + HS ++++H D+KP+N+LL S KI DFG +++ PS R G+
Sbjct: 121 LSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLC-GT 169
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y PE + K D +S G++ + L G+ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 350 VGQGGFGCVYKGEM----LGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKL-QHPHLVTLL 403
+G+G FG V K + L AIK + + + +F E+ VL KL HP+++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNV--------------SPLLWKDRARIAAEI 447
GAC L EY P+G+L D L RKS V S L + AA++
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A G+ +L ++ +H DL +NIL+ +KI DFG+ R +Y+ + T
Sbjct: 142 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYV----KKTMG 191
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL- 566
+ + E V T SD +S+G+++ ++ V L G ++C +L L
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI------VSLGGTPYCGMTCAELYEKLP 245
Query: 567 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH-VAEER 616
+ P + DL QC RE+P PS + L L+ + EER
Sbjct: 246 QGYRLEKPLNCDDEVYDLMRQCW----REKPYERPSFAQILVSLNRMLEER 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 350 VGQGGFGCVYKGEM----LGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKL-QHPHLVTLL 403
+G+G FG V K + L AIK + + + +F E+ VL KL HP+++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNV--------------SPLLWKDRARIAAEI 447
GAC L EY P+G+L D L RKS V S L + AA++
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A G+ +L ++ +H DL +NIL+ +KI DFG+ R +Y+ + T
Sbjct: 152 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYV----KKTMG 201
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL- 566
+ + E V T SD +S+G+++ ++ V L G ++C +L L
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI------VSLGGTPYCGMTCAELYEKLP 255
Query: 567 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH-VAEER 616
+ P + DL QC RE+P PS + L L+ + EER
Sbjct: 256 QGYRLEKPLNCDDEVYDLMRQCW----REKPYERPSFAQILVSLNRMLEER 302
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 331 EFSLADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQ--GQLEFQQ 386
++SL D Q +G G FG V+ + GR A+K+L + Q+E
Sbjct: 2 KYSLQDFQILRT-------LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN 54
Query: 387 EVRV-LSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+ R+ LS + HP ++ + G +A ++ +Y+ G L L RKS P A+
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFP---NPVAKF 110
Query: 444 -AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
AAE+ L +LHS + I++ DLKP+NILLD KI DFG + V + T L
Sbjct: 111 YAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL---- 163
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE T D +SFG++I ++L G P
Sbjct: 164 -----CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNV-----------SPLLWKDRARIAAEI 447
LLGAC + + EY G L + L RKS V S +D ++++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A G+ FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+ +
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
K + PE V T +SD +S+G+++ ++ + +GL V+ + D
Sbjct: 231 K----WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVKD 282
Query: 568 PLAGDWPTFVARRLVDLGLQCCELYGRERP 597
P F + + + C L RP
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRP 312
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 350 VGQGGFGCVY------KGEMLGRTVAIKMLYSHNMQGQLE--FQQEVRVLSKLQHPHLVT 401
+G+G FG V + G VA+K L QL +Q+E+ +L L H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 402 LLGACPE----AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHS 456
G C + + LV EY+P GSL+D L R ++ LL A +I G+ +LH+
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-----FAQQICEGMAYLHA 129
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
+ +H L +N+LLD++ KI DFG+ + V E Y +P F YA P
Sbjct: 130 ---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYA-P 183
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLT 542
E + SD +SFG+ + +LLT
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLLGAC 406
+G GGF V + G VAIK++ + + L + E+ L L+H H+ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 407 PEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIV 463
A +V EY P G L D + + +S ++ R+ +I S + ++HS +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLS----EEETRVVFRQIVSAVAYVHS---QGYA 130
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHRTG 522
H DLKP+N+L D K+ DFG+C + +H T GS YA PE
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK----DYHLQTCC-GSLAYAAPELIQGKS 185
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
L ++D +S G+++ L+ G LP
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLP 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 146 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----PDXVRK 198
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 350 VGQGGFGCVY------KGEMLGRTVAIKMLYSHNMQGQLE--FQQEVRVLSKLQHPHLVT 401
+G+G FG V + G VA+K L QL +Q+E+ +L L H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 402 LLGACPE----AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHS 456
G C + + LV EY+P GSL+D L R ++ LL A +I G+ +LH+
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-----FAQQICEGMAYLHA 130
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
+ +H L +N+LLD++ KI DFG+ + V E Y +P F YA P
Sbjct: 131 ---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--VFWYA-P 184
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLT 542
E + SD +SFG+ + +LLT
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+++ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR++ L HP++V L + LV EY G + D L + + + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++++ KI DFG T L +F
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFC--- 173
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 343 NFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHP 397
+F +G+G FG VY + +A+K+L+ ++ + + ++EV + S L+HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 398 HLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 455
+++ L G +A L+ EY P G++ L + S + A E+A+ L + H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYCH 129
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
S ++++H D+KP+N+LL S KI DFG +++ PS R T G+ Y
Sbjct: 130 S---KRVIHRDIKPENLLLGSNGELKIADFGW-------SVHAPSSRRDTLC-GTLDYLP 178
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE + K D +S G++ + L G P
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 125
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DL +N L++ + K+ DFG+ R V +D + S K ++ PE
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 180
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 346 ESFKVG----QGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLE-FQQEVRVLSKLQH 396
E FKVG +G F VY+ E + G VAIKM+ M G ++ Q EV++ +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P ++ L ++ LV E NG + L K+ V P + +I +G+ +L
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYL 128
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
HS I+H DL N+LL ++ KI DFG+ L +P T G+ Y
Sbjct: 129 HS---HGILHRDLTLSNLLLTRNMNIKIADFGLA-----TQLKMPHEKHYTLC-GTPNYI 179
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE +SD +S G + LL GR P
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 146 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----PDXVRK 198
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 27/208 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 126
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYH 519
+H DL +N L++ + K+ DFG+ R V +D T+ +GS FP ++ PE
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--------EYTSSRGSKFPVRWSPPEVL 178
Query: 520 RTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 155 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----PDXVRK 207
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 350 VGQGGFGCVYKG---EMLGR----TVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVT 401
+G+G FG V K + GR TVA+KML + +L + E VL ++ HPH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 402 LLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSP---------------------LLWK 438
L GAC + L+ EY GSL+ L V P L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
D A +I+ G+ +L K +VH DL +NIL+ KI DFG+ R V E+
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED--- 204
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS 558
S + + + + E + T +SD +SFG+++ +++T L G +
Sbjct: 205 -SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------LGGNPYPGIP 257
Query: 559 CGKLSSILDPLAG---DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 612
+L ++L G + P + + L LQC + +RP + + K+LE++ V
Sbjct: 258 PERLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRP-VFADISKDLEKMMV 311
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 121
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DL +N L++ + K+ DFG+ R V +D + S K ++ PE
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 176
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 126
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DL +N L++ + K+ DFG+ R V +D + S K ++ PE
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 181
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+++ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR++ L HP++V L + LV EY G + D L + + + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++++ KI DFG T L F
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDEFC--- 173
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 132
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DL +N L++ + K+ DFG+ R V +D + S K ++ PE
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 187
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN------VSPL-LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N V+P L+KD + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 155 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDXVRK 207
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 141
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DL +N L++ + K+ DFG+ R V +D + S K ++ PE
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 196
Query: 523 VLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN-VSPL------LWKDRARI------A 444
LLGAC + ++ E+ G+L L K N P L+KD + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 504
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 157 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRK 209
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 350 VGQGGFGCVYKGEM----LGRTVAIKMLYSH-NMQGQLEFQQEVRVLSKL-QHPHLVTLL 403
+G+G FG V K + L AIK + + + +F E+ VL KL HP+++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNV--------------SPLLWKDRARIAAEI 447
GAC L EY P+G+L D L RKS V S L + AA++
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
A G+ +L ++ +H +L +NIL+ +KI DFG+ R +Y+ + T
Sbjct: 149 ARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYV----KKTMG 198
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL- 566
+ + E V T SD +S+G+++ ++ V L G ++C +L L
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI------VSLGGTPYCGMTCAELYEKLP 252
Query: 567 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH-VAEER 616
+ P + DL QC RE+P PS + L L+ + EER
Sbjct: 253 QGYRLEKPLNCDDEVYDLMRQCW----REKPYERPSFAQILVSLNRMLEER 299
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQ-GQLEFQQEVRV 390
L D + C +G+GGFG V+ K ++ AIK + N + + + +EV+
Sbjct: 4 LTDFEPIQC-------LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA 56
Query: 391 LSKLQHPHLVTLLGACPEAWSL---------VYEYLPNGSLQDRLFRKSNVSPLL----- 436
L+KL+HP +V A E + VY Y+ Q +L RK N+ +
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYI-----QMQLCRKENLKDWMNGRCT 111
Query: 437 WKDRAR-----IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 491
++R R I +IA + FLHS + ++H DLKP NI + K+ DFG+ +
Sbjct: 112 IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
Query: 492 TED------TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
+D +P++ R T G+ Y PE + K D +S GLI+ +LL
Sbjct: 169 DQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN-VSPL----LWKDRARI------AAE 446
LLGAC + ++ E+ G+L L K N P L+KD + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTA 506
+A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 157 VAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD----PDXVRKGD 209
Query: 507 PKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA 409
+G+G +G VYKG + R VA+K+ N Q + + RV ++H ++ +
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRV-PLMEHDNIARFIVGDERV 79
Query: 410 -------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE-- 460
+ LV EY PNGSL L ++ W R+A + GL +LH+ P
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 461 ----KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYA 514
I H DL +N+L+ ++ + I DFG+ +T + L P + A G+ Y
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 515 DPEYHRTGV-------LTPKSDSYSFGLIILQLL 541
PE V + D Y+ GLI ++
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 350 VGQGGFGCVYK-----GEMLGRTVAIKMLYS----HNMQGQLEFQQEVRVLSKLQHPHLV 400
+G+GG+G V++ G G+ A+K+L N + + E +L +++HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSS 457
L+ A L + EYL G L +L R+ + +D A AEI+ L LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQ- 139
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ I++ DLKP+NI+L+ + K+ DFG+C+ D +F G+ Y PE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC------GTIEYMAPE 191
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 555
D +S G ++ +LTG P GE R+
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRK 227
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN-VSPL-----LWKDRARI------AA 445
LLGAC + ++ E+ G+L L K N P L+KD + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P R
Sbjct: 156 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----PDXVRKG 208
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA-- 405
+G G FG V+K E G +A K++ + M+ + E + E+ V+++L H +L+ L A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
LV EY+ G L DR+ +S N++ L D +I G+ +H I+H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTEL---DTILFMKQICEGIRHMHQMY---ILH 210
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLKP+NIL + + KI DFG+ R Y P + G+ + PE
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLAR------RYKPR-EKLKVNFGTPEFLAPEVVNYD 263
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
++ +D +S G+I LL+G P
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQ 386
+ADL ++ +G+G F V + G+ VA+K+ L S ++Q + +
Sbjct: 1 MADLHIGNYRLLKT--IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFR 55
Query: 387 EVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA 444
EVR++ L HP++V L + LV EY G + D L W
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------WMKEKEAR 109
Query: 445 A---EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 501
A +I S + + H + IVH DLK +N+LLD++++ KI DFG T L +F
Sbjct: 110 AKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTF 165
Query: 502 HRSTAPKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
GS PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 166 C------GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 349 KVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
++G G FG V G+ G+ VAIKM+ +M + EF +E +V+ L H LV L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 408 EA--WSLVYEYLPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ ++ EY+ NG L + L + LL + ++ + +L S ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES---KQF 141
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS-FP--YADPEYH 519
+H DL +N L++ + K+ DFG+ R V +D T+ GS FP ++ PE
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--------EETSSVGSKFPVRWSPPEVL 193
Query: 520 RTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+ KSD ++FG+++ ++ + G++P
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 VGQGGFGCVYKGEMLG-----RTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V +G + VAIK L + Q EF E ++ + +HP+++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 404 GACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G + ++ E++ NG+L F + N + IASG+ +L
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS--- 136
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH DL +NIL++S L K+ DFG+ R + E++ P++ S K + PE
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS-SDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
T SD++S+G+++ ++++
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 350 VGQGGFGCVYKGEMLGRT------VAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTL 402
+G G FG VYKG + + VAIK L + + Q ++F E ++ + H +++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 403 LGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
G + ++ EY+ NG+L L K +L + IA+G+ +L +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL--QLVGMLRGIAAGMKYLANMN-- 167
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
VH DL +NIL++S L K+ DFG+ R++ +D + + ++ K + PE
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EATYTTSGGKIPIRWTAPEAIS 223
Query: 521 TGVLTPKSDSYSFGLIILQLLT 542
T SD +SFG+++ +++T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 29/300 (9%)
Query: 272 GELKLIQASIATLQQEKQRIRRQKVEAVRWLERWRSRGQAGAANYDGFIGLV--EDLPES 329
G+ K + + L +R RR+ + + R +G ++NYD ++ + + P+
Sbjct: 89 GQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTV-SSNYDNYVFDIWKQYYPQP 147
Query: 330 AEFSLADLQTATCNFSESFKVGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQE 387
E + ++ ++G G FG V++ G A K + + + + ++E
Sbjct: 148 VEIKHDHVLD---HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE 204
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLV--YEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIA 444
++ +S L+HP LV L A + +V YE++ G L +++ + N + +D A
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN---KMSEDEAVEYM 261
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFH 502
++ GLC +H + VH DLKP+NI+ ++ S+ K+ DFG+ T +L
Sbjct: 262 RQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGL-------TAHLDPKQ 311
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSC 559
G+ +A PE + +D +S G++ LL+G P G + +R SC
Sbjct: 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 352 QGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+G FGCV+K ++L VA+K+ + Q + + EV L ++H +++ +GA S
Sbjct: 34 RGRFGCVWKAQLLNEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 412 ------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP------ 459
L+ + GSL D F K+NV + W + IA +A GL +LH P
Sbjct: 93 VDVDLWLITAFHEKGSLSD--FLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 460 -EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE- 517
I H D+K +N+LL + L++ I DFG+ L E H G+ Y PE
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKSAGDTHGQV---GTRRYMAPEV 204
Query: 518 ------YHRTGVLTPKSDSYSFGLIILQL 540
+ R L + D Y+ GL++ +L
Sbjct: 205 LEGAINFQRDAFL--RIDMYAMGLVLWEL 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 350 VGQGGFGCVYKG--EMLGRT---VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V G ++ G+ VAIK L S + Q +F E ++ + HP+++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 404 GACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G ++ ++ E++ NGSL F + N + IA+G+ +L
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 155
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH DL +NIL++S L K+ DFG+ R + +DT P++ + K + PE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT-SDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
T SD +S+G+++ ++++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 335 ADLQTATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKM-----LYSHNMQGQLEFQQE 387
AD Q N+ +G+G F V + G+ VA+K+ L S ++Q + +E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFRE 63
Query: 388 VRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
VR+ L HP++V L + LV EY G + D L + + R
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR--- 120
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
+I S + + H + IVH DLK +N+LLD++ + KI DFG T ++
Sbjct: 121 QIVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG-------NKLD 170
Query: 506 APKGSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
A G+ PYA PE + P+ D +S G+I+ L++G LP
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 26/227 (11%)
Query: 344 FSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVT 401
F ++G+G VY+ + G + A+K+L + + E+ VL +L HP+++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 402 L--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L + P SLV E + G L DR+ K S +D A +I + +LH +
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEAVAYLHENG- 168
Query: 460 EKIVHGDLKPQNILLDS---ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
IVH DLKP+N+L + + KI DFG+ ++V L G+ Y P
Sbjct: 169 --IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM-------KTVCGTPGYCAP 219
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----GLAGEVRRAVSC 559
E R P+ D +S G+I LL G P G RR ++C
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC 266
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 350 VGQGGFGCVYKG---EMLGR----TVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVT 401
+G+G FG V K + GR TVA+KML + +L + E VL ++ HPH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 402 LLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSP---------------------LLWK 438
L GAC + L+ EY GSL+ L V P L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
D A +I+ G+ +L +VH DL +NIL+ KI DFG+ R V E+
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED--- 204
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS 558
S + + + + E + T +SD +SFG+++ +++T L G +
Sbjct: 205 -SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------LGGNPYPGIP 257
Query: 559 CGKLSSILDPLAG---DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 612
+L ++L G + P + + L LQC + +RP + + K+LE++ V
Sbjct: 258 PERLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRP-VFADISKDLEKMMV 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++TLLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RD 128
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + +F G+ Y PE
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC------GTPEYLAPEVLED 182
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 349 KVGQGGFG----CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLG 404
K+G G +G C K + R + I S + + +EV VL L HP+++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 405 ACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ + LV E G L D + + + + D A I ++ SG+ +LH I
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV---DAAVIIKQVLSGVTYLH---KHNI 157
Query: 463 VHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
VH DLKP+N+LL+S+ KI DFG+ + + + G+ Y PE
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAV-------FENQKKMKERLGTAYYIAPEVL 210
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLPVG--LAGEVRRAVSCGKLS 563
R K D +S G+I+ LL G P G E+ R V GK +
Sbjct: 211 RKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 350 VGQGGFGCVYK-----GEMLGRTVAIKMLYS----HNMQGQLEFQQEVRVLSKLQHPHLV 400
+G+GG+G V++ G G+ A+K+L N + + E +L +++HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSS 457
L+ A L + EYL G L +L R+ + +D A AEI+ L LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQ- 139
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+ I++ DLKP+NI+L+ + K+ DFG+C+ D F G+ Y PE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC------GTIEYMAPE 191
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 555
D +S G ++ +LTG P GE R+
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRK 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 115/259 (44%), Gaps = 46/259 (17%)
Query: 349 KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVT 401
K+G G +G V K ++ G AIK++ ++ G L EV VL +L HP+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL--LDEVAVLKQLDHPNIMK 68
Query: 402 LLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L + + LV E G L D + + S + D A I ++ SG +LH
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAVIMKQVLSGTTYLH---K 122
Query: 460 EKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAPK-----GSF 511
IVH DLKP+N+LL+S+ KI DFG+ S H K G+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGL------------SAHFEVGGKMKERLGTA 170
Query: 512 PYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG--LAGEVRRAVSCGKLSSILDPL 569
Y PE R K D +S G+I+ LL G P G E+ + V GK S DP
Sbjct: 171 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS--FDP- 226
Query: 570 AGDWPTFV--ARRLVDLGL 586
DW A++LV L L
Sbjct: 227 -PDWTQVSDEAKQLVKLML 244
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RD 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + +F G+ Y PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC------GTPEYLAPEVLED 179
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 344 FSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLV 400
F++ ++G+G FG V+KG + VAIK++ + QQE+ VLS+ ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
G+ + L + EYL GS D L P A + EI GL +LHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKGLDYLHS-- 138
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
EK +H D+K N+LL + K+ DFG+ +T+ + +F G+ + PE
Sbjct: 139 -EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF------VGTPFWMAPEV 191
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ K+D +S G+ ++L G P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RD 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + +F G+ Y PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC------GTPEYLAPEVLED 179
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLY-SHNMQGQLEFQQEVRVLSKL-QHPHLV 400
+G G FG V + G TVA+KML S ++ + E++VLS L H ++V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRK------SNVSPLLWKDRAR---------I 443
LLGAC ++ EY G L + L RK S SP + +D
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ ++A G+ FL S + +H DL +NILL +KICDFG+ R + D+ Y+ +
Sbjct: 167 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
K + PE V T +SD +S+G+ + +L +
Sbjct: 224 RLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G+G FG V + + G RTVA+KML + E+++L + H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 TLLGACPEAWS---LVYEYLPNGSLQDRLFRKSN-VSPL--LWKDRARI------AAEIA 448
LLGAC + ++ E+ G+L L K N P L+KD + + ++A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
G+ FL S K +H DL +NILL + KI DFG+ R + +D P + R +
Sbjct: 155 KGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD----PDYVRKGDAR 207
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ PE V T +SD +SFG+++ ++ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 42/279 (15%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNV--------------------SPLLWK 438
LLGAC + + EY G L + L RK+ PL +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
D ++++A G+ FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+
Sbjct: 159 DLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS 558
+ K + PE V T +SD +S+G+++ ++ + +GL V+
Sbjct: 216 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVN 267
Query: 559 CGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP 597
+ D P F + + + C L RP
Sbjct: 268 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 306
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLY-SHNMQGQLEFQQEVRVLSKL-QHPHLV 400
+G G FG V + G TVA+KML S ++ + E++VLS L H ++V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRK------SNVSPLLWKDRAR---------I 443
LLGAC ++ EY G L + L RK S SP + +D
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ ++A G+ FL S + +H DL +NILL +KICDFG+ R + D+ Y+ +
Sbjct: 151 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
K + PE V T +SD +S+G+ + +L +
Sbjct: 208 RLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 350 VGQGGFGCVYKG------EMLGRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLV 400
+G G FG V+KG E + V IK++ + G+ FQ + + L H H+V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 401 TLLGACP-EAWSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
LLG CP + LV +YLP GSL D + + + + P L + +IA G+ +L
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG---VQIAKGMYYLEE-- 151
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+VH +L +N+LL S ++ DFG+ L+ D L T K + E
Sbjct: 152 -HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMALES 206
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
G T +SD +S+G+ + +L+T
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLY-SHNMQGQLEFQQEVRVLSKL-QHPHLV 400
+G G FG V + G TVA+KML S ++ + E++VLS L H ++V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRK------SNVSPLLWKDRAR---------I 443
LLGAC ++ EY G L + L RK S SP + +D
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ ++A G+ FL S + +H DL +NILL +KICDFG+ R + D+ Y+ +
Sbjct: 169 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
K + PE V T +SD +S+G+ + +L +
Sbjct: 226 RLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLY-SHNMQGQLEFQQEVRVLSKL-QHPHLV 400
+G G FG V + G TVA+KML S ++ + E++VLS L H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRK------SNVSPLLWKDRAR---------I 443
LLGAC ++ EY G L + L RK S SP + +D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ ++A G+ FL S + +H DL +NILL +KICDFG+ R + D+ Y+ +
Sbjct: 174 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
K + PE V T +SD +S+G+ + +L +
Sbjct: 231 RLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 350 VGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTL 402
+GQG FG V+ + G A+K+L ++ ++ + E +L+ + HP +V L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 403 LGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
A L+ ++L G L RL ++ + +D AE+A GL LHS
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALGLDHLHSLG-- 150
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+NILLD E K+ DFG+ + + SF G+ Y PE
Sbjct: 151 -IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF------CGTVEYMAPEVVN 203
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
+ +D +S+G+++ ++LTG LP
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 350 VGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLE--FQQEVRVLSKLQHPHLVTLLGA 405
VG+G +G V K + GR VAIK + ++ +E+++L +L+H +LV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 406 CPEA--WSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
C + W LV+E++ + L D LF L ++ + +I +G+ F HS I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHS---HNI 145
Query: 463 VHGDLKPQNILLDSELSSKICDFGICR 489
+H D+KP+NIL+ K+CDFG R
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSRD--- 130
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + F G+ Y PE
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC------GTPEYLAPEVLED 184
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 23/221 (10%)
Query: 349 KVGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG V++ G A K + + + + ++E++ +S L+HP LV L A
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 407 PEAWSLV--YEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSKPEKIV 463
+ +V YE++ G L +++ + N + +D A ++ GLC +H + V
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHENN---YV 171
Query: 464 HGDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
H DLKP+NI+ ++ S+ K+ DFG+ T +L G+ +A PE
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGL-------TAHLDPKQSVKVTTGTAEFAAPEVAEG 224
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSC 559
+ +D +S G++ LL+G P G + +R SC
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 265
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 350 VGQGGFGCVYKG------EMLGRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLV 400
+G G FG V+KG E + V IK++ + G+ FQ + + L H H+V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 401 TLLGACP-EAWSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
LLG CP + LV +YLP GSL D + + + + P L + +IA G+ +L
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG---VQIAKGMYYLEE-- 133
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+VH +L +N+LL S ++ DFG+ L+ D L T K + E
Sbjct: 134 -HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMALES 188
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT 542
G T +SD +S+G+ + +L+T
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + F G+ Y PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC------GTPEYLAPEVLED 179
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKMLY-SHNMQGQLEFQQEVRVLSKL-QHPHLV 400
+G G FG V + G TVA+KML S ++ + E++VLS L H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRK------SNVSPLLWKDRAR---------I 443
LLGAC ++ EY G L + L RK S SP + +D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ ++A G+ FL S + +H DL +NILL +KICDFG+ R + D+ Y+ +
Sbjct: 174 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
K + PE V T +SD +S+G+ + +L +
Sbjct: 231 RLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RD 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + F G+ Y PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC------GTPEYLAPEVLED 179
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 134
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 135 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 188
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 46/228 (20%)
Query: 350 VGQGGFGCVYKGEMLG-------RTVAIKML---YSHNMQGQLEFQQEVRVLSKLQHPHL 399
+G+G FG V++ G VA+KML S +MQ +FQ+E ++++ +P++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA--DFQREAALMAEFDNPNI 112
Query: 400 VTLLGACP--EAWSLVYEYLPNGSLQDRL----------FRKSNVS-----------PLL 436
V LLG C + L++EY+ G L + L S++S PL
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 437 WKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 496
++ IA ++A+G+ +L K VH DL +N L+ + KI DFG+ R +
Sbjct: 173 CAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR-----NI 224
Query: 497 YLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
Y ++++ + P + PE T +SD +++G+++ ++ +
Sbjct: 225 YSADYYKADG-NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 113/257 (43%), Gaps = 42/257 (16%)
Query: 349 KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLL 403
K+G G +G V K ++ G AIK++ ++ EV VL +L HP+++ L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
+ + LV E G L D + + S + D A I ++ SG +LH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAVIMKQVLSGTTYLHK---HN 141
Query: 462 IVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAPK-----GSFPY 513
IVH DLKP+N+LL+S+ KI DFG+ S H K G+ Y
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGL------------SAHFEVGGKMKERLGTAYY 189
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG--LAGEVRRAVSCGKLSSILDPLAG 571
PE R K D +S G+I+ LL G P G E+ + V GK S DP
Sbjct: 190 IAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS--FDP--P 244
Query: 572 DWPTFV--ARRLVDLGL 586
DW A++LV L L
Sbjct: 245 DWTQVSDEAKQLVKLML 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCV--YKGEMLGRTVAIKMLYSHNMQGQLEFQQEV---RVLSKLQHPHLVTLLG 404
+G+G FG V + + GR A+K+L + + E V RVL +HP L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A + V EY G L L R+ + ++RAR AEI S L +LHS
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHS---RD 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+V+ D+K +N++LD + KI DFG+C+ D + F G+ Y PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC------GTPEYLAPEVLED 179
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D + G+++ +++ GRLP
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLS 563
+T + + PE + T +SD +SFG+++ ++ T L G V +L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 262
Query: 564 SIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+L + D P+ L + C +RP LV++L+++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRI 309
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 151
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 152 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 205
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 350 VGQGGFGCVY-----KGEMLGRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTL 402
+GQG FG V+ G + A+K+L ++ ++ + E +L ++ HP +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 403 LGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
A L+ ++L G L RL ++ + +D AE+A L LHS
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHSLG-- 146
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+NILLD E K+ DFG+ + + SF G+ Y PE
Sbjct: 147 -IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEVVN 199
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
T +D +SFG+++ ++LTG LP
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNM--QGQLEFQQEVR------VLSKLQHPHLVT 401
+GQG FG V+ + + + A + LY+ + + L+ + VR +L ++ HP +V
Sbjct: 32 LGQGSFGKVFLVKKISGSDA-RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 402 LLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L A L+ ++L G L RL ++ + +D AE+A L LHS
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHSLG- 146
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
I++ DLKP+NILLD E K+ DFG+ + + SF G+ Y PE
Sbjct: 147 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF------CGTVEYMAPEVV 198
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLP 546
T +D +SFG+++ ++LTG LP
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 350 VGQGGFGCVYKGEMLGR-------TVAIKMLYSHNMQGQLE-FQQEVRVLSKL-QHPHLV 400
+G G FG V + G VA+KML S + E E++++S L QH ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 401 TLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARIAA 445
LLGAC + + EY G L + L RK + +P L +D ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S + +H D+ +N+LL + +KI DFG+ R + D+ Y+ +
Sbjct: 174 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSI 565
K + PE V T +SD +S+G+++ ++ + +GL V+ +
Sbjct: 231 PVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLV 282
Query: 566 LDPLAGDWPTFVARRLVDLGLQCCELYGRERP 597
D P F + + + C L RP
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 314
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 350 VGQGGFGCVYKG------EMLGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 402
+G G FG VYKG E + VAIK+L + + E E V++ + P++ L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 403 LGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
LG C LV + +P G L D + + N L +D +IA G+ +L +
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHV--RENRGRLGSQDLLNWCMQIAKGMSYLEDVR--- 139
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+VH DL +N+L+ S KI DFG+ RL+ D + + + K + E
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVPIKWMALESILR 195
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
T +SD +S+G+ + +L+T
Sbjct: 196 RRFTHQSDVWSYGVTVWELMT 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLS 563
+T + + PE + T +SD +SFG+++ ++ T L G V +L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 262
Query: 564 SIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+L + D P+ L + C +RP LV++L+++
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 148 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLS 563
+T + + PE + T +SD +SFG+++ ++ T L G V +L
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 254
Query: 564 SIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+L + D P+ L + C +RP LV++L+++
Sbjct: 255 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRI 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 149 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE + T +SD +SFG+++ ++ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNM--QGQLEFQQEVR------VLSKLQHPHLVT 401
+GQG FG V+ + + + A + LY+ + + L+ + VR +L ++ HP +V
Sbjct: 33 LGQGSFGKVFLVKKISGSDA-RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 402 LLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 459
L A L+ ++L G L RL ++ + +D AE+A L LHS
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHSLG- 147
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
I++ DLKP+NILLD E K+ DFG+ + + SF G+ Y PE
Sbjct: 148 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF------CGTVEYMAPEVV 199
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLP 546
T +D +SFG+++ ++LTG LP
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 145 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLS 563
+T + + PE + T +SD +SFG+++ ++ T L G V +L
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 251
Query: 564 SIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+L + D P+ L + C +RP LV++L+++
Sbjct: 252 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRI 298
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 161
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 162 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 215
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLGA 405
K+G G FG V+ E G IK + Q +E + E+ VL L HP+++ +
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 406 CPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDR-ARIAAEIASGLCFLHSSKPEKI 462
+ ++ V E G L +R+ L + A + ++ + L + HS + +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHV 145
Query: 463 VHGDLKPQNILL-DSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
VH DLKP+NIL D+ S KI DFG+ L D ST G+ Y PE
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-------EHSTNAAGTALYMAPEVF 198
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ V T K D +S G+++ LLTG LP
Sbjct: 199 KRDV-TFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 350 VGQGGFGCVYKGEMLG-----RTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V +G + VAIK L + Q EF E ++ + +HP+++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 404 GACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G + ++ E++ NG+L F + N + IASG+ +L
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS--- 138
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH DL +NIL++S L K+ DFG+ R + E++ P+ S K + PE
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS-SDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
T SD++S+G+++ ++++
Sbjct: 198 RKFTSASDAWSYGIVMWEVMS 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 347 SFKVGQGGFGCVYKGEMLGRT----VAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVT 401
++G G FG V +G R VAIK+L + E +E +++ +L +P++V
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 402 LLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
L+G C EA LV E G L L K P+ + A + +++ G+ +L +
Sbjct: 75 LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEE---K 129
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
VH DL +N+LL + +KI DFG+ + + D Y + +A K + PE
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY---YTARSAGKWPLKWYAPECIN 186
Query: 521 TGVLTPKSDSYSFGLIILQLLT 542
+ +SD +S+G+ + + L+
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALS 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 342 CNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL 399
+F E +GQG FG V K + R AIK + H + EV +L+ L H ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYV 64
Query: 400 VTLLGACPEAWSLV---------------YEYLPNGSLQDRLFRKSNVSPLLWKDRA-RI 443
V A E + V EY NG+L D L N++ +D R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQ--QRDEYWRL 121
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-------LVTEDTL 496
+I L ++HS + I+H DLKP NI +D + KI DFG+ + ++ D+
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 497 YLP-SFHRSTAPKGSFPYADPEY-HRTGVLTPKSDSYSFGLIILQLL----TGRLPVGLA 550
LP S T+ G+ Y E TG K D YS G+I +++ TG V +
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
Query: 551 GEVR 554
++R
Sbjct: 239 KKLR 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V EY+ NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 35/220 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRL-----------FRKSNVSP---LLWKDRAR 442
++ LLGAC + L + EY G+L++ L + S+ +P L KD
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH-NPEEQLSSKDLVS 139
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ +
Sbjct: 140 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 192
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
++T + + PE + T +SD +SFG+++ ++ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS------NVSP-------LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + + +P L KD
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ + +
Sbjct: 197 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLS 563
+T + + PE + T +SD +SFG+++ ++ T L G V +L
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 303
Query: 564 SIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 610
+L + D P+ L + C +RP LV++L+++
Sbjct: 304 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRI 350
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRL-----------FRKSNVSP---LLWKDRAR 442
++ LLGAC + L + EY G+L++ L F S+ +P L KD
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH-NPEEQLSSKDLVS 154
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++
Sbjct: 155 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXK 207
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
++T + + PE + T +SD +SFG+++ ++ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 82
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 139
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
+ KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 140 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 189
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG 548
PE + + +SD +S GL ++++ GR P+G
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 146
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ A G+ Y
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANAFVGTAQYV 199
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 209 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 261
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ +I DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 350 VGQGGFGCVYKG--EMLGRT---VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V G ++ G+ VAIK L S + Q +F E ++ + HP+++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 404 GACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G ++ ++ E++ NGSL F + N + IA+G+ +L
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 129
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH L +NIL++S L K+ DFG+ R + +DT P++ + K + PE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT-SDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
T SD +S+G+++ ++++
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKN 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 35/220 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G VA+KML S + L + E+ ++ + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRL-----------FRKSNVSP---LLWKDRAR 442
++ LLGAC + L + EY G+L++ L + S+ +P L KD
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH-NPEEQLSSKDLVS 154
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 502
A ++A G+ +L S +K +H DL +N+L+ + KI DFG+ R D ++ +
Sbjct: 155 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
++T + + PE + T +SD +SFG+++ ++ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 155 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 207
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 150 TYQLARGMEYLAS---QKCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKK 202
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 34/237 (14%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L ++ Q +L+
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 495 TLYLPSFHR----STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R + P P PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMP---PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 81 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 137
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 191
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 147
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 201
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 147
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 201
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 152 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 204
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SKL H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 193 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 71 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 127
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 181
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + EY G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 89 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 145
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 199
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 131
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 185
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 69 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 125
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGR---TVAIKML-YSHNMQG 380
P A A A+C E +G G FG V G ++ G+ VAIK L + +
Sbjct: 29 PNRAVHQFAKELDASCIKIERV-IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ 87
Query: 381 QLEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSN----VSP 434
+ +F E ++ + HP++V L G +V E++ NG+L D RK + V
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQ 146
Query: 435 LLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 494
L+ R IA+G+ +L VH DL +NIL++S L K+ DFG+ R++ +D
Sbjct: 147 LVGMLRG-----IAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 495 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + +T K + PE + T SD +S+G+++ ++++
Sbjct: 199 P---EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SKL H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 207 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 574
PE SD ++ G II QL+ G P RA + G + + + L D+P
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF-------RAGNEGLIFAKIIKLEYDFP 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ + G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANSFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE + SD ++ G II QL+ G P E
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 574
PE SD ++ G II QL+ G P RA + G + + + L D+P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-------RAGNEGLIFAKIIKLEYDFP 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + Y G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 123
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 124 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 176
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 149
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ + G+ Y
Sbjct: 150 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANSFVGTAQYV 202
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 145
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ + G+ Y
Sbjct: 146 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANSFVGTAQYV 198
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 30/274 (10%)
Query: 349 KVGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQL--EFQQEVRVLSKLQHPHLVTLLG 404
K+G+G FG + K GR IK + M + E ++EV VL+ ++HP++V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 405 ACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSKPEK 461
+ E SL V +Y G L R+ + V L +D+ +I L +H K
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGV--LFQEDQILDWFVQICLALKHVHD---RK 145
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H D+K QNI L + + ++ DFGI R++ + + A G+ Y PE
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS------TVELARACIGTPYYLSPEICEN 199
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSS-ILDPLAGDWPTFVARR 580
KSD ++ G ++ +L T ++ A G + + +L ++G +P
Sbjct: 200 KPYNNKSDIWALGCVLYELCT----------LKHAFEAGSMKNLVLKIISGSFPPVSLHY 249
Query: 581 LVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 614
DL +L+ R P PS+ LE+ +A+
Sbjct: 250 SYDLRSLVSQLFKRN-PRDRPSVNSILEKGFIAK 282
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 182
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 183 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 124
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 125 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 177
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 125
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 126 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 178
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 214
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 34/237 (14%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 167 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 218
Query: 495 TLYLPSFHR----STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R + P P PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 219 DIYRASYYRKGGCAMLPVKWMP---PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 90
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 147
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 148 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 197
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 146
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 199
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 182
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 183 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 234
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 140
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 141 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 191
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 192 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 243
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 192 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 126
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 127 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 179
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 183
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 184 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 146
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 199
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 185
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 186 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 237
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 130
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 131 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 183
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V E + NGSL D RK + + + + IASG+ +L
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 134
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 135 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 188
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 184
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 185 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGR---TVAIKML-YSHNMQG 380
P A A A+C E +G G FG V G ++ G+ VAIK L + +
Sbjct: 8 PNQAVHEFAKEIEASCITIERV-IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ 66
Query: 381 QLEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
+ +F E ++ + HP+++ L G ++ +V EY+ NGSL F K N
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT--FLKKNDGQFTVI 124
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
+ I++G+ +L VH DL +NIL++S L K+ DFG+ R++ +D
Sbjct: 125 QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--- 178
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + + K + PE T SD +S+G+++ ++++
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 184
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 185 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 236
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 136
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 137 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 187
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 188 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 193 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 192 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 149
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 150 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 202
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 350 VGQGGFGCVYKGEMLG---------RTVAIKMLYSHNMQGQL-EFQQEVRVLSKL-QHPH 398
+G+G FG V E +G TVA+KML + L + E+ ++ + +H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVTLLGACPEAWSL--VYEYLPNGSLQDRLFRKS----------NVSP---LLWKDRARI 443
++ LLGAC + L + Y G+L++ L + N P + +KD
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
++A G+ +L S +K +H DL +N+L+ KI DFG+ R D + + +
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+T + + PE V T +SD +SFG+++ ++ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 433 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 489
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 543
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 188
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 189 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 157 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 208
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 209 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 183
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 184 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 235
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 124
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 175
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 176 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 148
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 201
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V E + NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 155
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 156 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 206
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 207 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 145
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 146 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 198
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
PE SD ++ G II QL+ G LP AG
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAG 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 184
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 185 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 236
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 184
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 185 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 236
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 207 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 125
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 182
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 183 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 232
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 404 GACPE--AWSLVYEYLPNGSL----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G E W ++ E G L Q R F S +L+ A ++++ L +L S
Sbjct: 458 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILY------AYQLSTALAYLES- 509
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YAD 515
++ VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P +
Sbjct: 510 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMA 560
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLL 541
PE T SD + FG+ + ++L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 434 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 490
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D Y + T K + PE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY---YKAQTHGKWPVKWYAPEC 544
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGM 127
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 128 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 178
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 179 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 230
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 34/237 (14%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 147 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 198
Query: 495 TLYLPSFHR----STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R + P P PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 199 DIYRASYYRKGGCAMLPVKWMP---PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 153
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 154 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 206
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 337 LQTATCN-FSESFKVGQGGFGCVYK--GEMLGRTVAIKMLYSH-NMQGQLEFQQEVRVLS 392
L T TC + ++G GGFG V + + G VAIK + + + + E++++
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 393 KLQHPHLVT-------LLGACPEAWSLV-YEYLPNGSLQDRLFRKSNVSPLLWKDRARIA 444
KL HP++V+ L P L+ EY G L+ L + N L +
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLD---SELSSKICDFGICRLVTEDTLYLPSF 501
++I+S L +LH ++ I+H DLKP+NI+L L KI D G + + + L
Sbjct: 128 SDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL----- 179
Query: 502 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
T G+ Y PE T D +SFG + + +TG P
Sbjct: 180 --CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 343 NFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHP 397
+F+ +G+G FG V E G A+K+L + + + E RVL+ P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 398 HLVTLLGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+T L +C + +Y EY+ G L ++ V AAEIA GL FL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
S + I++ DLK N++LDSE KI DFG+C+ D + F G+ Y
Sbjct: 459 QS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYI 509
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE D ++FG+++ ++L G+ P
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 343 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQH 396
N S VG G FG V G + +VAIK L + + + +F E ++ + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 397 PHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P+++ L G ++ +V E + NGSL D RK + + + + IASG+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRG-IASGMKYL 163
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
VH DL +NIL++S L K+ DFG+ R++ +D + + + K +
Sbjct: 164 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP---EAAYTTRGGKIPIRWT 217
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLT 542
PE T SD +S+G+++ ++++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 132 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 183
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 184 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F V L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 151
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 152 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 204
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE SD ++ G II QL+ G P
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 337 LQTATCN-FSESFKVGQGGFGCVYK--GEMLGRTVAIKMLYSH-NMQGQLEFQQEVRVLS 392
L T TC + ++G GGFG V + + G VAIK + + + + E++++
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 393 KLQHPHLVT-------LLGACPEAWSLV-YEYLPNGSLQDRLFRKSNVSPLLWKDRARIA 444
KL HP++V+ L P L+ EY G L+ L + N L +
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 128
Query: 445 AEIASGLCFLHSSKPEKIVHGDLKPQNILLD---SELSSKICDFGICRLVTEDTLYLPSF 501
++I+S L +LH ++ I+H DLKP+NI+L L KI D G + + + L
Sbjct: 129 SDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL----- 180
Query: 502 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
T G+ Y PE T D +SFG + + +TG P
Sbjct: 181 --CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 46/231 (19%)
Query: 343 NFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+F E +G GGFG V+K + + G+T I+ + +N + + +EV+ L+KL H ++V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 401 TLLGAC------PEAWSLVYE---YLPNGS------------LQDRLFRKSNVSPLLWKD 439
G PE E Y P S +Q K + + K
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 440 RAR---------IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 490
R + +I G+ ++HS +K++H DLKP NI L KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 491 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
+ D + T KG+ Y PE + + D Y+ GLI+ +LL
Sbjct: 186 LKNDG-------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 342 CNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL 399
+F E +GQG FG V K + R AIK + H + EV +L+ L H ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYV 64
Query: 400 VTLLGACPEAWSLV---------------YEYLPNGSLQDRLFRKSNVSPLLWKDRA-RI 443
V A E + V EY N +L D L N++ +D R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQ--QRDEYWRL 121
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-------LVTEDTL 496
+I L ++HS + I+H DLKP NI +D + KI DFG+ + ++ D+
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 497 YLP-SFHRSTAPKGSFPYADPEY-HRTGVLTPKSDSYSFGLIILQLL----TGRLPVGLA 550
LP S T+ G+ Y E TG K D YS G+I +++ TG V +
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
Query: 551 GEVR 554
++R
Sbjct: 239 KKLR 242
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 352 QGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK--LQHPHLVTLLGACP-- 407
+G FGCV+K +++ VA+K+ +Q + +Q E + S ++H +L+ + A
Sbjct: 25 RGRFGCVWKAQLMNDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 408 -----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP--- 459
E W L+ + GSL D L K N+ + W + +A ++ GL +LH P
Sbjct: 82 SNLEVELW-LITAFHDKGSLTDYL--KGNI--ITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 460 -----EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
I H D K +N+LL S+L++ + DFG+ V + P + G+ Y
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA--VRFEPGKPPG--DTHGQVGTRRYM 192
Query: 515 DPE-------YHRTGVLTPKSDSYSFGLIILQLLT 542
PE + R L + D Y+ GL++ +L++
Sbjct: 193 APEVLEGAINFQRDAFL--RIDMYAMGLVLWELVS 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 343 NFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHP 397
+F+ +G+G FG V + G AIK+L + + + E RVL+ L P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 398 HLVTLLGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+T L +C + +Y EY+ G L ++ V AAEI+ GL FL
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H I++ DLK N++LDSE KI DFG+C+ D + F G+ Y
Sbjct: 137 HK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC------GTPDYI 187
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE D +++G+++ ++L G+ P
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 43/223 (19%)
Query: 343 NFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+F E +G GGFG V+K + + G+T IK + +N + + +EV+ L+KL H ++V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 401 TLLGACPEAWSLVYEYLPNGS-------------LQDRLFRKSNVSPLLWKDRAR----- 442
G C + ++Y P S +Q K + + K R
Sbjct: 68 HYNG-CWDG----FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 443 ----IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
+ +I G+ ++HS +K+++ DLKP NI L KI DFG+ + D
Sbjct: 123 LALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--- 176
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
+ KG+ Y PE + + D Y+ GLI+ +LL
Sbjct: 177 ----KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS 456
+V LL LV+E+L + L+D S ++ + ++ GL F HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 125 ---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GR---TVAIKMLYSHNMQGQ 381
P A A A+C E +G G FG V G + G+ VAIK L + Q
Sbjct: 15 PNQAVREFAKEIDASCIKIEKV-IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 382 L-EFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSN----VSP 434
+F E ++ + HP+++ L G + ++ EY+ NGSL D RK++ V
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQ 132
Query: 435 LLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 494
L+ R I SG+ +L VH DL +NIL++S L K+ DFG+ R++ +D
Sbjct: 133 LVGMLRG-----IGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 495 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + + K + PE T SD +S+G+++ ++++
Sbjct: 185 P---EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 63
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 170
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 63
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 170
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 63
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 170
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS 456
+V LL LV+E+L + L+D S ++ + ++ GL F HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 124 ---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 63
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 170
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 348 FKVGQGGFGCVYKGEMLGRT----VAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTL 402
++G G FG V +G R VAIK+L + E +E +++ +L +P++V L
Sbjct: 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 403 LGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
+G C EA LV E G L L K P+ + A + +++ G+ +L +
Sbjct: 402 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEE---KN 456
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH +L +N+LL + +KI DFG+ + + D Y + +A K + PE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY---YTARSAGKWPLKWYAPECINF 513
Query: 522 GVLTPKSDSYSFGLIILQLLT 542
+ +SD +S+G+ + + L+
Sbjct: 514 RKFSSRSDVWSYGVTMWEALS 534
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 63
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 170
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL ++++ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 346 ESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQHPHL 399
E ++G G FG V KG +M + + N + E E V+ +L +P++
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 400 VTLLGAC-PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
V ++G C E+W LV E G L L + +V K+ + +++ G+ +L S
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 131
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
VH DL +N+LL ++ +KI DFG+ + + D + T K + PE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE---NXYKAQTHGKWPVKWYAPEC 185
Query: 519 HRTGVLTPKSDSYSFGLIILQLLT-GRLPV-GLAG 551
+ KSD +SFG+++ + + G+ P G+ G
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 350 VGQGGFGCVYKGEML--GR---TVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V G + G+ VAIK L + Q +F E ++ + HP+++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSN----VSPLLWKDRARIAAEIASGLCFLHSS 457
G + ++ EY+ NGSL D RK++ V L+ R I SG+ +L
Sbjct: 82 GVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRG-----IGSGMKYLSDM 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
VH DL +NIL++S L K+ DFG+ R++ +D + + + K + PE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP---EAAYTTRGGKIPIRWTAPE 189
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
T SD +S+G+++ ++++
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 343 NFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHP 397
+F+ +G+G FG V E G A+K+L + + + E RVL+ P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 398 HLVTLLGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+T L +C + +Y EY+ G L ++ V AAEIA GL FL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
S + I++ DLK N++LDSE KI DFG+C+ D + F G+ Y
Sbjct: 138 QS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYI 188
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE D ++FG+++ ++L G+ P
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRVLSK-------LQHPHL 399
+G+G FG V +L R A ++ Y+ + + L+ ++E ++S+ ++HP L
Sbjct: 46 IGKGSFGKV----LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 400 VTLLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHS 456
V L + A L V +Y+ G L L R+ + RAR AAEIAS L +LHS
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHS 157
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYA 514
IV+ DLKP+NILLDS+ + DFG+C+ E H ST G+ Y
Sbjct: 158 LN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE--------HNSTTSTFCGTPEYL 206
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE D + G ++ ++L G P
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 158 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 209
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y ++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 210 DIYRAGYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 183
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 184 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 346 ESFK----VGQGGFGCVYKGEMLG--RTVAIKMLYSHNM--QGQLEF-QQEVRVLSKLQH 396
E FK +G+G F L R AIK+L ++ + ++ + +E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 397 PHLVTLLGACPEAWSLVY--EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P V L + L + Y NG L + + + + AEI S L +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR---FYTAEIVSALEYL 146
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
H + I+H DLKP+NILL+ ++ +I DFG ++++ ++ R+ G+ Y
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANXFVGTAQYV 199
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
PE SD ++ G II QL+ G P E
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 343 NFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHP 397
+F +G+G FG VY + + VA+K+L+ ++ + + ++E+ + + L HP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 398 HLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 455
+++ L + L+ EY P G L L + + A I E+A L + H
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALMYCH 140
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
+K++H D+KP+N+LL + KI DFG +++ PS R T G+ Y
Sbjct: 141 G---KKVIHRDIKPENLLLGLKGELKIADFGW-------SVHAPSLRRKTM-CGTLDYLP 189
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE + K D + G++ +LL G P
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 350 VGQGGFGCVYKGEML--GR---TVAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLL 403
+G G FG V G + G+ VAIK L + Q +F E ++ + HP+++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSN----VSPLLWKDRARIAAEIASGLCFLHSS 457
G + ++ EY+ NGSL D RK++ V L+ R I SG+ +L
Sbjct: 76 GVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRG-----IGSGMKYLSDM 129
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
VH DL +NIL++S L K+ DFG+ R++ +D + + + K + PE
Sbjct: 130 S---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP---EAAYTTRGGKIPIRWTAPE 183
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLT 542
T SD +S+G+++ ++++
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 404 GACPE--AWSLVYEYLPNGSL----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G E W ++ E G L Q R F S +L+ A ++++ L +L S
Sbjct: 458 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILY------AYQLSTALAYLES- 509
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YAD 515
++ VH D+ +N+L+ + K+ DFG+ R + + T Y A KG P +
Sbjct: 510 --KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMA 560
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLL 541
PE T SD + FG+ + ++L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 183
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 184 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F + ++G G G V+K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 66
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +K+ P + IA + GL +L
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIA--VIKGLTYL 123
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
KI+H D+KP NIL++S K+CDFG+ + ++ + G+ Y
Sbjct: 124 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM--------ANEFVGTRSYM 173
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE + + +SD +S GL ++++ GR P
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ R
Sbjct: 181 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 232
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y ++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 233 DIYRAGYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 185
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 186 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS 456
+V LL LV+E+L + L+D S ++ + ++ GL F HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+++H DLKP+N+L+++E + K+ DFG+ R
Sbjct: 122 ---HRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 333 SLADL-QTATCNFSESFKVGQGGFGCVYKGEMLGRT-------VAIKMLYS-HNMQGQLE 383
S++DL + N + +G G FG VY+G++ G VA+K L + Q +L+
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLF----RKSNVSPLLW 437
F E ++SK H ++V +G ++ ++ E + G L+ L R S S L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRLVTED 494
D +A +IA G +L + +H D+ +N LL +KI DFG+ +
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----- 192
Query: 495 TLYLPSFHRSTAPKGSFP--YADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLP 546
+Y S++R P + PE G+ T K+D++SFG+++ ++ + G +P
Sbjct: 193 DIYRASYYRKGG-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 183
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 184 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 235
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS 456
+V LL LV+E+L + L+ + S ++ + ++ GL F HS
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 126 ---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 127 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 343 NFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHP 397
NF +G+G FG V + G A+K+L + + + E R+LS ++
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 398 HLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCF 453
+T L C P+ V E++ G L + + + RAR AAEI S L F
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----EARARFYAAEIISALMF 139
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
LH + I++ DLK N+LLD E K+ DFG+C+ + + +F G+ Y
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF------CGTPDY 190
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE + + P D ++ G+++ ++L G P
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 121 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 78 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 184
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 80 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 133
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 186
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 187 NFRRFTSASDVWMFGVCMWEIL 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 404 GACPE--AWSLVYEYLPNGSL----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G E W ++ E G L Q R F S +L+ A ++++ L +L S
Sbjct: 78 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILY------AYQLSTALAYLES- 129
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YAD 515
++ VH D+ +N+L+ + K+ DFG+ R + + T Y A KG P +
Sbjct: 130 --KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMA 180
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLL 541
PE T SD + FG+ + ++L
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 121 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 337 LQTATCNFSESFKV----GQGGFG----CVYKG---EMLGRTVAIKMLYSHNMQGQLEFQ 385
+ A+ FS+++ V G+G F CV+K E + + K L + + Q + +
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLE 76
Query: 386 QEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI 443
+E R+ KLQHP++V L + E LV++ + G L + + + S D +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHC 133
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPS 500
+I + + HS+ IVH +LKP+N+LL S+ + K+ DFG+ V + +
Sbjct: 134 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----A 186
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+H G Y PE + + D ++ G+I+ LL G P
Sbjct: 187 WHGFAGTPG---YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG +L+ + +H A G
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE---KEYH---AEGGKV 188
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 189 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 240
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 127 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 121 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + +G G FG VYKG E + VAI L + + + E E V++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 164
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 165 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 215
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 216 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 267
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 81 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 134
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 187
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 188 NFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 75 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 128
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 181
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 124 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 331 EFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQ 386
E L+ L+ F VG G +G VYKG + G+ AIK++ ++ G + E +Q
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGDEEEEIKQ 69
Query: 387 EVRVLSKL-QHPHLVTLLGAC---------PEAWSLVYEYLPNGSLQDRLFRKSNVSPLL 436
E+ +L K H ++ T GA + W LV E+ GS+ D L + + + L
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW-LVMEFCGAGSVTD-LIKNTKGNTLK 127
Query: 437 WKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 496
+ A I EI GL LH K++H D+K QN+LL K+ DFG+
Sbjct: 128 EEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS-------- 176
Query: 497 YLPSFHRSTAPKGSF---PY-ADPEY-----HRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
R+ + +F PY PE + KSD +S G+ +++ G P+
Sbjct: 177 --AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 78 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 184
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 83 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 136
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 189
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 190 NFRRFTSASDVWMFGVCMWEIL 211
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 340 ATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ 395
AT + ++G G +G VYK G VA+K + N + L +EV +L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HPHLVTLLGACPEA-------WSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRAR-I 443
HP++V L+ C + +LV+E++ QD R + P L + + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ GL FLH++ IVH DLKP+NIL+ S + K+ DFG+ R+ S+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--------SYQM 166
Query: 504 STAP-KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG-- 560
+ AP + Y PE D +S G I ++ R+ + CG
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-----------RKPLFCGNS 215
Query: 561 ---KLSSILD----PLAGDWPTFVA 578
+L I D P DWP V+
Sbjct: 216 EADQLGKIFDLIGLPPEDDWPRDVS 240
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + + G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 188
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 189 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 240
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E G L R F + L A ++++ L +L S ++
Sbjct: 106 GVITENPVW-IIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 159
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YADPEYH 519
VH D+ +N+L+ S K+ DFG+ R + + T Y A KG P + PE
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 212
Query: 520 RTGVLTPKSDSYSFGLIILQLL 541
T SD + FG+ + ++L
Sbjct: 213 NFRRFTSASDVWMFGVCMWEIL 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L + D PL+ ++ GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLI----KSYLFQLLQGLAFC 122
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 37/250 (14%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQ---QEVRVLSKLQHPHLVTLLG 404
+G+G FG C+ + + A+K + + E + +E++++ L+HP LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 405 AC--PEAWSLVYEYLPNGSLQDRL-----FRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
+ E +V + L G L+ L F++ V + E+ L +L +
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI--------CELVMALDYLQN- 133
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++I+H D+KP NILLD I DF I ++ +T + T G+ PY PE
Sbjct: 134 --QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-------QITTMAGTKPYMAPE 184
Query: 518 YH--RTGV-LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 574
R G + D +S G+ +LL GR P +R + S ++ + +P
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY----HIRSSTSSKEIVHTFETTVVTYP 240
Query: 575 TFVARRLVDL 584
+ ++ +V L
Sbjct: 241 SAWSQEMVSL 250
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + + G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 181
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 182 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAI-KMLYSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+ K+ +G +E+ +L +L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 120 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAI-KMLYSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+ K+ +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 341 TCNFSESF----KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL 394
T N ++F +G G F V+ K + G+ A+K + + E+ VL K+
Sbjct: 4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 395 QHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
+H ++VTL + + LV + + G L DR+ + + KD + + ++ S +
Sbjct: 64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE---KDASLVIQQVLSAVK 120
Query: 453 FLHSSKPEKIVHGDLKPQNIL-LDSELSSK--ICDFGICRLVTEDTLYLPSFHRSTAPKG 509
+LH + IVH DLKP+N+L L E +SK I DFG+ ++ + STA G
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-------STAC-G 169
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ Y PE + D +S G+I LL G P
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
K+G+G +G VYK + G+ VAIK + ++Q E +E+ ++ + PH+V G+
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGS 92
Query: 406 C---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ W +V EY GS+ D + R N + L + A I GL +LH +
Sbjct: 93 YFKNTDLW-IVMEYCGAGSVSD-IIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRK--- 146
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H D+K NILL++E +K+ DFG+ +T+ + G+ + PE +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTD------XMAKRNXVIGTPFWMAPEVIQEI 200
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
+D +S G+ +++ G+ P
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 344 FSESFKVGQGGFGCVYKG------EMLGRTVAIKMLY-SHNMQGQLEFQQEVRVLSKLQH 396
F + + G FG VYKG E + VAIK L + + + E E V++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 397 PHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF-RKSNVSP---LLWKDRARIAAEIASGL 451
PH+ LLG C L+ + +P G L D + K N+ L W +IA G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 511
+L ++VH DL +N+L+ + KI DFG+ +L+ + +H A G
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYH---AEGGKV 188
Query: 512 PYA----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD 567
P + HR + T +SD +S+G+ + +L+T + + ++SSIL+
Sbjct: 189 PIKWMALESILHR--IYTHQSDVWSYGVTVWELMT------FGSKPYDGIPASEISSILE 240
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 350 VGQGGFGCVYKGEMLGR-----TVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTLL 403
+G+G FG VY+G VA+K + + +F E ++ L HPH+V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E P G L L R N +L + +I + +L S
Sbjct: 76 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESIN--- 129
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH D+ +NIL+ S K+ DFG+ R + ++ +++++ + + PE
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-----DYYKASVTRLPIKWMSPESINF 184
Query: 522 GVLTPKSDSYSFGLIILQLLT-GRLP 546
T SD + F + + ++L+ G+ P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 368 VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQD 424
VAIK L + + Q +F E ++ + HP+++ L G +V EY+ NGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 425 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 484
F +++ + + +G+ +L VH DL +N+L+DS L K+ D
Sbjct: 140 --FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSD 194
Query: 485 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
FG+ R++ +D + + +T K + PE + SD +SFG+++ ++L
Sbjct: 195 FGLSRVLEDDP---DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 350 VGQGGFGCVYKGEMLGR-----TVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTLL 403
+G+G FG VY+G VA+K + + +F E ++ L HPH+V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E P G L L R N +L + +I + +L S
Sbjct: 92 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESIN--- 145
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH D+ +NIL+ S K+ DFG+ R + ++ +++++ + + PE
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-----DYYKASVTRLPIKWMSPESINF 200
Query: 522 GVLTPKSDSYSFGLIILQLLT-GRLP 546
T SD + F + + ++L+ G+ P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 350 VGQGGFGCVYKGEMLGR-----TVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTLL 403
+G+G FG VY+G VA+K + + +F E ++ L HPH+V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 404 GACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E W ++ E P G L L R N +L + +I + +L S
Sbjct: 80 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLESIN--- 133
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
VH D+ +NIL+ S K+ DFG+ R + ++ +++++ + + PE
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-----DYYKASVTRLPIKWMSPESINF 188
Query: 522 GVLTPKSDSYSFGLIILQLLT-GRLP 546
T SD + F + + ++L+ G+ P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 50/260 (19%)
Query: 340 ATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ 395
AT + ++G G +G VYK G VA+K + N + L +EV +L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HPHLVTLLGACPEA-------WSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRAR-I 443
HP++V L+ C + +LV+E++ QD R + P L + + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ GL FLH++ IVH DLKP+NIL+ S + K+ DFG+ R+ + P
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV-- 172
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG--- 560
+ Y PE D +S G I ++ R+ + CG
Sbjct: 173 -----VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-----------RKPLFCGNSE 216
Query: 561 --KLSSILD----PLAGDWP 574
+L I D P DWP
Sbjct: 217 ADQLGKIFDLIGLPPEDDWP 236
>pdb|1T1H|A Chain A, Nmr Solution Structure Of The U Box Domain From Atpub14,
An Armadillo Repeat Containing Protein From Arabidopsis
Thaliana
Length = 78
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 619 PSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALR 678
P +F CPI E+M DP + + G TYE +I+ WL+ G +T P + L H LTPN+ L+
Sbjct: 6 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 65
Query: 679 HAIQDWLCKS 688
I W C+S
Sbjct: 66 SLIALW-CES 74
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVS-----PLLWKDRARIAAEIASGL 451
+V LL LV+E+L S+ + F ++ PL+ ++ GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLI----KSYLFQLLQGL 119
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
F HS +++H DLKP+N+L+++E + K+ DFG+ R
Sbjct: 120 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 349 KVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ---HPHLV 400
++G+G +G V+K L GR VA+K + + + +EV VL L+ HP++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 401 TLLGACPEA-------WSLVYEYLPNGSLQDRLFR--KSNVSPLLWKDRARIAAEIASGL 451
L C + +LV+E++ + L L + + V KD + ++ GL
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGL 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS-TAPKGS 510
FLHS ++VH DLKPQNIL+ S K+ DFG+ R+ SF + T+ +
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY--------SFQMALTSVVVT 182
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD--- 567
Y PE D +S G I ++ R P+ R + +L ILD
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL-----FRGSSDVDQLGKILDVIG 236
Query: 568 -PLAGDWPTFVA 578
P DWP VA
Sbjct: 237 LPGEEDWPRDVA 248
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTL--LG 404
+G G F V E + VAIK + ++G + + E+ VL K++HP++V L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
L+ + + G L DR+ K + +D +R+ ++ + +LH IVH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 465 GDLKPQNIL---LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
DLKP+N+L LD + I DFG+ ++ ED P STA G+ Y PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--ED----PGSVLSTAC-GTPGYVAPEVLAQ 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+I LL G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVS-----PLLWKDRARIAAEIASGL 451
+V LL LV+E+L S+ + F ++ PL+ ++ GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLI----KSYLFQLLQGL 117
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
F HS +++H DLKP+N+L+++E + K+ DFG+ R
Sbjct: 118 AFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTL--LG 404
+G G F V E + VAIK + ++G + + E+ VL K++HP++V L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
L+ + + G L DR+ K + +D +R+ ++ + +LH IVH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 465 GDLKPQNIL---LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
DLKP+N+L LD + I DFG+ ++ ED P STA G+ Y PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--ED----PGSVLSTAC-GTPGYVAPEVLAQ 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+I LL G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 342 CNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL 399
+F E +GQG FG V K + R AIK + H + EV +L+ L H ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYV 64
Query: 400 VTLLGACPEAWSLV---------------YEYLPNGSLQDRLFRKSNVSPLLWKDRA-RI 443
V A E + V EY N +L D L N++ +D R+
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQ--QRDEYWRL 121
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-------LVTEDTL 496
+I L ++HS + I+H +LKP NI +D + KI DFG+ + ++ D+
Sbjct: 122 FRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 497 YLP-SFHRSTAPKGSFPYADPEY-HRTGVLTPKSDSYSFGLIILQLL----TGRLPVGLA 550
LP S T+ G+ Y E TG K D YS G+I + + TG V +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNIL 238
Query: 551 GEVR 554
++R
Sbjct: 239 KKLR 242
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 349 KVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ---HPHLV 400
++G+G +G V+K L GR VA+K + + + +EV VL L+ HP++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 401 TLLGACPEA-------WSLVYEYLPNGSLQDRLFR--KSNVSPLLWKDRARIAAEIASGL 451
L C + +LV+E++ + L L + + V KD + ++ GL
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGL 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS-TAPKGS 510
FLHS ++VH DLKPQNIL+ S K+ DFG+ R+ SF + T+ +
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY--------SFQMALTSVVVT 182
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD--- 567
Y PE D +S G I ++ R P+ R + +L ILD
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL-----FRGSSDVDQLGKILDVIG 236
Query: 568 -PLAGDWPTFVA 578
P DWP VA
Sbjct: 237 LPGEEDWPRDVA 248
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKP+N+L+++E + K+ DFG+ R
Sbjct: 122 HS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E+L QD + S ++ + ++ GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKP+N+L+++E + K+ DFG+ R
Sbjct: 121 HS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 319 FIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM 378
F +VED E E + + F+ K Q G G Y + + + ++ S
Sbjct: 20 FQSMVEDHYEMGE------ELGSGQFAIVRKCRQKGTGKEYAAKFIKKR---RLXSSRRG 70
Query: 379 QGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLL 436
+ E ++EV +L +++HP+++TL L+ E + G L D L K +++
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-- 128
Query: 437 WKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVT 492
+ + +I G+ +LHS ++I H DLKP+NI LLD + + K+ DFGI +
Sbjct: 129 -DEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 493 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 185 AGNEFKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 399 LVTLLGAC--PEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E++ QD + S ++ + ++ GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVD----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 350 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTLL 403
+G+G FG V++G E VAIK + E F QE + + HPH+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 404 GACPE--AWSLVYEYLPNGSL----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
G E W ++ E G L Q R F S +L+ A ++++ L +L S
Sbjct: 78 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILY------AYQLSTALAYLES- 129
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP--YAD 515
++ VH D+ +N+L+ S K+ DFG+ R + + T A KG P +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST-------XXKASKGKLPIKWMA 180
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLL 541
PE T SD + FG+ + ++L
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHN--MQGQLEFQQ-EVRVLS-KLQHPHLVTLL 403
+G+G FG V+ E + AIK L M +E E RVLS +HP L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 404 GA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
E V EYL G L ++ + AAEI GL FLHS +
Sbjct: 86 CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KG 139
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
IV+ DLK NILLD + KI DFG+C+ E+ L ++ G+ Y PE
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCK---ENML---GDAKTNEFCGTPDYIAPEILLG 193
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLPV 547
D +SFG+++ ++L G+ P
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHN--MQGQLEFQQ-EVRVLS-KLQHPHLVTLL 403
+G+G FG V+ E + AIK L M +E E RVLS +HP L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 404 GA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
E V EYL G L ++ + AAEI GL FLHS +
Sbjct: 85 CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KG 138
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
IV+ DLK NILLD + KI DFG+C+ E+ L ++ G+ Y PE
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK---ENML---GDAKTNXFCGTPDYIAPEILLG 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D +SFG+++ ++L G+ P
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 28/214 (13%)
Query: 349 KVGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG V++ + GR K + + + + E+ ++++L HP L+ L A
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 407 PEAWS--LVYEYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
+ + L+ E+L G L DR+ ++ S + + +A GL +H
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA------CEGLKHMHE---H 168
Query: 461 KIVHGDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
IVH D+KP+NI+ +++ +S KI DFG+ + D + + T F A PE
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-----KVTTATAEF--AAPEI 221
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
+ +D ++ G++ LL+G P AGE
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSP--FAGE 253
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 349 KVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ---HPHLV 400
++G+G +G V+K L GR VA+K + + + +EV VL L+ HP++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 401 TLLGACPEA-------WSLVYEYLPNGSLQDRLFR--KSNVSPLLWKDRARIAAEIASGL 451
L C + +LV+E++ + L L + + V KD + ++ GL
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGL 133
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS-TAPKGS 510
FLHS ++VH DLKPQNIL+ S K+ DFG+ R+ SF + T+ +
Sbjct: 134 DFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY--------SFQMALTSVVVT 182
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILD--- 567
Y PE D +S G I ++ R P+ R + +L ILD
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL-----FRGSSDVDQLGKILDVIG 236
Query: 568 -PLAGDWPTFVA 578
P DWP VA
Sbjct: 237 LPGEEDWPRDVA 248
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 368 VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQD 424
VAIK L + + Q +F E ++ + HP+++ L G +V EY+ NGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 425 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 484
F +++ + + +G+ +L VH DL +N+L+DS L K+ D
Sbjct: 140 --FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSD 194
Query: 485 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
FG+ R++ +D + +T K + PE + SD +SFG+++ ++L
Sbjct: 195 FGLSRVLEDDP---DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTL--LG 404
+G G F V E + VAIK + ++G + + E+ VL K++HP++V L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
L+ + + G L DR+ K + +D +R+ ++ + +LH IVH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 465 GDLKPQNIL---LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
DLKP+N+L LD + I DFG+ ++ ED P STA G+ Y PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--ED----PGSVLSTAC-GTPGYVAPEVLAQ 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+I LL G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTL--LG 404
+G G F V E + VAIK + ++G + + E+ VL K++HP++V L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
L+ + + G L DR+ K + +D +R+ ++ + +LH IVH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 465 GDLKPQNIL---LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
DLKP+N+L LD + I DFG+ ++ ED P STA G+ Y PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--ED----PGSVLSTAC-GTPGYVAPEVLAQ 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+I LL G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 349 KVGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQLE--FQQEVRVLSKLQHPHLVTLLG 404
K+G+G +G V+K G+ VAIK ++ +E+R+L +L+HP+LV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 405 AC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
LV+EY + L + + V L K I + + F H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS---ITWQTLQAVNFCHK---HNC 123
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS-----FHRSTAPKGSFPYADPE 517
+H D+KP+NIL+ K+CDFG RL+T + Y ++RS D +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP----ELLVGDTQ 179
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTG 543
Y P D ++ G + +LL+G
Sbjct: 180 Y------GPPVDVWAIGCVFAELLSG 199
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 350 VGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTL--LG 404
+G G F V E G+ A+K + ++G + + E+ VL K++H ++V L +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
P LV + + G L DR+ K + KD + + ++ + +LH IVH
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGFYTE---KDASTLIRQVLDAVYYLHRMG---IVH 143
Query: 465 GDLKPQNILL---DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
DLKP+N+L D E I DFG+ ++ + + STA G+ Y PE
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV------MSTAC-GTPGYVAPEVLAQ 196
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+I LL G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 349 KVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G+G G C+ + + GR VA+KM+ Q + EV ++ QH ++V + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 407 ---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
E W L+ E+L G+L D + S V L + A + + L +LH+ + ++
Sbjct: 112 LVGEELWVLM-EFLQGGALTDIV---SQVR-LNEEQIATVCEAVLQALAYLHA---QGVI 163
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV 523
H D+K +ILL + K+ DFG C +++D + G+ + PE +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------PKRKXLVGTPYWMAPEVISRSL 217
Query: 524 LTPKSDSYSFGLIILQLLTGRLP 546
+ D +S G+++++++ G P
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQ-QEVRVLSKLQHPH 398
NF + K+G+G +G VYK ++ G VA+K + +G +E+ +L +L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 399 LVTLLGAC--PEAWSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
+V LL LV+E++ + D PL+ ++ GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLI----KSYLFQLLQGLAFC 118
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
HS +++H DLKPQN+L+++E + K+ DFG+ R
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 341 TCNFSESFKV----GQGGFG----CVYKG---EMLGRTVAIKMLYSHNMQGQLEFQQEVR 389
+ FS+++ V G+G F CV+K E + + K L + + Q + ++E R
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREAR 57
Query: 390 VLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEI 447
+ KLQHP++V L + E LV++ + G L + + + S D + +I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCIQQI 114
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRS 504
+ + HS+ IVH +LKP+N+LL S+ + K+ DFG+ V + ++H
Sbjct: 115 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGF 167
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G Y PE + + D ++ G+I+ LL G P
Sbjct: 168 AGTPG---YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 31/235 (13%)
Query: 350 VGQGGFG----CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLG 404
+G+G F CV+K + A+K++ S M+ Q+E+ L + HP++V L
Sbjct: 19 LGEGSFSICRKCVHKKS--NQAFAVKII-SKRMEANT--QKEITALKLCEGHPNIVKLHE 73
Query: 405 ACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ LV E L G L +R+ +K + S + + I ++ S + +H +
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSHMHDVG---V 127
Query: 463 VHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
VH DLKP+N+L E L KI DFG RL D L + P + YA PE
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT------PCFTLHYAAPELL 181
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL-AGDW 573
D +S G+I+ +L+G++P R+++C I+ + GD+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPF---QSHDRSLTCTSAVEIMKKIKKGDF 233
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 344 FSESFKV----GQGGFG----CVYKG---EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLS 392
FS+++ V G+G F CV+K E + + K L + + Q + ++E R+
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICR 59
Query: 393 KLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
KLQHP++V L + E LV++ + G L + + + S D + +I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCIQQILES 116
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
+ + HS+ IVH +LKP+N+LL S+ + K+ DFG+ V + ++H
Sbjct: 117 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGT 169
Query: 508 KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G Y PE + + D ++ G+I+ LL G P
Sbjct: 170 PG---YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 112/264 (42%), Gaps = 50/264 (18%)
Query: 340 ATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQ 395
AT + ++G G +G VYK G VA+K + N + L +EV +L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HPHLVTLLGACPEA-------WSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRAR-I 443
HP++V L+ C + +LV+E++ QD R + P L + + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 444 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 503
+ GL FLH++ IVH DLKP+NIL+ S + K+ DFG+ R+ + P
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV-- 172
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG--- 560
+ Y PE D +S G I ++ R+ + CG
Sbjct: 173 -----VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-----------RKPLFCGNSE 216
Query: 561 --KLSSILD----PLAGDWPTFVA 578
+L I D P DWP V+
Sbjct: 217 ADQLGKIFDLIGLPPEDDWPRDVS 240
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 341 TCNFSESFKV----GQGGFG----CVYKG---EMLGRTVAIKMLYSHNMQGQLEFQQEVR 389
+ FS+++ V G+G F CV+K E + + K L + + Q + ++E R
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREAR 57
Query: 390 VLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEI 447
+ KLQHP++V L + E LV++ + G L + + + S D + +I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCIQQI 114
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRS 504
+ + HS+ IVH +LKP+N+LL S+ + K+ DFG+ V + ++H
Sbjct: 115 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGF 167
Query: 505 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G Y PE + + D ++ G+I+ LL G P
Sbjct: 168 AGTPG---YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 322 LVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQ 381
+VED E E + + F+ K Q G G Y + + + ++ S +
Sbjct: 2 MVEDHYEMGE------ELGSGQFAIVRKCRQKGTGKEYAAKFIKKR---RLSSSRRGVSR 52
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKD 439
E ++EV +L +++HP+++TL L+ E + G L D L K +++ +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DE 109
Query: 440 RARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDT 495
+ +I G+ +LHS ++I H DLKP+NI LLD + + K+ DFGI +
Sbjct: 110 ATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166
Query: 496 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 167 EFKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 350 VGQGGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
+G+G +G VY G L V AIK + + + +E+ + L+H ++V LG+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 408 EAW--SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA----EIASGLCFLHSSKPEK 461
E + E +P GSL L +S PL KD + +I GL +LH + +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL--RSKWGPL--KDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 462 IVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
IVH D+K N+L+++ KI DFG + + +F G+ Y PE
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF------TGTLQYMAPEIID 196
Query: 521 TGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV 557
G +D +S G I+++ TG+ P GE + A+
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 235
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 349 KVGQGGFGCVYK--GEMLGRTVAIKMLYSHNMQG------QLEFQQEVRVLSKLQHPHLV 400
++G G F V K + G+ A K + + + E ++EV +L +++HP+++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 401 TLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
TL L+ E + G L D L K +++ + + +I G+ +LHS
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQILDGVHYLHS-- 133
Query: 459 PEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
++I H DLKP+NI LLD + + K+ DFGI + + F G+ +
Sbjct: 134 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-------GTPEFV 185
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE L ++D +S G+I LL+G P
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 343 NFSESFKVGQGGFGCVYK------GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH 396
+F ++G G G V K G ++ R + I + ++ Q+ +E++VL +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKL-IHLEIKPAIRNQI--IRELQVLHECNS 73
Query: 397 PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL 454
P++V GA S+ E++ GSL D++ +++ P + IA + GL +L
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIA--VLRGLAYL 130
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
+I+H D+KP NIL++S K+CDFG+ + + + + G+ Y
Sbjct: 131 REK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------ANSFVGTRSYM 180
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
PE + + +SD +S GL +++L GR P+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 387 EVRVLSKLQHPHLVT----LLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA- 441
EV +L +L+HP++V ++ +V EY G L + + + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 RIAAEIASGL--CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R+ ++ L C S ++H DLKP N+ LD + + K+ DFG+ R++ DT +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG------LAGEV 553
+F G+ Y PE KSD +S G ++ +L P LAG++
Sbjct: 175 TF------VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 554 R 554
R
Sbjct: 229 R 229
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA---- 405
VG+G +G V++G G +VA+K+ S + Q + E+ L+H +++ + +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMTS 74
Query: 406 ---CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH------S 456
+ W L+ Y +GSL D L R++ + P L R+A A GL LH
Sbjct: 75 RNSSTQLW-LITHYHEHGSLYDFLQRQT-LEPHL---ALRLAVSAACGLAHLHVEIFGTQ 129
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK-GSFPYAD 515
KP I H D K +N+L+ S L I D G+ + ++ + YL P+ G+ Y
Sbjct: 130 GKP-AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI---GNNPRVGTKRYMA 185
Query: 516 PEYHRTGVLTPKSDSY------SFGLIILQLLTGRLPVGLAGEVR 554
PE + T +SY +FGL++ ++ + G+ + R
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYR 230
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 387 EVRVLSKLQHPHLVT----LLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA- 441
EV +L +L+HP++V ++ +V EY G L + + + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 RIAAEIASGL--CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R+ ++ L C S ++H DLKP N+ LD + + K+ DFG+ R++ DT +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG------LAGEV 553
+F G+ Y PE KSD +S G ++ +L P LAG++
Sbjct: 175 AF------VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 554 R 554
R
Sbjct: 229 R 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGA 405
++G+G FG V+ G + + + + +F QE R+L + HP++V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 406 CPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
C + +V E + G F ++ + L K ++ + A+G+ +L S + +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLT--FLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCI 235
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV 523
H DL +N L+ + KI DFG+ R D +Y S P + PE G
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVP---VKWTAPEALNYGR 291
Query: 524 LTPKSDSYSFGLIILQLLT 542
+ +SD +SFG+++ + +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 350 VGQGGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP 407
+G+G +G VY G L V AIK + + + +E+ + L+H ++V LG+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 408 EAW--SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA----EIASGLCFLHSSKPEK 461
E + E +P GSL L +S PL KD + +I GL +LH + +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL--RSKWGPL--KDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 462 IVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
IVH D+K N+L+++ KI DFG + + +F G+ Y PE
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF------TGTLQYMAPEIID 182
Query: 521 TGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV 557
G +D +S G I+++ TG+ P GE + A+
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 30/206 (14%)
Query: 357 CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ---------HPHLVTLLGACP 407
CV++ G A+K++ + E +EVR ++ + HPH++TL+ +
Sbjct: 113 CVHRA--TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 408 EA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 465
+ LV++ + G L D L K +S K+ I + + FLH++ IVH
Sbjct: 171 SSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSFLHANN---IVHR 224
Query: 466 DLKPQNILLDSELSSKICDFGI-CRLVTEDTLY----LPSFHRSTAPKGSFPYADPEYHR 520
DLKP+NILLD + ++ DFG C L + L P + K S P Y +
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G+I+ LL G P
Sbjct: 285 ------EVDLWACGVILFTLLAGSPP 304
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 315 NYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLY 374
N D F+ +D + DL+ ++ +G+G FG V L R + + +Y
Sbjct: 46 NIDNFLSRYKDTINK----IRDLRMKAEDYEVVKVIGRGAFGEV----QLVRHKSTRKVY 97
Query: 375 SHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACPEAWSL--VYEYLPNGSLQ 423
+ + + E F +E +++ P +V L A + L V EY+P G L
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 424 DRLFRKSNVS-PLLWKDRARI-AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 481
+ + SN P W AR AE+ L +HS +H D+KP N+LLD K
Sbjct: 158 NLM---SNYDVPEKW---ARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 208
Query: 482 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLII 537
+ DFG C + ++ + R G+ Y PE ++ G + D +S G+ +
Sbjct: 209 LADFGTCMKMNKEGMV-----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263
Query: 538 LQLLTGRLP 546
++L G P
Sbjct: 264 YEMLVGDTP 272
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ HP+++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 344 FSESFKVGQGGFGCVYKG---------EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL 394
F+ES +GQG F ++KG ++ V +K+L + F + ++SKL
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 395 QHPHLVTLLG--ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
H HLV G C + LV E++ GSL L + N +LWK +A ++A+ +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMH 127
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG--- 509
FL + ++HG++ +NILL E K + +L P + PK
Sbjct: 128 FLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD------PGISITVLPKDILQ 178
Query: 510 -SFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTG 543
P+ PE L +D +SFG + ++ +G
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 315 NYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLY 374
N D F+ +D + DL+ ++ +G+G FG V L R + + +Y
Sbjct: 51 NIDNFLSRYKDTINK----IRDLRMKAEDYEVVKVIGRGAFGEV----QLVRHKSTRKVY 102
Query: 375 SHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACPEAWSL--VYEYLPNGSLQ 423
+ + + E F +E +++ P +V L A + L V EY+P G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 424 DRLFRKSNVS-PLLWKDRARI-AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 481
+ + SN P W AR AE+ L +HS +H D+KP N+LLD K
Sbjct: 163 NLM---SNYDVPEKW---ARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 213
Query: 482 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLII 537
+ DFG C + ++ + R G+ Y PE ++ G + D +S G+ +
Sbjct: 214 LADFGTCMKMNKEGMV-----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 538 LQLLTGRLP 546
++L G P
Sbjct: 269 YEMLVGDTP 277
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 53/263 (20%)
Query: 340 ATCNFSESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQ-----LEFQQEVRVLS 392
AT + ++G G +G VYK G VA+K + N G + +EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 393 KLQ---HPHLVTLLGACPEA-------WSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRA 441
+L+ HP++V L+ C + +LV+E++ QD R + P L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETI 122
Query: 442 R-IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+ + + GL FLH++ IVH DLKP+NIL+ S + K+ DFG+ R+ + P
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV 179
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG 560
+ Y PE D +S G I ++ R+ + CG
Sbjct: 180 V-------VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-----------RKPLFCG 221
Query: 561 -----KLSSILD----PLAGDWP 574
+L I D P DWP
Sbjct: 222 NSEADQLGKIFDLIGLPPEDDWP 244
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 315 NYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLY 374
N D F+ +D + DL+ ++ +G+G FG V L R + + +Y
Sbjct: 51 NIDNFLSRYKDTINK----IRDLRMKAEDYEVVKVIGRGAFGEV----QLVRHKSTRKVY 102
Query: 375 SHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACPEAWSL--VYEYLPNGSLQ 423
+ + + E F +E +++ P +V L A + L V EY+P G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 424 DRLFRKSNVS-PLLWKDRARI-AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 481
+ + SN P W AR AE+ L +HS +H D+KP N+LLD K
Sbjct: 163 NLM---SNYDVPEKW---ARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 213
Query: 482 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLII 537
+ DFG C + ++ + R G+ Y PE ++ G + D +S G+ +
Sbjct: 214 LADFGTCMKMNKEGMV-----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 268
Query: 538 LQLLTGRLP 546
++L G P
Sbjct: 269 YEMLVGDTP 277
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 37/248 (14%)
Query: 315 NYDGFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLY 374
N D F+ E + + + LQ ++ +G+G FG V L R A + +Y
Sbjct: 52 NIDNFLNRYEKIVKK----IRGLQMKAEDYDVVKVIGRGAFGEV----QLVRHKASQKVY 103
Query: 375 SHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACPEAWSL--VYEYLPNGSLQ 423
+ + + E F +E +++ P +V L A + L V EY+P G L
Sbjct: 104 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV 163
Query: 424 DRLFRKSNVS-PLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 482
+ + SN P W AE+ L +HS ++H D+KP N+LLD K+
Sbjct: 164 NLM---SNYDVPEKWA--KFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKL 215
Query: 483 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLIIL 538
DFG C + E + H TA G+ Y PE ++ G + D +S G+ +
Sbjct: 216 ADFGTCMKMDETGM----VHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 539 QLLTGRLP 546
++L G P
Sbjct: 271 EMLVGDTP 278
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 101/245 (41%), Gaps = 43/245 (17%)
Query: 348 FKVGQGGFGCVYKGEMLGRTVAI--------KMLYSHNMQGQLEFQQEVRVLSKLQHPHL 399
++G+G F VYKG TV + K+ S + F++E L LQHP++
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR----FKEEAEXLKGLQHPNI 87
Query: 400 VTLLGACPEAWS----------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS 449
V ++W LV E +G+L+ L R + + R +I
Sbjct: 88 VRFY----DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR---QILK 140
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPK 508
GL FLH+ P I+H DLK NI + S KI D G+ TL SF ++
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA------TLKRASFAKAVI-- 191
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL---AGEVRRAVSCGKLSSI 565
G+ + PE + D Y+FG L+ T P A ++ R V+ G +
Sbjct: 192 GTPEFXAPEXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS 250
Query: 566 LDPLA 570
D +A
Sbjct: 251 FDKVA 255
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 36/215 (16%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE 408
++G+G +G V+ G+ G VA+K+ ++ + E+ ++H +++ + A +
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAADIK 102
Query: 409 ---AWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS------ 456
+W+ +Y +Y NGSL D L + L K ++A SGLC LH+
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT--LYLPSFHRSTAPKGSFPYA 514
KP I H DLK +NIL+ + I D G+ DT + +P R G+ Y
Sbjct: 159 GKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV----GTKRYM 213
Query: 515 DPE---------YHRTGVLTPKSDSYSFGLIILQL 540
PE + ++ ++ +D YSFGLI+ ++
Sbjct: 214 PPEVLDESLNRNHFQSYIM---ADMYSFGLILWEV 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 349 KVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG VYK + G A K++ + + + ++ E+ +L+ HP++V LLGA
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 407 ---PEAWSLVYEYLPNGSLQ------DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
+ W ++ E+ P G++ DR + + + ++ L FLHS
Sbjct: 86 YHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEALNFLHS- 135
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++I+H DLK N+L+ E ++ DFG+ L + + + G+ + PE
Sbjct: 136 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPE 187
Query: 518 YHRTGVL--TP---KSDSYSFGLIILQL 540
+ TP K+D +S G+ ++++
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 35/290 (12%)
Query: 348 FKVGQGGFGCVYKGEML--GRTVAIKMLYSH-NMQGQLEFQQEVRV-LSKLQHPHLVTLL 403
++G+G +G V K + G+ +A+K + + N Q Q ++ + + + P VT
Sbjct: 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKD-RARIAAEIASGLCFLHSSK 458
GA + W + L + SL D+ +++ + + +D +IA I L LHS
Sbjct: 117 GALFREGDVW--ICMELMDTSL-DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA---- 514
++H D+KP N+L+++ K+CDFGI + YL T G PY
Sbjct: 174 --SVIHRDVKPSNVLINALGQVKMCDFGI-------SGYLVDSVAKTIDAGCKPYMAPER 224
Query: 515 -DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 573
+PE ++ G + KSD +S G+ +++L R P G +L +++ +
Sbjct: 225 INPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQL 278
Query: 574 PT--FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
P F A VD QC + +ERP + LH ++ V SF
Sbjct: 279 PADKFSA-EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASF 327
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 21/151 (13%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKML-YSHNMQGQLEFQQEVRVLSKLQHPHLVTL--L 403
K+G+G + VYKG+ + VA+K + H +EV +L L+H ++VTL +
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 404 GACPEAWSLVYEYLPNGSLQ-----DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
++ +LV+EYL Q + NV L+ ++ GL + H
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF--------QLLRGLAYCHR-- 118
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+K++H DLKPQN+L++ K+ DFG+ R
Sbjct: 119 -QKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 343 NFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHP 397
+F +G+G FG VY + + +A+K+L+ ++ + + ++E+ + S L+HP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 398 HLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 455
+++ + + L+ E+ P G L L + + A E+A L + H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYCH 131
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
K++H D+KP+N+L+ + KI DFG +++ PS R G+ Y
Sbjct: 132 E---RKVIHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRRXM-CGTLDYLP 180
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE K D + G++ + L G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 343 NFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHP 397
+F +G+G FG VY + + +A+K+L+ ++ + + ++E+ + S L+HP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 398 HLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 455
+++ + + L+ E+ P G L L + + A E+A L + H
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYCH 132
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYAD 515
K++H D+KP+N+L+ + KI DFG +++ PS R G+ Y
Sbjct: 133 E---RKVIHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRRXM-CGTLDYLP 181
Query: 516 PEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PE K D + G++ + L G P
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 349 KVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG VYK + G A K++ + + + ++ E+ +L+ HP++V LLGA
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 407 ---PEAWSLVYEYLPNGSLQ------DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
+ W ++ E+ P G++ DR + + + ++ L FLHS
Sbjct: 78 YHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEALNFLHS- 127
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
++I+H DLK N+L+ E ++ DFG+ L + + + G+ + PE
Sbjct: 128 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS------AKNLKTLQKRDSFIGTPYWMAPE 179
Query: 518 YHRTGVL--TP---KSDSYSFGLIILQL 540
+ TP K+D +S G+ ++++
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 115
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 116 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 173 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 115
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 116 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 173 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHPHLVTLLG 404
+G+G FG VY + + +A+K+L+ ++ + + ++E+ + S L+HP+++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 405 ACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ L+ E+ P G L L + + A E+A L + H K+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYCHE---RKV 135
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H D+KP+N+L+ + KI DFG +++ PS R G+ Y PE
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRRXM-CGTLDYLPPEMIEGK 187
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
K D + G++ + L G P
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 344 FSESFKVGQGGFGCVYKG---------EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL 394
F+ES +GQG F ++KG ++ V +K+L + F + ++SKL
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 395 QHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
H HLV G C + LV E++ GSL L + N +LWK +A ++A +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAMH 127
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG--- 509
FL + ++HG++ +NILL E K + +L P + PK
Sbjct: 128 FLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD------PGISITVLPKDILQ 178
Query: 510 -SFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTG 543
P+ PE L +D +SFG + ++ +G
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGA 405
++G+G FG V+ G + + + + +F QE R+L + HP++V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 406 CPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
C + +V E + G F ++ + L K ++ + A+G+ +L S + +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLT--FLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCI 235
Query: 464 HGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV 523
H DL +N L+ + KI DFG+ R + R K + PE G
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK----WTAPEALNYGR 291
Query: 524 LTPKSDSYSFGLIILQLLT 542
+ +SD +SFG+++ + +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 25/238 (10%)
Query: 318 GFIGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYS 375
G G ++D P+ AE D FS+ ++G G FG VY + VAIK +
Sbjct: 33 GRAGSLKD-PDVAELFFKDDPEKL--FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY 89
Query: 376 HNMQGQLEFQ---QEVRVLSKLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRK 429
Q ++Q +EVR L KL+HP+ + G AW LV EY GS D L +
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW-LVMEYCL-GSASDLL--E 145
Query: 430 SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
+ PL + A + GL +LHS ++H D+K NILL K+ DFG
Sbjct: 146 VHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202
Query: 490 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
++ ++ + + AP+ + +Y K D +S G+ ++L + P+
Sbjct: 203 IMAPANXFVGTPYW-MAPEVILAMDEGQY------DGKVDVWSLGITCIELAERKPPL 253
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 348 FKVGQGGFGCVYKGEML--GRTVAIKMLYSH-NMQGQLEFQQEVRV-LSKLQHPHLVTLL 403
++G+G +G V K + G+ +A+K + + N Q Q ++ + + + P VT
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 404 GAC---PEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKD-RARIAAEIASGLCFLHSSK 458
GA + W + L + SL D+ +++ + + +D +IA I L LHS
Sbjct: 73 GALFREGDVW--ICMELMDTSL-DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA---- 514
++H D+KP N+L+++ K+CDFGI + +D G PY
Sbjct: 130 --SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-------AKDIDAGCKPYMAPER 180
Query: 515 -DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 573
+PE ++ G + KSD +S G+ +++L R P G +L +++ +
Sbjct: 181 INPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQL 234
Query: 574 PT--FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
P F A VD QC + +ERP + LH ++ V SF
Sbjct: 235 PADKFSA-EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASF 283
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ ++EV +L ++QHP+++TL L+ E + G L D L K +++ ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEA 116
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSELSS---KICDFGICRLVTEDTL 496
+I +G+ +LHS +I H DLKP+NI LLD + KI DFG+ +
Sbjct: 117 TEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 174 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 386 QEVRVLSKLQ-HPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+EV +L K+ HP+++ L + LV++ + G L D L K +S K+ +
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRK 115
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLY---- 497
I + +C LH IVH DLKP+NILLD +++ K+ DFG C+L + L
Sbjct: 116 IMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PS+ + S P Y + + D +S G+I+ LL G P
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGK------EVDMWSTGVIMYTLLAGSPP 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEF 384
P+ AE D FS+ ++G G FG VY + VAIK + Q ++
Sbjct: 2 PDVAELFFKDDPEKL--FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 385 Q---QEVRVLSKLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK 438
Q +EVR L KL+HP+ + G AW LV EY GS D L + + PL
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW-LVMEYCL-GSASDLL--EVHKKPLQEV 115
Query: 439 DRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 498
+ A + GL +LHS ++H D+K NILL K+ DFG ++ ++
Sbjct: 116 EIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 547
+ + AP+ + +Y K D +S G+ ++L + P+
Sbjct: 173 GTPY-WMAPEVILAMDEGQY------DGKVDVWSLGITCIELAERKPPL 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + K+ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 338 QTATCNFSESFKV-GQGGFG--CVYKGEMLGRTVAIKMLYSHNMQ---GQLEFQQEVRVL 391
Q T N ++V G+GGFG C + G+ A K L ++ G+ E ++L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 392 SKLQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIA 448
K+ +V+L A +A LV + G L+ ++ + RA AAEI
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEIC 296
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
GL LH E+IV+ DLKP+NILLD +I D G+ +++P
Sbjct: 297 CGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL-------AVHVPEGQTIKGRV 346
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + T D ++ G ++ +++ G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHR 520
I H D+KP+N+LLD + KI DFG+ + Y G+ PY PE R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPELLKR 180
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D +S G+++ +L G LP
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 70
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 71 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 124
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 125 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 179
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 386 QEVRVLSKLQ-HPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+EV +L K+ HP+++ L + LV++ + G L D L K +S K+ +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRK 128
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLY---- 497
I + +C LH IVH DLKP+NILLD +++ K+ DFG C+L + L
Sbjct: 129 IMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PS+ + S P Y + + D +S G+I+ LL G P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGK------EVDMWSTGVIMYTLLAGSPP 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 336 DLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRV 390
++ +FS +G+GGFG VY + G+ A+K L + QG+ E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 391 LSKLQH---PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
LS + P +V + A P+ S + + + G L L + S D AA
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAA 299
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRS 504
EI GL +H+ +V+ DLKP NILLD +I D G+ C S +
Sbjct: 300 EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF---------SKKKP 347
Query: 505 TAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGRLP 546
A G+ Y PE + GV S D +S G ++ +LL G P
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 336 DLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRV 390
++ +FS +G+GGFG VY + G+ A+K L + QG+ E +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 391 LSKLQH---PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
LS + P +V + A P+ S + + + G L L + S D AA
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAA 298
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRS 504
EI GL +H+ +V+ DLKP NILLD +I D G+ C S +
Sbjct: 299 EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF---------SKKKP 346
Query: 505 TAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGRLP 546
A G+ Y PE + GV S D +S G ++ +LL G P
Sbjct: 347 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 338 QTATCNFSESFKV-GQGGFG--CVYKGEMLGRTVAIKMLYSHNMQ---GQLEFQQEVRVL 391
Q T N ++V G+GGFG C + G+ A K L ++ G+ E ++L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 392 SKLQHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIA 448
K+ +V+L A +A LV + G L+ ++ + RA AAEI
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEIC 296
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 508
GL LH E+IV+ DLKP+NILLD +I D G+ +++P
Sbjct: 297 CGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL-------AVHVPEGQTIKGRV 346
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE + T D ++ G ++ +++ G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHR 520
I H D+KP+N+LLD + KI DFG+ + Y G+ PY PE R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPELLKR 181
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D +S G+++ +L G LP
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 26/269 (9%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHP 397
NF K+G+G F VY+ L G VA+K + ++ + + + +E+ +L +L HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 398 HLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA--RIAAEIASGLCF 453
+++ + E ++V E G L R+ + L +R + ++ S L
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS +++H D+KP N+ + + K+ D G+ R + T S G+ Y
Sbjct: 152 MHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL------VGTPYY 202
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS-CGKLSSI-LDPLAG 571
PE KSD +S G ++ ++ + P G+ S C K+ PL
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--FYGDKMNLYSLCKKIEQCDYPPLPS 260
Query: 572 DWPTFVARRLVDLGLQCCELYGRERPDIT 600
D + R+LV++ C +RPD+T
Sbjct: 261 DHYSEELRQLVNM---CINPDPEKRPDVT 286
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + K+ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 75
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 76 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 129
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 130 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 184
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 386 QEVRVLSKLQ-HPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+EV +L K+ HP+++ L + LV++ + G L D L K +S K+ +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRK 128
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLY---- 497
I + +C LH IVH DLKP+NILLD +++ K+ DFG C+L + L
Sbjct: 129 IMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
PS+ + S P Y + + D +S G+I+ LL G P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGK------EVDMWSTGVIMYTLLAGSPP 228
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 69
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 70 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 123
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 124 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 178
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 19/181 (10%)
Query: 387 EVRVLSKLQHPHLVT----LLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA- 441
EV +L +L+HP++V ++ +V EY G L + + + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 442 RIAAEIASGL--CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
R+ ++ L C S ++H DLKP N+ LD + + K+ DFG+ R++ D +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG------LAGEV 553
F G+ Y PE KSD +S G ++ +L P LAG++
Sbjct: 175 EF------VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 554 R 554
R
Sbjct: 229 R 229
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 335 ADLQTATCNFSESFKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLS 392
D ++ NF K+G+G G C+ G+ VA+K + Q + EV ++
Sbjct: 147 GDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 203
Query: 393 KLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS 449
QH ++V + + E W +V E+L G+L D + + + A + +
Sbjct: 204 DYQHENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQ 258
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
L LH+ + ++H D+K +ILL + K+ DFG C V+++ R G
Sbjct: 259 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVG 309
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + PE P+ D +S G+++++++ G P
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 72
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 73 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 126
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 127 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 181
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 350 VGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGAC 406
+ +GGF VY+ + +G R A+K L S+ + QEV + KL HP++V A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 407 P---------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
+A L+ L G L + L + + PL +I + + +H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFG 486
KP I+H DLK +N+LL ++ + K+CDFG
Sbjct: 156 KP-PIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 336 DLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRV 390
++ +FS +G+GGFG VY + G+ A+K L + QG+ E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 391 LSKLQH---PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
LS + P +V + A P+ S + + + G L L + S D AA
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAA 299
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRS 504
EI GL +H+ +V+ DLKP NILLD +I D G+ C S +
Sbjct: 300 EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF---------SKKKP 347
Query: 505 TAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGRLP 546
A G+ Y PE + GV S D +S G ++ +LL G P
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 336 DLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNM---QGQLEFQQEVRV 390
++ +FS +G+GGFG VY + G+ A+K L + QG+ E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 391 LSKLQH---PHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
LS + P +V + A P+ S + + + G L L + S D AA
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAA 299
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRS 504
EI GL +H+ +V+ DLKP NILLD +I D G+ C S +
Sbjct: 300 EIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF---------SKKKP 347
Query: 505 TAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGRLP 546
A G+ Y PE + GV S D +S G ++ +LL G P
Sbjct: 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + K+ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 335 ADLQTATCNFSESFKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLS 392
D ++ NF K+G+G G C+ G+ VA+K + Q + EV ++
Sbjct: 27 GDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 83
Query: 393 KLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS 449
QH ++V + + E W +V E+L G+L D + + + A + +
Sbjct: 84 DYQHENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQ 138
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
L LH+ + ++H D+K +ILL + K+ DFG C V+++ R G
Sbjct: 139 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVG 189
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + PE P+ D +S G+++++++ G P
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 335 ADLQTATCNFSESFKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLS 392
D ++ NF K+G+G G C+ G+ VA+K + Q + EV ++
Sbjct: 25 GDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 81
Query: 393 KLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS 449
QH ++V + + E W +V E+L G+L D + + + A + +
Sbjct: 82 DYQHENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQ 136
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
L LH+ + ++H D+K +ILL + K+ DFG C V+++ R G
Sbjct: 137 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVG 187
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + PE P+ D +S G+++++++ G P
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 348 FKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
K+G+G G C+ G+ VA+K + Q + EV ++ QH ++V + +
Sbjct: 30 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 406 C---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
E W +V E+L G+L D + + + A + + L LH+ + +
Sbjct: 90 YLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGV 141
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H D+K +ILL + K+ DFG C V+++ R G+ + PE
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVGTPYWMAPELISRL 195
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
P+ D +S G+++++++ G P
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 95
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 96 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 149
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 150 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 204
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL------ 403
+G+G FG V++G+ G VA+K+ S + + E+ L+H +++ +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 108
Query: 404 -GACPEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLH------ 455
G + W LV +Y +GSL D L R + V ++ ++A ASGL LH
Sbjct: 109 NGTWTQLW-LVSDYHEHGSLFDYLNRYTVTVEGMI-----KLALSTASGLAHLHMEIVGT 162
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGIC--RLVTEDTLYLPSFHRSTAPKGSFPY 513
KP I H DLK +NIL+ + I D G+ DT+ + HR G+ Y
Sbjct: 163 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTKRY 217
Query: 514 ADPEYHRTGVLT------PKSDSYSFGLIILQL 540
PE + ++D Y+ GL+ ++
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 350 VGQGGFGCVYK-GEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP- 407
+G+G FG V++ E + + Q+ ++E+ +L+ +H +++ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 408 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA--EIASGLCFLHSSKPEKIVH 464
E +++E++ + +R+ N S +R ++ ++ L FLHS I H
Sbjct: 73 MEELVMIFEFISGLDIFERI----NTSAFELNEREIVSYVHQVCEALQFLHS---HNIGH 125
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
D++P+NI+ + SS KI +FG R + + F TAP+ Y PE H+
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF---TAPE----YYAPEVHQHD 178
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
V++ +D +S G ++ LL+G P
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 82/278 (29%)
Query: 334 LADLQTATCNFSESFKVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQ-GQLEFQQEVRV 390
L D + C +G+GGFG V+ K ++ AIK + N + + + +EV+
Sbjct: 5 LTDFEPIQC-------MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA 57
Query: 391 LSKLQHPHLVTLLGAC----PEAW------------------------------------ 410
L+KL+HP +V A PE W
Sbjct: 58 LAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDP 117
Query: 411 ----SLVYEYLPNGS-----LQDRLFRKSNVSPLLWKDR------------ARIAAEIAS 449
+ V + P+ +Q +L RK N+ W +R I +IA
Sbjct: 118 FSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKD--WMNRRCSLEDREHGVCLHIFIQIAE 175
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED------TLYLPSFHR 503
+ FLHS + ++H DLKP NI + K+ DFG+ + +D +P++
Sbjct: 176 AVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 504 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
G+ Y PE + K D +S GLI+ +LL
Sbjct: 233 HXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 348 FKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
K+G+G G C+ G+ VA+K + Q + EV ++ QH ++V + +
Sbjct: 26 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 406 C---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
E W +V E+L G+L D + + + A + + L LH+ + +
Sbjct: 86 YLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGV 137
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H D+K +ILL + K+ DFG C V+++ R G+ + PE
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVGTPYWMAPELISRL 191
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP 546
P+ D +S G+++++++ G P
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LXEXVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 16 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 72
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 73 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 189 LXEXVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+G+GGF V E L G A+K + H Q + E Q+E + HP+++ L+ C
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 407 -------PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHSSK 458
EAW L+ + G+L + + R + L +D+ + I GL +H+
Sbjct: 96 LRERGAKHEAW-LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR---LVTEDTLYLPSFHRSTAPKGSFPYAD 515
+ H DLKP NILL E + D G + E + + A + + Y
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 516 PEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLA 550
PE V+ ++D +S G ++ ++ G P +
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHR 520
I H D+KP+N+LLD + KI DFG+ + Y G+ PY PE R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPELLKR 180
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D +S G+++ +L G LP
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 335 ADLQTATCNFSESFKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLS 392
D ++ NF K+G+G G C+ G+ VA+K + Q + EV ++
Sbjct: 70 GDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR 126
Query: 393 KLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS 449
QH ++V + + E W +V E+L G+L D + + + A + +
Sbjct: 127 DYQHENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQ 181
Query: 450 GLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 509
L LH+ + ++H D+K +ILL + K+ DFG C V+++ R G
Sbjct: 182 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------PRRKXLVG 232
Query: 510 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + PE P+ D +S G+++++++ G P
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHR 520
I H D+KP+N+LLD + KI DFG+ + Y G+ PY PE R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPELLKR 180
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D +S G+++ +L G LP
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE-YHR 520
I H D+KP+N+LLD + KI DFG+ + Y G+ PY PE R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPELLKR 180
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D +S G+++ +L G LP
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 39/213 (18%)
Query: 350 VGQGGFG----CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
+G+G +G V KG + R A K + + ++ F+QE+ ++ L HP+++ L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 406 CPEAWS--LVYEYLPNGSL-----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
+ LV E G L R+FR+S D ARI ++ S + + H
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVHKRVFRES--------DAARIMKDVLSAVAYCHKL- 125
Query: 459 PEKIVHGDLKPQNILL-----DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+ H DLKP+N L DS L K+ DFG+ + P T K PY
Sbjct: 126 --NVAHRDLKPENFLFLTDSPDSPL--KLIDFGLA------ARFKPGKMMRT--KVGTPY 173
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ P+ D +S G+++ LL G P
Sbjct: 174 YVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 350 VGQGGFG----CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
+G+G +G V KG + R A K + + ++ F+QE+ ++ L HP+++ L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 406 CPEAWS--LVYEYLPNGSL-----QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
+ LV E G L R+FR+S D ARI ++ S + + H
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVHKRVFRES--------DAARIMKDVLSAVAYCHKL- 142
Query: 459 PEKIVHGDLKPQNILL-----DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+ H DLKP+N L DS L K+ DFG+ + P T G+ Y
Sbjct: 143 --NVAHRDLKPENFLFLTDSPDSPL--KLIDFGLA------ARFKPGKMMRTK-VGTPYY 191
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P+ G+ P+ D +S G+++ LL G P
Sbjct: 192 VSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRK--SNV--SPLLWKDRAR-IAAEIASGLCFLHSSKP 459
A SL E + L L +N+ S L D + + +I GL ++HS+
Sbjct: 89 VFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD- 145
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
I+H DLKP N+ ++ + KI DFG+CR ++ + AP+ + Y+
Sbjct: 146 --IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWM--HYN 201
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGR 544
+T D +S G I+ +LLTGR
Sbjct: 202 QT------VDIWSVGCIMAELLTGR 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 395 QHPHLVTLLGACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
HP LV L +C + S V EY+ G L + R+ L ++ AR +AEI+
Sbjct: 79 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLA 133
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR--LVTEDTLYLPSFHRSTAPK 508
L +LH I++ DLK N+LLDSE K+ D+G+C+ L DT ++
Sbjct: 134 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--------TSXFC 182
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
G+ Y PE R D ++ G+++ +++ GR P + G
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 9 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 65
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 66 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 182 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 395 QHPHLVTLLGACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
HP LV L +C + S V EY+ G L + R+ L ++ AR +AEI+
Sbjct: 111 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLA 165
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR--LVTEDTLYLPSFHRSTAPK 508
L +LH I++ DLK N+LLDSE K+ D+G+C+ L DT ++
Sbjct: 166 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--------TSTFC 214
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
G+ Y PE R D ++ G+++ +++ GR P + G
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 16 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 72
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 73 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 189 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 17 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 73
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 74 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 132
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 133 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 190 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 8 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 64
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 65 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 123
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 124 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 181 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 123
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+ + G ++KG G + +K+L + + +F +E L HP+++ +LGAC
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 407 --PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
P A +L+ ++P GSL + L +N + + A ++A G+ FLH+ +P
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARGMAFLHTLEPLIP 135
Query: 463 VHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
H L +++++D +++++I + + +Y P++ AP+ + R+
Sbjct: 136 RHA-LNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAW---VAPEALQKKPEDTNRRS 191
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLPVG 548
+D +SF +++ +L+T +P
Sbjct: 192 ------ADMWSFAVLLWELVTREVPFA 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 9 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 65
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 66 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 182 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 11 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 67
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 68 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 184 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 11 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 67
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 68 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 184 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ H +++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 13 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 69
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 70 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 186 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 11 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 67
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 68 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 184 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 125
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 154
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 155 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 202
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLE----FQQEVRVLSKLQHPHLVTLL 403
+G+G +G V + VA+K++ +M+ ++ ++E+ + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 404 GACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
G E L EY G L DR+ + D R ++ +G+ +LH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLHGIG--- 124
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPE-Y 518
I H D+KP+N+LLD + KI DFG+ T++ + K G+ PY PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D +S G+++ +L G LP
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ H +++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G G FG V K G A+K+L + E + E R+L + P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 405 ACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
+ + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD--- 161
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+++ DLKP+N+++D + K+ DFG+ + V T L G+ Y PE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---------GTPEYLAPEIILS 212
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D ++ G++I ++ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 182
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 183 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 230
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 31 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 87
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 88 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 146
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 204 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ H +++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 349 KVGQGGFGCVYKG-EMLGRTVAIKM--LYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
KVG+G +G VYK + GR VA+K L + + +E+ +L +L HP++V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 406 C--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+LV+E++ L+ L N + L ++ G+ H +I+
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRIL 141
Query: 464 HGDLKPQNILLDSELSSKICDFGICR 489
H DLKPQN+L++S+ + K+ DFG+ R
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ H +++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 19 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 75
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 76 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 134
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 135 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 192 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 11 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 67
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 68 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 184 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 349 KVGQGGFGCVYKG-EMLGRTVAIKM--LYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
KVG+G +G VYK + GR VA+K L + + +E+ +L +L HP++V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 406 C--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+LV+E++ L+ L N + L ++ G+ H +I+
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRIL 141
Query: 464 HGDLKPQNILLDSELSSKICDFGICR 489
H DLKPQN+L++S+ + K+ DFG+ R
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 395 QHPHLVTLLGACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
HP LV L +C + S V EY+ G L + R+ L ++ AR +AEI+
Sbjct: 64 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLA 118
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR--LVTEDTLYLPSFHRSTAPK 508
L +LH I++ DLK N+LLDSE K+ D+G+C+ L DT ++
Sbjct: 119 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--------TSXFC 167
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
G+ Y PE R D ++ G+++ +++ GR P + G
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 210
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
E ++EV +L ++ H +++TL L+ E + G L D L +K ++S ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEA 117
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI-LLDSEL---SSKICDFGICRLVTEDTL 496
+I G+ +LH+ +KI H DLKP+NI LLD + K+ DFG+ + +
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 497 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ F G+ + PE L ++D +S G+I LL+G P
Sbjct: 175 FKNIF-------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 395 QHPHLVTLLGACPEAWS---LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASG 450
HP LV L +C + S V EY+ G L + R+ L ++ AR +AEI+
Sbjct: 68 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLA 122
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR--LVTEDTLYLPSFHRSTAPK 508
L +LH I++ DLK N+LLDSE K+ D+G+C+ L DT ++
Sbjct: 123 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--------TSXFC 171
Query: 509 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 551
G+ Y PE R D ++ G+++ +++ GR P + G
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYS--HNMQGQLEFQQEVRVLSKLQHPHLVTLLG- 404
+G G +G C ++ R VAIK + ++ +E+ +L++L H H+V +L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR--ARIAAEIASGLCFLHSSKPEKI 462
P+ E + D F+K +P+ + + + G+ ++HS+ I
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---I 177
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLV 491
+H DLKP N L++ + S K+CDFG+ R V
Sbjct: 178 LHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLE 383
P S S A T+ + K+G+G +G VYK + TVAIK + H +G
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 384 FQ-QEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+EV +L +LQH +++ L L++EY N L+ + + +VS + K
Sbjct: 79 TAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKS- 136
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-----KICDFGICR 489
++ +G+ F HS + +H DLKPQN+LL +S KI DFG+ R
Sbjct: 137 --FLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 333 SLADLQTATCNFSESFKVGQG--GFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRV 390
S D + NF K+G+G G C+ + G+ VA+K + Q + EV +
Sbjct: 39 SPGDPREYLANF---IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVI 95
Query: 391 LSKLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEI 447
+ H ++V + + E W +V E+L G+L D + + + + A + +
Sbjct: 96 MRDYHHDNVVDMYSSYLVGDELW-VVMEFLEGGALTDIVTH----TRMNEEQIATVCLSV 150
Query: 448 ASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAP 507
L +LH+ + ++H D+K +ILL S+ K+ DFG C V+++ P
Sbjct: 151 LRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-----------P 196
Query: 508 KGSFPYADPEYHRTGVLT-----PKSDSYSFGLIILQLLTGRLP 546
K P + V++ + D +S G+++++++ G P
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAI+ + + H Q
Sbjct: 15 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQR 71
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 72 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 188 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 349 KVGQGGFGCVYK--GEMLGRTVAIKMLYS---HNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
++G+G +G V K + G+ +A+K + S Q QL +V V+ P++V
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCPYIVQFY 87
Query: 404 GA---------CPEAWSLVYE--YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
GA C E S ++ Y S+ D + + + + +A+
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKI----------TLATVKA 137
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP 512
H + KI+H D+KP NILLD + K+CDFGI + + T G P
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-------AKTRDAGCRP 190
Query: 513 YA-----DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
Y DP R G +SD +S G+ + +L TGR P
Sbjct: 191 YMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 43/313 (13%)
Query: 320 IGLVEDLPESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGR-----TVAIKMLY 374
+G+ ++L E E D+ F+ +G+G FG V + ++ VA+KML
Sbjct: 5 LGISDELKEKLE----DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 375 SHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLGACPEAWS--------LVYEYLPNGSLQD 424
+ + EF +E + + HPH+ L+G + + ++ ++ +G L
Sbjct: 61 ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA 120
Query: 425 RLFRK---SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 481
L N L + R +IA G+ +L S +H DL +N +L +++
Sbjct: 121 FLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177
Query: 482 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 541
+ DFG+ R + Y + A K + E + T SD ++FG+ + +++
Sbjct: 178 VADFGLSRKIYSGDYY----RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
Query: 542 T-GRLPVGLAGEVRRAVSCGKLSSILDPLAGD---WPTFVARRLVDLGLQCCELYGRERP 597
T G+ P + ++ + L + G+ P + DL QC ++RP
Sbjct: 234 TRGQTPYA-------GIENAEIYNYL--IGGNRLKQPPECMEEVYDLMYQCWSADPKQRP 284
Query: 598 DITPSLVKELEQL 610
T L ELE +
Sbjct: 285 SFT-CLRMELENI 296
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH-------PHL 399
++G+G +G V K + G+ A+K ++ + Q++ R+L L P
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVK-----RIRATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 400 VTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKD-RARIAAEIASGLCFL 454
VT GA + W + L + SL D+ +++ + + +D +IA I L L
Sbjct: 96 VTFYGALFREGDVW--ICXELXDTSL-DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 152
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYA 514
HS ++H D+KP N+L+++ K CDFGI + +D P +
Sbjct: 153 HSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV--AKDIDAGCKPYXAPERI 208
Query: 515 DPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 574
+PE ++ G + KSD +S G+ ++L R P G +L +++ + P
Sbjct: 209 NPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQLP 262
Query: 575 T--FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF 621
F A VD QC + +ERP LH ++ V SF
Sbjct: 263 ADKFSA-EFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVASF 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +QG+ +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 189
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +QG+ +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 401 TLLGACPEA--------WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 189
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 384 FQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA 441
++E+ + L H ++V G E L EY G L DR+ + D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQ 107
Query: 442 RIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 501
R ++ +G+ +LH I H D+KP+N+LLD + KI DFG+ T++ +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNN 158
Query: 502 HRSTAPK--GSFPYADPE-YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
K G+ PY PE R D +S G+++ +L G LP
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKML-YSHNMQGQLE-FQQEVRVLSKLQHPHLVTLLGACP 407
+G+G FG VY G G VAI+++ + + QL+ F++EV + +H ++V +GAC
Sbjct: 41 IGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 408 EAWSL-VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGD 466
L + L G + R + + + K R +IA EI G+ +LH+ + I+H D
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-QIAQEIVKGMGYLHA---KGILHKD 155
Query: 467 LKPQNILLDSELSSKICDFGI 487
LK +N+ D+ I DFG+
Sbjct: 156 LKSKNVFYDNG-KVVITDFGL 175
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 343 NFSESFKV----GQGGFG--CVYKGEMLGRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ 395
N S F++ G+G +G C + G VAIK + + L +E+++L +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 396 HPHLVTLLGAC-PEAWSLVYE-YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
H +++T+ P+++ E Y+ +Q L R + L + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 493
LH S ++H DLKP N+L++S K+CDFG+ R++ E
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 343 NFSESFKV----GQGGFG--CVYKGEMLGRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ 395
N S F++ G+G +G C + G VAIK + + L +E+++L +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 396 HPHLVTLLGAC-PEAWSLVYE-YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
H +++T+ P+++ E Y+ +Q L R + L + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 493
LH S ++H DLKP N+L++S K+CDFG+ R++ E
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 345 SESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEF--QQEVRVLSKLQHPHLV 400
+ ++G+G FG V++ E G A+K + +LE +E+ + L P +V
Sbjct: 77 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIV 129
Query: 401 TLLGACPEA-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSK 458
L GA E W ++ L G +L ++ P +DRA + GL +LHS
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS-- 184
Query: 459 PEKIVHGDLKPQNILLDSELS-SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+I+HGD+K N+LL S+ S + +CDFG + D L P G+ + PE
Sbjct: 185 -RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP-GTETHMAPE 242
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
K D +S ++L +L G P
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 343 NFSESFKV----GQGGFG--CVYKGEMLGRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ 395
N S F++ G+G +G C + G VAIK + + L +E+++L +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 396 HPHLVTLLGAC-PEAWSLVYE-YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
H +++T+ P+++ E Y+ +Q L R + L + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 493
LH S ++H DLKP N+L++S K+CDFG+ R++ E
Sbjct: 128 LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 13 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 69
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L +H +++ + + P + Y+ ++ L++ L
Sbjct: 70 TLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 186 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 339 TATCNFSESFKVGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQ-QEVRVLSKLQ 395
+++ F + K+G G + VYKG + G VA+K + + +G +E+ ++ +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 396 HPHLVTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSP--LLWKDRARIAAEIASGL 451
H ++V L +LV+E++ N + R +P L ++ GL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 452 CFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
F H +K I+H DLKPQN+L++ K+ DFG+ R
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 31 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 87
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + YL + L++ L
Sbjct: 88 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 204 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEF--QQEVRVLSKLQHPHLVTLLG 404
+VG+G FG V+ K + G A+K + +LE +E+ + L P +V L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYG 133
Query: 405 ACPEA-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSKPEKI 462
A E W ++ L G +L ++ P +DRA + GL +LH+ +I
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRI 187
Query: 463 VHGDLKPQNILLDSELS-SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+HGD+K N+LL S+ S + +CDFG + D L P G+ + PE
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVMG 246
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
K D +S ++L +L G P
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 412 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 471
LV+E + GS+ + ++ + + L + + + ++AS L FLH+ + I H DLKP+N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNEL---EASVVVQDVASALDFLHN---KGIAHRDLKPEN 141
Query: 472 ILLD--SELSS-KICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEY-----HRTG 522
IL + +++S KICDFG+ + + P S P GS Y PE
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP-VGLAG 551
+ + D +S G+I+ LL+G P VG G
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEF--QQEVRVLSKLQHPHLVTLLG 404
+VG+G FG V+ K + G A+K + +LE +E+ + L P +V L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYG 117
Query: 405 ACPEA-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSKPEKI 462
A E W ++ L G +L ++ P +DRA + GL +LH+ +I
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRI 171
Query: 463 VHGDLKPQNILLDSELS-SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+HGD+K N+LL S+ S + +CDFG + D L P G+ + PE
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVMG 230
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
K D +S ++L +L G P
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G G FG V K G A+K+L + E + E R+L + P LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 405 ACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
+ + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD--- 161
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+++ DLKP+N+++D + ++ DFG+ + V T L G+ Y PE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---------GTPEYLAPEIILS 212
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
D ++ G++I ++ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 345 SESFKVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEF--QQEVRVLSKLQHPHLV 400
+ ++G+G FG V++ E G A+K + +LE +E+ + L P +V
Sbjct: 96 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIV 148
Query: 401 TLLGACPEA-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSK 458
L GA E W ++ L G +L ++ P +DRA + GL +LHS
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS-- 203
Query: 459 PEKIVHGDLKPQNILLDSELS-SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPE 517
+I+HGD+K N+LL S+ S + +CDFG + D L P G+ + PE
Sbjct: 204 -RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP-GTETHMAPE 261
Query: 518 YHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
K D +S ++L +L G P
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +QG+ +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 91
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R S + AR AA+I +LHS
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 147
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 148 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---------GTPEYLAPEI 195
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+ + P LV
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRIQQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + K+ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG VYK + +V A K++ + + + ++ E+ +L+ HP++V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 407 ---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
W L+ E+ G++ + PL + + L +LH +K I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNK---II 157
Query: 464 HGDLKPQNILLDSELSSKICDFGI 487
H DLK NIL + K+ DFG+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV 181
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG VYK + +V A K++ + + + ++ E+ +L+ HP++V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 407 ---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
W L+ E+ G++ + PL + + L +LH +K I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNK---II 157
Query: 464 HGDLKPQNILLDSELSSKICDFGI 487
H DLK NIL + K+ DFG+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV 181
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R + AR AA+I +LHS
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 154
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 155 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 202
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 349 KVGQGGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
++G G FG VYK + +V A K++ + + + ++ E+ +L+ HP++V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 407 ---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
W L+ E+ G++ + PL + + L +LH +K I+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNK---II 157
Query: 464 HGDLKPQNILLDSELSSKICDFGI 487
H DLK NIL + K+ DFG+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV 181
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLG----- 404
VG+G +G V++G G VA+K+ S + + + E+ L+H +++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 74
Query: 405 --ACPEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFLH----- 455
+ + W L+ Y GSL D +L VS L RI IASGL LH
Sbjct: 75 RHSSTQLW-LITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFG 127
Query: 456 -SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK-GSFPY 513
KP I H DLK +NIL+ I D G+ + ++ T L P+ G+ Y
Sbjct: 128 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV---GNNPRVGTKRY 183
Query: 514 ADPEYHRTGVLTPKSDSY------SFGLIILQL 540
PE + DSY +FGL++ ++
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 13 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 69
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L +H +++ + + P + Y+ ++ L++ L
Sbjct: 70 TLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KICDFG+ R+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 186 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLG----- 404
VG+G +G V++G G VA+K+ S + + + E+ L+H +++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 74
Query: 405 --ACPEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFLH----- 455
+ + W L+ Y GSL D +L VS L RI IASGL LH
Sbjct: 75 RHSSTQLW-LITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFG 127
Query: 456 -SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK-GSFPY 513
KP I H DLK +NIL+ I D G+ + ++ T L P+ G+ Y
Sbjct: 128 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV---GNNPRVGTKRY 183
Query: 514 ADPEYHRTGVLTPKSDSY------SFGLIILQL 540
PE + DSY +FGL++ ++
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 350 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGAC 406
+G+G + V L G+ A+K++ + +EV L + Q + +++ L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 407 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ + LV+E L GS+ + ++ + + ++ +R+ ++A+ L FLH+ + I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNE---REASRVVRDVAAALDFLHT---KGIAH 134
Query: 465 GDLKPQNILLDS-ELSS--KICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEY-- 518
DLKP+NIL +S E S KICDF + + + P + T P GS Y PE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 519 ---HRTGVLTPKSDSYSFGLIILQLLTGRLP-VGLAG 551
+ + D +S G+++ +L+G P VG G
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCG 231
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 349 KVGQGGFGCVYKG--EMLGRTVAIKMLYS---HNMQGQLEFQQEVRVLSKLQ-HPHLVTL 402
K+G+G +G V+K G VA+K ++ ++ Q F+ E+ +L++L H ++V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNL 74
Query: 403 LGAC----PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 458
L LV++Y+ + R + + P+ + + ++ + +LHS
Sbjct: 75 LNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPV---HKQYVVYQLIKVIKYLHSGG 129
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
++H D+KP NILL++E K+ DFG+ R
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I Q+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 350 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLG----- 404
VG+G +G V++G G VA+K+ S + + + E+ L+H +++ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 103
Query: 405 --ACPEAWSLVYEYLPNGSLQD--RLFRKSNVSPLLWKDRARIAAEIASGLCFLH----- 455
+ + W L+ Y GSL D +L VS L RI IASGL LH
Sbjct: 104 RHSSTQLW-LITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFG 156
Query: 456 -SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK-GSFPY 513
KP I H DLK +NIL+ I D G+ + ++ T L P+ G+ Y
Sbjct: 157 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV---GNNPRVGTKRY 212
Query: 514 ADPEYHRTGVLTPKSDSY------SFGLIILQL 540
PE + DSY +FGL++ ++
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHS 456
A SL VY +L L + + + L D + + +I GL ++HS
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-----LTDDHVQFLIYQILRGLKYIHS 143
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 144 AD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM-- 198
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 199 HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLG 404
K+GQG FG V+K G+ VA+K + N + +E+++L L+H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 405 ACPEAWS----------LVYEYLPN--GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
C S LV+++ + L + K +S + R+ + +GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-----KRVMQMLLNGLY 139
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
++H +K I+H D+K N+L+ + K+ DFG+ R
Sbjct: 140 YIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 337 LQTATCNFSESFKV----GQGGFG----CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEV 388
L + F++ ++V G G + C++K + A+K++ + + + +E+
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNM--EFAVKII----DKSKRDPTEEI 66
Query: 389 RVLSKL-QHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
+L + QHP+++TL + +V E + G L D++ R+ S ++ + +
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE---REASAVLF 123
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL----SSKICDFGICR-LVTEDTLYLPS 500
I + +LH+ + +VH DLKP NIL E S +ICDFG + L E+ L +
Sbjct: 124 TITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM-- 178
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + + PE D +S G+++ +LTG P
Sbjct: 179 -----TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 201 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKG 253
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 199 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKG 251
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 136
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 193
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 194 M--HYNQT------VDIWSVGCIMAELLTGR 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 208 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKG 260
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 505
++A G+ FL S K +H DL +NILL + KICDFG+ R + +D P + R
Sbjct: 206 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----PDYVRKG 258
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ + PE V T +SD +SFG+++ ++ +
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 405 ACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
A SL YL + L + L + +I GL ++HS+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD--- 141
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ + Y++T
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM--HYNQT 199
Query: 522 GVLTPKSDSYSFGLIILQLLTGR 544
D +S G I+ +LLTGR
Sbjct: 200 ------VDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 150
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 151 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 207
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 208 M--HYNQT------VDIWSVGCIMAELLTGR 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 146
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 204 M--HYNQT------VDIWSVGCIMAELLTGR 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 340 ATCN-FSESFKV----GQGGFG----CVYKG---EMLGRTVAIKMLYSHNMQGQLEFQQE 387
ATC F++ +++ G+G F CV K E + + K L + + Q + ++E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLERE 80
Query: 388 VRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
R+ L+HP++V L + E LV++ + G L + + + S D +
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHCIH 137
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLVTEDTLYLPSFH 502
+I + +H IVH DLKP+N+LL S+ + K+ DFG+ V + F
Sbjct: 138 QILESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF- 193
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE R D ++ G+I+ LL G P
Sbjct: 194 -----AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 349 KVGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEF--QQEVRVLSKLQHPHLVTLLG 404
++G+G FG V+ K + G A+K + +LE +E+ + L P +V L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYG 131
Query: 405 ACPEA-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLHSSKPEKI 462
A E W ++ L G +L ++ P +DRA + GL +LH+ +I
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRI 185
Query: 463 VHGDLKPQNILLDSELS-SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
+HGD+K N+LL S+ S + +CDFG + D L P G+ + PE
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVMG 244
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
K D +S ++L +L G P
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 434 PLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 493
P+ +D + ++A G+ FL S K +H DL +NILL KICDFG+ R + +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 494 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ P + R + + PE + + KSD +S+G+++ ++ +
Sbjct: 252 N----PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+P G + L R + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 160
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 161 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNW 217
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 218 M--HYNQT------VDIWSVGCIMAELLTGR 240
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 343 NFSESFKVGQGGFGCVYKG--EMLGRTVAIKML--YSHNMQGQLEFQQEVRVLSKLQHPH 398
N+ +G+G +G VY + + VAIK + ++ +E+ +L++L+ +
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 399 LVTLLG-ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR--ARIAAEIASGLCFLH 455
++ L PE E + D +K +P+ ++ I + G F+H
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 456 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 494
S I+H DLKP N LL+ + S KICDFG+ R + D
Sbjct: 149 ESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 386 QEVRVLSKL-QHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+E+ +L + QHP+++TL + LV E + G L D++ R+ S ++ +
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE---REASF 125
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS----KICDFGICR-LVTEDTLY 497
+ I + +LHS + +VH DLKP NIL E + +ICDFG + L E+ L
Sbjct: 126 VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ P + + PE + D +S G+++ +L G P
Sbjct: 183 M-------TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 159
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 160 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 216
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 217 M--HYNQT------VDIWSVGCIMAELLTGR 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 160
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 161 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 217
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 218 M--HYNQT------VDIWSVGCIMAELLTGR 240
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---------XGTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLE---FQQEVRVLSKLQHPHLVTLLG 404
+G+G FG V K + + A+K+L M + E F++E VL + TL
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 405 ACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
A + LV +Y G L L + + P ++ AR +A + + S
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP---EEMARFY--LAEMVIAIDSVHQLHY 196
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT- 521
VH D+KP NIL+D ++ DFG C + ED +S+ G+ Y PE +
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----QSSVAVGTPDYISPEILQAM 251
Query: 522 ----GVLTPKSDSYSFGLIILQLLTGRLP 546
G P+ D +S G+ + ++L G P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 147
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 205 M--HYNQT------VDIWSVGCIMAELLTGR 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLG 404
K+GQG FG V+K G+ VA+K + N + +E+++L L+H ++V L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 405 ACPEAWS----------LVYEYLPN--GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
C S LV+++ + L + K +S + R+ + +GL
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-----KRVMQMLLNGLY 138
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
++H +K I+H D+K N+L+ + K+ DFG+ R
Sbjct: 139 YIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 136
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 193
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 194 M--HYNQT------VDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 145
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 203 M--HYNQT------VDIWSVGCIMAELLTGR 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 162
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 217
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 218 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 248
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHS 456
A SL VY +L L + + + L D + + +I GL ++HS
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-----LTDDHVQFLIYQILRGLKYIHS 143
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM-- 198
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 199 HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 147
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 205 M--HYNQT------VDIWSVGCIMAELLTGR 227
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLE---FQQEVRVLSKLQHPHLVTLLG 404
+G+G FG V K + R A+K+L M + E F++E VL + L
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 405 ACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
A + LV +Y G L L + + P +D AR I + + S
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---EDMARFY--IGEMVLAIDSIHQLHY 196
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT- 521
VH D+KP N+LLD ++ DFG C + +D +S+ G+ Y PE +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSVAVGTPDYISPEILQAM 251
Query: 522 ----GVLTPKSDSYSFGLIILQLLTGRLP 546
G P+ D +S G+ + ++L G P
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 333 SLADLQTATCNFSESFKV----GQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQ--LEF 384
S DL T F +++ G+G F V + + G+ A K++ + + + +
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 385 QQEVRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
++E R+ L+HP++V L + E L+++ + G L + + + S D +
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE---ADASH 125
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLVTEDTLYLP 499
+I + H +VH DLKP+N+LL S+L + K+ DFG+ V +
Sbjct: 126 CIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF 182
Query: 500 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
F G+ Y PE R D ++ G+I+ LL G P
Sbjct: 183 GF------AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 386 QEVRVLSKL-QHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+E+ +L + QHP+++TL + LV E + G L D++ R+ S ++ +
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE---REASF 125
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS----KICDFGICR-LVTEDTLY 497
+ I + +LHS + +VH DLKP NIL E + +ICDFG + L E+ L
Sbjct: 126 VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 498 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ P + + PE + D +S G+++ +L G P
Sbjct: 183 M-------TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 147
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 205 M--HYNQT------VDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 151
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 152 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 208
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 209 M--HYNQT------VDIWSVGCIMAELLTGR 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 168
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 223
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 224 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLG 404
K+GQG FG V+K G+ VA+K + N + +E+++L L+H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 405 ACPEAWS----------LVYEYLPN--GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
C S LV+++ + L + K +S + R+ + +GL
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI-----KRVMQMLLNGLY 139
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
++H +K I+H D+K N+L+ + K+ DFG+ R
Sbjct: 140 YIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 350 VGQGGFGCVYKG-EMLGRT-VAIKML--YSHNMQGQLEFQQEVRVLSKLQHPHLV----T 401
+G+G +G V + + +T VAIK + + H Q + E+++L + +H +++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIRDI 109
Query: 402 LLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
L + EA VY + ++ L++ L +I GL ++HS+
Sbjct: 110 LRASTLEAMRDVY--IVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
++H DLKP N+L+++ KICDFG+ R+ ADPE+ T
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARI-----------------------ADPEHDHT 201
Query: 522 GVLT 525
G LT
Sbjct: 202 GFLT 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 349 KVGQGGFGCVYKGE--MLGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLG 404
K+GQG FG V+K G+ VA+K + N + +E+++L L+H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 405 ACPEAWS----------LVYEYLPN--GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLC 452
C S LV+++ + L + K +S + R+ + +GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-----KRVMQMLLNGLY 139
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 489
++H +K I+H D+K N+L+ + K+ DFG+ R
Sbjct: 140 YIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 163
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 164 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNW 220
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 221 M--HYNQT------VDIWSVGCIMAELLTGR 243
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLE---FQQEVRVLSKLQHPHLVTLLG 404
+G+G FG V K + R A+K+L M + E F++E VL + L
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 405 ACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
A + LV +Y G L L + + P +D AR I + + S
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---EDMARFY--IGEMVLAIDSIHQLHY 212
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT- 521
VH D+KP N+LLD ++ DFG C + +D +S+ G+ Y PE +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSVAVGTPDYISPEILQAM 267
Query: 522 ----GVLTPKSDSYSFGLIILQLLTGRLP 546
G P+ D +S G+ + ++L G P
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 139
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 194
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 195 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 142
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 200 M--HYNQT------VDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 147
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 204
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 205 M--HYNQT------VDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 401 TL---LGACPEAWSLVY-----EYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +VY +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 152
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 210 M--HYNQT------VDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 152
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 210 M--HYNQT------VDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 151
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 152 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 208
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 209 M--HYNQT------VDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 142
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 200 M--HYNQT------VDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 146
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 204 M--HYNQT------VDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 137
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 138 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 195 M--HYNQT------VDIWSVGCIMAELLTGR 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 170
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 225
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 226 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV--KLYMYQLFRS 147
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 202
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 203 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 145
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 203 M--HYNQT------VDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 146
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 204 M--HYNQT------VDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 137
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 138 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 195 M--HYNQT------VDIWSVGCIMAELLTGR 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 213
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 268
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 269 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 299
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 152
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 210 M--HYNQT------VDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 145
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 203 M--HYNQT------VDIWSVGCIMAELLTGR 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 172
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 227
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 228 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 258
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 139
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 140 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 196
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 197 M--HYNQT------VDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 142
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 200 M--HYNQT------VDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 159
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 160 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 216
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 217 M--HYNQT------VDIWSVGCIMAELLTGR 239
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 136
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 193
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 194 M--HYNQT------VDIWSVGCIMAELLTGR 216
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 145
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 203 M--HYNQT------VDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 405 ACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
A SL YL + L L + +I GL ++HS+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--- 165
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ + Y++T
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM--HYNQT 223
Query: 522 GVLTPKSDSYSFGLIILQLLTGR 544
D +S G I+ +LLTGR
Sbjct: 224 ------VDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 163
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 164 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 220
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 221 M--HYNQT------VDIWSVGCIMAELLTGR 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 38/212 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R T+D + T + Y
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM--------TGYVATRWY 188
Query: 514 ADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
PE + ++ D +S G I+ +LLTGR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 142
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 200 M--HYNQT------VDIWSVGCIMAELLTGR 222
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 168
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 202
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 138
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 139 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 195
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 196 M--HYNQT------VDIWSVGCIMAELLTGR 218
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 401 TLLGACPEA--------WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTE---DTLYLPS-FHRST 505
L ++HS I H D+KPQN+LLD + + K+CDFG + + + Y+ S ++R
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR-- 189
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
AP+ F D T D +S G ++ +LL G+
Sbjct: 190 APELIFGATD--------YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 146
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 204 M--HYNQT------VDIWSVGCIMAELLTGR 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 327 PESAEFSLADLQTATCNFSESFKVGQGGFG--CVYKGEMLGRTVAIKML--YSHNMQGQL 382
PE + D+ N S +G+G +G C + VAIK + + H Q
Sbjct: 11 PEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR 67
Query: 383 EFQQEVRVLSKLQHPHLVTL--LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 440
+ E+++L + +H +++ + + P + Y+ ++ L++ L
Sbjct: 68 TLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 441 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 500
+I GL ++HS+ ++H DLKP N+LL++ KI DFG+ R+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 501 FHRSTAPKGSFPYADPEYHRTGVLTPKS-DSYSFGLIILQLLTGR 544
A + Y PE KS D +S G I+ ++L+ R
Sbjct: 184 LTEYVATRW---YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV--KLYMYQLFRS 142
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 176
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV--KLYMYQLFRS 153
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 187
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 146
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 180
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLG 404
++G+G F V + + G+ A K++ + + + + ++E R+ L+HP++V L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 405 ACPEAW--SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ E LV++ + G L + + + S D + +I + H + I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHCIQQILESVNHCHLNG---I 124
Query: 463 VHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
VH DLKP+N+LL S+ + K+ DFG+ V D F G+ Y PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF------AGTPGYLSPEVL 178
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D ++ G+I+ LL G P
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV--KLYMYQLFRS 146
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 180
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + ++ VA+K + Q+E+ L+HP++V +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYI-ERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P +++ EY G L +R+ S +D AR ++ SG+ + HS + I H
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFS----EDEARFFFQQLLSGVSYCHSMQ---ICH 139
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY-HRT 521
DLK +N LLD + KICDFG + + L S +ST G+ Y PE R
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTV--GTPAYIAPEVLLRQ 192
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+D +S G+ + +L G P
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 401 TLLGACPEA--------WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 92
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 148
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 149 ---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 196
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 401 TLLGACPEA--------WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + +LV +Y+P + R P+++ ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 134
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 412 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 471
LV+E + GS+ + ++ + + L + + + ++AS L FLH+ + I H DLKP+N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNEL---EASVVVQDVASALDFLHN---KGIAHRDLKPEN 141
Query: 472 ILLD--SELSS-KICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEY-----HRTG 522
IL + +++S KICDF + + + P S P GS Y PE
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 523 VLTPKSDSYSFGLIILQLLTGRLP-VGLAG 551
+ + D +S G+I+ LL+G P VG G
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 401 TLLGACPEA--------WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + +LV +Y+P + R P+++ ++
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 135
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 169
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 368 VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLV---TLLGACPEAWSLVYEYLPNGSLQ 423
VAIK + Q + E +E++ +S+ HP++V T E W LV + L GS+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVL 101
Query: 424 DRL----FRKSNVSPLLWKDRARIAA---EIASGLCFLHSSKPEKIVHGDLKPQNILLDS 476
D + + + S +L D + IA E+ GL +LH + +H D+K NILL
Sbjct: 102 DIIKHIVAKGEHKSGVL--DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 156
Query: 477 ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY-HRTGVLTPKSDSYSFGL 535
+ S +I DFG+ + + R T G+ + PE + K+D +SFG+
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 536 IILQLLTGRLP 546
++L TG P
Sbjct: 216 TAIELATGAAP 226
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 182
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 183 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---------GTPEYLAPEI 230
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 343 NFSESFKVGQGGFGCVY-----KGEMLGRTVAIKMLYSHNMQGQLEFQQEVR----VLSK 393
NF +G G +G V+ G G+ A+K+L + + + + R VL
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 394 L-QHPHLVTLLGA--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
+ Q P LVTL A L+ +Y+ G L L ++ + + EI
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE---HEVQIYVGEIVLA 171
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR-LVTEDTLYLPSFHRSTAPKG 509
L LH I++ D+K +NILLDS + DFG+ + V ++T R+ G
Sbjct: 172 LEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET------ERAYDFCG 222
Query: 510 SFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
+ Y P+ R G D +S G+++ +LLTG P + GE
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 337 LQTATCN-FSESFKV----GQGGFGCVYK--GEMLGRTVAIKMLYSHNMQGQ--LEFQQE 387
+ T TC F+E +++ G+G F V + + G+ A ++ + + + + ++E
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60
Query: 388 VRVLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 445
R+ L+HP++V L + E L+++ + G L + + + S D +
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE---ADASHCIQ 117
Query: 446 EIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLVTEDTLYLPSFH 502
+I + H +VH +LKP+N+LL S+L + K+ DFG+ V + F
Sbjct: 118 QILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF- 173
Query: 503 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE R D ++ G+I+ LL G P
Sbjct: 174 -----AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 343 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLV 400
+++++ +G G FG VY+ ++ G VAIK + +Q + +E++++ KL H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 401 TL---LGACPEA-----WSLVYEYLPNG--SLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
L + E +LV +Y+P + R P+++ ++
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL--YMYQLFRS 138
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFG 486
L ++HS I H D+KPQN+LLD + + K+CDFG
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 172
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLG 404
++G+G F V + + G+ A K++ + + + + ++E R+ L+HP++V L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 405 ACPEAW--SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
+ E LV++ + G L + + + S D + +I + H + I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHCIQQILESVNHCHLNG---I 124
Query: 463 VHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
VH DLKP+N+LL S+ + K+ DFG+ V D F G+ Y PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF------AGTPGYLSPEVL 178
Query: 520 RTGVLTPKSDSYSFGLIILQLLTGRLP 546
R D ++ G+I+ LL G P
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 343 NFSESFK--------VGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK 393
NF +S K +G G G V++G GR VA+K + L E+++L++
Sbjct: 26 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTE 82
Query: 394 LQ-HPHLVTLLGACPEA---WSLVYEYLPNGSLQDRLFRKSNVSP---LLWKDRARIAA- 445
HP+++ C E + + L N +LQD L NVS L K+ I+
Sbjct: 83 SDDHPNVIRYY--CSETTDRFLYIALELCNLNLQD-LVESKNVSDENLKLQKEYNPISLL 139
Query: 446 -EIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------------ELSSKICDFGICRLV 491
+IASG+ LHS K I+H DLKPQNIL+ + L I DFG+C+ +
Sbjct: 140 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 492 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV---LTPKSDSYSFGLIILQLLT-GRLPV 547
D+ P G+ + PE LT D +S G + +L+ G+ P
Sbjct: 197 --DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 548 G 548
G
Sbjct: 255 G 255
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI D+G+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K G A+K+L + Q ++ +Q E R+L + P L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY P G + L R + AR AA+I +LHS
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+++D + K+ DFG + V T L G+ Y PE
Sbjct: 163 ---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 210
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 343 NFSESFK--------VGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK 393
NF +S K +G G G V++G GR VA+K + L E+++L++
Sbjct: 26 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTE 82
Query: 394 LQ-HPHLVTLLGACPEA---WSLVYEYLPNGSLQDRLFRKSNVSP---LLWKDRARIAA- 445
HP+++ C E + + L N +LQD L NVS L K+ I+
Sbjct: 83 SDDHPNVIRYY--CSETTDRFLYIALELCNLNLQD-LVESKNVSDENLKLQKEYNPISLL 139
Query: 446 -EIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------------ELSSKICDFGICRLV 491
+IASG+ LHS K I+H DLKPQNIL+ + L I DFG+C+ +
Sbjct: 140 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 492 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV---LTPKSDSYSFGLIILQLLT-GRLPV 547
D+ P G+ + PE LT D +S G + +L+ G+ P
Sbjct: 197 --DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 548 G 548
G
Sbjct: 255 G 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 368 VAIKMLYSHNMQGQL-EFQQEVRVLSKLQHPHLVTLLGAC---PEAWSLVYEYLPNGSLQ 423
VAIK + Q + E +E++ +S+ HP++V+ + E W LV + L GS+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVL 96
Query: 424 DRL----FRKSNVSPLLWKDRARIAA---EIASGLCFLHSSKPEKIVHGDLKPQNILLDS 476
D + + + S +L D + IA E+ GL +LH + +H D+K NILL
Sbjct: 97 DIIKHIVAKGEHKSGVL--DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 151
Query: 477 ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY-HRTGVLTPKSDSYSFGL 535
+ S +I DFG+ + + R T G+ + PE + K+D +SFG+
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 536 IILQLLTGRLP 546
++L TG P
Sbjct: 211 TAIELATGAAP 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G+GGFG V+ +M G+ A K L ++ + +Q E ++L+K+ +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A LV + G ++ ++ +P + RA A+I SGL LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 462 IVHGDLKPQNILLDSELSSKICDFGIC-RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+N+LLD + + +I D G+ L T ++ G+ + PE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------KTKGYAGTPGFMAPELLL 362
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
D ++ G+ + +++ R P GE
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 40/213 (18%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L PEY
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC--------------GTPEY 204
Query: 519 HRTGVLTPKS-----DSYSFGLIILQLLTGRLP 546
++ K D ++ G++I ++ G P
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G+GGFG V+ +M G+ A K L ++ + +Q E ++L+K+ +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A LV + G ++ ++ +P + RA A+I SGL LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 462 IVHGDLKPQNILLDSELSSKICDFGIC-RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+N+LLD + + +I D G+ L T ++ G+ + PE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------KTKGYAGTPGFMAPELLL 362
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
D ++ G+ + +++ R P GE
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G+GGFG V+ +M G+ A K L ++ + +Q E ++L+K+ +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A LV + G ++ ++ +P + RA A+I SGL LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 462 IVHGDLKPQNILLDSELSSKICDFGIC-RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+N+LLD + + +I D G+ L T ++ G+ + PE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------KTKGYAGTPGFMAPELLL 362
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
D ++ G+ + +++ R P GE
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 350 VGQGGFGCVYKGEM-----LGRTVAIK-MLYSHNMQGQLE-FQQEVRVLSKLQHPHLVTL 402
+G+G FG V +G + VA+K M ++ Q ++E F E + HP+++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 403 LGACPEAWS-------LVYEYLPNGSLQDR-LFRKSNVSP--LLWKDRARIAAEIASGLC 452
LG C E S ++ ++ G L L+ + P + + + +IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 453 FLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP 512
+L + +H DL +N +L +++ + DFG+ + + Y + K
Sbjct: 162 YLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY----RQGRIAKMPVK 214
Query: 513 YADPEYHRTGVLTPKSDSYSFGLIILQLLT 542
+ E V T KSD ++FG+ + ++ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 349 KVGQGGFGCVYKGEM-LGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLGA 405
K+G+G +G VYK + G T A+K + + +E+ +L +L+H ++V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 C--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+ LV+E+L + + + + K ++ +G+ + H +++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD---RRVL 122
Query: 464 HGDLKPQNILLDSELSSKICDFGICR 489
H DLKPQN+L++ E KI DFG+ R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 349 KVGQGGFGCVYKGEM-LGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLGA 405
K+G+G +G VYK + G T A+K + + +E+ +L +L+H ++V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 C--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+ LV+E+L + + + + K ++ +G+ + H +++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD---RRVL 122
Query: 464 HGDLKPQNILLDSELSSKICDFGICR 489
H DLKPQN+L++ E KI DFG+ R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 349 KVGQGGFGCVYKGEM-LGRTVAIKMLYSHNMQGQLEFQ--QEVRVLSKLQHPHLVTLLGA 405
K+G+G +G VYK + G T A+K + + +E+ +L +L+H ++V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 C--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
+ LV+E+L + + + + K ++ +G+ + H +++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHD---RRVL 122
Query: 464 HGDLKPQNILLDSELSSKICDFGICR 489
H DLKPQN+L++ E KI DFG+ R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 350 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G V + G +A+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 405 ACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
A SL YL + L L + +I GL ++HS+
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--- 174
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H DLKP N+ ++ + KI DFG+ R ++ + AP+ + Y+ T
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM--HYNMT 232
Query: 522 GVLTPKSDSYSFGLIILQLLTGR 544
D +S G I+ +LLTGR
Sbjct: 233 ------VDIWSVGCIMAELLTGR 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 350 VGQGGFGCVYK--GEMLGRTVAIKML-----YSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+G F V + G+ A+K++ S + ++E + L+HPH+V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 403 LGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRA-RIAAEIASGLCFLH 455
L E +S +V+E++ L + ++++ + + A +I L + H
Sbjct: 92 L----ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 456 SSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAPKGSFP 512
+ I+H D+KP+N+LL S+ +S K+ DFG+ + E L + G+
Sbjct: 148 DNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV------AGGRVGTPH 198
Query: 513 YADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ PE + D + G+I+ LL+G LP
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 353 GGFGCVYKGEMLGRTV--AIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC---P 407
G FG VYK + +V A K++ + + + ++ E+ +L+ HP++V LL A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDL 467
W L+ E+ G++ + PL + + L +LH +K I+H DL
Sbjct: 81 NLWILI-EFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNK---IIHRDL 134
Query: 468 KPQNILLDSELSSKICDFGI 487
K NIL + K+ DFG+
Sbjct: 135 KAGNILFTLDGDIKLADFGV 154
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 350 VGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
+G+GGFG V+ +M G+ A K L ++ + +Q E ++L+K+ +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 405 A--CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSKPEK 461
A LV + G ++ ++ +P + RA A+I SGL LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 462 IVHGDLKPQNILLDSELSSKICDFGIC-RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
I++ DLKP+N+LLD + + +I D G+ L T ++ G+ + PE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------KTKGYAGTPGFMAPELLL 362
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 552
D ++ G+ + +++ R P GE
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 349 KVGQGGFGCVYKGEMLGRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGAC 406
K+ + G ++KG G + +K+L + + +F +E L HP+++ +LGAC
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 407 --PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
P A +L+ + P GSL + L +N + + A + A G FLH+ +P
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFV-VDQSQAVKFALDXARGXAFLHTLEPLIP 135
Query: 463 VHGDLKPQNILLDSELSSKICDFGI-CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
H L +++ +D + +++I + + Y P++ AP+ + R+
Sbjct: 136 RHA-LNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAW---VAPEALQKKPEDTNRRS 191
Query: 522 GVLTPKSDSYSFGLIILQLLTGRLP 546
+D +SF +++ +L+T +P
Sbjct: 192 ------ADXWSFAVLLWELVTREVP 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 120 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 495 TLY-----LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L P++ AP+ Y+R D +S G+I+ L+G P
Sbjct: 171 SLMRTLCGTPTY---LAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 100
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + AR AA+I +LHS
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 156
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 157 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 204
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 349 KVGQGGFGCVYKGEM--LGRTVAIK-MLYSHNMQGQLEFQQEVRVLSKLQH-PHLVTLLG 404
++G G G V+K G +A+K M S N + ++ V+ K P++V G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 464
+ G+ ++L +K P+ + ++ I L +L ++H
Sbjct: 92 TFITNTDVFIAMELMGTCAEKL-KKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIH 148
Query: 465 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL 524
D+KP NILLD K+CDFGI + +D + RS G Y PE R
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDK----AKDRSA---GCAAYMAPE--RIDPP 199
Query: 525 TP-------KSDSYSFGLIILQLLTGRLP 546
P ++D +S G+ +++L TG+ P
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 120 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 495 TLY-----LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L P++ AP+ Y+R D +S G+I+ L+G P
Sbjct: 171 SLMRTLCGTPTY---LAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 126 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 495 TLY-----LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L P++ AP+ Y+R D +S G+I+ L+G P
Sbjct: 177 SLMRTLCGTPTY---LAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 59 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 119 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 495 TLY-----LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L P++ AP+ Y+R D +S G+I+ L+G P
Sbjct: 170 SLMRTLCGTPTY---LAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 120 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 495 TLY--LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L L AP+ Y+R D +S G+I+ L+G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 350 VGQGGFGCVYKGEMLGRT---VAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLL 403
VG G +G V + GRT VAIK LY Q +L +E+R+L ++H +++ LL
Sbjct: 33 VGSGAYGAVCSA-VDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 404 GACPEAWSLVYEYLPNGSLQDRL-------FRKSNVSPL-----LWKDRAR-IAAEIASG 450
+ P+ +L D F +++ L L +DR + + ++ G
Sbjct: 91 DV----------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS 510
L ++H++ I+H DLKP N+ ++ + KI DFG+ R + AP+
Sbjct: 141 LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVI 197
Query: 511 FPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
+ Y +T D +S G I+ +++TG+
Sbjct: 198 LNWM--RYTQT------VDIWSVGCIMAEMITGK 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R + AR AA+I +LHS
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX----EPHARFYAAQIVLTFEYLHSLD 182
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L G+ Y PE
Sbjct: 183 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEI 230
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI DF + R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 39/212 (18%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLG 404
VG G +G C + G VAIK L S Q ++ +E+ +L +QH +++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 405 ACPEAWSL--VYE-YLPNGSLQDRL-------FRKSNVSPLLWKDRARIAAEIASGLCFL 454
A SL Y+ YL +Q L F + + L++ ++ GL ++
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY--------QMLKGLKYI 142
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV-TEDTLYLPS-FHRSTAPKGSFP 512
HS+ +VH DLKP N+ ++ + KI DFG+ R E T Y+ + ++R AP+
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYR--APEVILS 197
Query: 513 YADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
+ Y++T D +S G I+ ++LTG+
Sbjct: 198 WM--HYNQT------VDIWSVGCIMAEMLTGK 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 52/246 (21%)
Query: 343 NFSESFK--------VGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK 393
NF +S K +G G G V++G GR VA+K + L E+++L++
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTE 64
Query: 394 LQ-HPHLVTLLGACPEA---WSLVYEYLPNGSLQDRLFRKSNVSP---LLWKDRARIAA- 445
HP+++ C E + + L N +LQD L NVS L K+ I+
Sbjct: 65 SDDHPNVIRY--YCSETTDRFLYIALELCNLNLQD-LVESKNVSDENLKLQKEYNPISLL 121
Query: 446 -EIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------------ELSSKICDFGICRLV 491
+IASG+ LHS K I+H DLKPQNIL+ + L I DFG+C+ +
Sbjct: 122 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 492 TEDTLYLPSFHRS-TAPKGSFPYADPE-------YHRTGVLTPKSDSYSFGLIILQLLT- 542
SF + P G+ + PE LT D +S G + +L+
Sbjct: 179 DSGQ---SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 543 GRLPVG 548
G+ P G
Sbjct: 236 GKHPFG 241
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 350 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLGA 405
+G+G F V + L G A K++ + + + + ++E R+ L+H ++V L +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 406 CPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 463
E LV++ + G L + + + S D + +I + H +V
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE---ADASHCIQQILEAVLHCHQMG---VV 125
Query: 464 HGDLKPQNILLDSEL---SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR 520
H DLKP+N+LL S+ + K+ DFG+ V D F G+ Y PE R
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF------AGTPGYLSPEVLR 179
Query: 521 TGVLTPKSDSYSFGLIILQLLTGRLP 546
D ++ G+I+ LL G P
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 386 QEVRVLSKL-QHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRAR 442
+E+ +L + QHP+++TL + +V E G L D++ R+ S ++ +
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE---REASA 120
Query: 443 IAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL----SSKICDFGICRLVTEDTLYL 498
+ I + +LH+ + +VH DLKP NIL E S +ICDFG + + + L
Sbjct: 121 VLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 499 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ P + + PE D +S G+++ LTG P
Sbjct: 178 XT------PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 39/212 (18%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLG 404
VG G +G C + G VAIK L S Q ++ +E+ +L +QH +++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 405 ACPEAWSL--VYE-YLPNGSLQDRL-------FRKSNVSPLLWKDRARIAAEIASGLCFL 454
A SL Y+ YL +Q L F + + L++ ++ GL ++
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY--------QMLKGLKYI 160
Query: 455 HSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV-TEDTLYLPS-FHRSTAPKGSFP 512
HS+ +VH DLKP N+ ++ + KI DFG+ R E T Y+ + ++R AP+
Sbjct: 161 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYR--APEVILS 215
Query: 513 YADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
+ Y++T D +S G I+ ++LTG+
Sbjct: 216 WM--HYNQT------VDIWSVGCIMAEMLTGK 239
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 350 VGQGGFGCVY--KGEMLGRTVAIKMLYSHNMQGQLEFQQ------EVRVLSKLQHPHLVT 401
+G G FG V K + G A+K+L + Q ++ +Q E R+L + P LV
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 402 LLGACPEAWSL--VYEYLPNGSLQDRLFRKSNVSPLLWKDRARI-AAEIASGLCFLHSSK 458
L + + +L V EY+ G + L R S + AR AA+I +LHS
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS----EPHARFYAAQIVLTFEYLHSLD 161
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
+++ DLKP+N+L+D + ++ DFG + V T L + A PE
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALA---------PEI 209
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ D ++ G++I ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 199 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 259 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 495 TLY--LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L L AP+ Y+R D +S G+I+ L+G P
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 357
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 382 LEFQQEVRVLSKLQHPHLVTLLGAC-PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLW 437
L + E+ +L KL HP ++ + E + +V E + G L D++ R + L+
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTED 494
+ +A + +LH + I+H DLKP+N+LL S+ KI DFG +++ E
Sbjct: 245 FYQMLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 495 TLY-----LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+L P++ AP+ Y+R D +S G+I+ L+G P
Sbjct: 296 SLMRTLCGTPTY---LAPEVLVSVGTAGYNRA------VDCWSLGVILFICLSGYPP 343
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 386 QEVRVLSKLQHPHLVTLLGACPEA----WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA 441
QE+ +L KL HP++V L+ + +V+E + G + + K L +D+A
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-----LSEDQA 139
Query: 442 RIA-AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 487
R ++ G+ +LH +KI+H D+KP N+L+ + KI DFG+
Sbjct: 140 RFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKML--YSHNMQGQLEFQQEVRVLSKLQHPHLVTLLG- 404
+G+G +G VY + + VAIK + ++ +E+ +L++L+ +++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR--ARIAAEIASGLCFLHSSKPEKI 462
P+ E + D +K +P+ + I + G F+H S I
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---I 150
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVT 492
+H DLKP N LL+ + S K+CDFG+ R +
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI FG+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C L + VA+K L S Q + ++ E+R+L L+H +++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKL-SRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 405 ACPEAWSL---VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
A S+ YL + L L + + ++ GL ++HS+
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG--- 143
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H DLKP N+ ++ + +I DFG+ R E+ + AP+ + Y++T
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWM--HYNQT 201
Query: 522 GVLTPKSDSYSFGLIILQLLTGR 544
D +S G I+ +LL G+
Sbjct: 202 ------VDIWSVGCIMAELLQGK 218
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI D G+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 65/293 (22%)
Query: 350 VGQGGFGCVYKG-EMLGRTV-AIKMLYSH-----NMQGQLEFQQEVRVLSKLQHPHLVTL 402
+GQG +G V E R + AIK++ + N + + EVR++ KL HP++ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 403 LGACPEA--WSLVYEYLPNGSLQDRL--------------FRKSNVSP------------ 434
+ LV E G L D+L K+ + P
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 435 ---------LLWKDR--ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS--SK 481
+ +++ + I +I S L +LH+ + I H D+KP+N L + S K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIK 210
Query: 482 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQ 539
+ DFG+ + + L ++ T G+ + PE T PK D++S G+++
Sbjct: 211 LVDFGLSKEFYK--LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 540 LLTGRLP---VGLAGEVRRAVSCGKLS------SILDPLAGDWPTFVARRLVD 583
LL G +P V A + + ++ KL ++L PLA D + + R VD
Sbjct: 269 LLMGAVPFPGVNDADTISQVLN-KKLCFENPNYNVLSPLARDLLSNLLNRNVD 320
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 438 KDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLVTED 494
D R+ +I G+ +LH + IVH DLKPQNILL S KI DFG+ R +
Sbjct: 131 NDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 495 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
G+ Y PE +T +D ++ G+I LLT P
Sbjct: 188 C-------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI D G+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 40/178 (22%)
Query: 343 NFSESFK--------VGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK 393
NF +S K +G G G V++G GR VA+K + L E+++L++
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTE 64
Query: 394 LQ-HPHLVTLLGACPEA---WSLVYEYLPNGSLQDRLFRKSNVSP---LLWKDRARIAA- 445
HP+++ C E + + L N +LQD L NVS L K+ I+
Sbjct: 65 SDDHPNVIRY--YCSETTDRFLYIALELCNLNLQD-LVESKNVSDENLKLQKEYNPISLL 121
Query: 446 -EIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------------ELSSKICDFGICR 489
+IASG+ LHS K I+H DLKPQNIL+ + L I DFG+C+
Sbjct: 122 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C G VA+K L S Q + ++ E+R+L ++H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 405 ACPEAWSL-----VY--EYLPNGSLQDRL----FRKSNVSPLLWKDRARIAAEIASGLCF 453
A SL VY +L L + + +V L++ +I GL +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY--------QILRGLKY 140
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + KI D G+ R ++ + AP+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LLTGR
Sbjct: 198 M--HYNQT------VDIWSVGCIMAELLTGR 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ E+ ++ + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 94 PQKTL--EEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C L + VA+K L S Q + ++ E+R+L L+H +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKL-SRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 405 ACPEAWSL---VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
A S+ YL + L L + + ++ GL ++HS+
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG--- 151
Query: 462 IVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 521
I+H DLKP N+ ++ + +I DFG+ R E+ + AP+ + Y++T
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWM--HYNQT 209
Query: 522 GVLTPKSDSYSFGLIILQLLTGR 544
D +S G I+ +LL G+
Sbjct: 210 ------VDIWSVGCIMAELLQGK 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 383 EFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQ--DRLF---RKSNVSPL 435
+F+ E+++++ +++ + +T G + ++YEY+ N S+ D F K+ +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 436 LWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 495
+ I + + ++H+ K I H D+KP NIL+D K+ DFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 496 LYLPSFHRSTAPKGSFPYADPEY--HRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 549
+ +G++ + PE+ + + K D +S G+ + + +P L
Sbjct: 207 I--------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 350 VGQGGFG--CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLG 404
VG G +G C L + VA+K L S Q + ++ E+R+L L+H +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKL-SRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 405 ACPEAWSL-----VYEYLP------NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
A S+ VY N ++ + +V L++ ++ GL +
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVY--------QLLRGLKY 146
Query: 454 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY 513
+HS+ I+H DLKP N+ ++ + +I DFG+ R E+ + AP+ +
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNW 203
Query: 514 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 544
Y++T D +S G I+ +LL G+
Sbjct: 204 M--HYNQT------VDIWSVGCIMAELLQGK 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + + VA+K + + ++E+ L+HP++V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P ++V EY G L +R+ S +D AR ++ SG+ + H+ + + H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFS----EDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLK +N LLD + KICDFG + + L S +ST G+ Y PE
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTV--GTPAYIAPE----- 186
Query: 523 VLTPK------SDSYSFGLIILQLLTGRLP 546
VL K +D +S G+ + +L G P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+S ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 190
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ E+ ++ + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 94 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ E+ ++ + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 408 -----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
E + VY + L D + L + + + ++ G+ LHS+ I
Sbjct: 94 PQKTLEEFQDVYLVM---ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---I 147
Query: 463 VHGDLKPQNILLDSELSSKICDFGICR 489
+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + + VA+K + + ++E+ L+HP++V +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P ++V EY G L +R+ S +D AR ++ SG+ + H+ + + H
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFS----EDEARFFFQQLISGVSYCHAMQ---VCH 137
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLK +N LLD + KICDFG + + L S +ST G+ Y PE
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTV--GTPAYIAPE----- 185
Query: 523 VLTPK------SDSYSFGLIILQLLTGRLP 546
VL K +D +S G+ + +L G P
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSKL-QHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K+ H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+S ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 190
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKML-YSHNMQGQLEFQQ----EVRVLSKLQHPHLVTL 402
+G+G F VYK + + VAIK + H + + + E+++L +L HP+++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 403 LGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPE 460
L A SLV++++ + K N L GL +LH
Sbjct: 78 LDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---H 131
Query: 461 KIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP N+LLD K+ DFG+ +
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+S ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 190
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 16/198 (8%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQ---EVRVLSKLQHPHLVTLLGACP 407
G G C +LG VA+K L S Q Q ++ E+ +L + H ++++LL
Sbjct: 35 GAQGIVCAAFDTVLGINVAVKKL-SRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 94 PQKTL--EEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLKP NI++ S+ + KI DFG+ R + + P Y PE
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-------YRAPEVILGMGYA 203
Query: 526 PKSDSYSFGLIILQLLTG 543
D +S G I+ +L+ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSKL-QHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K+ H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAA---EIASGLCFLHSSKPEKI 462
SL E + + L +N+S ++ D R++ ++ G+ LHS+ I
Sbjct: 94 PQKSL--EEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 463 VHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y+R
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT-----------PYVVTRYYRAP 194
Query: 523 VLT------PKSDSYSFGLIILQLLTG 543
+ D +S G+I+ +++ G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ---HPHLVTLLGACP 407
G G C +LG VA+K L S Q Q ++ R L L+ H ++++LL
Sbjct: 33 GAQGIVCAAFDTVLGINVAVKKL-SRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT 91
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 92 PQKTL--EEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 148
Query: 466 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT 525
DLKP NI++ S+ + KI DFG+ R + + + P Y PE
Sbjct: 149 DLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-------YRAPEVILGMGYK 201
Query: 526 PKSDSYSFGLIILQLLTGRL 545
D +S G I+ +L+ G +
Sbjct: 202 ENVDIWSVGCIMGELVKGSV 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 408 -----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
E + VY + L D + L + + + ++ G+ LHS+ I
Sbjct: 94 PQKTLEEFQDVYLVM---ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---I 147
Query: 463 VHGDLKPQNILLDSELSSKICDFGICR 489
+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
Query: 397 PHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
PH+V +L ++ E + G L R+ + + + ++ A I +I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTA 121
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAP 507
+ FLHS I H D+KP+N+L S+ K+ DFG + T++ L P +
Sbjct: 122 IQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY------ 172
Query: 508 KGSFPYADPEYHRTGVLTPKS-----DSYSFGLIILQLLTGRLP 546
P Y VL P+ D +S G+I+ LL G P
Sbjct: 173 -------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
Query: 397 PHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG 450
PH+V +L ++ E + G L R+ + + + ++ A I +I +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTA 140
Query: 451 LCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRSTAP 507
+ FLHS I H D+KP+N+L S+ K+ DFG + T++ L P +
Sbjct: 141 IQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY------ 191
Query: 508 KGSFPYADPEYHRTGVLTPKS-----DSYSFGLIILQLLTGRLP 546
P Y VL P+ D +S G+I+ LL G P
Sbjct: 192 -------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 94 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 28 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 408 -----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 462
E + VY + L D + L + + + ++ G+ LHS+ I
Sbjct: 87 PQKTLEEFQDVYLVM---ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---I 140
Query: 463 VHGDLKPQNILLDSELSSKICDFGICR 489
+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 36 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 95 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 36 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 95 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 35 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 94 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 34 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 93 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 149
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 150 DLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 73 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 132 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL----- 402
+G GG G V+ + VAIK + + Q +E++++ +L H ++V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 403 ---------LGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 453
+G+ E S+ Y+ ++ L PLL + ++ GL +
Sbjct: 79 PSGSQLTDDVGSLTELNSV---YIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKY 135
Query: 454 LHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFP 512
+HS+ ++H DLKP N+ +++E L KI DFG+ R++ D Y H S +
Sbjct: 136 IHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTKW- 189
Query: 513 YADPEYHRTGVLTPKS-----DSYSFGLIILQLLTGR 544
Y P +L+P + D ++ G I ++LTG+
Sbjct: 190 YRSPRL----LLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 29 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 88 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 29 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 88 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 73 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 132 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H ++++LL
Sbjct: 28 GAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSKPEKIVHG 465
+L E + L L +N+ ++ D R++ + LC + I+H
Sbjct: 87 PQKTL--EEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 143
Query: 466 DLKPQNILLDSELSSKICDFGICR 489
DLKP NI++ S+ + KI DFG+ R
Sbjct: 144 DLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 23/161 (14%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 37 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 93
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 94 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 499
I+H DLKP NI++ S+ + KI DFG+ R + +P
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP 186
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 190
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 350 VGQGGFGCVYKG--EMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSKL-QHPHLVTLLG 404
+G G G V +L R VAIK L S Q Q ++ R VL K+ H +++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 405 ACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAA---EIASGLCFLHSSKP 459
SL E + + L +N+S ++ D R++ ++ G+ LHS+
Sbjct: 91 VFTPQKSL--EEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG- 146
Query: 460 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH 519
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y+
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMT-----------PYVVTRYY 191
Query: 520 RTGVLT------PKSDSYSFGLIILQLLTG 543
R + D +S G+I+ +++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSKL-QHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K+ H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 408 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWK--DRARIAA---EIASGLCFLHSSKPEKI 462
SL E + + L +N+S ++ D R++ ++ G+ LHS+ I
Sbjct: 94 PQKSL--EEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 463 VHGDLKPQNILLDSELSSKICDFGICR 489
+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 190
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 36 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 92
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 93 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
I+H DLKP NI++ S+ + KI DFG+ R T T ++ + PY Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT-----------PYVVTRY 191
Query: 519 HRTGVLT------PKSDSYSFGLIILQLLTG 543
+R + D +S G I+ +++ G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 29 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 85
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 86 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 35 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 92 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 351 GQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVR--VLSK-LQHPHLVTLLGACP 407
G G C +L R VAIK L S Q Q ++ R VL K + H +++ LL
Sbjct: 40 GAQGIVCAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 96
Query: 408 EAWSLVYEYLPNGSLQD-------RLFRKSNVSPLLWK--DRARIAAEIASGLCFLHSSK 458
+ P SL++ +N+ ++ D R++ + LC +
Sbjct: 97 --------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICR 489
I+H DLKP NI++ S+ + KI DFG+ R
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVY-------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+GGF Y K G+ V ML + + ++ E+ + L +PH+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM--STEIAIHKSLDNPHVVGF 107
Query: 403 LGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHSSK 458
G E VY E SL + R+ V+ + AR + G+ +LH+++
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVT----EPEARYFMRQTIQGVQYLHNNR 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++H DLK N+ L+ ++ KI DFG+ + D R G+ Y PE
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ERKKTLCGTPNYIAPEV 213
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + D +S G I+ LL G+ P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 32/269 (11%)
Query: 349 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEV-RVLSKLQHPHLVTLLGA 405
K+G G FG +Y G + VAIK+ QL ++ ++ R+L V G
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGV 73
Query: 406 CPEAWSLVYEYLPNGSLQDRLF----RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 461
+ LV + L SL+D LF RK ++ +L +A ++ + + F+HS +
Sbjct: 74 EGDYNVLVMDLL-GPSLED-LFNFCSRKLSLKTVLM-----LADQMINRVEFVHS---KS 123
Query: 462 IVHGDLKPQNILLDSELSSK---ICDFGICRLVTEDTL--YLPSFHRSTAPKGSFPYADP 516
+H D+KP N L+ + I DFG+ + + + ++P + + G+ YA
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP-YRENKNLTGTARYASV 182
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP-----VGLAGEVRRAVSCGKLSSILDPLAG 571
H + + D S G +++ L G LP G + +S K+++ ++ L
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCR 242
Query: 572 DWPTFVARRLVDLGLQCCELYGRERPDIT 600
+PT A C L ++PD +
Sbjct: 243 GYPTEFASYF----HYCRSLRFDDKPDYS 267
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVY-------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+GGF Y K G+ V ML + + ++ E+ + L +PH+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM--STEIAIHKSLDNPHVVGF 107
Query: 403 LGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHSSK 458
G E VY E SL + R+ V+ + AR + G+ +LH+++
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVT----EPEARYFMRQTIQGVQYLHNNR 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++H DLK N+ L+ ++ KI DFG+ + D R G+ Y PE
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ERKKXLCGTPNYIAPEV 213
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + D +S G I+ LL G+ P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 68/268 (25%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 128 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 171
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 172 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 530 S-YSFGLIILQLLTGRLPVGLAGEVRRA 556
+ +S G+++ ++ G +P E+ R
Sbjct: 224 AVWSLGILLYDMVCGDIPFEHDEEIIRG 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVY-------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+GGF Y K G+ V ML + + ++ E+ + L +PH+V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM--STEIAIHKSLDNPHVVGF 91
Query: 403 LGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHSSK 458
G E VY E SL + R+ V+ + AR + G+ +LH+++
Sbjct: 92 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVT----EPEARYFMRQTIQGVQYLHNNR 146
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++H DLK N+ L+ ++ KI DFG+ + D R G+ Y PE
Sbjct: 147 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ERKKDLCGTPNYIAPEV 197
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + D +S G I+ LL G+ P
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + + VA+K + + ++E+ L+HP++V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P ++V EY G L +R+ S +D AR ++ SG+ + H+ + + H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFS----EDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLK +N LLD + KIC FG + + L S +ST G+ Y PE
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTV--GTPAYIAPE----- 186
Query: 523 VLTPK------SDSYSFGLIILQLLTGRLP 546
VL K +D +S G+ + +L G P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 350 VGQGGFGCVY-------KGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 402
+G+GGF Y K G+ V ML + + ++ E+ + L +PH+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM--STEIAIHKSLDNPHVVGF 107
Query: 403 LGACPEAWSLVY---EYLPNGSLQDRLFRKSNVSPLLWKDRAR-IAAEIASGLCFLHSSK 458
G E VY E SL + R+ V+ + AR + G+ +LH+++
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVT----EPEARYFMRQTIQGVQYLHNNR 162
Query: 459 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEY 518
++H DLK N+ L+ ++ KI DFG+ + D R G+ Y PE
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG------ERKKDLCGTPNYIAPEV 213
Query: 519 HRTGVLTPKSDSYSFGLIILQLLTGRLP 546
+ + D +S G I+ LL G+ P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 358 VYKGE--MLGRTVAIKMLYSHNMQGQLEF----QQEVRVLSKLQHPHLVTL--LGACPEA 409
VY+ E + R VA+K L S + F Q+E R +LQ PH+V + G +
Sbjct: 50 VYEAEDTVRERIVALK-LXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEI-DG 107
Query: 410 WSLVYEYLPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK 468
V L NG L L R+ ++P R A + L ++ H D+K
Sbjct: 108 QLYVDXRLINGVDLAAXLRRQGPLAP------PRAVAIVRQIGSALDAAHAAGATHRDVK 161
Query: 469 PQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKS 528
P+NIL+ ++ + + DFGI T++ L + G+ Y PE T ++
Sbjct: 162 PENILVSADDFAYLVDFGIASATTDEKL-----TQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 529 DSYSFGLIILQLLTGRLP 546
D Y+ ++ + LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 68/268 (25%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 142
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 143 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 186
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 187 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 530 S-YSFGLIILQLLTGRLPVGLAGEVRRA 556
+ +S G+++ ++ G +P E+ R
Sbjct: 239 AVWSLGILLYDMVCGDIPFEHDEEIIRG 266
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 68/268 (25%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 28 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 87
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 88 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 147
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 148 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 191
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 192 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 243
Query: 530 S-YSFGLIILQLLTGRLPVGLAGEVRRA 556
+ +S G+++ ++ G +P E+ R
Sbjct: 244 AVWSLGILLYDMVCGDIPFEHDEEIIRG 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 68/268 (25%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 142
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 143 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 186
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 187 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 530 S-YSFGLIILQLLTGRLPVGLAGEVRRA 556
+ +S G+++ ++ G +P E+ R
Sbjct: 239 AVWSLGILLYDMVCGDIPFEHDEEIIRG 266
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + + VA+K + + ++E+ L+HP++V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P ++V EY G L +R+ S +D AR ++ SG+ + H+ + + H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFS----EDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLK +N LLD + KIC FG Y S + PK + P Y
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFG----------YSKSSVLHSQPKDTV--GTPAYIAPE 186
Query: 523 VLTPK------SDSYSFGLIILQLLTGRLP 546
VL K +D +S G+ + +L G P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 52 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 105
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 106 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 158 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKVLCGTPNYIAP 208
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 128 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 171
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 172 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 224 AVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 129 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 172
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 173 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 225 AVWSLGILLYDMVCGDIP 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 54 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 107
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 108 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 160 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKVLCGTPNYIAP 210
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 129 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 172
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 173 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 225 AVWSLGILLYDMVCGDIP 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 34 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 87
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 88 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 140 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKTLCGTPNYIAP 190
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 122
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 123 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 171
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 129 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 172
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 173 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 225 AVWSLGILLYDMVCGDIP 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 28 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 81
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 82 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 134 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKVLCGTPNYIAP 184
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 123
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 124 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 172
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 350 VGQGGFGC--VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL--LGA 405
+G G FG + + + VA+K + + ++E+ L+HP++V +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 406 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIA-AEIASGLCFLHSSKPEKIVH 464
P ++V EY G L +R+ S +D AR ++ SG+ + H+ + + H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFS----EDEARFFFQQLISGVSYAHAMQ---VAH 138
Query: 465 GDLKPQNILLDSELSS--KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG 522
DLK +N LLD + KI DFG + H + PK + P Y
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASV--------LH--SQPKSAV--GTPAYIAPE 186
Query: 523 VLTPK------SDSYSFGLIILQLLTGRLP 546
VL K +D +S G+ + +L G P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 137
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 138 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 186
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 123
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 124 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 172
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 128
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 129 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 172
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 173 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 225 AVWSLGILLYDMVCGDIP 242
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 350 VGQGGFGCVYKG---EMLGRTVAIK-MLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA 405
+ GG G +Y + GR V +K +++S + + Q E + L+++ HP +V +
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147
Query: 406 C--------PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS 457
P + +V EY+ SL ++S L + EI L +LHS
Sbjct: 148 VEHTDRHGDPVGY-IVMEYVGGQSL-----KRSKGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 458 KPEKIVHGDLKPQNILLDSELSSKICDFG-ICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
+V+ DLKP+NI+L E K+ D G + R+ + LY G+ + P
Sbjct: 202 G---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY-----------GTPGFQAP 246
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E RTG T +D Y+ G L LT LP
Sbjct: 247 EIVRTGP-TVATDIYTVGR-TLAALTLDLP 274
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 128 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 171
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 172 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 224 AVWSLGILLYDMVCGDIP 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 83
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 84 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 136 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKTLCGTPNYIAP 186
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 333 SLADLQTATCNFSESFKV-------------------GQGGFGCVYKGEMLGRT--VAIK 371
SLA L+ A CN + K+ G GGFG VY G + VAIK
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 372 MLYSHNMQ--GQLE------------------FQQEVRVLSKLQHPHLVTLLGACPEAWS 411
+ + G+L F +R+L + P L+ PE
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 127
Query: 412 LVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 470
+++++ G+LQ+ L R W ++ + H+ ++H D+K +
Sbjct: 128 DLFDFITERGALQEELARS-----FFW--------QVLEAVRHCHNC---GVLHRDIKDE 171
Query: 471 NILLDSELSS-KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSD 529
NIL+D K+ DFG L+ +DT+Y T G+ Y+ PE+ R +S
Sbjct: 172 NILIDLNRGELKLIDFGSGALL-KDTVY-------TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 530 S-YSFGLIILQLLTGRLP 546
+ +S G+++ ++ G +P
Sbjct: 224 AVWSLGILLYDMVCGDIP 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 344 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLL 403
F++ F++ V+ G+++ +++ +K H + + E+ + L H H+V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLK---PHQRE---KMSMEISIHRSLAHQHVVGFH 83
Query: 404 GACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAE-------IASGLCFLHS 456
G E V+ L L R+ ++ L + +A E I G +LH
Sbjct: 84 GFF-EDNDFVFVVL-------ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 457 SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADP 516
++ ++H DLK N+ L+ +L KI DFG+ V D R G+ Y P
Sbjct: 136 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG------ERKKTLCGTPNYIAP 186
Query: 517 EYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
E + + D +S G I+ LL G+ P
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 121
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 122 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 170
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 137
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 138 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 186
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 138
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 139 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 187
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 171
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 172 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 221
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 177
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 178 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 227
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 228 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 138
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 139 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 187
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 141
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 142 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 191
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 192 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 123
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 124 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 172
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 132
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 133 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 182
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 183 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 131
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 132 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 181
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 182 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 127
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 128 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 177
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 127
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 128 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 177
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 138
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 139 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 187
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 133
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 134 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 183
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 184 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 118
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 119 VLEAVRHCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 167
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 125
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 126 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 175
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 176 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 395 QHPHLVTLLGACPEAWS------LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIA 448
Q PH+V ++ ++ +V E L G L R+ + + + ++ + I I
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIG 126
Query: 449 SGLCFLHSSKPEKIVHGDLKPQNILLDSELSS---KICDFGICRLVTEDTLYLPSFHRST 505
+ +LHS I H D+KP+N+L S+ + K+ DFG + T S + T
Sbjct: 127 EAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------SHNSLT 176
Query: 506 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP 546
P + Y PE D +S G+I+ LL G P
Sbjct: 177 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 118
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 119 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 167
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 350 VGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ--GQLE------------------FQQE 387
+G GGFG VY G + VAIK + + G+L F
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 388 VRVLSKLQHPHLVTLLGACPEAWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAE 446
+R+L + P L+ PE +++++ G+LQ+ L R W +
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFW--------Q 157
Query: 447 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS-KICDFGICRLVTEDTLYLPSFHRST 505
+ + H+ ++H D+K +NIL+D K+ DFG L+ +DT+Y T
Sbjct: 158 VLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY-------T 206
Query: 506 APKGSFPYADPEYHRTGVLTPKSDS-YSFGLIILQLLTGRLPVGLAGEVRRA 556
G+ Y+ PE+ R +S + +S G+++ ++ G +P E+ R
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,823,110
Number of Sequences: 62578
Number of extensions: 808374
Number of successful extensions: 4340
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 2381
Number of HSP's gapped (non-prelim): 1178
length of query: 688
length of database: 14,973,337
effective HSP length: 105
effective length of query: 583
effective length of database: 8,402,647
effective search space: 4898743201
effective search space used: 4898743201
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)