Query 005619
Match_columns 688
No_of_seqs 750 out of 4908
Neff 10.3
Searched_HMMs 46136
Date Thu Mar 28 11:10:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.3E-64 2.7E-69 593.9 44.9 532 1-607 76-611 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.6E-58 3.5E-63 542.3 42.8 513 17-604 68-585 (968)
3 KOG4194 Membrane glycoprotein 100.0 4E-41 8.6E-46 334.1 7.5 372 142-584 81-456 (873)
4 KOG0472 Leucine-rich repeat pr 100.0 1.1E-42 2.4E-47 330.6 -9.8 473 18-580 45-541 (565)
5 KOG4194 Membrane glycoprotein 100.0 2.7E-39 5.9E-44 321.0 8.3 374 164-606 78-455 (873)
6 KOG0472 Leucine-rich repeat pr 100.0 1.8E-41 3.9E-46 322.4 -11.3 468 1-556 52-541 (565)
7 KOG0618 Serine/threonine phosp 100.0 4.4E-36 9.5E-41 314.1 -2.4 472 10-578 13-487 (1081)
8 KOG0618 Serine/threonine phosp 100.0 9.8E-36 2.1E-40 311.5 -0.9 467 12-577 39-510 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 6.7E-35 1.4E-39 291.8 -2.3 321 67-417 30-352 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 4.7E-34 1E-38 285.7 -2.2 383 16-410 5-392 (1255)
11 KOG4237 Extracellular matrix p 99.9 1.7E-27 3.7E-32 227.2 -1.1 408 138-577 66-498 (498)
12 PLN03210 Resistant to P. syrin 99.9 4E-23 8.6E-28 243.0 27.7 341 155-577 549-903 (1153)
13 PLN03210 Resistant to P. syrin 99.9 2E-22 4.2E-27 237.1 28.5 337 110-554 551-904 (1153)
14 KOG4237 Extracellular matrix p 99.9 1.1E-25 2.3E-30 215.0 -5.4 392 143-581 50-478 (498)
15 PRK15387 E3 ubiquitin-protein 99.9 3.6E-21 7.8E-26 209.7 16.7 114 190-323 203-316 (788)
16 PRK15387 E3 ubiquitin-protein 99.9 9.4E-21 2E-25 206.5 18.8 263 71-400 203-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 3.6E-19 7.9E-24 195.6 13.2 181 214-417 179-359 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 7.4E-19 1.6E-23 193.2 13.7 205 190-422 180-384 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 4.7E-20 1E-24 189.1 3.4 280 217-579 2-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 5.1E-19 1.1E-23 181.4 4.3 253 162-415 21-318 (319)
21 KOG0617 Ras suppressor protein 99.7 1.3E-18 2.9E-23 147.5 -4.1 186 326-584 27-216 (264)
22 PLN03150 hypothetical protein; 99.6 2.1E-15 4.6E-20 165.7 10.6 118 496-613 419-538 (623)
23 KOG0617 Ras suppressor protein 99.6 6.4E-17 1.4E-21 137.4 -3.6 179 233-417 29-212 (264)
24 KOG0532 Leucine-rich repeat (L 99.4 1.2E-14 2.6E-19 146.3 -2.8 174 332-581 75-248 (722)
25 PLN03150 hypothetical protein; 99.4 2.4E-12 5.2E-17 141.7 11.0 92 494-585 441-533 (623)
26 COG4886 Leucine-rich repeat (L 99.3 7E-12 1.5E-16 132.2 8.3 180 331-585 115-295 (394)
27 KOG0532 Leucine-rich repeat (L 99.3 1.7E-13 3.6E-18 138.1 -4.5 133 263-425 77-209 (722)
28 KOG1909 Ran GTPase-activating 99.2 5.6E-12 1.2E-16 120.2 2.6 114 305-418 88-227 (382)
29 KOG1259 Nischarin, modulator o 99.2 6.1E-12 1.3E-16 117.0 1.9 87 494-583 328-415 (490)
30 COG4886 Leucine-rich repeat (L 99.2 3.6E-11 7.7E-16 126.9 7.7 182 308-563 115-297 (394)
31 KOG3207 Beta-tubulin folding c 99.2 8.4E-12 1.8E-16 122.3 2.3 207 68-298 120-339 (505)
32 PF14580 LRR_9: Leucine-rich r 99.2 5.2E-11 1.1E-15 106.9 6.7 109 90-201 17-126 (175)
33 KOG1909 Ran GTPase-activating 99.1 2.1E-11 4.5E-16 116.4 2.6 113 210-322 182-311 (382)
34 KOG3207 Beta-tubulin folding c 99.1 1.4E-11 3.1E-16 120.7 1.2 185 137-322 119-314 (505)
35 KOG1259 Nischarin, modulator o 99.1 3.7E-11 8.1E-16 111.9 2.8 134 352-558 280-414 (490)
36 PF14580 LRR_9: Leucine-rich r 99.1 1.5E-10 3.1E-15 104.1 5.7 108 115-226 17-126 (175)
37 PF13855 LRR_8: Leucine rich r 99.0 2.8E-10 6.1E-15 83.9 3.2 60 520-579 2-61 (61)
38 PF13855 LRR_8: Leucine rich r 98.9 5.2E-10 1.1E-14 82.4 3.2 61 495-555 1-61 (61)
39 KOG4658 Apoptotic ATPase [Sign 98.9 2.6E-09 5.7E-14 120.3 7.2 249 43-299 544-808 (889)
40 KOG4658 Apoptotic ATPase [Sign 98.9 3.7E-09 8.1E-14 119.1 7.6 274 115-395 521-809 (889)
41 KOG0531 Protein phosphatase 1, 98.8 6.3E-10 1.4E-14 117.5 -0.6 224 65-324 91-320 (414)
42 KOG0531 Protein phosphatase 1, 98.8 9E-10 2E-14 116.3 -1.6 245 89-349 69-322 (414)
43 KOG2120 SCF ubiquitin ligase, 98.7 3.5E-10 7.6E-15 105.5 -4.8 64 66-129 207-272 (419)
44 KOG1859 Leucine-rich repeat pr 98.6 1.1E-09 2.5E-14 113.9 -5.7 85 494-582 208-294 (1096)
45 KOG1859 Leucine-rich repeat pr 98.5 1.7E-09 3.6E-14 112.7 -6.7 128 93-226 165-292 (1096)
46 KOG2120 SCF ubiquitin ligase, 98.5 6.5E-09 1.4E-13 97.2 -2.7 158 139-296 185-349 (419)
47 KOG4579 Leucine-rich repeat (L 98.5 7.4E-09 1.6E-13 85.5 -2.3 89 495-586 77-165 (177)
48 KOG2982 Uncharacterized conser 98.3 1.4E-07 2.9E-12 88.5 1.3 215 11-226 38-262 (418)
49 KOG4341 F-box protein containi 98.3 4.6E-08 1E-12 96.0 -3.5 135 186-320 292-437 (483)
50 COG5238 RNA1 Ran GTPase-activa 98.3 1.8E-07 3.9E-12 86.6 -0.1 111 187-298 156-285 (388)
51 KOG2982 Uncharacterized conser 98.2 2.4E-07 5.2E-12 86.9 0.5 105 45-150 46-157 (418)
52 KOG4579 Leucine-rich repeat (L 98.2 2.6E-07 5.7E-12 76.5 -0.8 139 357-567 28-170 (177)
53 COG5238 RNA1 Ran GTPase-activa 98.1 3.8E-07 8.1E-12 84.5 -0.7 87 331-417 213-316 (388)
54 KOG3665 ZYG-1-like serine/thre 98.1 1E-06 2.2E-11 97.1 2.3 110 18-129 122-232 (699)
55 KOG4341 F-box protein containi 98.1 1.1E-07 2.4E-12 93.5 -5.6 293 70-364 139-460 (483)
56 PF12799 LRR_4: Leucine Rich r 98.0 2.9E-06 6.3E-11 56.9 2.4 36 520-556 2-37 (44)
57 PF12799 LRR_4: Leucine Rich r 98.0 5.7E-06 1.2E-10 55.5 3.2 37 69-105 1-37 (44)
58 KOG3665 ZYG-1-like serine/thre 97.9 9.2E-06 2E-10 89.7 3.5 132 93-228 123-265 (699)
59 KOG1644 U2-associated snRNP A' 97.8 3.5E-05 7.7E-10 68.7 6.2 85 116-201 41-126 (233)
60 PRK15386 type III secretion pr 97.7 8.7E-05 1.9E-09 75.4 7.8 73 330-415 50-123 (426)
61 KOG1644 U2-associated snRNP A' 97.7 7.3E-05 1.6E-09 66.8 5.9 85 139-226 42-126 (233)
62 PF13306 LRR_5: Leucine rich r 97.7 9.2E-05 2E-09 64.2 6.4 62 157-221 5-66 (129)
63 PF13306 LRR_5: Leucine rich r 97.6 0.00013 2.8E-09 63.3 6.5 123 182-311 6-128 (129)
64 PRK15386 type III secretion pr 97.5 0.0005 1.1E-08 70.0 9.2 78 305-393 48-125 (426)
65 KOG2739 Leucine-rich acidic nu 97.0 0.00036 7.8E-09 65.3 2.6 90 11-105 36-129 (260)
66 KOG1947 Leucine rich repeat pr 96.9 0.00018 4E-09 78.3 -0.6 187 90-287 186-389 (482)
67 KOG1947 Leucine rich repeat pr 96.8 0.00021 4.6E-09 77.8 -1.0 188 186-393 241-440 (482)
68 KOG2739 Leucine-rich acidic nu 96.8 0.00066 1.4E-08 63.6 2.0 86 115-201 41-129 (260)
69 KOG2123 Uncharacterized conser 96.6 0.00017 3.7E-09 67.6 -3.0 79 115-194 39-123 (388)
70 KOG2123 Uncharacterized conser 96.5 0.00025 5.3E-09 66.6 -2.5 101 16-123 17-123 (388)
71 PF00560 LRR_1: Leucine Rich R 95.9 0.0028 6.1E-08 35.2 0.6 19 545-564 2-20 (22)
72 PF00560 LRR_1: Leucine Rich R 95.6 0.0038 8.3E-08 34.6 0.2 20 521-541 2-21 (22)
73 KOG4308 LRR-containing protein 94.4 0.00054 1.2E-08 72.6 -9.9 60 497-556 235-303 (478)
74 PF13504 LRR_7: Leucine rich r 93.5 0.039 8.4E-07 28.3 1.0 14 71-84 3-16 (17)
75 KOG0473 Leucine-rich repeat pr 93.5 0.0035 7.5E-08 57.5 -4.9 84 494-580 41-124 (326)
76 KOG4308 LRR-containing protein 92.8 0.0011 2.4E-08 70.2 -10.7 19 182-200 166-184 (478)
77 smart00369 LRR_TYP Leucine-ric 91.4 0.15 3.1E-06 29.6 1.7 15 543-557 2-16 (26)
78 smart00370 LRR Leucine-rich re 91.4 0.15 3.1E-06 29.6 1.7 15 543-557 2-16 (26)
79 smart00369 LRR_TYP Leucine-ric 90.6 0.18 3.9E-06 29.2 1.7 22 518-539 1-22 (26)
80 smart00370 LRR Leucine-rich re 90.6 0.18 3.9E-06 29.2 1.7 22 518-539 1-22 (26)
81 PF13516 LRR_6: Leucine Rich r 88.0 0.2 4.3E-06 28.3 0.5 20 404-423 2-21 (24)
82 TIGR00864 PCC polycystin catio 86.6 0.43 9.3E-06 59.8 2.7 37 549-585 1-37 (2740)
83 KOG3864 Uncharacterized conser 84.8 0.14 3.1E-06 46.4 -1.9 34 356-389 151-185 (221)
84 KOG0473 Leucine-rich repeat pr 84.3 0.039 8.4E-07 50.9 -5.7 83 332-417 42-124 (326)
85 KOG3864 Uncharacterized conser 81.1 0.38 8.3E-06 43.7 -0.6 60 18-79 101-161 (221)
86 smart00365 LRR_SD22 Leucine-ri 79.1 1.6 3.5E-05 25.2 1.7 14 543-556 2-15 (26)
87 smart00364 LRR_BAC Leucine-ric 72.1 2.5 5.4E-05 24.4 1.3 17 70-86 3-19 (26)
88 smart00368 LRR_RI Leucine rich 68.7 3.9 8.4E-05 24.1 1.7 13 544-556 3-15 (28)
89 KOG4242 Predicted myosin-I-bin 65.7 23 0.0005 37.0 7.4 108 286-393 355-481 (553)
90 KOG4242 Predicted myosin-I-bin 63.5 39 0.00085 35.4 8.5 108 139-249 165-280 (553)
91 KOG3763 mRNA export factor TAP 61.0 6 0.00013 41.9 2.4 81 90-170 216-307 (585)
92 KOG3763 mRNA export factor TAP 58.6 6.1 0.00013 41.9 2.0 66 137-202 216-284 (585)
93 PF07204 Orthoreo_P10: Orthore 48.9 16 0.00035 28.5 2.3 32 634-665 40-71 (98)
94 smart00367 LRR_CC Leucine-rich 43.1 8.6 0.00019 22.0 0.1 12 18-29 2-13 (26)
95 TIGR00864 PCC polycystin catio 32.6 26 0.00056 45.1 2.0 32 501-532 1-32 (2740)
96 PF15102 TMEM154: TMEM154 prot 28.9 27 0.00058 30.1 0.9 19 647-665 70-88 (146)
97 PF01102 Glycophorin_A: Glycop 26.4 29 0.00064 29.1 0.7 17 642-658 70-86 (122)
98 PF02439 Adeno_E3_CR2: Adenovi 25.1 44 0.00096 21.3 1.2 8 641-648 12-19 (38)
99 PF15176 LRR19-TM: Leucine-ric 21.2 1E+02 0.0022 24.7 2.7 9 641-649 19-27 (102)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.3e-64 Score=593.91 Aligned_cols=532 Identities=33% Similarity=0.495 Sum_probs=448.2
Q ss_pred CCCCCCcccCchhhcCCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCC
Q 005619 1 MSSNQLSGILPSVIANLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCN 80 (688)
Q Consensus 1 Ls~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~ 80 (688)
|++|+++|.++..|.++++|++|+|++|.+.+ .+|...+.++++|++|++++|.+.+.++. ..+++|++|++++|.
T Consensus 76 L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~-~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L~Ls~n~ 151 (968)
T PLN00113 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSG-PIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETLDLSNNM 151 (968)
T ss_pred ecCCCccccCChHHhCCCCCCEEECCCCccCC-cCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEEECcCCc
Confidence 46778888888888888888888888888876 67755566888888888888887665553 456788888888888
Q ss_pred C-CCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCC--CCCCCcCEEEccCCCCCCCCCh
Q 005619 81 L-GVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLT--SAQHGLISLDISSNNFTGKLPQ 157 (688)
Q Consensus 81 l-~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~~L~~L~ls~n~~~~~~~~ 157 (688)
+ +.+|..+..+++|++|++++|.+.+.+|..+ .++++|++|++++|.+.+.... ..+++|++|++++|++++.+|.
T Consensus 152 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 230 (968)
T PLN00113 152 LSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL-TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPY 230 (968)
T ss_pred ccccCChHHhcCCCCCEEECccCcccccCChhh-hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCCh
Confidence 8 4678888888888888888888887777765 4788888888888887754221 3677888888888888878887
Q ss_pred hhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCC
Q 005619 158 NMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLT 237 (688)
Q Consensus 158 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 237 (688)
.+. .+++|++|++++|.+++..|..++++++|++|++++|.+.+.+|.. +..+++|+.|++++|.+.+..|..+..++
T Consensus 231 ~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 308 (968)
T PLN00113 231 EIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS-IFSLQKLISLDLSDNSLSGEIPELVIQLQ 308 (968)
T ss_pred hHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchh-HhhccCcCEEECcCCeeccCCChhHcCCC
Confidence 775 6888888888888888888888888888888888888887766655 35778888888888888877888888888
Q ss_pred CCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEcc
Q 005619 238 RLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDIS 317 (688)
Q Consensus 238 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 317 (688)
+|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..++.+++|+.|++++|.+.+.+|..+..+++|+.|+++
T Consensus 309 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~ 388 (968)
T PLN00113 309 NLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF 388 (968)
T ss_pred CCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECc
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcCcccccccc-ccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCC
Q 005619 318 ENNLSGSMISTL-NLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPI 396 (688)
Q Consensus 318 ~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 396 (688)
+|.+.+..+..+ .+++|+.|++++|.+++.+|..+..++.|+.|++++|.+++.++..+..+++|+.|++++|++.+.+
T Consensus 389 ~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 468 (968)
T PLN00113 389 SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468 (968)
T ss_pred CCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeec
Confidence 888887777665 7788888888888888888888888888888888888888888877788888888888888888777
Q ss_pred chhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcce
Q 005619 397 PHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQV 476 (688)
Q Consensus 397 ~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 476 (688)
|..+ ..++|+.|++++|++++.+|..+.+
T Consensus 469 p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~-------------------------------------------------- 497 (968)
T PLN00113 469 PDSF-GSKRLENLDLSRNQFSGAVPRKLGS-------------------------------------------------- 497 (968)
T ss_pred Cccc-ccccceEEECcCCccCCccChhhhh--------------------------------------------------
Confidence 7655 4578888888888888877776543
Q ss_pred EEEeeeccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCccc
Q 005619 477 EVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLN 556 (688)
Q Consensus 477 ~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (688)
++.|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++.+|..|+++++|+.|||++|+++
T Consensus 498 -----------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 560 (968)
T PLN00113 498 -----------------LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560 (968)
T ss_pred -----------------hhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccc
Confidence 567899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCCCCCCCCCEEecCCCcCccCCCCCcccCCcCccccCCCCCCCCCC
Q 005619 557 GQIPPQLTELHSLSKFDVSYNDLSGPIPDKEQFSTFDESSYRGNLHLCGPP 607 (688)
Q Consensus 557 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 607 (688)
+.+|..+.++++|++|++++|+++|.+|..+++.++...++.||+.+||.+
T Consensus 561 ~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 561 GEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGD 611 (968)
T ss_pred ccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCc
Confidence 999999999999999999999999999999999999999999999999865
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-58 Score=542.28 Aligned_cols=513 Identities=30% Similarity=0.479 Sum_probs=456.9
Q ss_pred CCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCC-CCcchhhhCCCCCC
Q 005619 17 LTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNL-GVIPNFLLHQFNLK 95 (688)
Q Consensus 17 l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l-~~lp~~~~~l~~L~ 95 (688)
..+++.|||++|.+++ .++ ..+..+++|+.|+|++|.+.+.++...+..+.+|++|++++|++ +.+|. ..+++|+
T Consensus 68 ~~~v~~L~L~~~~i~~-~~~-~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~ 143 (968)
T PLN00113 68 SSRVVSIDLSGKNISG-KIS-SAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLE 143 (968)
T ss_pred CCcEEEEEecCCCccc-cCC-hHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCC
Confidence 3579999999999987 555 57899999999999999988777776677899999999999999 56664 5678999
Q ss_pred EEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCC--CCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccC
Q 005619 96 YLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLT--SAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISK 173 (688)
Q Consensus 96 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~ 173 (688)
+|++++|.+++.+|..+ .++++|++|++++|.+.+.... ..+++|++|++++|.+++.+|..+. .+++|++|++++
T Consensus 144 ~L~Ls~n~~~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~ 221 (968)
T PLN00113 144 TLDLSNNMLSGEIPNDI-GSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELG-QMKSLKWIYLGY 221 (968)
T ss_pred EEECcCCcccccCChHH-hcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHc-CcCCccEEECcC
Confidence 99999999988888775 5899999999999988754222 3778999999999999988888886 799999999999
Q ss_pred CCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcc
Q 005619 174 NSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKI 253 (688)
Q Consensus 174 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 253 (688)
|.+++.+|..++++++|++|++++|.+.+.+|.. +..+++|+.|++++|.+.+..|..+..+++|++|++++|.+.+..
T Consensus 222 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 222 NNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS-LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred CccCCcCChhHhcCCCCCEEECcCceeccccChh-HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 9999899999999999999999999998777765 578999999999999999888889999999999999999999889
Q ss_pred cccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCcccccccc-ccC
Q 005619 254 KDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTL-NLS 332 (688)
Q Consensus 254 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~-~~~ 332 (688)
|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+..+..+ .++
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~ 380 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG 380 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcC
Confidence 9889999999999999999999999999999999999999999998899999999999999999999988777666 788
Q ss_pred ccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEcc
Q 005619 333 SVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLS 412 (688)
Q Consensus 333 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls 412 (688)
+|+.|++++|.+.+.+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++.+|..+..+++|+.|+++
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred CCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeecccccccccc
Q 005619 413 HNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGV 492 (688)
Q Consensus 413 ~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (688)
+|++.+.+|..+.
T Consensus 461 ~n~~~~~~p~~~~------------------------------------------------------------------- 473 (968)
T PLN00113 461 RNKFFGGLPDSFG------------------------------------------------------------------- 473 (968)
T ss_pred CceeeeecCcccc-------------------------------------------------------------------
Confidence 9999877775331
Q ss_pred ccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEE
Q 005619 493 ILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKF 572 (688)
Q Consensus 493 ~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 572 (688)
.+.|+.||+++|++++.+|..|..+++|+.|+|++|++++.+|..++++++|++|+|++|++++.+|..+..+++|++|
T Consensus 474 -~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 552 (968)
T PLN00113 474 -SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQL 552 (968)
T ss_pred -cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEE
Confidence 3568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcCccCCCCC-cccCCcCccccCCCCCCC
Q 005619 573 DVSYNDLSGPIPDK-EQFSTFDESSYRGNLHLC 604 (688)
Q Consensus 573 ~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~ 604 (688)
|+++|+++|.+|.. ..+..+......+|+..+
T Consensus 553 ~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 553 DLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999975 345556666677776554
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=334.06 Aligned_cols=372 Identities=23% Similarity=0.270 Sum_probs=240.5
Q ss_pred CEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcc
Q 005619 142 ISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLS 221 (688)
Q Consensus 142 ~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 221 (688)
+.|++++|.+. .+....+.++++|+++++.+|.++ .+|...+...+|+.|+|.+|.|+ ++....+..++.|+.|||+
T Consensus 81 ~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 81 QTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLS 157 (873)
T ss_pred eeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhh
Confidence 34555555554 333333345566666666555555 34443333444666666666555 4444445555556666666
Q ss_pred cCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCC
Q 005619 222 NNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNI 301 (688)
Q Consensus 222 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 301 (688)
.|.|+...-+.|..-.++++|+|++|.|+....+.|..+.+|..|.|++|+++...+..|.++++|+.|+|..|++...-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 66655554455555556666666666666555556666666666666666666555555666666666666666665333
Q ss_pred cccccCCCCCcEEEccCCcCcccccccc-ccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCC
Q 005619 302 PVQFNNLAILQILDISENNLSGSMISTL-NLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHS 380 (688)
Q Consensus 302 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 380 (688)
.-.|.++++|+.|.+..|.+.......| .+.++++|+|..|++...-..++++++.|+.|++++|.|....++.++.++
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 4556666666666666666666555555 666666666666666655555666667777777777776666666666667
Q ss_pred CccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccce
Q 005619 381 NLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTV 460 (688)
Q Consensus 381 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (688)
+|+.|+|+.|+++...++.|..+..|+.|.|++|+++..--..+
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af------------------------------------ 361 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAF------------------------------------ 361 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHH------------------------------------
Confidence 77777777777766666666666777777777776641100000
Q ss_pred ecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCC---hhhhccCCCCeeeCCCCcCccCCCc
Q 005619 461 QLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIP---SEICDLQNIHGLNLSHNFLSGSIPE 537 (688)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (688)
.-+++|++|||++|.++..+. ..|.++++|+.|+|.+|++..+...
T Consensus 362 -------------------------------~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~kr 410 (873)
T KOG4194|consen 362 -------------------------------VGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKR 410 (873)
T ss_pred -------------------------------HHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchh
Confidence 114566777777777765543 4577888999999999999866667
Q ss_pred cccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecCCCcCccCCC
Q 005619 538 SFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVSYNDLSGPIP 584 (688)
Q Consensus 538 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 584 (688)
+|.++.+||.|||.+|.|..+-|.+|..| .|+.|-+..-.+-|.|.
T Consensus 411 Afsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 411 AFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred hhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEecc
Confidence 89999999999999999998888999988 89999888888888773
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-42 Score=330.60 Aligned_cols=473 Identities=26% Similarity=0.389 Sum_probs=363.1
Q ss_pred CCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcchhhhCCCCCCEE
Q 005619 18 TSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPNFLLHQFNLKYL 97 (688)
Q Consensus 18 ~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L 97 (688)
..|+.|++++|.+.. +. ..+.++..|.++++++|......+ +++.+..++.++.++|++.++|+.+..+.+|+.+
T Consensus 45 v~l~~lils~N~l~~--l~-~dl~nL~~l~vl~~~~n~l~~lp~--aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l 119 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEV--LR-EDLKNLACLTVLNVHDNKLSQLPA--AIGELEALKSLNVSHNKLSELPEQIGSLISLVKL 119 (565)
T ss_pred cchhhhhhccCchhh--cc-HhhhcccceeEEEeccchhhhCCH--HHHHHHHHHHhhcccchHhhccHHHhhhhhhhhh
Confidence 467888888888764 32 468888888888888887654333 3777788888888888888888888888888888
Q ss_pred ECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCC-CCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCC
Q 005619 98 DLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTS-AQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSF 176 (688)
Q Consensus 98 ~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 176 (688)
+.++|.+. .+|+.+. .+..|+.++..+|+++..+... .+.+|..+++.+|++. ..|+... .++.|++++...|.+
T Consensus 120 ~~s~n~~~-el~~~i~-~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 120 DCSSNELK-ELPDSIG-RLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLDCNSNLL 195 (565)
T ss_pred hcccccee-ecCchHH-HHhhhhhhhccccccccCchHHHHHHHHHHhhccccchh-hCCHHHH-HHHHHHhcccchhhh
Confidence 88888887 6676664 7788888888888888754332 6677888888888888 6666655 388888888888877
Q ss_pred CcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCccccc
Q 005619 177 EGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDG 256 (688)
Q Consensus 177 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 256 (688)
+ .+|+.++.+.+|..|++..|++. .+|. |.+|..|++++++.|.|.....+....++++..||+.+|+++ ..|+.
T Consensus 196 ~-tlP~~lg~l~~L~~LyL~~Nki~-~lPe--f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde 270 (565)
T KOG0472|consen 196 E-TLPPELGGLESLELLYLRRNKIR-FLPE--FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDE 270 (565)
T ss_pred h-cCChhhcchhhhHHHHhhhcccc-cCCC--CCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchH
Confidence 6 67888888888888888888887 7773 678888888888888887544444557888888888888888 67888
Q ss_pred ccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCC---CCcEE-------EccCCc------
Q 005619 257 LLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLA---ILQIL-------DISENN------ 320 (688)
Q Consensus 257 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~---~L~~L-------~Ls~n~------ 320 (688)
+.-+.+|.+||+|+|.++ ..|..++++ +|+.|.+.+|.+..+ ...+-+.. -|++| .++..+
T Consensus 271 ~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI-RREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH-HHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 888888888888888888 567778888 888888888876522 11111110 01111 111110
Q ss_pred ---CccccccccccCccceEeeecCccccCCchhccCCCC---ccEEeCcCCcCCCcCchhhhcCCCccE-EeccCCcCC
Q 005619 321 ---LSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSA---LETLDLRDNYFFGRIPHQINEHSNLRA-LLLRGNYLQ 393 (688)
Q Consensus 321 ---l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~---L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~L~~n~l~ 393 (688)
..+..+......+.+.|++++-+++ .+|...+.... .+..+++.|++ .++|..+..+..+.+ +.+++|.+
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL-~elPk~L~~lkelvT~l~lsnn~i- 424 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQL-CELPKRLVELKELVTDLVLSNNKI- 424 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchH-hhhhhhhHHHHHHHHHHHhhcCcc-
Confidence 0111122224567888999998888 66766555433 78999999999 567877777766554 44555555
Q ss_pred CCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCC
Q 005619 394 GPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLG 473 (688)
Q Consensus 394 ~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 473 (688)
+.+|..++.+++|..|++++|.+. .+|..++.
T Consensus 425 sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~----------------------------------------------- 456 (565)
T KOG0472|consen 425 SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS----------------------------------------------- 456 (565)
T ss_pred ccchHHHHhhhcceeeecccchhh-hcchhhhh-----------------------------------------------
Confidence 588999999999999999999886 77776654
Q ss_pred cceEEEeeeccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCC
Q 005619 474 TQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHN 553 (688)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (688)
+..|+.||+|+|++. .+|..+..+..++.+-.++|++....|+.+++|.+|..|||.+|
T Consensus 457 --------------------lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nN 515 (565)
T KOG0472|consen 457 --------------------LVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNN 515 (565)
T ss_pred --------------------hhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCC
Confidence 345899999999998 88999999999999999999999888888999999999999999
Q ss_pred cccccCCcCCCCCCCCCEEecCCCcCc
Q 005619 554 KLNGQIPPQLTELHSLSKFDVSYNDLS 580 (688)
Q Consensus 554 ~l~~~~p~~l~~l~~L~~L~ls~N~l~ 580 (688)
.+. .+|+.+++|++|++|++++|++.
T Consensus 516 dlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 516 DLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred chh-hCChhhccccceeEEEecCCccC
Confidence 999 78999999999999999999998
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=321.04 Aligned_cols=374 Identities=21% Similarity=0.233 Sum_probs=328.1
Q ss_pred CCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEe
Q 005619 164 PKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLY 243 (688)
Q Consensus 164 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 243 (688)
+.-+.|++++|++....+..|.++++|+.+++..|.++ .+|... ....+|+.|+|.+|.|+....+.+..++.|++||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~-~~sghl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFG-HESGHLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccc-ccccceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 45678999999999999999999999999999999998 888743 4455799999999999988888999999999999
Q ss_pred ccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 005619 244 LDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSG 323 (688)
Q Consensus 244 L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 323 (688)
|+.|.|+......|..-.++++|+|++|.|+......|..+.+|..|.|+.|+++...+..|.++++|+.|+|..|+|..
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri 235 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI 235 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee
Confidence 99999997766777777899999999999999999999999999999999999998889999999999999999999987
Q ss_pred cccccc-ccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcC
Q 005619 324 SMISTL-NLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQ 402 (688)
Q Consensus 324 ~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 402 (688)
.....| ++++|+.|.+..|.+...-...|..+.++++|+|..|+++..-..++.++++|+.|+++.|.|..+-++.+..
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 655555 9999999999999999777889999999999999999998888889999999999999999999888999999
Q ss_pred CCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeee
Q 005619 403 LRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMT 482 (688)
Q Consensus 403 l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 482 (688)
+++|+.|||++|+|+...+..+..
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~-------------------------------------------------------- 339 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRV-------------------------------------------------------- 339 (873)
T ss_pred cccceeEeccccccccCChhHHHH--------------------------------------------------------
Confidence 999999999999999655555543
Q ss_pred ccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCc---cccCCCCCCeEeCCCCcccccC
Q 005619 483 KNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPE---SFSNLKMIESLDLSHNKLNGQI 559 (688)
Q Consensus 483 ~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~ 559 (688)
+..|++|+|++|.++......|..+++|+.|||++|.++..|.+ .|.+|++|+.|+|.+|++..+.
T Consensus 340 -----------L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~ 408 (873)
T KOG4194|consen 340 -----------LSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIP 408 (873)
T ss_pred -----------HHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecc
Confidence 56788999999999988889999999999999999999977654 5889999999999999999877
Q ss_pred CcCCCCCCCCCEEecCCCcCccCCCCCcccCCcCccccCCCCCCCCC
Q 005619 560 PPQLTELHSLSKFDVSYNDLSGPIPDKEQFSTFDESSYRGNLHLCGP 606 (688)
Q Consensus 560 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~ 606 (688)
..+|..++.|+.|||.+|.+...-|..-.-..+.+..+..-..+|++
T Consensus 409 krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 409 KRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred hhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEec
Confidence 78999999999999999999876555411113333333333446654
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.8e-41 Score=322.36 Aligned_cols=468 Identities=24% Similarity=0.323 Sum_probs=381.1
Q ss_pred CCCCCCcccCchhhcCCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCC
Q 005619 1 MSSNQLSGILPSVIANLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCN 80 (688)
Q Consensus 1 Ls~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~ 80 (688)
|++|.++... ..+.++..|++|++++|.+.. .| .+++.+..++.++.++|.... ++ +.+..+.+|+.++++.|.
T Consensus 52 ls~N~l~~l~-~dl~nL~~l~vl~~~~n~l~~--lp-~aig~l~~l~~l~vs~n~ls~-lp-~~i~s~~~l~~l~~s~n~ 125 (565)
T KOG0472|consen 52 LSHNDLEVLR-EDLKNLACLTVLNVHDNKLSQ--LP-AAIGELEALKSLNVSHNKLSE-LP-EQIGSLISLVKLDCSSNE 125 (565)
T ss_pred hccCchhhcc-HhhhcccceeEEEeccchhhh--CC-HHHHHHHHHHHhhcccchHhh-cc-HHHhhhhhhhhhhccccc
Confidence 4677777664 468999999999999999984 66 578999999999999987643 33 247788899999999999
Q ss_pred CCCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCC-CCCCcCEEEccCCCCCCCCChhh
Q 005619 81 LGVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTS-AQHGLISLDISSNNFTGKLPQNM 159 (688)
Q Consensus 81 l~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~~L~~L~ls~n~~~~~~~~~~ 159 (688)
+.++|+.++.+..|+.++..+|+++ ..|..++ .+.+|..+++.+|++...+... .++.|++||.-.|.++ .+|..+
T Consensus 126 ~~el~~~i~~~~~l~dl~~~~N~i~-slp~~~~-~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~l 202 (565)
T KOG0472|consen 126 LKELPDSIGRLLDLEDLDATNNQIS-SLPEDMV-NLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPEL 202 (565)
T ss_pred eeecCchHHHHhhhhhhhccccccc-cCchHHH-HHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhh
Confidence 9999999999999999999999998 7888775 8999999999999998764332 6889999999999998 999999
Q ss_pred hhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCC
Q 005619 160 GIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRL 239 (688)
Q Consensus 160 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 239 (688)
+ .+.+|+.|++..|++. ..| .|.++..|++|.++.|.+. .+|.....+++++..||+..|+++ ..|+.+.-+++|
T Consensus 203 g-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL 277 (565)
T KOG0472|consen 203 G-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSL 277 (565)
T ss_pred c-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhh
Confidence 8 7999999999999998 566 7999999999999999998 899999889999999999999998 468888889999
Q ss_pred CEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhC-----CcCCcE----EEcccccc----CCC-Cc---
Q 005619 240 LFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGN-----FSNLYI----LSMSKNLL----EGN-IP--- 302 (688)
Q Consensus 240 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~-----l~~L~~----L~l~~n~l----~~~-~~--- 302 (688)
+.||+++|.++ ..|..++++ .|+.|-+.+|.+..+-.+.+.. ++.|+. =-++...- ... .+
T Consensus 278 ~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~ 355 (565)
T KOG0472|consen 278 ERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESF 355 (565)
T ss_pred hhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcc
Confidence 99999999999 577788988 9999999999875221111110 111211 00111100 000 11
Q ss_pred ccccCCCCCcEEEccCCcCccccccccccC---ccceEeeecCccccCCchhccCCCCcc-EEeCcCCcCCCcCchhhhc
Q 005619 303 VQFNNLAILQILDISENNLSGSMISTLNLS---SVEHLYLQSNALGGSIPNTIFRGSALE-TLDLRDNYFFGRIPHQINE 378 (688)
Q Consensus 303 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~L~-~L~l~~n~l~~~~~~~~~~ 378 (688)
.....+.+.+.|++++-+++..+...|... -.+..+++.|++. ++|..+..+..+. .+++++|.+ +-+|..+..
T Consensus 356 ~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~ 433 (565)
T KOG0472|consen 356 PDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQ 433 (565)
T ss_pred cchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHh
Confidence 122345678899999999998888777333 3789999999998 8888877765554 455666665 778889999
Q ss_pred CCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEeccccccccccccc
Q 005619 379 HSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNS 458 (688)
Q Consensus 379 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (688)
+++|+.|++++|.+. .+|..++.+..|+.||+|.|++. .+|.|+..+
T Consensus 434 l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~l------------------------------- 480 (565)
T KOG0472|consen 434 LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYEL------------------------------- 480 (565)
T ss_pred hhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhH-------------------------------
Confidence 999999999999998 78889999999999999999997 677776432
Q ss_pred ceecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCcc
Q 005619 459 TVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPES 538 (688)
Q Consensus 459 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 538 (688)
..++.+-.++|++....|+.+.++.+|+.|||.+|.+. .+|..
T Consensus 481 ------------------------------------q~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~ 523 (565)
T KOG0472|consen 481 ------------------------------------QTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPI 523 (565)
T ss_pred ------------------------------------HHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChh
Confidence 23444555678888777777999999999999999999 78999
Q ss_pred ccCCCCCCeEeCCCCccc
Q 005619 539 FSNLKMIESLDLSHNKLN 556 (688)
Q Consensus 539 ~~~l~~L~~L~Ls~N~l~ 556 (688)
++++++|++|+|++|.++
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 999999999999999999
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=314.15 Aligned_cols=472 Identities=28% Similarity=0.354 Sum_probs=285.6
Q ss_pred CchhhcCCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcchhhh
Q 005619 10 LPSVIANLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPNFLL 89 (688)
Q Consensus 10 ~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~~~ 89 (688)
+|..+-.-..++.|+++.|.+.. .|.+...+..+|+.||++.|... ..+. .+..+++|+.|+++.|.+..+|.+..
T Consensus 13 ip~~i~~~~~~~~ln~~~N~~l~--~pl~~~~~~v~L~~l~lsnn~~~-~fp~-~it~l~~L~~ln~s~n~i~~vp~s~~ 88 (1081)
T KOG0618|consen 13 IPEQILNNEALQILNLRRNSLLS--RPLEFVEKRVKLKSLDLSNNQIS-SFPI-QITLLSHLRQLNLSRNYIRSVPSSCS 88 (1081)
T ss_pred cchhhccHHHHHhhhcccccccc--CchHHhhheeeeEEeeccccccc-cCCc-hhhhHHHHhhcccchhhHhhCchhhh
Confidence 34444444447777777776553 33445566666777777766543 2222 25556677777777777777777777
Q ss_pred CCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCC-CCCCcCEEEccCCCCCCCCChhhhhcCCCCCE
Q 005619 90 HQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTS-AQHGLISLDISSNNFTGKLPQNMGIVLPKLDC 168 (688)
Q Consensus 90 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~ 168 (688)
+..+|+++.|.+|.+. ..|..+ ..+++|+.|+++.|.+...+..- .+..++.+..++|.-...++ -..++.
T Consensus 89 ~~~~l~~lnL~~n~l~-~lP~~~-~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg------~~~ik~ 160 (1081)
T KOG0618|consen 89 NMRNLQYLNLKNNRLQ-SLPASI-SELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLG------QTSIKK 160 (1081)
T ss_pred hhhcchhheeccchhh-cCchhH-HhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhc------cccchh
Confidence 7777777777777766 666654 46677777777777776654332 55556666666662111111 112566
Q ss_pred EEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCc
Q 005619 169 MNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNH 248 (688)
Q Consensus 169 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 248 (688)
+++..|.+.+.++..+..++. .|+|.+|.+. ... ...+.+|+.|....|.+.... ..-++++.|+.+.|.
T Consensus 161 ~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~d---ls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~ 230 (1081)
T KOG0618|consen 161 LDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLD---LSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNP 230 (1081)
T ss_pred hhhhhhhcccchhcchhhhhe--eeecccchhh-hhh---hhhccchhhhhhhhcccceEE----ecCcchheeeeccCc
Confidence 666666666666666665555 5777777654 222 345666666666666655321 123567777777776
Q ss_pred CCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccccccc
Q 005619 249 FSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMIST 328 (688)
Q Consensus 249 l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 328 (688)
+....+. ....+|+++++++|+++ ..|+|++.+.+|+.++..+|++. .+|..+....+|+.|.+..|.+...++..
T Consensus 231 l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~l 306 (1081)
T KOG0618|consen 231 LTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFL 306 (1081)
T ss_pred ceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcc
Confidence 6632222 22346777777777776 34577777777777777777774 55666666677777777777776655554
Q ss_pred cccCccceEeeecCccccCCchhccCC--CCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCC
Q 005619 329 LNLSSVEHLYLQSNALGGSIPNTIFRG--SALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKL 406 (688)
Q Consensus 329 ~~~~~L~~L~L~~n~l~~~~~~~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 406 (688)
-..++|++|+|..|.+. ..|+.+..- ..|+.|+.+.|++.......=..++.|+.|.+.+|.+++..-..+.+..+|
T Consensus 307 e~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 307 EGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred cccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 46677777777777776 455433322 225566666666643321122234567777777777776665566667777
Q ss_pred CEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeecccc
Q 005619 407 SIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRY 486 (688)
Q Consensus 407 ~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 486 (688)
+.|+|++|++. ++|...-
T Consensus 386 KVLhLsyNrL~-~fpas~~------------------------------------------------------------- 403 (1081)
T KOG0618|consen 386 KVLHLSYNRLN-SFPASKL------------------------------------------------------------- 403 (1081)
T ss_pred eeeeecccccc-cCCHHHH-------------------------------------------------------------
Confidence 77777777775 4444221
Q ss_pred ccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCC
Q 005619 487 ESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTEL 566 (688)
Q Consensus 487 ~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 566 (688)
..+..|+.|+||+|.++ .+|..+..+..|++|...+|++. ..| .+..+++|+.+|+|.|+++...-..-..-
T Consensus 404 -----~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 404 -----RKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred -----hchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 11445666777777777 55677777777777777777776 555 66777777777777777764332222222
Q ss_pred CCCCEEecCCCc
Q 005619 567 HSLSKFDVSYND 578 (688)
Q Consensus 567 ~~L~~L~ls~N~ 578 (688)
++|++||+++|.
T Consensus 476 p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 476 PNLKYLDLSGNT 487 (1081)
T ss_pred cccceeeccCCc
Confidence 677777777775
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-36 Score=311.55 Aligned_cols=467 Identities=27% Similarity=0.343 Sum_probs=378.3
Q ss_pred hhhcCCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcchhhhCC
Q 005619 12 SVIANLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPNFLLHQ 91 (688)
Q Consensus 12 ~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l 91 (688)
++..+.-+|++||+++|.+.. .| ..+..+.+|+.|+++.|.+ ...+ .++.++.+|+++.|.+|.+..+|..+..+
T Consensus 39 ~~~~~~v~L~~l~lsnn~~~~--fp-~~it~l~~L~~ln~s~n~i-~~vp-~s~~~~~~l~~lnL~~n~l~~lP~~~~~l 113 (1081)
T KOG0618|consen 39 EFVEKRVKLKSLDLSNNQISS--FP-IQITLLSHLRQLNLSRNYI-RSVP-SSCSNMRNLQYLNLKNNRLQSLPASISEL 113 (1081)
T ss_pred HHhhheeeeEEeecccccccc--CC-chhhhHHHHhhcccchhhH-hhCc-hhhhhhhcchhheeccchhhcCchhHHhh
Confidence 345566669999999999985 55 3577889999999998764 3344 45888999999999999999999999999
Q ss_pred CCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCC-CCCCCCCCCCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEE
Q 005619 92 FNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNN-SFSGFQLTSAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMN 170 (688)
Q Consensus 92 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~ 170 (688)
++|++||+++|++. .+|..+ ..+..++.+..++| ++... .-..++.+++..|.+.+.++.++. .+.. .|+
T Consensus 114 knl~~LdlS~N~f~-~~Pl~i-~~lt~~~~~~~s~N~~~~~l----g~~~ik~~~l~~n~l~~~~~~~i~-~l~~--~ld 184 (1081)
T KOG0618|consen 114 KNLQYLDLSFNHFG-PIPLVI-EVLTAEEELAASNNEKIQRL----GQTSIKKLDLRLNVLGGSFLIDIY-NLTH--QLD 184 (1081)
T ss_pred hcccccccchhccC-CCchhH-HhhhHHHHHhhhcchhhhhh----ccccchhhhhhhhhcccchhcchh-hhhe--eee
Confidence 99999999999997 888876 48899999999999 22222 112288999999999888887775 3444 699
Q ss_pred ccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCC
Q 005619 171 ISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFS 250 (688)
Q Consensus 171 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 250 (688)
|.+|.+. -..+..+.+|+.+....|.+. .+. ..-++|+.|+.++|.++...+. ..-.+|++++++.|+++
T Consensus 185 Lr~N~~~---~~dls~~~~l~~l~c~rn~ls-~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~ 254 (1081)
T KOG0618|consen 185 LRYNEME---VLDLSNLANLEVLHCERNQLS-ELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS 254 (1081)
T ss_pred cccchhh---hhhhhhccchhhhhhhhcccc-eEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhh
Confidence 9999887 235678899999999999887 333 2346899999999998843222 22358999999999999
Q ss_pred CcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCcccccccc-
Q 005619 251 GKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTL- 329 (688)
Q Consensus 251 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~- 329 (688)
.+|+++..+.+|+.++..+|.++ ..|..+....+|+.|.+..|.++ -+|...+.+++|++|+|..|++...+...+
T Consensus 255 -~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~ 331 (1081)
T KOG0618|consen 255 -NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLA 331 (1081)
T ss_pred -cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHh
Confidence 56699999999999999999996 77888888999999999999998 566678889999999999999998777555
Q ss_pred -ccCccceEeeecCccccCCch-hccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCC
Q 005619 330 -NLSSVEHLYLQSNALGGSIPN-TIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLS 407 (688)
Q Consensus 330 -~~~~L~~L~L~~n~l~~~~~~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 407 (688)
-..+|+.++.+.|++. ..|. .-...+.|+.|.+.+|.+++..-..+.+...|+.|+|++|++.......+.++..|+
T Consensus 332 v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~Le 410 (1081)
T KOG0618|consen 332 VLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELE 410 (1081)
T ss_pred hhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhH
Confidence 2334788888888887 3442 223347899999999999988777889999999999999999966667789999999
Q ss_pred EEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccc
Q 005619 408 IMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYE 487 (688)
Q Consensus 408 ~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (688)
.|++|+|+++ .+|.++.++
T Consensus 411 eL~LSGNkL~-~Lp~tva~~------------------------------------------------------------ 429 (1081)
T KOG0618|consen 411 ELNLSGNKLT-TLPDTVANL------------------------------------------------------------ 429 (1081)
T ss_pred HHhcccchhh-hhhHHHHhh------------------------------------------------------------
Confidence 9999999998 788877653
Q ss_pred cccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccC-CCccccCCCCCCeEeCCCCcccccCCcCCCCC
Q 005619 488 SYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGS-IPESFSNLKMIESLDLSHNKLNGQIPPQLTEL 566 (688)
Q Consensus 488 ~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 566 (688)
..|++|...+|++. ..| ++..++.|+.+|+|.|+++.. +|..... ++|++|||++|.-.......|..+
T Consensus 430 -------~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l 499 (1081)
T KOG0618|consen 430 -------GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVL 499 (1081)
T ss_pred -------hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHh
Confidence 45777888888887 667 899999999999999999854 3444333 899999999998555666777788
Q ss_pred CCCCEEecCCC
Q 005619 567 HSLSKFDVSYN 577 (688)
Q Consensus 567 ~~L~~L~ls~N 577 (688)
+++...++.-|
T Consensus 500 ~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 500 KSLSQMDITLN 510 (1081)
T ss_pred hhhhheecccC
Confidence 88888888777
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=6.7e-35 Score=291.80 Aligned_cols=321 Identities=26% Similarity=0.359 Sum_probs=242.6
Q ss_pred CCcceeEEECCCCCCCCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCCCCCCcCEEEc
Q 005619 67 PTFQLKVLSLPNCNLGVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTSAQHGLISLDI 146 (688)
Q Consensus 67 ~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~l 146 (688)
.+++++.|.|...++..+|+.++.+.+|++|.+++|++. .+...+ ..++.|+.+.+.+|++...
T Consensus 30 qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~-~vhGEL-s~Lp~LRsv~~R~N~LKns-------------- 93 (1255)
T KOG0444|consen 30 QMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLI-SVHGEL-SDLPRLRSVIVRDNNLKNS-------------- 93 (1255)
T ss_pred HhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhH-hhhhhh-ccchhhHHHhhhccccccC--------------
Confidence 344455555666677788888888888888888888886 443333 4677777777777776653
Q ss_pred cCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCC
Q 005619 147 SSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFD 226 (688)
Q Consensus 147 s~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~ 226 (688)
-+|..+| .+..|..|+||+|++. ..|..+..-+++-+|+|++|+|. .||...|.++..|-.|||++|++.
T Consensus 94 -------GiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 94 -------GIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred -------CCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh
Confidence 5777777 6888888888888888 57888888888888999999887 888888888888888999988887
Q ss_pred CcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCC-CCCchhhhCCcCCcEEEccccccCCCCcccc
Q 005619 227 GQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLS-GHIPSWMGNFSNLYILSMSKNLLEGNIPVQF 305 (688)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 305 (688)
..|+....+..|++|+|++|.+.......+..+++|+.|.+++.+-+ ..+|..+..+.+|..++++.|.+. ..|+++
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 45777788888888888888776544444555677888888876544 456777888888888888888887 778888
Q ss_pred cCCCCCcEEEccCCcCccccccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCC-cCchhhhcCCCccE
Q 005619 306 NNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFG-RIPHQINEHSNLRA 384 (688)
Q Consensus 306 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~ 384 (688)
..+++|+.|+||+|+++......-...+|++|+++.|+++ .+|..++.++.|+.|.+.+|+++- -+|+.++.+.+|+.
T Consensus 242 y~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Lev 320 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEV 320 (1255)
T ss_pred hhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHH
Confidence 8888888888888888765444335567777777777777 777777777777777777777643 35677777777777
Q ss_pred EeccCCcCCCCCchhhcCCCCCCEEEccCCcCc
Q 005619 385 LLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLN 417 (688)
Q Consensus 385 L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~ 417 (688)
+...+|.+. ..|+.+|.|..|+.|.|++|++.
T Consensus 321 f~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 321 FHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred HHhhccccc-cCchhhhhhHHHHHhccccccee
Confidence 777777775 67777777777777777777664
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=4.7e-34 Score=285.75 Aligned_cols=383 Identities=23% Similarity=0.289 Sum_probs=314.3
Q ss_pred CCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcchhhhCCCCCC
Q 005619 16 NLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPNFLLHQFNLK 95 (688)
Q Consensus 16 ~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~ 95 (688)
-++..+-.|+++|.++|..+| .....+++++.|.|....+ ..+|. .++.+.+|++|.+++|++.++-..+..++.|+
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP-~~v~qMt~~~WLkLnrt~L-~~vPe-EL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFP-HDVEQMTQMTWLKLNRTKL-EQVPE-ELSRLQKLEHLSMAHNQLISVHGELSDLPRLR 81 (1255)
T ss_pred ccceeecccccCCcCCCCcCc-hhHHHhhheeEEEechhhh-hhChH-HHHHHhhhhhhhhhhhhhHhhhhhhccchhhH
Confidence 355677789999999876788 6788899999998876543 23333 37778889999999999988877788899999
Q ss_pred EEECCCCcCCC-CCchHHhhCCCCCcEEEccCCCCCCCCCC-CCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccC
Q 005619 96 YLDLSHNKLAG-NFPTWLLENNTKLEVLYLTNNSFSGFQLT-SAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISK 173 (688)
Q Consensus 96 ~L~Ls~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~ 173 (688)
.+++..|+++. -+|..+| ++..|..|||++|+++..+-. ..-+++-.|+||+|+|. .||..++.+++.|-.|+||+
T Consensus 82 sv~~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHhhhccccccCCCCchhc-ccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcccc
Confidence 99999998863 4788887 889999999999998875432 25577889999999998 99999999999999999999
Q ss_pred CCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCC-CcCcccccCCCCCCEEeccCCcCCCc
Q 005619 174 NSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFD-GQIFPNYVNLTRLLFLYLDNNHFSGK 252 (688)
Q Consensus 174 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 252 (688)
|++. .+|+.+..+..|++|+|++|.+. ......+..+++|+.|.+++.+-+ ..+|.++..+.+|..+|++.|.+. .
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~-hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~ 236 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLN-HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-I 236 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhh-HHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-c
Confidence 9998 67888999999999999999876 333333445678888899887544 467888999999999999999998 8
Q ss_pred ccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCc--cccccccc
Q 005619 253 IKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLS--GSMISTLN 330 (688)
Q Consensus 253 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~--~~~~~~~~ 330 (688)
.|+.+..+++|+.|+||+|.++ ..........+|++|+++.|+++ .+|.+++.+++|+.|.+.+|+++ |++.....
T Consensus 237 vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGK 314 (1255)
T KOG0444|consen 237 VPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGK 314 (1255)
T ss_pred chHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhh
Confidence 8999999999999999999998 44445566688999999999998 78999999999999999999876 44444448
Q ss_pred cCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEE
Q 005619 331 LSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMD 410 (688)
Q Consensus 331 ~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 410 (688)
+.+|+++...+|.+. ..|+.++.|..|+.|.|+.|++ -.+|+.+.-++.|+.|+++.|.--...|..-..-++|+.-+
T Consensus 315 L~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrL-iTLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYN 392 (1255)
T KOG0444|consen 315 LIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRL-ITLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYN 392 (1255)
T ss_pred hhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccce-eechhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeee
Confidence 899999999999998 8999999999999999999998 45789999999999999999976645554332224444433
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-27 Score=227.16 Aligned_cols=408 Identities=18% Similarity=0.184 Sum_probs=267.2
Q ss_pred CCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccC-CcCccccCchhhcCCCCCC
Q 005619 138 QHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSS-NKFAGELSQSPVTNCFSLE 216 (688)
Q Consensus 138 ~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~~l~~L~ 216 (688)
.+.-.+++|..|+|+ .+|...|+.+++|+.|||++|.|+.+.|++|.+++++..|-+.+ |+|+ .+|...|.++.+++
T Consensus 66 P~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slq 143 (498)
T KOG4237|consen 66 PPETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQ 143 (498)
T ss_pred CCcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHH
Confidence 345677888888888 89999999999999999999999999999999999988887766 8888 89999999999999
Q ss_pred EEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCC------------CCCchhhhCC
Q 005619 217 WLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLS------------GHIPSWMGNF 284 (688)
Q Consensus 217 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~------------~~~~~~~~~l 284 (688)
.|.+.-|++.......|..++++..|.+.+|.+..+-...+..+..++.+.+..|.+. ...|..++..
T Consensus 144 rLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsga 223 (498)
T KOG4237|consen 144 RLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGA 223 (498)
T ss_pred HHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccc
Confidence 9999999999888889999999999999999988555557888899999999888732 1122233333
Q ss_pred cCCcEEEccccccCCCCcccccCC-CCCcEEEccCCcCccccc-ccc-ccCccceEeeecCccccCCchhccCCCCccEE
Q 005619 285 SNLYILSMSKNLLEGNIPVQFNNL-AILQILDISENNLSGSMI-STL-NLSSVEHLYLQSNALGGSIPNTIFRGSALETL 361 (688)
Q Consensus 285 ~~L~~L~l~~n~l~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~~-~~~-~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 361 (688)
....-..+.+.++..+.+..|... ..+..--.+.+...+..| ..| .+++|+.|++++|++++.-+.+|.....+++|
T Consensus 224 rc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL 303 (498)
T KOG4237|consen 224 RCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQEL 303 (498)
T ss_pred eecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhh
Confidence 334444444555544444433221 111111122232333333 334 78889999999999988888888888889999
Q ss_pred eCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccce
Q 005619 362 DLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFV 441 (688)
Q Consensus 362 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~ 441 (688)
.|..|++...-...|.++..|+.|+|.+|+|+...|.+|..+..|..|.+-.|++....- +..+..|..... ..+.+
T Consensus 304 ~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~--l~wl~~Wlr~~~-~~~~~ 380 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR--LAWLGEWLRKKS-VVGNP 380 (498)
T ss_pred hcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc--hHHHHHHHhhCC-CCCCC
Confidence 999998876666778888999999999999988888889889999999998888753221 111111211111 01100
Q ss_pred -------eEEecccccccccccc-cceecccCCCCCCCCCcceEEEeeeccccccccccccccccE-EEccCCcccccCC
Q 005619 442 -------MVVMDLGVADIRNYYN-STVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAG-LDLSSNKLTGDIP 512 (688)
Q Consensus 442 -------~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~-LdLs~N~l~~~~p 512 (688)
...++++......... ...+.........+ ...+-+.+ ...|+..++ .+|
T Consensus 381 ~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP--------------------~~c~c~~tVvRcSnk~lk-~lp 439 (498)
T KOG4237|consen 381 RCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCP--------------------PPCTCLDTVVRCSNKLLK-LLP 439 (498)
T ss_pred CCCCCchhccccchhccccccccCCccccCCCCCCCCC--------------------CCcchhhhhHhhcccchh-hcC
Confidence 0111111110000000 00000000000000 00111211 233444443 333
Q ss_pred hhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecCCC
Q 005619 513 SEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVSYN 577 (688)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 577 (688)
..+ -..-+.|++.+|.++ .+|.. .+++| .+|+|+|+++...-..|.++++|.+|-+|+|
T Consensus 440 ~~i--P~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 440 RGI--PVDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CCC--CchhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 322 124556778888887 56665 56677 7888888887666677888888888888876
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=4e-23 Score=242.96 Aligned_cols=341 Identities=21% Similarity=0.207 Sum_probs=199.6
Q ss_pred CChhhhhcCCCCCEEEccCCC------CCcccchhhhcCC-CCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCC
Q 005619 155 LPQNMGIVLPKLDCMNISKNS------FEGNIPSSIGKMQ-GLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDG 227 (688)
Q Consensus 155 ~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~ 227 (688)
+....+..+++|+.|.+..+. +...+|..+..++ +|+.|++.++.+. .+|..+ ...+|+.|++.+|.+..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLEK 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCccccc
Confidence 334445567777777665442 2223455555543 4777777777665 566543 35677777777776653
Q ss_pred cCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccC
Q 005619 228 QIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNN 307 (688)
Q Consensus 228 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 307 (688)
.+..+..+++|+.|+++++.....+|. +..+++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+ +
T Consensus 626 -L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 626 -LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred -cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-C
Confidence 455566677777777776654434443 5666777777777776555667777777777777777764444555444 5
Q ss_pred CCCCcEEEccCCcCccccccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCC-------CcCchhhhcCC
Q 005619 308 LAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFF-------GRIPHQINEHS 380 (688)
Q Consensus 308 l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~-------~~~~~~~~~l~ 380 (688)
+++|+.|++++|......+. ..++|++|++++|.+. .+|..+ .+++|+.|++.++... ...+......+
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~--~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~ 778 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPD--ISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSP 778 (1153)
T ss_pred CCCCCEEeCCCCCCcccccc--ccCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccc
Confidence 67777777777754433332 2356777777777765 455443 4566676766653321 11122223345
Q ss_pred CccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccce
Q 005619 381 NLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTV 460 (688)
Q Consensus 381 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (688)
+|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~------------------------------------ 822 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI------------------------------------ 822 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC------------------------------------
Confidence 67777777776666677777777777777777765444444321
Q ss_pred ecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCcccc
Q 005619 461 QLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFS 540 (688)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 540 (688)
.+++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|..++
T Consensus 823 --------------------------------~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~ 866 (1153)
T PLN03210 823 --------------------------------NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIE 866 (1153)
T ss_pred --------------------------------CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHh
Confidence 0345555666655443333332 245556666666665 4555566
Q ss_pred CCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecCCC
Q 005619 541 NLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVSYN 577 (688)
Q Consensus 541 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 577 (688)
.+++|+.|+|++|+--..+|..+..+++|+.+++++|
T Consensus 867 ~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 867 KFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 6666666666653322234555555566666666555
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2e-22 Score=237.14 Aligned_cols=337 Identities=20% Similarity=0.227 Sum_probs=187.8
Q ss_pred hHHhhCCCCCcEEEccCCCCCCC-----CCCC----CCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCccc
Q 005619 110 TWLLENNTKLEVLYLTNNSFSGF-----QLTS----AQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNI 180 (688)
Q Consensus 110 ~~~~~~l~~L~~L~L~~n~l~~~-----~~~~----~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 180 (688)
...|.++++|+.|.+..+..... ..+. ...+|+.|.+.++.+. .+|..+ ...+|++|++.++.+. .+
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCcccc-cc
Confidence 34455667777766655432210 0111 1234555555555544 444443 2445555555555544 23
Q ss_pred chhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCC
Q 005619 181 PSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRS 260 (688)
Q Consensus 181 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 260 (688)
+..+..+++|+.|+++++.....+|. +..+++|+.|++++|.....+|..+..+++|+.|++++|
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c------------- 691 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRC------------- 691 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCC-------------
Confidence 44444555555555554432223432 234445555555544433344444444455555555444
Q ss_pred CCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccccccccccCccceEeee
Q 005619 261 SELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQ 340 (688)
Q Consensus 261 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~ 340 (688)
.....+|..+ ++++|+.|++++|...+..|.. ..+|++|++++|.+... |....+++|++|++.
T Consensus 692 -----------~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~~l~~L~~L~l~ 755 (1153)
T PLN03210 692 -----------ENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNLRLENLDELILC 755 (1153)
T ss_pred -----------CCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-ccccccccccccccc
Confidence 3322333322 3444555555444332222221 23445555555554432 222234455555554
Q ss_pred cCccc-------cCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccC
Q 005619 341 SNALG-------GSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSH 413 (688)
Q Consensus 341 ~n~l~-------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~ 413 (688)
++... ...+.....+++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++
T Consensus 756 ~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~ 834 (1153)
T PLN03210 756 EMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSG 834 (1153)
T ss_pred ccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCC
Confidence 43211 1111122234678888888887777788888888888888888876555677665 688888888888
Q ss_pred CcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccccccc
Q 005619 414 NRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVI 493 (688)
Q Consensus 414 n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (688)
|.....+|..
T Consensus 835 c~~L~~~p~~---------------------------------------------------------------------- 844 (1153)
T PLN03210 835 CSRLRTFPDI---------------------------------------------------------------------- 844 (1153)
T ss_pred CCcccccccc----------------------------------------------------------------------
Confidence 7643333221
Q ss_pred cccccEEEccCCcccccCChhhhccCCCCeeeCCCC-cCccCCCccccCCCCCCeEeCCCCc
Q 005619 494 LDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHN-FLSGSIPESFSNLKMIESLDLSHNK 554 (688)
Q Consensus 494 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (688)
..+++.|+|++|.++ .+|..+..+++|+.|+|++| +++ .+|..+..+++|+.+++++|.
T Consensus 845 ~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 845 STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 245778888888887 67888888889999999884 455 577778888888888888874
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-25 Score=214.98 Aligned_cols=392 Identities=18% Similarity=0.219 Sum_probs=262.8
Q ss_pred EEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEccc
Q 005619 143 SLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSN 222 (688)
Q Consensus 143 ~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 222 (688)
..+-++-.++ ++|..+. +.-..++|..|.|+.+.+.+|+.+++|+.|||++|.|+ .|.+.+|.++.++.+|-+.+
T Consensus 50 ~VdCr~~GL~-eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred eEEccCCCcc-cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhc
Confidence 3445555555 7777653 56778889999998888888889999999999999888 77777888888887776665
Q ss_pred -CcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccC---
Q 005619 223 -NNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLE--- 298 (688)
Q Consensus 223 -n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--- 298 (688)
|+|+......|.++..++.|.+.-|++.-...+.|..++++..|.+..|.+..+.-..|..+..++.+.+..|.+.
T Consensus 125 ~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdC 204 (498)
T KOG4237|consen 125 NNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDC 204 (498)
T ss_pred CCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccc
Confidence 8888777778888888888888888888777888888888888888888887554557788888888888777621
Q ss_pred ---------CCCcccccCCCCCcEEEccCCcCccccccccccC--ccceEeeecCccccCCc-hhccCCCCccEEeCcCC
Q 005619 299 ---------GNIPVQFNNLAILQILDISENNLSGSMISTLNLS--SVEHLYLQSNALGGSIP-NTIFRGSALETLDLRDN 366 (688)
Q Consensus 299 ---------~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~--~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~l~~n 366 (688)
...|..+++.....-..+.+.++..+....+.+. .+..--.+.+...+..| ..|..+++|++|++++|
T Consensus 205 nL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN 284 (498)
T KOG4237|consen 205 NLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNN 284 (498)
T ss_pred ccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCC
Confidence 1233445555555555566666666555555222 22222223333433444 35778899999999999
Q ss_pred cCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEec
Q 005619 367 YFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMD 446 (688)
Q Consensus 367 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~ 446 (688)
++++.-+.+|.+...++.|.|..|++...-...|.++..|+.|+|++|+|+..-|..|..+... ..+.
T Consensus 285 ~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l------------~~l~ 352 (498)
T KOG4237|consen 285 KITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL------------STLN 352 (498)
T ss_pred ccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee------------eeee
Confidence 9999999999999999999999999987777889999999999999999997777766543311 1111
Q ss_pred ccccccc--------cccccceecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccc---cCChhh
Q 005619 447 LGVADIR--------NYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTG---DIPSEI 515 (688)
Q Consensus 447 ~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~---~~p~~~ 515 (688)
+-.+... ..|.+... .-+ ..+-.....++.++++...+.. ..|++.
T Consensus 353 l~~Np~~CnC~l~wl~~Wlr~~~--~~~---------------------~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~ 409 (498)
T KOG4237|consen 353 LLSNPFNCNCRLAWLGEWLRKKS--VVG---------------------NPRCQSPGFVRQIPISDVAFGDFRCGGPEEL 409 (498)
T ss_pred hccCcccCccchHHHHHHHhhCC--CCC---------------------CCCCCCCchhccccchhccccccccCCcccc
Confidence 1111000 00000000 000 0000112334555555544321 122222
Q ss_pred h---------ccCCCC-eeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecCCCcCcc
Q 005619 516 C---------DLQNIH-GLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVSYNDLSG 581 (688)
Q Consensus 516 ~---------~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 581 (688)
+ .++-+. +..-|+..+. .+|..+. ..-..|.+.+|.++ .+|.+ .+.+| .+|+|+|+++-
T Consensus 410 ~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~ 478 (498)
T KOG4237|consen 410 GCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISS 478 (498)
T ss_pred CCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceeh
Confidence 1 122332 3445555555 5555442 34567999999999 67776 67788 99999999863
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=3.6e-21 Score=209.70 Aligned_cols=114 Identities=25% Similarity=0.278 Sum_probs=50.9
Q ss_pred CCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEcc
Q 005619 190 LRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDIS 269 (688)
Q Consensus 190 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls 269 (688)
-..|+++.+.++ .+|..+. ++|+.|++.+|+++. +|. ..++|++|++++|+++. +|.. .++|+.|+++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeecc
Confidence 445555555555 4454331 245555555555543 221 13455555555555542 2221 2345555555
Q ss_pred CCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 005619 270 NNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSG 323 (688)
Q Consensus 270 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 323 (688)
+|.++. +|.. ..+|+.|++++|+++. +|. ..++|+.|++++|++.+
T Consensus 271 ~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 271 SNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS 316 (788)
T ss_pred CCchhh-hhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc
Confidence 555442 2221 1344455555555542 222 12345555555555443
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=9.4e-21 Score=206.47 Aligned_cols=263 Identities=28% Similarity=0.338 Sum_probs=129.2
Q ss_pred eeEEECCCCCCCCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCC
Q 005619 71 LKVLSLPNCNLGVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNN 150 (688)
Q Consensus 71 L~~L~l~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~ 150 (688)
-..|+++++.++.+|..+. ++|+.|++++|+++ .+|. .+++|++|++++|+++.++ ...++|+.|++++|.
T Consensus 203 ~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~LtsLP--~lp~sL~~L~Ls~N~ 273 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTSLP--VLPPGLLELSIFSNP 273 (788)
T ss_pred CcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccCccc--CcccccceeeccCCc
Confidence 3456666666666665443 25666666666665 4443 2455666666666555432 233455555555555
Q ss_pred CCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCc
Q 005619 151 FTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIF 230 (688)
Q Consensus 151 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 230 (688)
++ .+|.. .++|+.|++++|+++. +|. ..++|+.|++++|.+. .+|.. ..+|+.|++++|.++.
T Consensus 274 L~-~Lp~l----p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~Ls~N~L~~--- 336 (788)
T PRK15387 274 LT-HLPAL----PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLA-SLPAL----PSELCKLWAYNNQLTS--- 336 (788)
T ss_pred hh-hhhhc----hhhcCEEECcCCcccc-ccc---cccccceeECCCCccc-cCCCC----cccccccccccCcccc---
Confidence 54 33331 2345555555555542 232 1244555555555554 23321 1234444444444442
Q ss_pred ccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCC
Q 005619 231 PNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAI 310 (688)
Q Consensus 231 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 310 (688)
+|.. ..+|+.|++++|++++ +|.. .++|+.|++++|.+.. +|.. ..+
T Consensus 337 ----------------------LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~ 383 (788)
T PRK15387 337 ----------------------LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSG 383 (788)
T ss_pred ----------------------cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccc
Confidence 2211 1244555555555542 2221 1344445555555542 2321 134
Q ss_pred CcEEEccCCcCccccccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCC
Q 005619 311 LQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGN 390 (688)
Q Consensus 311 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 390 (688)
|+.|++++|++++.+. ..++|+.|++++|.++ .+|.. ..+|+.|++++|+++ .+|..+..+++|+.|++++|
T Consensus 384 L~~LdLs~N~Lt~LP~---l~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N 455 (788)
T PRK15387 384 LKELIVSGNRLTSLPV---LPSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 455 (788)
T ss_pred cceEEecCCcccCCCC---cccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCC
Confidence 5555555555554322 1245566666666665 34432 234566666666664 45666666666666666666
Q ss_pred cCCCCCchhh
Q 005619 391 YLQGPIPHQL 400 (688)
Q Consensus 391 ~l~~~~~~~~ 400 (688)
++++..+..+
T Consensus 456 ~Ls~~~~~~L 465 (788)
T PRK15387 456 PLSERTLQAL 465 (788)
T ss_pred CCCchHHHHH
Confidence 6666555544
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=3.6e-19 Score=195.60 Aligned_cols=181 Identities=22% Similarity=0.344 Sum_probs=80.2
Q ss_pred CCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEcc
Q 005619 214 SLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMS 293 (688)
Q Consensus 214 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 293 (688)
+...|+++++.++. +|..+ .+.++.|++++|+++ .+|..+. .+|+.|++++|.++ .+|..+. ++|+.|+++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACI--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCccc--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 34556666655553 23322 135566666666655 2333322 35666666666555 2343332 345555555
Q ss_pred ccccCCCCcccccCCCCCcEEEccCCcCccccccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCc
Q 005619 294 KNLLEGNIPVQFNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIP 373 (688)
Q Consensus 294 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 373 (688)
+|.+. .+|..+. .+|+.|++++|++...+... .++|+.|++++|+++ .+|..+. ++|+.|++++|+++. +|
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l--~~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISCLPENL--PEELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCcccccc--CCCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-CC
Confidence 55555 3333332 24555555555554322211 134555555555444 2332221 234444444444432 22
Q ss_pred hhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCc
Q 005619 374 HQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLN 417 (688)
Q Consensus 374 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~ 417 (688)
..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++
T Consensus 321 ~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 321 ETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT 359 (754)
T ss_pred ccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC
Confidence 211 1344444444444442 333221 34444444444443
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.78 E-value=7.4e-19 Score=193.18 Aligned_cols=205 Identities=22% Similarity=0.357 Sum_probs=109.0
Q ss_pred CCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEcc
Q 005619 190 LRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDIS 269 (688)
Q Consensus 190 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls 269 (688)
...|+++++.++ .+|... .+.|+.|++++|.++. +|..+. ++|++|++++|.++ .+|..+ ..+|+.|+++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l--~~~L~~L~Ls 249 (754)
T PRK15370 180 KTELRLKILGLT-TIPACI---PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATL--PDTIQEMELS 249 (754)
T ss_pred ceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhh--hccccEEECc
Confidence 445555555544 344322 1345555555555553 222221 35555555555555 233322 1345666666
Q ss_pred CCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccccccccccCccceEeeecCccccCCc
Q 005619 270 NNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIP 349 (688)
Q Consensus 270 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 349 (688)
+|.+. .+|..+. .+|+.|++++|++. .+|..+. ++|+.|++++|+++..+... .++|+.|++++|.++ .+|
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~l--p~sL~~L~Ls~N~Lt-~LP 320 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHL--PSGITHLNVQSNSLT-ALP 320 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccCcccc--hhhHHHHHhcCCccc-cCC
Confidence 66655 3444433 35666666666665 2344332 35666666666666433221 235666677777666 344
Q ss_pred hhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccch
Q 005619 350 NTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPA 422 (688)
Q Consensus 350 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~ 422 (688)
..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++ .+|.
T Consensus 321 ~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~ 384 (754)
T PRK15370 321 ETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPE 384 (754)
T ss_pred cccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCH
Confidence 3332 467777777777654 444442 56777777777776 3554442 56777777777776 3444
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=4.7e-20 Score=189.11 Aligned_cols=280 Identities=23% Similarity=0.252 Sum_probs=141.4
Q ss_pred EEEcccCcCC-CcCcccccCCCCCCEEeccCCcCCCc----ccccccCCCCCCEEEccCCcCCC------CCchhhhCCc
Q 005619 217 WLQLSNNNFD-GQIFPNYVNLTRLLFLYLDNNHFSGK----IKDGLLRSSELMVLDISNNHLSG------HIPSWMGNFS 285 (688)
Q Consensus 217 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~Ls~n~l~~------~~~~~~~~l~ 285 (688)
.|+|..+.++ ......+..+++|+.|+++++.++.. ++..+...+++++++++++.+.+ ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3455555554 22233334455566666666665432 22233444555666665555441 1112233344
Q ss_pred CCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccccccccccCccceEeeecCcccc----CCchhccCC-CCccE
Q 005619 286 NLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGG----SIPNTIFRG-SALET 360 (688)
Q Consensus 286 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~----~~~~~~~~~-~~L~~ 360 (688)
+|+.|++++|.+.+..+..+..+.. . ++|++|++++|.+++ .+...+..+ ++|+.
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~-------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLR-------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEK 141 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhc-------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceE
Confidence 4444444444443322222222222 1 225555555555442 112233344 56666
Q ss_pred EeCcCCcCCCc----CchhhhcCCCccEEeccCCcCCCC----CchhhcCCCCCCEEEccCCcCccccchhhhhhhhccc
Q 005619 361 LDLRDNYFFGR----IPHQINEHSNLRALLLRGNYLQGP----IPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKV 432 (688)
Q Consensus 361 L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~ 432 (688)
|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++..+..+....
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~---- 217 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETL---- 217 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHh----
Confidence 66666666532 233445556677777777766632 223344456777777777766543322222110
Q ss_pred CCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCC
Q 005619 433 GSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIP 512 (688)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 512 (688)
..++.|+.|++++|.+++...
T Consensus 218 -----------------------------------------------------------~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 218 -----------------------------------------------------------ASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred -----------------------------------------------------------cccCCCCEEecCCCcCchHHH
Confidence 114566777777777665333
Q ss_pred hhhhc-----cCCCCeeeCCCCcCcc----CCCccccCCCCCCeEeCCCCccccc----CCcCCCCC-CCCCEEecCCCc
Q 005619 513 SEICD-----LQNIHGLNLSHNFLSG----SIPESFSNLKMIESLDLSHNKLNGQ----IPPQLTEL-HSLSKFDVSYND 578 (688)
Q Consensus 513 ~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~ls~N~ 578 (688)
..+.. .+.|+.|++++|.++. .++..+..+++|+.+|+++|.++.. ....+... +.|+++++.+|+
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 33322 2577777777777752 2334455567777777777777743 33334444 567777777765
Q ss_pred C
Q 005619 579 L 579 (688)
Q Consensus 579 l 579 (688)
+
T Consensus 319 ~ 319 (319)
T cd00116 319 F 319 (319)
T ss_pred C
Confidence 4
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=5.1e-19 Score=181.41 Aligned_cols=253 Identities=23% Similarity=0.273 Sum_probs=114.9
Q ss_pred cCCCCCEEEccCCCCCcc----cchhhhcCCCCCEEEccCCcCccccC------chhhcCCCCCCEEEcccCcCCCcCcc
Q 005619 162 VLPKLDCMNISKNSFEGN----IPSSIGKMQGLRLLDVSSNKFAGELS------QSPVTNCFSLEWLQLSNNNFDGQIFP 231 (688)
Q Consensus 162 ~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~------~~~~~~l~~L~~L~L~~n~i~~~~~~ 231 (688)
.++.|+.++++++.++.. ++..+...+.+++++++++.+.+ .+ ...+..+++|+.|++++|.+....+.
T Consensus 21 ~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 21 KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHHHHHHHHHhcCceeEEEccCCCCChhHHH
Confidence 344455555555544321 22333344445555555544431 01 01123344555555555554433333
Q ss_pred cccCCCC---CCEEeccCCcCCCc----ccccccCC-CCCCEEEccCCcCCCC----CchhhhCCcCCcEEEccccccCC
Q 005619 232 NYVNLTR---LLFLYLDNNHFSGK----IKDGLLRS-SELMVLDISNNHLSGH----IPSWMGNFSNLYILSMSKNLLEG 299 (688)
Q Consensus 232 ~~~~l~~---L~~L~L~~n~l~~~----~~~~~~~~-~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 299 (688)
.+..+.+ |++|++++|.+.+. +...+..+ ++|+.|++++|.+++. ++..+..+++|++|++++|.+.+
T Consensus 100 ~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 179 (319)
T cd00116 100 VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGD 179 (319)
T ss_pred HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCch
Confidence 3322222 55555555554421 11223333 5556666666555522 12233444556666666555543
Q ss_pred C----CcccccCCCCCcEEEccCCcCccccccc----c-ccCccceEeeecCccccCCchhcc-----CCCCccEEeCcC
Q 005619 300 N----IPVQFNNLAILQILDISENNLSGSMIST----L-NLSSVEHLYLQSNALGGSIPNTIF-----RGSALETLDLRD 365 (688)
Q Consensus 300 ~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~----~-~~~~L~~L~L~~n~l~~~~~~~~~-----~~~~L~~L~l~~ 365 (688)
. ++..+..+++|++|++++|.+.+..... + .+++|++|++++|.+++.....+. ..+.|+.|++++
T Consensus 180 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~ 259 (319)
T cd00116 180 AGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSC 259 (319)
T ss_pred HHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccC
Confidence 1 1222334445666666666554332211 1 345555555555555432221111 124566666666
Q ss_pred CcCCCc----CchhhhcCCCccEEeccCCcCCCC----CchhhcCC-CCCCEEEccCCc
Q 005619 366 NYFFGR----IPHQINEHSNLRALLLRGNYLQGP----IPHQLCQL-RKLSIMDLSHNR 415 (688)
Q Consensus 366 n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l-~~L~~L~ls~n~ 415 (688)
|.++.. +...+..+++|+.+++++|.++.. ....+... +.|+.+++.+|+
T Consensus 260 n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 260 NDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred CCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 665421 223344455666666666666533 22222233 466666666554
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1.3e-18 Score=147.51 Aligned_cols=186 Identities=27% Similarity=0.445 Sum_probs=148.2
Q ss_pred ccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCC
Q 005619 326 ISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRK 405 (688)
Q Consensus 326 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 405 (688)
+..++++.++.|.+++|+++ .+|+.+..+.+|+.|++++|++ ...|..++.+++|+.|+++-|++. ..|..|+.++.
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqi-e~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQI-EELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred ccccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchh-hhcChhhhhchhhhheecchhhhh-cCccccCCCch
Confidence 34457778889999999998 7888888999999999999999 567888999999999999999997 88999999999
Q ss_pred CCEEEccCCcCccc-cchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeecc
Q 005619 406 LSIMDLSHNRLNGS-IPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKN 484 (688)
Q Consensus 406 L~~L~ls~n~l~~~-~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 484 (688)
|+.||+.+|++... .|..+..
T Consensus 104 levldltynnl~e~~lpgnff~---------------------------------------------------------- 125 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFY---------------------------------------------------------- 125 (264)
T ss_pred hhhhhccccccccccCCcchhH----------------------------------------------------------
Confidence 99999999998742 2332211
Q ss_pred ccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCC
Q 005619 485 RYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLT 564 (688)
Q Consensus 485 ~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 564 (688)
+..|+.|.|+.|.+. .+|..++.+++|+.|.+..|.+- ..|..++.+++|+.|.+.+|+++ .+|++++
T Consensus 126 ---------m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 126 ---------MTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred ---------HHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 345666888888887 77888899999999999998887 68888899999999999999988 6666666
Q ss_pred CCCC---CCEEecCCCcCccCCC
Q 005619 565 ELHS---LSKFDVSYNDLSGPIP 584 (688)
Q Consensus 565 ~l~~---L~~L~ls~N~l~~~~p 584 (688)
++.- =+.+.+.+|++..+|.
T Consensus 194 ~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 194 NLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred hhhhhhhHHHHhhhhCCCCChHH
Confidence 6542 2345566677665543
No 22
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=2.1e-15 Score=165.68 Aligned_cols=118 Identities=36% Similarity=0.624 Sum_probs=106.4
Q ss_pred cccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecC
Q 005619 496 YMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVS 575 (688)
Q Consensus 496 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 575 (688)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|..+.++++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccCCCCCc--ccCCcCccccCCCCCCCCCCCCCCCC
Q 005619 576 YNDLSGPIPDKE--QFSTFDESSYRGNLHLCGPPINKSCT 613 (688)
Q Consensus 576 ~N~l~~~~p~~~--~~~~~~~~~~~~n~~l~~~p~~~~C~ 613 (688)
+|+++|.+|... .+.......+.+|+.+||.|....|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999999752 22233456788999999987666774
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.57 E-value=6.4e-17 Score=137.38 Aligned_cols=179 Identities=27% Similarity=0.485 Sum_probs=128.5
Q ss_pred ccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCc
Q 005619 233 YVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQ 312 (688)
Q Consensus 233 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 312 (688)
+..+.+++.|.+++|+++ .+|..++.+.+|+.|++++|+++ ..|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445667788888888888 56666788888888888888887 66777888888888888888877 6788888888888
Q ss_pred EEEccCCcCccc-cc-cccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCC
Q 005619 313 ILDISENNLSGS-MI-STLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGN 390 (688)
Q Consensus 313 ~L~Ls~n~l~~~-~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 390 (688)
.||+.+|++.+. .| .+|.+..|+.|++++|.+. .+|..++++++|+.|.+.+|.+ -..|..++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl-l~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL-LSLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch-hhCcHHHHHHHHHHHHhcccc
Confidence 888888887652 22 2336777777777777776 6777777777777777777766 345677777777777777777
Q ss_pred cCCCCCchhhcCC---CCCCEEEccCCcCc
Q 005619 391 YLQGPIPHQLCQL---RKLSIMDLSHNRLN 417 (688)
Q Consensus 391 ~l~~~~~~~~~~l---~~L~~L~ls~n~l~ 417 (688)
+++ .+|..++++ .+=+.+.+.+|+..
T Consensus 184 rl~-vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 184 RLT-VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred eee-ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 776 444444433 22234445555544
No 24
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=1.2e-14 Score=146.31 Aligned_cols=174 Identities=30% Similarity=0.471 Sum_probs=114.9
Q ss_pred CccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEc
Q 005619 332 SSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDL 411 (688)
Q Consensus 332 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 411 (688)
..-...+++.|++. ++|..++.+..|+.+.+..|.+ ..+|..+.++..|+.++|+.|+++ ..|..+|.|+ |+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~-r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCI-RTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccc-eecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33345566666666 6666666666666666666666 456666667777777777777776 5666666653 666777
Q ss_pred cCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccccc
Q 005619 412 SHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKG 491 (688)
Q Consensus 412 s~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (688)
++|+++ .+|+.++-
T Consensus 151 sNNkl~-~lp~~ig~----------------------------------------------------------------- 164 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGL----------------------------------------------------------------- 164 (722)
T ss_pred ecCccc-cCCccccc-----------------------------------------------------------------
Confidence 777765 44543321
Q ss_pred cccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCE
Q 005619 492 VILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSK 571 (688)
Q Consensus 492 ~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 571 (688)
...|..||.+.|++. .+|..++.+.+|+.|++..|++. ..|..+..|+ |..||+|+|+++ .||-.|.+|+.|++
T Consensus 165 --~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~ 238 (722)
T KOG0532|consen 165 --LPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQV 238 (722)
T ss_pred --chhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhhee
Confidence 345666777777776 55666777777777777777777 4555555554 677777777777 66777777777777
Q ss_pred EecCCCcCcc
Q 005619 572 FDVSYNDLSG 581 (688)
Q Consensus 572 L~ls~N~l~~ 581 (688)
|-|.+|+|..
T Consensus 239 l~LenNPLqS 248 (722)
T KOG0532|consen 239 LQLENNPLQS 248 (722)
T ss_pred eeeccCCCCC
Confidence 7777777764
No 25
>PLN03150 hypothetical protein; Provisional
Probab=99.36 E-value=2.4e-12 Score=141.74 Aligned_cols=92 Identities=32% Similarity=0.520 Sum_probs=84.9
Q ss_pred cccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCC-CCCCEE
Q 005619 494 LDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTEL-HSLSKF 572 (688)
Q Consensus 494 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L 572 (688)
+++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|+.++++++|+.|+|++|+++|.+|..+..+ .++..+
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceE
Confidence 5679999999999999999999999999999999999999999999999999999999999999999998764 467899
Q ss_pred ecCCCcCccCCCC
Q 005619 573 DVSYNDLSGPIPD 585 (688)
Q Consensus 573 ~ls~N~l~~~~p~ 585 (688)
++++|+..|.+|.
T Consensus 521 ~~~~N~~lc~~p~ 533 (623)
T PLN03150 521 NFTDNAGLCGIPG 533 (623)
T ss_pred EecCCccccCCCC
Confidence 9999998776653
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.27 E-value=7e-12 Score=132.24 Aligned_cols=180 Identities=36% Similarity=0.528 Sum_probs=98.4
Q ss_pred cCccceEeeecCccccCCchhccCCC-CccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEE
Q 005619 331 LSSVEHLYLQSNALGGSIPNTIFRGS-ALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIM 409 (688)
Q Consensus 331 ~~~L~~L~L~~n~l~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 409 (688)
.+.++.|++.+|.++ .++....... +|+.|++++|++. .+|..++.+++|+.|++++|++. .+|...+..+.|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344555555555554 3444444442 5666666666552 23344556666666666666665 344433355666666
Q ss_pred EccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccc
Q 005619 410 DLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESY 489 (688)
Q Consensus 410 ~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (688)
++++|+++ .+|.....
T Consensus 192 ~ls~N~i~-~l~~~~~~--------------------------------------------------------------- 207 (394)
T COG4886 192 DLSGNKIS-DLPPEIEL--------------------------------------------------------------- 207 (394)
T ss_pred eccCCccc-cCchhhhh---------------------------------------------------------------
Confidence 66666665 33332110
Q ss_pred cccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCC
Q 005619 490 KGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSL 569 (688)
Q Consensus 490 ~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 569 (688)
+..|++|++++|.+. ..+..+..+.++..|.+++|++. ..+..++.+++++.|++++|+++...+ +..+.++
T Consensus 208 ----~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l 279 (394)
T COG4886 208 ----LSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNL 279 (394)
T ss_pred ----hhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCcc
Confidence 223555666666433 34455666666666666666665 335556666666666666666663322 6666666
Q ss_pred CEEecCCCcCccCCCC
Q 005619 570 SKFDVSYNDLSGPIPD 585 (688)
Q Consensus 570 ~~L~ls~N~l~~~~p~ 585 (688)
+.|++++|.++...|.
T Consensus 280 ~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 280 RELDLSGNSLSNALPL 295 (394)
T ss_pred CEEeccCccccccchh
Confidence 6666666666655443
No 27
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.26 E-value=1.7e-13 Score=138.15 Aligned_cols=133 Identities=29% Similarity=0.428 Sum_probs=77.2
Q ss_pred CCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccccccccccCccceEeeecC
Q 005619 263 LMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSN 342 (688)
Q Consensus 263 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n 342 (688)
-...|++.|++. .+|..+..+..|+.+.+..|.+. .+|.+++++..|++++++.|+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-------------------- 134 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-------------------- 134 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh--------------------
Confidence 345566666665 55666666666666666666665 45555666655665665555554
Q ss_pred ccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccch
Q 005619 343 ALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPA 422 (688)
Q Consensus 343 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~ 422 (688)
..|..++.++ |+.|-+++|++ +.+|+.++....|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+
T Consensus 135 ----~lp~~lC~lp-Lkvli~sNNkl-~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 135 ----HLPDGLCDLP-LKVLIVSNNKL-TSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred ----cCChhhhcCc-ceeEEEecCcc-ccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 4444444444 55566666655 344555555566666666666665 45555666666666666666654 4444
Q ss_pred hhh
Q 005619 423 CIT 425 (688)
Q Consensus 423 ~l~ 425 (688)
.++
T Consensus 207 El~ 209 (722)
T KOG0532|consen 207 ELC 209 (722)
T ss_pred HHh
Confidence 443
No 28
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.20 E-value=5.6e-12 Score=120.23 Aligned_cols=114 Identities=22% Similarity=0.281 Sum_probs=67.1
Q ss_pred ccCCCCCcEEEccCCcCcccccccc-----ccCccceEeeecCccccCCch-------------hccCCCCccEEeCcCC
Q 005619 305 FNNLAILQILDISENNLSGSMISTL-----NLSSVEHLYLQSNALGGSIPN-------------TIFRGSALETLDLRDN 366 (688)
Q Consensus 305 l~~l~~L~~L~Ls~n~l~~~~~~~~-----~~~~L~~L~L~~n~l~~~~~~-------------~~~~~~~L~~L~l~~n 366 (688)
+..+++|+++|||+|-+....+..+ .+..|++|.|.+|.+....-. ....-+.|+++...+|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 3455566666666666654433322 466677777777665422111 1223366777777777
Q ss_pred cCCCc----CchhhhcCCCccEEeccCCcCCCC----CchhhcCCCCCCEEEccCCcCcc
Q 005619 367 YFFGR----IPHQINEHSNLRALLLRGNYLQGP----IPHQLCQLRKLSIMDLSHNRLNG 418 (688)
Q Consensus 367 ~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~ls~n~l~~ 418 (688)
++... +...|...+.|+.+.+..|.|... ....+..|++|+.|||.+|-++-
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~ 227 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL 227 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh
Confidence 77443 224455667777777777776422 23456677777777777777763
No 29
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.18 E-value=6.1e-12 Score=117.03 Aligned_cols=87 Identities=28% Similarity=0.333 Sum_probs=62.8
Q ss_pred cccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccC-CcCCCCCCCCCEE
Q 005619 494 LDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQI-PPQLTELHSLSKF 572 (688)
Q Consensus 494 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L 572 (688)
+++|+.||||+|.++ .+...=..+-+.+.|+|++|.+... ..++.+-+|..||++.|+|.... -..++++|.|+.+
T Consensus 328 L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l 404 (490)
T KOG1259|consen 328 LPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETL 404 (490)
T ss_pred cccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHH
Confidence 456777777777776 3334445567778888888888632 45677778888888888887432 2467888889999
Q ss_pred ecCCCcCccCC
Q 005619 573 DVSYNDLSGPI 583 (688)
Q Consensus 573 ~ls~N~l~~~~ 583 (688)
.|.+|++.+.+
T Consensus 405 ~L~~NPl~~~v 415 (490)
T KOG1259|consen 405 RLTGNPLAGSV 415 (490)
T ss_pred hhcCCCccccc
Confidence 99999988754
No 30
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=3.6e-11 Score=126.88 Aligned_cols=182 Identities=33% Similarity=0.483 Sum_probs=116.2
Q ss_pred CCCCcEEEccCCcCccccccccccC-ccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEe
Q 005619 308 LAILQILDISENNLSGSMISTLNLS-SVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALL 386 (688)
Q Consensus 308 l~~L~~L~Ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 386 (688)
++.++.|++.+|.++...+...... +|+.|++++|.+. .+|..+..+++|+.|++++|++.. +|......++|+.|+
T Consensus 115 ~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~-l~~~~~~~~~L~~L~ 192 (394)
T COG4886 115 LTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLD 192 (394)
T ss_pred ccceeEEecCCcccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhh-hhhhhhhhhhhhhee
Confidence 3455666666666655544443442 6666666666666 455556677777777777777743 344444667777777
Q ss_pred ccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcccCCcccccceeEEecccccccccccccceecccCC
Q 005619 387 LRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWKVGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDG 466 (688)
Q Consensus 387 L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 466 (688)
+++|++. .+|........|+++.+++|++. ..+..+.+
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~---------------------------------------- 230 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSN---------------------------------------- 230 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhh----------------------------------------
Confidence 7777777 45554455566777888777532 22222221
Q ss_pred CCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCC
Q 005619 467 IDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIE 546 (688)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 546 (688)
+..+..+.+++|++. ..+..++.+++++.|++++|+++. ++. ++.+.+++
T Consensus 231 ---------------------------~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~ 280 (394)
T COG4886 231 ---------------------------LKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLR 280 (394)
T ss_pred ---------------------------cccccccccCCceee-eccchhccccccceeccccccccc-ccc-ccccCccC
Confidence 334555667777765 336667778888888888888884 333 78888888
Q ss_pred eEeCCCCcccccCCcCC
Q 005619 547 SLDLSHNKLNGQIPPQL 563 (688)
Q Consensus 547 ~L~Ls~N~l~~~~p~~l 563 (688)
.||+++|.++...|...
T Consensus 281 ~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 281 ELDLSGNSLSNALPLIA 297 (394)
T ss_pred EEeccCccccccchhhh
Confidence 88888888886655543
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=8.4e-12 Score=122.29 Aligned_cols=207 Identities=25% Similarity=0.219 Sum_probs=96.7
Q ss_pred CcceeEEECCCCCCCCcc--hhhhCCCCCCEEECCCCcCCCCCc-hHHhhCCCCCcEEEccCCCCCCCCC---CCCCCCc
Q 005619 68 TFQLKVLSLPNCNLGVIP--NFLLHQFNLKYLDLSHNKLAGNFP-TWLLENNTKLEVLYLTNNSFSGFQL---TSAQHGL 141 (688)
Q Consensus 68 l~~L~~L~l~~n~l~~lp--~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~~L 141 (688)
+.+|+.+.|.++.+...+ .....|++++.||||.|-+..-.+ ..+.+.+++|+.|+++.|.+..... ...+++|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 456666666666665544 255666677777777765542111 1234566666666666666553211 1134445
Q ss_pred CEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcc
Q 005619 142 ISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLS 221 (688)
Q Consensus 142 ~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 221 (688)
+.|.++.|.++-.--..+...+|+|+.|++.+|...........-+..|+.|||++|.+.. .+
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~---------------- 262 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FD---------------- 262 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cc----------------
Confidence 5555555544421112222234555555555443211222222233344444554444431 11
Q ss_pred cCcCCCcCcccccCCCCCCEEeccCCcCCCc-cccc-----ccCCCCCCEEEccCCcCCCC-CchhhhCCcCCcEEEccc
Q 005619 222 NNNFDGQIFPNYVNLTRLLFLYLDNNHFSGK-IKDG-----LLRSSELMVLDISNNHLSGH-IPSWMGNFSNLYILSMSK 294 (688)
Q Consensus 222 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~-----~~~~~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~l~~ 294 (688)
.....+.++.|+.|+++.+.+... .|+. ....++|++|++..|++... ....+..+++|+.|.+..
T Consensus 263 -------~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 263 -------QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred -------cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 112233344444444444444321 1111 23345666666666666411 112234455666666666
Q ss_pred cccC
Q 005619 295 NLLE 298 (688)
Q Consensus 295 n~l~ 298 (688)
|.+.
T Consensus 336 n~ln 339 (505)
T KOG3207|consen 336 NYLN 339 (505)
T ss_pred cccc
Confidence 6654
No 32
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=5.2e-11 Score=106.92 Aligned_cols=109 Identities=25% Similarity=0.373 Sum_probs=31.6
Q ss_pred CCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEE
Q 005619 90 HQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCM 169 (688)
Q Consensus 90 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L 169 (688)
+..++++|+|++|.|+ .+.. +...+.+|+.|++++|.++.+.....++.|++|++++|.++ .+...+...+|+|++|
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie~-L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIEN-LGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S---TT-TT--EEE-TTS--S--TT----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccccc-cccc-hhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 3445666666666665 3322 21245566666666666666555555666666666666666 4544443346677777
Q ss_pred EccCCCCCcc-cchhhhcCCCCCEEEccCCcCc
Q 005619 170 NISKNSFEGN-IPSSIGKMQGLRLLDVSSNKFA 201 (688)
Q Consensus 170 ~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~ 201 (688)
++++|++... .-..++.+++|++|++.+|.+.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 7777766532 1234556666666666666655
No 33
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=2.1e-11 Score=116.40 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=58.4
Q ss_pred cCCCCCCEEEcccCcCCC----cCcccccCCCCCCEEeccCCcCCCc----ccccccCCCCCCEEEccCCcCCCCCchhh
Q 005619 210 TNCFSLEWLQLSNNNFDG----QIFPNYVNLTRLLFLYLDNNHFSGK----IKDGLLRSSELMVLDISNNHLSGHIPSWM 281 (688)
Q Consensus 210 ~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 281 (688)
...+.|+.+.+..|.|.. .....+..+++|+.|||.+|-++.. +...+..+++|+.|++++|.+.......+
T Consensus 182 ~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~ 261 (382)
T KOG1909|consen 182 QSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAF 261 (382)
T ss_pred HhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHH
Confidence 334455555555554431 1123344555666666665555432 22234445566666666666654443333
Q ss_pred h-----CCcCCcEEEccccccCCC----CcccccCCCCCcEEEccCCcCc
Q 005619 282 G-----NFSNLYILSMSKNLLEGN----IPVQFNNLAILQILDISENNLS 322 (688)
Q Consensus 282 ~-----~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~ 322 (688)
. ..++|+.|.+.+|.++.. +..+....+.|..|+|++|++.
T Consensus 262 ~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 262 VDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 1 256666666666666531 1223344566777777777763
No 34
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.4e-11 Score=120.73 Aligned_cols=185 Identities=21% Similarity=0.246 Sum_probs=92.5
Q ss_pred CCCCcCEEEccCCCCCCCCC-hhhhhcCCCCCEEEccCCCCCcc--cchhhhcCCCCCEEEccCCcCccccCchhhcCCC
Q 005619 137 AQHGLISLDISSNNFTGKLP-QNMGIVLPKLDCMNISKNSFEGN--IPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCF 213 (688)
Q Consensus 137 ~~~~L~~L~ls~n~~~~~~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 213 (688)
...+|+++.|.++.+. ..+ +.....+++++.|||++|-+... +......+++|+.|+++.|++........-..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 3445555555555543 222 12334566777777776655422 2233446677777777777665333332223455
Q ss_pred CCCEEEcccCcCCCc-CcccccCCCCCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCC-chhhhCCcCCcEEE
Q 005619 214 SLEWLQLSNNNFDGQ-IFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHI-PSWMGNFSNLYILS 291 (688)
Q Consensus 214 ~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~ 291 (688)
.|+.|.++.|.++.. +......+|+|+.|++..|...........-+..|+.|||++|.+.... -...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 666666666666521 1122345566666666666422222222333455666666666654221 12344556666666
Q ss_pred ccccccCCCC-ccc-----ccCCCCCcEEEccCCcCc
Q 005619 292 MSKNLLEGNI-PVQ-----FNNLAILQILDISENNLS 322 (688)
Q Consensus 292 l~~n~l~~~~-~~~-----l~~l~~L~~L~Ls~n~l~ 322 (688)
++.+.+.... |++ ...+++|++|++..|++.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 6666554321 111 223445555555555543
No 35
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.10 E-value=3.7e-11 Score=111.88 Aligned_cols=134 Identities=28% Similarity=0.355 Sum_probs=104.6
Q ss_pred ccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEccCCcCccccchhhhhhhhcc
Q 005619 352 IFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDLSHNRLNGSIPACITNLLFWK 431 (688)
Q Consensus 352 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~ 431 (688)
+..+..|+++|+++|.| ..+.++..-.|.++.|++++|.+... +.+..+++|+.||+|+|.++. +-.+-
T Consensus 280 ~dTWq~LtelDLS~N~I-~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh------- 348 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLI-TQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWH------- 348 (490)
T ss_pred cchHhhhhhccccccch-hhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhH-------
Confidence 33456799999999988 45667788889999999999999733 347889999999999998862 11111
Q ss_pred cCCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccC
Q 005619 432 VGSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDI 511 (688)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 511 (688)
..+-+.++|.|+.|.+. .
T Consensus 349 ------------------------------------------------------------~KLGNIKtL~La~N~iE--~ 366 (490)
T KOG1259|consen 349 ------------------------------------------------------------LKLGNIKTLKLAQNKIE--T 366 (490)
T ss_pred ------------------------------------------------------------hhhcCEeeeehhhhhHh--h
Confidence 11456788999999885 2
Q ss_pred ChhhhccCCCCeeeCCCCcCccCC-CccccCCCCCCeEeCCCCccccc
Q 005619 512 PSEICDLQNIHGLNLSHNFLSGSI-PESFSNLKMIESLDLSHNKLNGQ 558 (688)
Q Consensus 512 p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 558 (688)
-..++.+-+|..||+++|+|.... -..+|+++.|+.+.|.+|.+.+.
T Consensus 367 LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 367 LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 345788899999999999998542 35799999999999999999954
No 36
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=1.5e-10 Score=104.07 Aligned_cols=108 Identities=28% Similarity=0.344 Sum_probs=32.9
Q ss_pred CCCCCcEEEccCCCCCCCCCCC-CCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhh-hcCCCCCE
Q 005619 115 NNTKLEVLYLTNNSFSGFQLTS-AQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSI-GKMQGLRL 192 (688)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~~~-~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~ 192 (688)
+..++++|+|++|.++.+.... .+.+|+.|++++|.++ .++. +. .+++|++|++++|.++.. .+.+ ..+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~-~l~~-l~-~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQIT-KLEG-LP-GLPRLKTLDLSNNRISSI-SEGLDKNLPNLQE 92 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred cccccccccccccccccccchhhhhcCCCEEECCCCCCc-cccC-cc-ChhhhhhcccCCCCCCcc-ccchHHhCCcCCE
Confidence 5567788888888877665444 4667777777777776 4442 22 467777777777777743 3333 35677777
Q ss_pred EEccCCcCccccCchhhcCCCCCCEEEcccCcCC
Q 005619 193 LDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFD 226 (688)
Q Consensus 193 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~ 226 (688)
|++++|++...-....+..+++|+.|++.+|.++
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 7777777663333334455666666666666655
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.99 E-value=2.8e-10 Score=83.88 Aligned_cols=60 Identities=43% Similarity=0.630 Sum_probs=36.8
Q ss_pred CCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEecCCCcC
Q 005619 520 NIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDVSYNDL 579 (688)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l 579 (688)
+|+.|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666655555666666666666666666655556666666666666666653
No 38
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=5.2e-10 Score=82.45 Aligned_cols=61 Identities=44% Similarity=0.612 Sum_probs=57.5
Q ss_pred ccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcc
Q 005619 495 DYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKL 555 (688)
Q Consensus 495 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 555 (688)
++|++|++++|+++...+..|..+++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688999999999988889999999999999999999988889999999999999999986
No 39
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.87 E-value=2.6e-09 Score=120.27 Aligned_cols=249 Identities=22% Similarity=0.208 Sum_probs=105.9
Q ss_pred CCCCCEEEccCCCC-cccccccCCCCCcceeEEECCCCCC-CCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCc
Q 005619 43 LSKLEVFQLSMEAD-LLQVKIENCLPTFQLKVLSLPNCNL-GVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLE 120 (688)
Q Consensus 43 l~~L~~L~Ls~~~~-~~~~~~~~~~~l~~L~~L~l~~n~l-~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 120 (688)
++.|+.|-+..|.. ...++...|..++.|++||+++|.- +++|..++.+-+||+|++++..++ .+|..+ +++..|.
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l-~~Lk~L~ 621 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGL-GNLKKLI 621 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHH-HHHHhhh
Confidence 33455555544431 2223333344555555555554432 555555555555555555555555 555544 3555555
Q ss_pred EEEccCCCCCCCC--CCCCCCCcCEEEccCCCC--CCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCC----E
Q 005619 121 VLYLTNNSFSGFQ--LTSAQHGLISLDISSNNF--TGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLR----L 192 (688)
Q Consensus 121 ~L~L~~n~l~~~~--~~~~~~~L~~L~ls~n~~--~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----~ 192 (688)
+|++..+.-.... +...+.+|++|.+..-.. +...-..+ ..+.+|+.+....... .+-..+..++.|. .
T Consensus 622 ~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el-~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~ 698 (889)
T KOG4658|consen 622 YLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKEL-ENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQS 698 (889)
T ss_pred eeccccccccccccchhhhcccccEEEeeccccccchhhHHhh-hcccchhhheeecchh--HhHhhhhhhHHHHHHhHh
Confidence 5555544322111 111355555555543321 11111111 2344444444432221 0111122222222 2
Q ss_pred EEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccC------CCCCCEEeccCCcCCCcccccccCCCCCCEE
Q 005619 193 LDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVN------LTRLLFLYLDNNHFSGKIKDGLLRSSELMVL 266 (688)
Q Consensus 193 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~------l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 266 (688)
+.+.++... .. ......+.+|+.|.+.++.+.......... ++++..+...++... ..+.+....++|+.|
T Consensus 699 l~~~~~~~~-~~-~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l 775 (889)
T KOG4658|consen 699 LSIEGCSKR-TL-ISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSL 775 (889)
T ss_pred hhhcccccc-ee-ecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEE
Confidence 222222211 11 112345667777777777665322211111 222333333333221 122222345677777
Q ss_pred EccCCcCCCCCchhhhCCcCCcEEEccccccCC
Q 005619 267 DISNNHLSGHIPSWMGNFSNLYILSMSKNLLEG 299 (688)
Q Consensus 267 ~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 299 (688)
.+..+.....+......+..+..+.+..+.+.+
T Consensus 776 ~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 776 SLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred EEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 777666554444444445555554454444443
No 40
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.86 E-value=3.7e-09 Score=119.06 Aligned_cols=274 Identities=21% Similarity=0.201 Sum_probs=164.1
Q ss_pred CCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCC--CCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCE
Q 005619 115 NNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNN--FTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRL 192 (688)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~--~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 192 (688)
.....+...+-+|.+........++.|++|-+..|. +. .++..++..+|.|+.||+++|.--+.+|+.++.+-+|++
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred chhheeEEEEeccchhhccCCCCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 345677777777777766666677788888888886 44 777777778888888888887766678888888888888
Q ss_pred EEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCC--CcccccccCCCCCCEEEccC
Q 005619 193 LDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFS--GKIKDGLLRSSELMVLDISN 270 (688)
Q Consensus 193 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~~~~L~~L~Ls~ 270 (688)
|++++..+. .+|..+ .++..|.+|++..+......+.....+++|++|.+...... ...-..+..+.+|+.+....
T Consensus 600 L~L~~t~I~-~LP~~l-~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~ 677 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGL-GNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITI 677 (889)
T ss_pred ccccCCCcc-ccchHH-HHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeec
Confidence 888888887 777764 67888888888887655555566666888888887665422 11122234444555554433
Q ss_pred CcCCCCCchhhhCCcCCc----EEEccccccCCCCcccccCCCCCcEEEccCCcCcccccccc------c-cCccceEee
Q 005619 271 NHLSGHIPSWMGNFSNLY----ILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGSMISTL------N-LSSVEHLYL 339 (688)
Q Consensus 271 n~l~~~~~~~~~~l~~L~----~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~------~-~~~L~~L~L 339 (688)
... .+-..+..++.|. .+.+..+... ..+..+..+.+|+.|.+.++.+........ . ++++..+..
T Consensus 678 ~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~ 754 (889)
T KOG4658|consen 678 SSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSI 754 (889)
T ss_pred chh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHh
Confidence 222 0111122223322 2222222222 334456667778888887777654322211 1 223333333
Q ss_pred ecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCC
Q 005619 340 QSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGP 395 (688)
Q Consensus 340 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 395 (688)
.++... ..+......++|+.|.+..+.....+......+..+..+.+..+.+.+.
T Consensus 755 ~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 755 LNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred hccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 333322 1222223346777777777766555555555555566555555555543
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.81 E-value=6.3e-10 Score=117.45 Aligned_cols=224 Identities=26% Similarity=0.263 Sum_probs=99.6
Q ss_pred CCCCcceeEEECCCCCCCCcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCCCCCCcCEE
Q 005619 65 CLPTFQLKVLSLPNCNLGVIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTSAQHGLISL 144 (688)
Q Consensus 65 ~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L 144 (688)
+..+.+|+.|++.+|++..+...+..+++|++|++++|.|+. +.. +..++.|+.|++++|.++.+.....+..|+.+
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~-i~~--l~~l~~L~~L~l~~N~i~~~~~~~~l~~L~~l 167 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITK-LEG--LSTLTLLKELNLSGNLISDISGLESLKSLKLL 167 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheecccccccc-ccc--hhhccchhhheeccCcchhccCCccchhhhcc
Confidence 344455555555555554444334445555555555555542 221 12344455555555555544433344445555
Q ss_pred EccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCc
Q 005619 145 DISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNN 224 (688)
Q Consensus 145 ~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 224 (688)
++++|.+. .+... . ...+.+++.+.+.+|.+. .+.. +..+..+..+++..|.
T Consensus 168 ~l~~n~i~-~ie~~-----------------------~-~~~~~~l~~l~l~~n~i~-~i~~--~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 168 DLSYNRIV-DIEND-----------------------E-LSELISLEELDLGGNSIR-EIEG--LDLLKKLVLLSLLDNK 219 (414)
T ss_pred cCCcchhh-hhhhh-----------------------h-hhhccchHHHhccCCchh-cccc--hHHHHHHHHhhccccc
Confidence 55555444 22221 1 234444445555554443 1111 1122223333444444
Q ss_pred CCCcCcccccCCC--CCCEEeccCCcCCCcccccccCCCCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCC--
Q 005619 225 FDGQIFPNYVNLT--RLLFLYLDNNHFSGKIKDGLLRSSELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGN-- 300 (688)
Q Consensus 225 i~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 300 (688)
++...+ +.... .|+.+++++|.+.. .+..+..+..+..|++..|++.... .+...+.+..+....+.+...
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhcchhh
Confidence 432111 11111 25555555555542 2233444556666666666554221 123334444555555544311
Q ss_pred -Ccc-cccCCCCCcEEEccCCcCccc
Q 005619 301 -IPV-QFNNLAILQILDISENNLSGS 324 (688)
Q Consensus 301 -~~~-~l~~l~~L~~L~Ls~n~l~~~ 324 (688)
... .....+.++...+..|.+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred hhccccccccccccccccccCccccc
Confidence 111 134455666677776666543
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.75 E-value=9e-10 Score=116.25 Aligned_cols=245 Identities=28% Similarity=0.292 Sum_probs=165.6
Q ss_pred hCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCC-CCCCCCcCEEEccCCCCCCCCChhhhhcCCCCC
Q 005619 89 LHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQL-TSAQHGLISLDISSNNFTGKLPQNMGIVLPKLD 167 (688)
Q Consensus 89 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~ 167 (688)
..+..++.+++..|.+.. +-.. ...+++|+.|++.+|++..+.. ...+++|++|++++|.|+ .+...- .++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~-l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~-~i~~l~--~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNH-LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKIT-KLEGLS--TLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcc-cccccceeeeeccccchhhcccchhhhhcchheeccccccc-cccchh--hccchh
Confidence 345556666677766652 1111 2356777777777777777655 566777778888887776 333222 366688
Q ss_pred EEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCc-hhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccC
Q 005619 168 CMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQ-SPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDN 246 (688)
Q Consensus 168 ~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 246 (688)
.|++++|.++.. ..+..++.|+.+++++|.+. .+.. . ...+.+++.+++.+|.+.. ...+..+..+..+++..
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~-~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~ 217 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIV-DIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLD 217 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhh-hhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccc
Confidence 888888888743 34556889999999999987 4444 2 3678899999999998874 33344555666668888
Q ss_pred CcCCCcccccccCCCC--CCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCCcEEEccCCcCccc
Q 005619 247 NHFSGKIKDGLLRSSE--LMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAILQILDISENNLSGS 324 (688)
Q Consensus 247 n~l~~~~~~~~~~~~~--L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 324 (688)
|.++...+ +..... |+.+++++|.+.. .+..+..+..+..+++.+|++... ..+...+.+..+....+.+...
T Consensus 218 n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 292 (414)
T KOG0531|consen 218 NKISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALS 292 (414)
T ss_pred ccceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcch
Confidence 88874322 222333 8999999999883 335567788999999999988643 2344556677777777776632
Q ss_pred cc---c--ccccCccceEeeecCccccCCc
Q 005619 325 MI---S--TLNLSSVEHLYLQSNALGGSIP 349 (688)
Q Consensus 325 ~~---~--~~~~~~L~~L~L~~n~l~~~~~ 349 (688)
.. . ....+.++.+.+..+.+....+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 293 EAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhhhccccccccccccccccccCccccccc
Confidence 11 1 2256778888888887764443
No 43
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=3.5e-10 Score=105.49 Aligned_cols=64 Identities=30% Similarity=0.253 Sum_probs=26.3
Q ss_pred CCCcceeEEECCCCCC-CCcchhhhCCCCCCEEECCCCc-CCCCCchHHhhCCCCCcEEEccCCCC
Q 005619 66 LPTFQLKVLSLPNCNL-GVIPNFLLHQFNLKYLDLSHNK-LAGNFPTWLLENNTKLEVLYLTNNSF 129 (688)
Q Consensus 66 ~~l~~L~~L~l~~n~l-~~lp~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~L~~n~l 129 (688)
.+|.+|+.|.+.++++ ..+...+++..+|+.|+++.+. ++..-...+++.|+.|..|++++|.+
T Consensus 207 s~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l 272 (419)
T KOG2120|consen 207 SQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFL 272 (419)
T ss_pred HHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhc
Confidence 3344444444444444 3333344444444444444432 22111222334444444444444433
No 44
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=1.1e-09 Score=113.88 Aligned_cols=85 Identities=33% Similarity=0.341 Sum_probs=54.8
Q ss_pred cccccEEEccCCcccccCCh-hhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCC-cCCCCCCCCCE
Q 005619 494 LDYMAGLDLSSNKLTGDIPS-EICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIP-PQLTELHSLSK 571 (688)
Q Consensus 494 l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~ 571 (688)
++.|+.|||+.|.+. .+|. .-.++. |+.|+|++|.++.. ..+.+|++|+.||+|+|-|.+.-. ..+..|.+|..
T Consensus 208 l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~ 283 (1096)
T KOG1859|consen 208 LPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIV 283 (1096)
T ss_pred cccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHH
Confidence 566777888888776 3332 222333 77788888877733 346677778888888887765321 12345566777
Q ss_pred EecCCCcCccC
Q 005619 572 FDVSYNDLSGP 582 (688)
Q Consensus 572 L~ls~N~l~~~ 582 (688)
|.|.+|++.|-
T Consensus 284 L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 284 LWLEGNPLCCA 294 (1096)
T ss_pred HhhcCCccccC
Confidence 78888887763
No 45
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.54 E-value=1.7e-09 Score=112.70 Aligned_cols=128 Identities=27% Similarity=0.254 Sum_probs=99.5
Q ss_pred CCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEcc
Q 005619 93 NLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNIS 172 (688)
Q Consensus 93 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~ 172 (688)
.|.+.+.++|.+. .+... ++-++.|+.|+|++|+++.......+++|++|||++|.+. .+|..-...+ +|+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~S-Lqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDES-LQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHH-HHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhc-cccccchhhh-hheeeeec
Confidence 4677777888776 33333 3567889999999999998877778999999999999988 6665444344 49999999
Q ss_pred CCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCC
Q 005619 173 KNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFD 226 (688)
Q Consensus 173 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~ 226 (688)
+|.++.. ..+.++.+|+.||+++|-+.+.-.-.++..+..|+.|+|.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9988743 457788999999999998886555555667778899999998875
No 46
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.52 E-value=6.5e-09 Score=97.20 Aligned_cols=158 Identities=21% Similarity=0.174 Sum_probs=90.3
Q ss_pred CCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCc-CccccCchhhcCCCCCCE
Q 005619 139 HGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNK-FAGELSQSPVTNCFSLEW 217 (688)
Q Consensus 139 ~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~ 217 (688)
+.|+++|||...++..--..+...+.+|+.|.+.++.+.+.+...+++-.+|+.|+++.+. ++...-.-.+.+|+.|.+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 4588888888877755555555678888888888888887777778888888888887764 322222334567777777
Q ss_pred EEcccCcCCCcCcccc-c-CCCCCCEEeccCCcCC---CcccccccCCCCCCEEEccCCcC-CCCCchhhhCCcCCcEEE
Q 005619 218 LQLSNNNFDGQIFPNY-V-NLTRLLFLYLDNNHFS---GKIKDGLLRSSELMVLDISNNHL-SGHIPSWMGNFSNLYILS 291 (688)
Q Consensus 218 L~L~~n~i~~~~~~~~-~-~l~~L~~L~L~~n~l~---~~~~~~~~~~~~L~~L~Ls~n~l-~~~~~~~~~~l~~L~~L~ 291 (688)
|+++.|.+........ . --++|+.|+++++.-. ..+..-..++++|..|||++|.. +......|.+++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 7777776553221111 1 1245566666555311 01111123455555555555432 222222334455555555
Q ss_pred ccccc
Q 005619 292 MSKNL 296 (688)
Q Consensus 292 l~~n~ 296 (688)
++.|.
T Consensus 345 lsRCY 349 (419)
T KOG2120|consen 345 LSRCY 349 (419)
T ss_pred hhhhc
Confidence 55553
No 47
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.51 E-value=7.4e-09 Score=85.49 Aligned_cols=89 Identities=22% Similarity=0.325 Sum_probs=50.3
Q ss_pred ccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEec
Q 005619 495 DYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFDV 574 (688)
Q Consensus 495 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 574 (688)
+.++.|+|++|+++ .+|.++..++.|+.|+++.|.+. ..|..+..|.+|-.||..+|.+- .+|..+-.-+.....++
T Consensus 77 ~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~l 153 (177)
T KOG4579|consen 77 PTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKL 153 (177)
T ss_pred chhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHh
Confidence 34555666666666 55666666666666666666666 45555555666666666666655 33333222222333344
Q ss_pred CCCcCccCCCCC
Q 005619 575 SYNDLSGPIPDK 586 (688)
Q Consensus 575 s~N~l~~~~p~~ 586 (688)
.++++.+.+|..
T Consensus 154 gnepl~~~~~~k 165 (177)
T KOG4579|consen 154 GNEPLGDETKKK 165 (177)
T ss_pred cCCcccccCccc
Confidence 556666655543
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=1.4e-07 Score=88.53 Aligned_cols=215 Identities=17% Similarity=0.144 Sum_probs=117.9
Q ss_pred chhhcCCCCCCEEeCCCCcCcccccCHHhhc-cCCCCCEEEccCCCCccccccc-CCCCCcceeEEECCCCCCCC-cchh
Q 005619 11 PSVIANLTSLEYLALYDNKFKGRLFSFCSLA-NLSKLEVFQLSMEADLLQVKIE-NCLPTFQLKVLSLPNCNLGV-IPNF 87 (688)
Q Consensus 11 ~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~-~l~~L~~L~Ls~~~~~~~~~~~-~~~~l~~L~~L~l~~n~l~~-lp~~ 87 (688)
+-.+.....++.|-+-++.|.. .-.+..|+ .++.++.+||.+|.+....... .+.++++|++|+++.|.+.. |-..
T Consensus 38 ~~~v~s~ra~ellvln~~~id~-~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~l 116 (418)
T KOG2982|consen 38 YLGVSSLRALELLVLNGSIIDN-EGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSL 116 (418)
T ss_pred eeeeccccchhhheecCCCCCc-chhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccC
Confidence 3334444556667777776654 22233343 4788888999888776443333 24578899999999998832 2111
Q ss_pred hhCCCCCCEEECCCCcCCCCCchHHhhCCCCCcEEEccCCCCCCCCCCC-----CCCCcCEEEccCCCCCCCC-Chhhhh
Q 005619 88 LLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLEVLYLTNNSFSGFQLTS-----AQHGLISLDISSNNFTGKL-PQNMGI 161 (688)
Q Consensus 88 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-----~~~~L~~L~ls~n~~~~~~-~~~~~~ 161 (688)
-....+|++|-|.+..+.-.-...+...+|.++.|.++.|++..+.... .-+.+++|.+-.|...... -..+..
T Consensus 117 p~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r 196 (418)
T KOG2982|consen 117 PLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR 196 (418)
T ss_pred cccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh
Confidence 1456688999988887765555566678888889988888655443222 1223444444333221000 000112
Q ss_pred cCCCCCEEEccCCCCCcc-cchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCC
Q 005619 162 VLPKLDCMNISKNSFEGN-IPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFD 226 (688)
Q Consensus 162 ~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~ 226 (688)
.+|++..+.+..|.+... ....+..++.+.-|+|+.+++..-.....+.++++|..|.++++.+.
T Consensus 197 ~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 197 IFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 345555555555544322 11223344555555666555543333333445555555555555443
No 49
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.28 E-value=4.6e-08 Score=96.03 Aligned_cols=135 Identities=19% Similarity=0.143 Sum_probs=68.9
Q ss_pred cCCCCCEEEccCCcCccccC-chhhcCCCCCCEEEcccCc-CCCcCcccc-cCCCCCCEEeccCCcCCC--cccccccCC
Q 005619 186 KMQGLRLLDVSSNKFAGELS-QSPVTNCFSLEWLQLSNNN-FDGQIFPNY-VNLTRLLFLYLDNNHFSG--KIKDGLLRS 260 (688)
Q Consensus 186 ~l~~L~~L~L~~n~l~~~~~-~~~~~~l~~L~~L~L~~n~-i~~~~~~~~-~~l~~L~~L~L~~n~l~~--~~~~~~~~~ 260 (688)
.+..|++|+.+++...+..+ .....++.+|+.+.++.+. ++..-...+ .+++.|+.+++..+.... .+...-.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 34556666666553222211 1222445666666666654 222222222 245666666666654321 122222456
Q ss_pred CCCCEEEccCCcCCCCC-----chhhhCCcCCcEEEccccccC-CCCcccccCCCCCcEEEccCCc
Q 005619 261 SELMVLDISNNHLSGHI-----PSWMGNFSNLYILSMSKNLLE-GNIPVQFNNLAILQILDISENN 320 (688)
Q Consensus 261 ~~L~~L~Ls~n~l~~~~-----~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~Ls~n~ 320 (688)
+.|+++.+++|...... ...-..+..|+.+.++++... ...-+.+..+++|+.+++-+++
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 67777777766533111 111233566777777777543 2233455667788887777664
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.25 E-value=1.8e-07 Score=86.60 Aligned_cols=111 Identities=19% Similarity=0.106 Sum_probs=50.9
Q ss_pred CCCCCEEEccCCcCccccCchh----hcCCCCCCEEEcccCcCCCcC-----cccccCCCCCCEEeccCCcCCCcc----
Q 005619 187 MQGLRLLDVSSNKFAGELSQSP----VTNCFSLEWLQLSNNNFDGQI-----FPNYVNLTRLLFLYLDNNHFSGKI---- 253 (688)
Q Consensus 187 l~~L~~L~L~~n~l~~~~~~~~----~~~l~~L~~L~L~~n~i~~~~-----~~~~~~l~~L~~L~L~~n~l~~~~---- 253 (688)
-|.|++.....|++. ..+... +..-..|+.+.+..|.|.... ...+..+.+|+.||+..|.++...
T Consensus 156 kp~Le~vicgrNRle-ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 156 KPKLEVVICGRNRLE-NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred CCCceEEEeccchhc-cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 355666666666654 222211 111235556666655554211 112234455666666666554321
Q ss_pred cccccCCCCCCEEEccCCcCCCCCchhhh------CCcCCcEEEccccccC
Q 005619 254 KDGLLRSSELMVLDISNNHLSGHIPSWMG------NFSNLYILSMSKNLLE 298 (688)
Q Consensus 254 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~------~l~~L~~L~l~~n~l~ 298 (688)
..++...+.|+.|.+..|-++......+- ..++|..|...+|.+.
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 22233444556666666655543332221 1344555555555443
No 51
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.25 E-value=2.4e-07 Score=86.92 Aligned_cols=105 Identities=22% Similarity=0.138 Sum_probs=67.7
Q ss_pred CCCEEEccCCCCcccccccCCC-CCcceeEEECCCCCCC---CcchhhhCCCCCCEEECCCCcCCCCCchHHhhCCCCCc
Q 005619 45 KLEVFQLSMEADLLQVKIENCL-PTFQLKVLSLPNCNLG---VIPNFLLHQFNLKYLDLSHNKLAGNFPTWLLENNTKLE 120 (688)
Q Consensus 45 ~L~~L~Ls~~~~~~~~~~~~~~-~l~~L~~L~l~~n~l~---~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 120 (688)
.++.+-+.++.+-..-....|+ .+.+++.+||.+|.|+ ++...+.++|.|++|+++.|.+...|...- ....+|+
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp-~p~~nl~ 124 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP-LPLKNLR 124 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc-ccccceE
Confidence 3444455444443222222233 3678999999999995 455567899999999999999974443321 2567899
Q ss_pred EEEccCCCCCCCCC---CCCCCCcCEEEccCCC
Q 005619 121 VLYLTNNSFSGFQL---TSAQHGLISLDISSNN 150 (688)
Q Consensus 121 ~L~L~~n~l~~~~~---~~~~~~L~~L~ls~n~ 150 (688)
+|.|.+..+.-... ...++.+++|.+|.|.
T Consensus 125 ~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 125 VLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNS 157 (418)
T ss_pred EEEEcCCCCChhhhhhhhhcchhhhhhhhccch
Confidence 99998876653221 2245566666666663
No 52
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.17 E-value=2.6e-07 Score=76.49 Aligned_cols=139 Identities=19% Similarity=0.293 Sum_probs=81.1
Q ss_pred CccEEeCcCCcCCCcCchh---hhcCCCccEEeccCCcCCCCCchhh-cCCCCCCEEEccCCcCccccchhhhhhhhccc
Q 005619 357 ALETLDLRDNYFFGRIPHQ---INEHSNLRALLLRGNYLQGPIPHQL-CQLRKLSIMDLSHNRLNGSIPACITNLLFWKV 432 (688)
Q Consensus 357 ~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~ls~n~l~~~~p~~l~~l~~~~~ 432 (688)
.+..++|+.|++ +.+++. +.....|+..+|++|.+.. .|..| ...+.++.+++++|.++ .+|..+..
T Consensus 28 E~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa------ 98 (177)
T KOG4579|consen 28 ELHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAA------ 98 (177)
T ss_pred Hhhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhh------
Confidence 355666666665 223333 2333456666777777763 33333 33456777777777776 56665543
Q ss_pred CCcccccceeEEecccccccccccccceecccCCCCCCCCCcceEEEeeeccccccccccccccccEEEccCCcccccCC
Q 005619 433 GSRYLSGFVMVVMDLGVADIRNYYNSTVQLSLDGIDGRSLGTQVEVNFMTKNRYESYKGVILDYMAGLDLSSNKLTGDIP 512 (688)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 512 (688)
++.|+.|+++.|.+. ..|
T Consensus 99 -------------------------------------------------------------m~aLr~lNl~~N~l~-~~p 116 (177)
T KOG4579|consen 99 -------------------------------------------------------------MPALRSLNLRFNPLN-AEP 116 (177)
T ss_pred -------------------------------------------------------------hHHhhhcccccCccc-cch
Confidence 355667777777776 456
Q ss_pred hhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCC
Q 005619 513 SEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELH 567 (688)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 567 (688)
..+..|.++-.|+..+|.+. .+|..+---+..-..++.++.+.+.-+..++.+.
T Consensus 117 ~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 117 RVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred HHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccccC
Confidence 66666778888888888877 4443322222333345566777766665554443
No 53
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.13 E-value=3.8e-07 Score=84.51 Aligned_cols=87 Identities=22% Similarity=0.133 Sum_probs=41.7
Q ss_pred cCccceEeeecCccccCC----chhccCCCCccEEeCcCCcCCCcCchhh------hcCCCccEEeccCCcCCCCCchh-
Q 005619 331 LSSVEHLYLQSNALGGSI----PNTIFRGSALETLDLRDNYFFGRIPHQI------NEHSNLRALLLRGNYLQGPIPHQ- 399 (688)
Q Consensus 331 ~~~L~~L~L~~n~l~~~~----~~~~~~~~~L~~L~l~~n~l~~~~~~~~------~~l~~L~~L~L~~n~l~~~~~~~- 399 (688)
+.+|+.|++..|.++-.. ...++.++.|+.|.+.+|-++......+ ...|+|..|-..+|.+.+.+-..
T Consensus 213 ~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~ 292 (388)
T COG5238 213 SHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDI 292 (388)
T ss_pred hCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeee
Confidence 444555555555443221 1233344555666666665544333222 12355666666666554322111
Q ss_pred ----h--cCCCCCCEEEccCCcCc
Q 005619 400 ----L--CQLRKLSIMDLSHNRLN 417 (688)
Q Consensus 400 ----~--~~l~~L~~L~ls~n~l~ 417 (688)
+ ..++-|..|.+.+|++.
T Consensus 293 ~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 293 SLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred chhhhhhcccHHHHHHHHccCcch
Confidence 1 23555666667777765
No 54
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.12 E-value=1e-06 Score=97.10 Aligned_cols=110 Identities=16% Similarity=0.102 Sum_probs=53.6
Q ss_pred CCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcchhhhCCCCCCEE
Q 005619 18 TSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPNFLLHQFNLKYL 97 (688)
Q Consensus 18 ~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~~~~l~~L~~L 97 (688)
.+|++||+++...-...-|...-..|++|+.|.+++-.+....-...+.++++|..||+|+++++.+ ..+.++++|+.|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L 200 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVL 200 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHH
Confidence 3566666665443221122122223566666666554433222222345556666666666666555 445566666666
Q ss_pred ECCCCcCCC-CCchHHhhCCCCCcEEEccCCCC
Q 005619 98 DLSHNKLAG-NFPTWLLENNTKLEVLYLTNNSF 129 (688)
Q Consensus 98 ~Ls~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l 129 (688)
.+.+-.+.. ..-..+| ++++|++||+|....
T Consensus 201 ~mrnLe~e~~~~l~~LF-~L~~L~vLDIS~~~~ 232 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLF-NLKKLRVLDISRDKN 232 (699)
T ss_pred hccCCCCCchhhHHHHh-cccCCCeeecccccc
Confidence 665555442 1112233 556666666655443
No 55
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.08 E-value=1.1e-07 Score=93.47 Aligned_cols=293 Identities=18% Similarity=0.111 Sum_probs=162.9
Q ss_pred ceeEEECCCCCC---CCcchhhhCCCCCCEEECCCCc-CCCCCchHHhhCCCCCcEEEccCC-CCCCCC---CCCCCCCc
Q 005619 70 QLKVLSLPNCNL---GVIPNFLLHQFNLKYLDLSHNK-LAGNFPTWLLENNTKLEVLYLTNN-SFSGFQ---LTSAQHGL 141 (688)
Q Consensus 70 ~L~~L~l~~n~l---~~lp~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~L~~n-~l~~~~---~~~~~~~L 141 (688)
.|+.|.+.++.= ..+-....+++++++|++.++. +++..-..+...+++|++|++..| .+++.. ....+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 456666666543 2233344556666666666654 222222233445666666666663 333321 12256667
Q ss_pred CEEEccCCC-CCCCCChhhhhcCCCCCEEEccCCCCCcccchhh----hcCCCCCEEEccCCc-CccccCchhhcCCCCC
Q 005619 142 ISLDISSNN-FTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSI----GKMQGLRLLDVSSNK-FAGELSQSPVTNCFSL 215 (688)
Q Consensus 142 ~~L~ls~n~-~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l----~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L 215 (688)
++++++.+. +++.--..+..++..++.+.+.+|.-. ..+.+ +.+..+..+++..+. +++.--..+-..+..|
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~--~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~l 296 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLEL--ELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHAL 296 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccccc--cHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHh
Confidence 777766653 343333344445666777766665311 11222 234456666766653 2211111223457788
Q ss_pred CEEEcccCcCC-CcCcccc-cCCCCCCEEeccCCc-CCCcccccc-cCCCCCCEEEccCCcCCCC--CchhhhCCcCCcE
Q 005619 216 EWLQLSNNNFD-GQIFPNY-VNLTRLLFLYLDNNH-FSGKIKDGL-LRSSELMVLDISNNHLSGH--IPSWMGNFSNLYI 289 (688)
Q Consensus 216 ~~L~L~~n~i~-~~~~~~~-~~l~~L~~L~L~~n~-l~~~~~~~~-~~~~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~ 289 (688)
+.|+.+++.-. ......+ .++++|+.|.++.++ ++......+ .+++.|+.+++..+..... +...-.+++.|+.
T Consensus 297 q~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ 376 (483)
T KOG4341|consen 297 QVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRV 376 (483)
T ss_pred hhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhcc
Confidence 99998887542 2222222 467899999998886 332221222 3567899999988765422 2222346889999
Q ss_pred EEccccccCCCC-----cccccCCCCCcEEEccCCcCcccccccc--ccCccceEeeecCcccc--CCchhccCCCCccE
Q 005619 290 LSMSKNLLEGNI-----PVQFNNLAILQILDISENNLSGSMISTL--NLSSVEHLYLQSNALGG--SIPNTIFRGSALET 360 (688)
Q Consensus 290 L~l~~n~l~~~~-----~~~l~~l~~L~~L~Ls~n~l~~~~~~~~--~~~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~ 360 (688)
+.++++...... ...-..+..|+.+.++++.......-.. .+++|+.+++.+++-.. .+...-..++++++
T Consensus 377 lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v 456 (483)
T KOG4341|consen 377 LSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATHLPNIKV 456 (483)
T ss_pred CChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhhCcccee
Confidence 999988653222 2223456778999999987764433222 78899999988875321 22233345666666
Q ss_pred EeCc
Q 005619 361 LDLR 364 (688)
Q Consensus 361 L~l~ 364 (688)
.-+.
T Consensus 457 ~a~~ 460 (483)
T KOG4341|consen 457 HAYF 460 (483)
T ss_pred hhhc
Confidence 5443
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.04 E-value=2.9e-06 Score=56.92 Aligned_cols=36 Identities=39% Similarity=0.681 Sum_probs=16.7
Q ss_pred CCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCccc
Q 005619 520 NIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLN 556 (688)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (688)
+|++|++++|+|+ .+|..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3455555555555 23334455555555555555544
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.00 E-value=5.7e-06 Score=55.50 Aligned_cols=37 Identities=32% Similarity=0.381 Sum_probs=27.2
Q ss_pred cceeEEECCCCCCCCcchhhhCCCCCCEEECCCCcCC
Q 005619 69 FQLKVLSLPNCNLGVIPNFLLHQFNLKYLDLSHNKLA 105 (688)
Q Consensus 69 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~ 105 (688)
++|++|++++|+++.+|..+.++++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCCCC
Confidence 3577788888888777777778888888888888776
No 58
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.85 E-value=9.2e-06 Score=89.67 Aligned_cols=132 Identities=24% Similarity=0.330 Sum_probs=58.2
Q ss_pred CCCEEECCCCcC-CCCCchHHhhCCCCCcEEEccCCCCCCCC---CCCCCCCcCEEEccCCCCCCCCChhhhhcCCCCCE
Q 005619 93 NLKYLDLSHNKL-AGNFPTWLLENNTKLEVLYLTNNSFSGFQ---LTSAQHGLISLDISSNNFTGKLPQNMGIVLPKLDC 168 (688)
Q Consensus 93 ~L~~L~Ls~n~l-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~ 168 (688)
+|++||+++... ....|......+|+|+.|.+++-.+.... ....+++|..||+|+.+++ .+ .++. .+++|+.
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~-nl-~GIS-~LknLq~ 199 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS-NL-SGIS-RLKNLQV 199 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc-Cc-HHHh-ccccHHH
Confidence 445555544332 12223333334455555555444433221 1124455555555555544 22 2222 4555555
Q ss_pred EEccCCCCCc-ccchhhhcCCCCCEEEccCCcCccccCc------hhhcCCCCCCEEEcccCcCCCc
Q 005619 169 MNISKNSFEG-NIPSSIGKMQGLRLLDVSSNKFAGELSQ------SPVTNCFSLEWLQLSNNNFDGQ 228 (688)
Q Consensus 169 L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~------~~~~~l~~L~~L~L~~n~i~~~ 228 (688)
|.+.+=.+.. ..-..+.++++|+.||+|...... .+. +....+|+|+.||.+++.+...
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~-~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNND-DTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeecccccccc-chHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 5554433331 112234455666666665544321 110 0113456777777776666543
No 59
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.84 E-value=3.5e-05 Score=68.73 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=45.7
Q ss_pred CCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCccc-chhhhcCCCCCEEE
Q 005619 116 NTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNI-PSSIGKMQGLRLLD 194 (688)
Q Consensus 116 l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~ 194 (688)
......+||++|.+........++.|..|.+.+|+|+ .|...+...+++|+.|.+.+|++.... -.-+..++.|++|.
T Consensus 41 ~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 41 LDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred ccccceecccccchhhcccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 3445566666666655555555555666666666665 444445445566666666666554210 11234455555555
Q ss_pred ccCCcCc
Q 005619 195 VSSNKFA 201 (688)
Q Consensus 195 L~~n~l~ 201 (688)
+-+|..+
T Consensus 120 ll~Npv~ 126 (233)
T KOG1644|consen 120 LLGNPVE 126 (233)
T ss_pred ecCCchh
Confidence 5555443
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.73 E-value=8.7e-05 Score=75.43 Aligned_cols=73 Identities=14% Similarity=0.287 Sum_probs=46.3
Q ss_pred ccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCC-cCCCCCchhhcCCCCCCE
Q 005619 330 NLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGN-YLQGPIPHQLCQLRKLSI 408 (688)
Q Consensus 330 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~ 408 (688)
.+.++++|++++|.++ .+|. -..+|++|.++++.-...+|..+. ++|+.|.+++| .+. .+|. +|+.
T Consensus 50 ~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP~------sLe~ 116 (426)
T PRK15386 50 EARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLPE------SVRS 116 (426)
T ss_pred HhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-cccc------ccce
Confidence 4577888888888776 5552 224688888887544455565442 47888888877 443 3443 4666
Q ss_pred EEccCCc
Q 005619 409 MDLSHNR 415 (688)
Q Consensus 409 L~ls~n~ 415 (688)
|+++.+.
T Consensus 117 L~L~~n~ 123 (426)
T PRK15386 117 LEIKGSA 123 (426)
T ss_pred EEeCCCC
Confidence 6666554
No 61
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.70 E-value=7.3e-05 Score=66.79 Aligned_cols=85 Identities=22% Similarity=0.365 Sum_probs=41.5
Q ss_pred CCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEE
Q 005619 139 HGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWL 218 (688)
Q Consensus 139 ~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 218 (688)
.+...+||++|.+. .++. + ..++.|.+|.+.+|.|+.+.|.--..+++|+.|.+.+|.+........+..|+.|+.|
T Consensus 42 d~~d~iDLtdNdl~-~l~~-l-p~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR-KLDN-L-PHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchh-hccc-C-CCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCcccee
Confidence 34455666666553 2211 1 1355566666666666654444444445556666666555422222333444555555
Q ss_pred EcccCcCC
Q 005619 219 QLSNNNFD 226 (688)
Q Consensus 219 ~L~~n~i~ 226 (688)
.+-+|.++
T Consensus 119 tll~Npv~ 126 (233)
T KOG1644|consen 119 TLLGNPVE 126 (233)
T ss_pred eecCCchh
Confidence 55554443
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.68 E-value=9.2e-05 Score=64.20 Aligned_cols=62 Identities=15% Similarity=0.292 Sum_probs=22.9
Q ss_pred hhhhhcCCCCCEEEccCCCCCcccchhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcc
Q 005619 157 QNMGIVLPKLDCMNISKNSFEGNIPSSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLS 221 (688)
Q Consensus 157 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 221 (688)
+..+..+++|+.+.+.. .+..+...+|.++++|+.+.+.++ +. .++...|..+++++.+.+.
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~-~i~~~~F~~~~~l~~i~~~ 66 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT-SIGDNAFSNCKSLESITFP 66 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS-CE-TTTTTT-TT-EEEEET
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cc-ccceeeeeccccccccccc
Confidence 33344444555555542 233333444445545555555443 32 3444444444445544443
No 63
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.63 E-value=0.00013 Score=63.29 Aligned_cols=123 Identities=17% Similarity=0.221 Sum_probs=55.5
Q ss_pred hhhhcCCCCCEEEccCCcCccccCchhhcCCCCCCEEEcccCcCCCcCcccccCCCCCCEEeccCCcCCCcccccccCCC
Q 005619 182 SSIGKMQGLRLLDVSSNKFAGELSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNLTRLLFLYLDNNHFSGKIKDGLLRSS 261 (688)
Q Consensus 182 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 261 (688)
.+|.++++|+.+.+.. .+. .++...|..+++|+.+.+..+ +.......|.++++++.+.+.+ .+.......|..++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 4566667777777764 344 566666777777777777664 5544555666666677777754 33333444555566
Q ss_pred CCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccCCCCcccccCCCCC
Q 005619 262 ELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLEGNIPVQFNNLAIL 311 (688)
Q Consensus 262 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 311 (688)
+|+.+++..+ +.......|.++ +++.+.+.. .+.......|.++++|
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 6777766554 333344455555 666666654 3333445556665554
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.48 E-value=0.0005 Score=70.00 Aligned_cols=78 Identities=14% Similarity=0.196 Sum_probs=54.1
Q ss_pred ccCCCCCcEEEccCCcCccccccccccCccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccE
Q 005619 305 FNNLAILQILDISENNLSGSMISTLNLSSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRA 384 (688)
Q Consensus 305 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 384 (688)
+..+.+++.|++++|.++..+ . -..+|++|.+++|.--..+|..+ .++|+.|++++|.....+| .+|+.
T Consensus 48 ~~~~~~l~~L~Is~c~L~sLP-~--LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP------~sLe~ 116 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESLP-V--LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP------ESVRS 116 (426)
T ss_pred HHHhcCCCEEEeCCCCCcccC-C--CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc------cccce
Confidence 455788999999999877654 2 24579999998865434666554 3589999999983323444 35777
Q ss_pred EeccCCcCC
Q 005619 385 LLLRGNYLQ 393 (688)
Q Consensus 385 L~L~~n~l~ 393 (688)
|++.++...
T Consensus 117 L~L~~n~~~ 125 (426)
T PRK15386 117 LEIKGSATD 125 (426)
T ss_pred EEeCCCCCc
Confidence 888766543
No 65
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.05 E-value=0.00036 Score=65.31 Aligned_cols=90 Identities=22% Similarity=0.230 Sum_probs=38.3
Q ss_pred chhhcCCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCC--CcccccccCCCCCcceeEEECCCCCCCCcc--h
Q 005619 11 PSVIANLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEA--DLLQVKIENCLPTFQLKVLSLPNCNLGVIP--N 86 (688)
Q Consensus 11 ~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~--~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp--~ 86 (688)
......+..|+.|.+.+..++. ...+..|++|+.|++|.|. .......- ...+++|++|++++|++..+. .
T Consensus 36 ~gl~d~~~~le~ls~~n~gltt----~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl-~e~~P~l~~l~ls~Nki~~lstl~ 110 (260)
T KOG2739|consen 36 GGLTDEFVELELLSVINVGLTT----LTNFPKLPKLKKLELSDNYRRVSGGLEVL-AEKAPNLKVLNLSGNKIKDLSTLR 110 (260)
T ss_pred ccccccccchhhhhhhccceee----cccCCCcchhhhhcccCCcccccccceeh-hhhCCceeEEeecCCccccccccc
Confidence 3334444455555555444432 2234455555555555552 22222211 122355555555555553211 1
Q ss_pred hhhCCCCCCEEECCCCcCC
Q 005619 87 FLLHQFNLKYLDLSHNKLA 105 (688)
Q Consensus 87 ~~~~l~~L~~L~Ls~n~l~ 105 (688)
.+..+.+|..||+.+|..+
T Consensus 111 pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 111 PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcchhhhhcccCCcc
Confidence 1334444555555555443
No 66
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.91 E-value=0.00018 Score=78.27 Aligned_cols=187 Identities=24% Similarity=0.088 Sum_probs=92.3
Q ss_pred CCCCCCEEECCCCcCCCCC-chHHhhCCCCCcEEEccCC-C-CCCC-----CCCCCCCCcCEEEccCCC-CCCCCChhhh
Q 005619 90 HQFNLKYLDLSHNKLAGNF-PTWLLENNTKLEVLYLTNN-S-FSGF-----QLTSAQHGLISLDISSNN-FTGKLPQNMG 160 (688)
Q Consensus 90 ~l~~L~~L~Ls~n~l~~~~-~~~~~~~l~~L~~L~L~~n-~-l~~~-----~~~~~~~~L~~L~ls~n~-~~~~~~~~~~ 160 (688)
.++.|+.|.+..+.-.... -..+...++.|+.|+++++ . .... .....+.+|+.|+++.+. +++..-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 3566666666665322111 1223345666777776652 1 1111 112255677777777766 5544445555
Q ss_pred hcCCCCCEEEccCCC-CCcccch-hhhcCCCCCEEEccCCcCcc-c-cCchhhcCCCCCCEEEcccCcCCCcCcccccCC
Q 005619 161 IVLPKLDCMNISKNS-FEGNIPS-SIGKMQGLRLLDVSSNKFAG-E-LSQSPVTNCFSLEWLQLSNNNFDGQIFPNYVNL 236 (688)
Q Consensus 161 ~~l~~L~~L~l~~n~-l~~~~~~-~l~~l~~L~~L~L~~n~l~~-~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 236 (688)
..+++|++|.+.++. ++...-. ....++.|++|+++++.... . +... ..++++++.+.+....- +
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~-~~~c~~l~~l~~~~~~~----------c 334 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEAL-LKNCPNLRELKLLSLNG----------C 334 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHH-HHhCcchhhhhhhhcCC----------C
Confidence 457778877766665 4433222 23356778888887765421 1 1122 34466666654433221 3
Q ss_pred CCCCEEeccCCcCC---CcccccccCCCCCCEEEccCCcCCCCC-chhhhCCcCC
Q 005619 237 TRLLFLYLDNNHFS---GKIKDGLLRSSELMVLDISNNHLSGHI-PSWMGNFSNL 287 (688)
Q Consensus 237 ~~L~~L~L~~n~l~---~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L 287 (688)
+.++.+.+...... .........++.++.+.+..+...... ...+..++.|
T Consensus 335 ~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 335 PSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred ccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 33444444333221 112223455667777777666633222 2334445555
No 67
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.82 E-value=0.00021 Score=77.77 Aligned_cols=188 Identities=21% Similarity=0.138 Sum_probs=77.1
Q ss_pred cCCCCCEEEccCCc-CccccCchhhcCCCCCCEEEcccCc-CCCcCcc-cccCCCCCCEEeccCCcCCC--cccccccCC
Q 005619 186 KMQGLRLLDVSSNK-FAGELSQSPVTNCFSLEWLQLSNNN-FDGQIFP-NYVNLTRLLFLYLDNNHFSG--KIKDGLLRS 260 (688)
Q Consensus 186 ~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~-~~~~l~~L~~L~L~~n~l~~--~~~~~~~~~ 260 (688)
.+++|+.|+++.+. +++..-......|++|+.|.+.++. ++..... ....++.|++|+++.+.... ........+
T Consensus 241 ~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c 320 (482)
T KOG1947|consen 241 ICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNC 320 (482)
T ss_pred hcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhC
Confidence 34555555555544 3211111222235555555555444 3322211 12345556666666554321 111122334
Q ss_pred CCCCEEEccCCcCCCCCchhhhCCcCCcEEEccccccC---CCCcccccCCCCCcEEEccCCcCccccc-ccc-ccCccc
Q 005619 261 SELMVLDISNNHLSGHIPSWMGNFSNLYILSMSKNLLE---GNIPVQFNNLAILQILDISENNLSGSMI-STL-NLSSVE 335 (688)
Q Consensus 261 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~~-~~~~L~ 335 (688)
++++.|.+....- ++.++.+.+...... .........+++++.+.+..+....... ... +++.|+
T Consensus 321 ~~l~~l~~~~~~~----------c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~ 390 (482)
T KOG1947|consen 321 PNLRELKLLSLNG----------CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT 390 (482)
T ss_pred cchhhhhhhhcCC----------CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc
Confidence 5555544332211 333333333332211 1222334556666666666665333221 111 444441
Q ss_pred eEeeecCccccCCchhccCCCCccEEeCcCCcCCCc-Cchhhhc-CCCccEEeccCCcCC
Q 005619 336 HLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGR-IPHQINE-HSNLRALLLRGNYLQ 393 (688)
Q Consensus 336 ~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~-l~~L~~L~L~~n~l~ 393 (688)
..+.. .......++.|+++.+..... .-..... +..++.+++.++...
T Consensus 391 -~~l~~---------~~~~~~~l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~ 440 (482)
T KOG1947|consen 391 -ESLEL---------RLCRSDSLRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVI 440 (482)
T ss_pred -hHHHH---------HhccCCccceEecccCccccccchHHHhhhhhccccCCccCcccc
Confidence 11111 111112267777776653221 1111111 556677777666543
No 68
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.78 E-value=0.00066 Score=63.61 Aligned_cols=86 Identities=21% Similarity=0.285 Sum_probs=42.5
Q ss_pred CCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCC--CCCCCCChhhhhcCCCCCEEEccCCCCCcc-cchhhhcCCCCC
Q 005619 115 NNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSN--NFTGKLPQNMGIVLPKLDCMNISKNSFEGN-IPSSIGKMQGLR 191 (688)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n--~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~ 191 (688)
....|+.|++.+..++.......+++|+.|.++.| ++.+.++.-+- .+|+|+++++++|++... --..+..+.+|.
T Consensus 41 ~~~~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e-~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~ 119 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAE-KAPNLKVLNLSGNKIKDLSTLRPLKELENLK 119 (260)
T ss_pred cccchhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhh-hCCceeEEeecCCccccccccchhhhhcchh
Confidence 34455555555555554444445556666666666 34433333332 346666666666665520 011133444555
Q ss_pred EEEccCCcCc
Q 005619 192 LLDVSSNKFA 201 (688)
Q Consensus 192 ~L~L~~n~l~ 201 (688)
.|++.+|..+
T Consensus 120 ~Ldl~n~~~~ 129 (260)
T KOG2739|consen 120 SLDLFNCSVT 129 (260)
T ss_pred hhhcccCCcc
Confidence 5555555433
No 69
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.00017 Score=67.62 Aligned_cols=79 Identities=24% Similarity=0.242 Sum_probs=36.4
Q ss_pred CCCCCcEEEccCCCCCCCCCCCCCCCcCEEEccCCCCCCCCC-hhhhhcCCCCCEEEccCCCCCcccch-----hhhcCC
Q 005619 115 NNTKLEVLYLTNNSFSGFQLTSAQHGLISLDISSNNFTGKLP-QNMGIVLPKLDCMNISKNSFEGNIPS-----SIGKMQ 188 (688)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~~~~~~~L~~L~ls~n~~~~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~-----~l~~l~ 188 (688)
+++.|++|.|+-|+++.......|++|++|.|..|.|. .+. -...+++|+|+.|.|..|.-.+..+. .+.-++
T Consensus 39 kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~-sldEL~YLknlpsLr~LWL~ENPCc~~ag~nYR~~VLR~LP 117 (388)
T KOG2123|consen 39 KMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIE-SLDELEYLKNLPSLRTLWLDENPCCGEAGQNYRRKVLRVLP 117 (388)
T ss_pred hcccceeEEeeccccccchhHHHHHHHHHHHHHhcccc-cHHHHHHHhcCchhhhHhhccCCcccccchhHHHHHHHHcc
Confidence 44444444444444444433334444444444444443 221 11223566666666666655443332 233455
Q ss_pred CCCEEE
Q 005619 189 GLRLLD 194 (688)
Q Consensus 189 ~L~~L~ 194 (688)
+|+.||
T Consensus 118 nLkKLD 123 (388)
T KOG2123|consen 118 NLKKLD 123 (388)
T ss_pred cchhcc
Confidence 555554
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.54 E-value=0.00025 Score=66.56 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=75.8
Q ss_pred CCCCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCCCcceeEEECCCCCCCCcch--hhhCCCC
Q 005619 16 NLTSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLPTFQLKVLSLPNCNLGVIPN--FLLHQFN 93 (688)
Q Consensus 16 ~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~lp~--~~~~l~~ 93 (688)
++.+.+.|+.-++.+++ .+...+++.|++|.||-|.+..-. .+..|++|+.|+|..|.|..+.+ -+.++++
T Consensus 17 dl~~vkKLNcwg~~L~D----Isic~kMp~lEVLsLSvNkIssL~---pl~rCtrLkElYLRkN~I~sldEL~YLknlps 89 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDD----ISICEKMPLLEVLSLSVNKISSLA---PLQRCTRLKELYLRKNCIESLDELEYLKNLPS 89 (388)
T ss_pred HHHHhhhhcccCCCccH----HHHHHhcccceeEEeeccccccch---hHHHHHHHHHHHHHhcccccHHHHHHHhcCch
Confidence 45677888998998875 345788999999999988765433 36778899999999999877754 4678889
Q ss_pred CCEEECCCCcCCCCCch----HHhhCCCCCcEEE
Q 005619 94 LKYLDLSHNKLAGNFPT----WLLENNTKLEVLY 123 (688)
Q Consensus 94 L~~L~Ls~n~l~~~~~~----~~~~~l~~L~~L~ 123 (688)
|+.|-|..|.-.|.-+. .++.-+++|+.||
T Consensus 90 Lr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 90 LRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 99999998877655443 2345677777775
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.93 E-value=0.0028 Score=35.18 Aligned_cols=19 Identities=47% Similarity=0.754 Sum_probs=8.8
Q ss_pred CCeEeCCCCcccccCCcCCC
Q 005619 545 IESLDLSHNKLNGQIPPQLT 564 (688)
Q Consensus 545 L~~L~Ls~N~l~~~~p~~l~ 564 (688)
|++|||++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 445555555555 3443343
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.55 E-value=0.0038 Score=34.65 Aligned_cols=20 Identities=60% Similarity=0.760 Sum_probs=10.1
Q ss_pred CCeeeCCCCcCccCCCccccC
Q 005619 521 IHGLNLSHNFLSGSIPESFSN 541 (688)
Q Consensus 521 L~~L~Ls~N~l~~~~p~~~~~ 541 (688)
|+.|||++|+++ .+|..|++
T Consensus 2 L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp ESEEEETSSEES-EEGTTTTT
T ss_pred ccEEECCCCcCE-eCChhhcC
Confidence 455555555555 44444443
No 73
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.36 E-value=0.00054 Score=72.60 Aligned_cols=60 Identities=32% Similarity=0.407 Sum_probs=34.3
Q ss_pred ccEEEccCCccccc----CChhhhcc-CCCCeeeCCCCcCccCC----CccccCCCCCCeEeCCCCccc
Q 005619 497 MAGLDLSSNKLTGD----IPSEICDL-QNIHGLNLSHNFLSGSI----PESFSNLKMIESLDLSHNKLN 556 (688)
Q Consensus 497 L~~LdLs~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 556 (688)
+..+++++|.+.+. ....+..+ ..++.++++.|+|+..- ...+..++.++.+.++.|.+.
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 34466666666532 22333444 45667777777776432 334555667777777777666
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.54 E-value=0.039 Score=28.31 Aligned_cols=14 Identities=36% Similarity=0.539 Sum_probs=4.9
Q ss_pred eeEEECCCCCCCCc
Q 005619 71 LKVLSLPNCNLGVI 84 (688)
Q Consensus 71 L~~L~l~~n~l~~l 84 (688)
|+.|++++|+++++
T Consensus 3 L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 3 LRTLDLSNNRLTSL 16 (17)
T ss_dssp -SEEEETSS--SSE
T ss_pred cCEEECCCCCCCCC
Confidence 44444444444433
No 75
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.50 E-value=0.0035 Score=57.51 Aligned_cols=84 Identities=20% Similarity=0.236 Sum_probs=72.2
Q ss_pred cccccEEEccCCcccccCChhhhccCCCCeeeCCCCcCccCCCccccCCCCCCeEeCCCCcccccCCcCCCCCCCCCEEe
Q 005619 494 LDYMAGLDLSSNKLTGDIPSEICDLQNIHGLNLSHNFLSGSIPESFSNLKMIESLDLSHNKLNGQIPPQLTELHSLSKFD 573 (688)
Q Consensus 494 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 573 (688)
+...+.||++.|++. -.-..|+.++.|..|++|.|++. ..|..++.+..+..+++..|..+ ..|.++...+.+++++
T Consensus 41 ~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNE 117 (326)
T ss_pred cceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhh
Confidence 455778999999987 34456888899999999999998 78888999999999999999988 6788899999999999
Q ss_pred cCCCcCc
Q 005619 574 VSYNDLS 580 (688)
Q Consensus 574 ls~N~l~ 580 (688)
+-+|++.
T Consensus 118 ~k~~~~~ 124 (326)
T KOG0473|consen 118 QKKTEFF 124 (326)
T ss_pred hccCcch
Confidence 9999864
No 76
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.84 E-value=0.0011 Score=70.24 Aligned_cols=19 Identities=32% Similarity=0.347 Sum_probs=9.7
Q ss_pred hhhhcCCCCCEEEccCCcC
Q 005619 182 SSIGKMQGLRLLDVSSNKF 200 (688)
Q Consensus 182 ~~l~~l~~L~~L~L~~n~l 200 (688)
+.+.....++.++++.|.+
T Consensus 166 ~~L~~~~~l~~l~l~~n~l 184 (478)
T KOG4308|consen 166 AVLEKNEHLTELDLSLNGL 184 (478)
T ss_pred HHHhcccchhHHHHHhccc
Confidence 3344445555555555554
No 77
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.36 E-value=0.15 Score=29.58 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=7.8
Q ss_pred CCCCeEeCCCCcccc
Q 005619 543 KMIESLDLSHNKLNG 557 (688)
Q Consensus 543 ~~L~~L~Ls~N~l~~ 557 (688)
++|+.|+|++|+++.
T Consensus 2 ~~L~~L~L~~N~l~~ 16 (26)
T smart00369 2 PNLRELDLSNNQLSS 16 (26)
T ss_pred CCCCEEECCCCcCCc
Confidence 345555555555553
No 78
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.36 E-value=0.15 Score=29.58 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=7.8
Q ss_pred CCCCeEeCCCCcccc
Q 005619 543 KMIESLDLSHNKLNG 557 (688)
Q Consensus 543 ~~L~~L~Ls~N~l~~ 557 (688)
++|+.|+|++|+++.
T Consensus 2 ~~L~~L~L~~N~l~~ 16 (26)
T smart00370 2 PNLRELDLSNNQLSS 16 (26)
T ss_pred CCCCEEECCCCcCCc
Confidence 345555555555553
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=90.65 E-value=0.18 Score=29.17 Aligned_cols=22 Identities=45% Similarity=0.634 Sum_probs=14.0
Q ss_pred cCCCCeeeCCCCcCccCCCccc
Q 005619 518 LQNIHGLNLSHNFLSGSIPESF 539 (688)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~ 539 (688)
+++|+.|+|++|+|+...+..|
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4567777777777774444444
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=90.65 E-value=0.18 Score=29.17 Aligned_cols=22 Identities=45% Similarity=0.634 Sum_probs=14.0
Q ss_pred cCCCCeeeCCCCcCccCCCccc
Q 005619 518 LQNIHGLNLSHNFLSGSIPESF 539 (688)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~ 539 (688)
+++|+.|+|++|+|+...+..|
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4567777777777774444444
No 81
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=87.99 E-value=0.2 Score=28.35 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=10.5
Q ss_pred CCCCEEEccCCcCccccchh
Q 005619 404 RKLSIMDLSHNRLNGSIPAC 423 (688)
Q Consensus 404 ~~L~~L~ls~n~l~~~~p~~ 423 (688)
++|+.|+|++|+|++..+..
T Consensus 2 ~~L~~L~l~~n~i~~~g~~~ 21 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGASA 21 (24)
T ss_dssp TT-SEEE-TSSBEHHHHHHH
T ss_pred CCCCEEEccCCcCCHHHHHH
Confidence 56666777777666544433
No 82
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=86.63 E-value=0.43 Score=59.81 Aligned_cols=37 Identities=27% Similarity=0.223 Sum_probs=33.7
Q ss_pred eCCCCcccccCCcCCCCCCCCCEEecCCCcCccCCCC
Q 005619 549 DLSHNKLNGQIPPQLTELHSLSKFDVSYNDLSGPIPD 585 (688)
Q Consensus 549 ~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 585 (688)
||++|+|+.+.+..|..+++|+.|+|++|++.|.|..
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L 37 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGL 37 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccccccc
Confidence 6899999988888999999999999999999999964
No 83
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.77 E-value=0.14 Score=46.40 Aligned_cols=34 Identities=26% Similarity=0.194 Sum_probs=15.4
Q ss_pred CCccEEeCcCC-cCCCcCchhhhcCCCccEEeccC
Q 005619 356 SALETLDLRDN-YFFGRIPHQINEHSNLRALLLRG 389 (688)
Q Consensus 356 ~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~ 389 (688)
++|+.|++++| +|+...-.++..+++|+.|.+.+
T Consensus 151 ~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 151 PSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred cchheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 34555555544 23333334444455555554443
No 84
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=84.30 E-value=0.039 Score=50.89 Aligned_cols=83 Identities=17% Similarity=0.103 Sum_probs=50.0
Q ss_pred CccceEeeecCccccCCchhccCCCCccEEeCcCCcCCCcCchhhhcCCCccEEeccCCcCCCCCchhhcCCCCCCEEEc
Q 005619 332 SSVEHLYLQSNALGGSIPNTIFRGSALETLDLRDNYFFGRIPHQINEHSNLRALLLRGNYLQGPIPHQLCQLRKLSIMDL 411 (688)
Q Consensus 332 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 411 (688)
...+.||++.|++. ..-..+..++.+..||++.|++ ...|..++....+..+++..|..+ ..|.++...+.++++++
T Consensus 42 kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~-~~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQI-KFLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQ 118 (326)
T ss_pred ceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhH-hhChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhh
Confidence 34445555555443 2223334445566666666666 445666666666667777666665 56667777777777777
Q ss_pred cCCcCc
Q 005619 412 SHNRLN 417 (688)
Q Consensus 412 s~n~l~ 417 (688)
..|.+.
T Consensus 119 k~~~~~ 124 (326)
T KOG0473|consen 119 KKTEFF 124 (326)
T ss_pred ccCcch
Confidence 777654
No 85
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.11 E-value=0.38 Score=43.72 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=31.8
Q ss_pred CCCCEEeCCCCcCcccccCHHhhccCCCCCEEEccCCCCcccccccCCCC-CcceeEEECCCC
Q 005619 18 TSLEYLALYDNKFKGRLFSFCSLANLSKLEVFQLSMEADLLQVKIENCLP-TFQLKVLSLPNC 79 (688)
Q Consensus 18 ~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~~~~~~~~~~~~~~~-l~~L~~L~l~~n 79 (688)
..++.+|-++..|.. +.++.+.+++.++.|.+.+|.-..+...+.+++ .++|+.|++++|
T Consensus 101 ~~IeaVDAsds~I~~--eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC 161 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMY--EGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGC 161 (221)
T ss_pred ceEEEEecCCchHHH--HHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCC
Confidence 346778888777653 334556666666666666665443332222221 234444444444
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=79.05 E-value=1.6 Score=25.22 Aligned_cols=14 Identities=50% Similarity=0.743 Sum_probs=9.3
Q ss_pred CCCCeEeCCCCccc
Q 005619 543 KMIESLDLSHNKLN 556 (688)
Q Consensus 543 ~~L~~L~Ls~N~l~ 556 (688)
++|+.|+|++|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 45667777777665
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=72.14 E-value=2.5 Score=24.38 Aligned_cols=17 Identities=35% Similarity=0.559 Sum_probs=9.7
Q ss_pred ceeEEECCCCCCCCcch
Q 005619 70 QLKVLSLPNCNLGVIPN 86 (688)
Q Consensus 70 ~L~~L~l~~n~l~~lp~ 86 (688)
+|++|++++|+++++|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 45555666666655554
No 88
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=68.74 E-value=3.9 Score=24.11 Aligned_cols=13 Identities=54% Similarity=0.756 Sum_probs=7.3
Q ss_pred CCCeEeCCCCccc
Q 005619 544 MIESLDLSHNKLN 556 (688)
Q Consensus 544 ~L~~L~Ls~N~l~ 556 (688)
+|++|||++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4555555555554
No 89
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=65.67 E-value=23 Score=36.96 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=56.4
Q ss_pred CCcEEEccccccCCCCcc--cccCCCCCcEEEccCCcCc---cc--cccc---c--ccCccceEeeecCccccCCch---
Q 005619 286 NLYILSMSKNLLEGNIPV--QFNNLAILQILDISENNLS---GS--MIST---L--NLSSVEHLYLQSNALGGSIPN--- 350 (688)
Q Consensus 286 ~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~Ls~n~l~---~~--~~~~---~--~~~~L~~L~L~~n~l~~~~~~--- 350 (688)
.+++|...+|...+.... ....-+..+.+++..-.-. +. .... . ...-+..+.++.|........
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 366777777766554332 2233345555555443210 00 0000 0 223466777777776533222
Q ss_pred hccCCCCccEEeCcCCcCCC----cCchhhhcCCCccEEeccCCcCC
Q 005619 351 TIFRGSALETLDLRDNYFFG----RIPHQINEHSNLRALLLRGNYLQ 393 (688)
Q Consensus 351 ~~~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~ 393 (688)
....-+.+..|++++|.-.. .+|.....-..++....+.|...
T Consensus 435 ~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~p~ 481 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNLPE 481 (553)
T ss_pred hhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCCcc
Confidence 23334778899999987633 23444444456676666666554
No 90
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=63.51 E-value=39 Score=35.38 Aligned_cols=108 Identities=18% Similarity=0.075 Sum_probs=46.0
Q ss_pred CCcCEEEccCCCCCCCCChhhhhcCCCCCEEEccCCCCCcccchhhh---cCCCCCEEEccCCcCccccCchhhc--CCC
Q 005619 139 HGLISLDISSNNFTGKLPQNMGIVLPKLDCMNISKNSFEGNIPSSIG---KMQGLRLLDVSSNKFAGELSQSPVT--NCF 213 (688)
Q Consensus 139 ~~L~~L~ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~L~~n~l~~~~~~~~~~--~l~ 213 (688)
+.+++++++.|.+..+.|..+.. ..--+.++.|.++...-..+. .=..+.+++++.|.....+|...-. .-.
T Consensus 165 pr~r~~dls~npi~dkvpihl~~---p~~pl~lr~c~lsskfis~l~~qsg~~~lteldls~n~~Kddip~~~n~~a~~~ 241 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIHLPQ---PGNPLSLRVCELSSKFISKLLIQSGRLWLTELDLSTNGGKDDIPRTLNKKAGTL 241 (553)
T ss_pred chhhhhccCCCcccccCCccccC---CCCccchhhhhhhhhHHHHhhhhhccccccccccccCCCCccchhHHHHhhhhh
Confidence 44556666666655444433321 001144444444322111110 0123666777776665555543211 112
Q ss_pred CCCEEEcccCcCCC---cCcccccCCCCCCEEeccCCcC
Q 005619 214 SLEWLQLSNNNFDG---QIFPNYVNLTRLLFLYLDNNHF 249 (688)
Q Consensus 214 ~L~~L~L~~n~i~~---~~~~~~~~l~~L~~L~L~~n~l 249 (688)
.++.++.+...+.- ..+-.+..-++++..+++.|..
T Consensus 242 vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~ 280 (553)
T KOG4242|consen 242 VLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGT 280 (553)
T ss_pred hhhcccccccccchhhcccccccccccccchhhhccCCC
Confidence 34555555544331 1111223345566666665543
No 91
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=60.99 E-value=6 Score=41.95 Aligned_cols=81 Identities=22% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCCCCCEEECCCCcCCCCC-chHHhhCCCCCcEEEccCC--CCCCCCCCC--CCCCcCEEEccCCCCCCCCCh------h
Q 005619 90 HQFNLKYLDLSHNKLAGNF-PTWLLENNTKLEVLYLTNN--SFSGFQLTS--AQHGLISLDISSNNFTGKLPQ------N 158 (688)
Q Consensus 90 ~l~~L~~L~Ls~n~l~~~~-~~~~~~~l~~L~~L~L~~n--~l~~~~~~~--~~~~L~~L~ls~n~~~~~~~~------~ 158 (688)
+.+.+..++|++|++...- -..+....|+|+.|+|++| .+....-.. ....|++|-+.+|.+...... .
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf~~~s~yv~~ 295 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTFSDRSEYVSA 295 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccchhhhHHHHHH
Confidence 3344555555555543110 0112234455556666655 222211111 334566666666665432211 1
Q ss_pred hhhcCCCCCEEE
Q 005619 159 MGIVLPKLDCMN 170 (688)
Q Consensus 159 ~~~~l~~L~~L~ 170 (688)
+...+|+|..||
T Consensus 296 i~~~FPKL~~LD 307 (585)
T KOG3763|consen 296 IRELFPKLLRLD 307 (585)
T ss_pred HHHhcchheeec
Confidence 222467776554
No 92
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=58.56 E-value=6.1 Score=41.91 Aligned_cols=66 Identities=21% Similarity=0.288 Sum_probs=29.5
Q ss_pred CCCCcCEEEccCCCCCC-CCChhhhhcCCCCCEEEccCCCCCcccchhhhcC--CCCCEEEccCCcCcc
Q 005619 137 AQHGLISLDISSNNFTG-KLPQNMGIVLPKLDCMNISKNSFEGNIPSSIGKM--QGLRLLDVSSNKFAG 202 (688)
Q Consensus 137 ~~~~L~~L~ls~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l--~~L~~L~L~~n~l~~ 202 (688)
..+.+..++|++|++.. .--..+....|+|+.|+|++|........++.+. ..|++|-+.+|.+..
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcccc
Confidence 33445555555555431 0111233345666666666662111111222222 235666666666553
No 93
>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences. p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].
Probab=48.88 E-value=16 Score=28.47 Aligned_cols=32 Identities=3% Similarity=-0.019 Sum_probs=21.8
Q ss_pred hhhheehhhhhhHHHHHHHhhhhhccchhhHH
Q 005619 634 MVAFYWSFVASCVTVMLGLLAILWVNPYWRRL 665 (688)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (688)
..|.|+..+.+++++++++..+++.+.+|+..
T Consensus 40 ayWpyLA~GGG~iLilIii~Lv~CC~~K~K~~ 71 (98)
T PF07204_consen 40 AYWPYLAAGGGLILILIIIALVCCCRAKHKTS 71 (98)
T ss_pred hhhHHhhccchhhhHHHHHHHHHHhhhhhhhH
Confidence 35777777777777777766666676666643
No 94
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=43.06 E-value=8.6 Score=22.05 Aligned_cols=12 Identities=25% Similarity=0.194 Sum_probs=6.5
Q ss_pred CCCCEEeCCCCc
Q 005619 18 TSLEYLALYDNK 29 (688)
Q Consensus 18 ~~L~~L~Ls~n~ 29 (688)
++|++|+|++|.
T Consensus 2 ~~L~~L~l~~C~ 13 (26)
T smart00367 2 PNLRELDLSGCT 13 (26)
T ss_pred CCCCEeCCCCCC
Confidence 455555555553
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=32.61 E-value=26 Score=45.13 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=27.5
Q ss_pred EccCCcccccCChhhhccCCCCeeeCCCCcCc
Q 005619 501 DLSSNKLTGDIPSEICDLQNIHGLNLSHNFLS 532 (688)
Q Consensus 501 dLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 532 (688)
||++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 68889998777888888999999999998876
No 96
>PF15102 TMEM154: TMEM154 protein family
Probab=28.86 E-value=27 Score=30.15 Aligned_cols=19 Identities=11% Similarity=0.153 Sum_probs=9.1
Q ss_pred HHHHHHhhhhhccchhhHH
Q 005619 647 TVMLGLLAILWVNPYWRRL 665 (688)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~ 665 (688)
++++.+++++.+++|||.+
T Consensus 70 lLLl~vV~lv~~~kRkr~K 88 (146)
T PF15102_consen 70 LLLLSVVCLVIYYKRKRTK 88 (146)
T ss_pred HHHHHHHHheeEEeecccC
Confidence 3333444444455666653
No 97
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=26.38 E-value=29 Score=29.13 Aligned_cols=17 Identities=6% Similarity=0.329 Sum_probs=7.4
Q ss_pred hhhhHHHHHHHhhhhhc
Q 005619 642 VASCVTVMLGLLAILWV 658 (688)
Q Consensus 642 ~~~~~~~~~~~~~~~~~ 658 (688)
++|+++++++++++++|
T Consensus 70 i~gv~aGvIg~Illi~y 86 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISY 86 (122)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34444444444443333
No 98
>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []. This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.
Probab=25.08 E-value=44 Score=21.30 Aligned_cols=8 Identities=13% Similarity=0.239 Sum_probs=2.9
Q ss_pred hhhhhHHH
Q 005619 641 FVASCVTV 648 (688)
Q Consensus 641 ~~~~~~~~ 648 (688)
+.+++++.
T Consensus 12 V~vg~~ii 19 (38)
T PF02439_consen 12 VVVGMAII 19 (38)
T ss_pred HHHHHHHH
Confidence 33333333
No 99
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=21.19 E-value=1e+02 Score=24.66 Aligned_cols=9 Identities=22% Similarity=0.445 Sum_probs=3.5
Q ss_pred hhhhhHHHH
Q 005619 641 FVASCVTVM 649 (688)
Q Consensus 641 ~~~~~~~~~ 649 (688)
+.+|+++++
T Consensus 19 ~LVGVv~~a 27 (102)
T PF15176_consen 19 FLVGVVVTA 27 (102)
T ss_pred hHHHHHHHH
Confidence 333444433
Done!