BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005620
(687 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Query: 36 SIKQQNQFQNKNPNSIL-----KSNRPPARRQNPNFNSNRDDDDDDDDDG----DERQQK 86
S +++NQF + N L ++ P RR + + S R+ + + D+ E +
Sbjct: 492 SFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKY 551
Query: 87 KHKLLHGLDNFSALHSVYDGRRKIPTGSDQMEEKVLKATDTLHGLPVESAGPTTTLPDRK 146
KL H L+ L + R K+ + + KV +A L +P
Sbjct: 552 WQKLRHDLERARLLIELIRKREKL----KREQVKVQQAAMELELMPFNV----------- 596
Query: 147 LLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQ 206
LL LD LQ+KD +F+EPV+ +E+PDY E I+ PMDF+T+R+KL++ Y LEEFE+
Sbjct: 597 LLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEE 656
Query: 207 DVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQDSDD 249
D LI +N M+YNA DTI+ R A + DL + R+ +++
Sbjct: 657 DFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAEN 699
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 72 DDDDDDDDGDERQQKKHKLLHGLDNFSALHSVYDGRRKIPTGSDQMEEKVLKATDTLHGL 131
++D++ E+ + +L H L+ L + R K+ ++E+ ++ T
Sbjct: 510 ENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQVAMELRLT---- 565
Query: 132 PVESAGPTTTLPDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRK 191
P T L L VLD+LQ KD +F++PV E+PDY + I HPMDFAT+RK
Sbjct: 566 ------PLTVL-----LRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRK 614
Query: 192 KLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQDSD 248
+L+A Y L EFE+D LI N M+YNA DT+++R A + D R++ D
Sbjct: 615 RLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVD 671
>sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1
Length = 596
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++LL L +LQ+KD +G F+ PV A P Y II HPMDF T++ K+ A Y +
Sbjct: 140 PIQRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 199
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSIL 233
EF+ D L+C NAM YN PDT+Y++ A+ IL
Sbjct: 200 EFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 230
>sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2
Length = 597
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++LL L +LQ+KD +G F+ PV A P Y II HPMDF T++ K+ A Y +
Sbjct: 140 PIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 199
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSIL 233
EF+ D L+C NAM YN PDT+Y++ A+ IL
Sbjct: 200 EFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 230
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++LL L LQ+KD +G F+ PV A P Y II HPMDF+T++ K+ A Y +
Sbjct: 170 PHQQLLEHFLRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANEYKTIT 229
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSIL 233
EF+ D L+C NAM YN P+T+Y++ A+ +L
Sbjct: 230 EFKADFKLMCDNAMVYNRPETVYYKAAKKLL 260
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 57 PPARRQNPNFNSNRDDD----DDDDDDGDERQQKK--HKLLHGLDNFSALHSVYDGRRKI 110
P RR + S R+ D D +D + ++Q K +L H L+ L + R K+
Sbjct: 555 PLLRRLQTHLQSQRNCDQVGRDSEDKNWALKEQLKSWQRLRHDLERARLLVELIRKREKL 614
Query: 111 PTGSDQMEEKVLKATDTLHGLPVESAGPTTTLPDRKLLLFVLDRLQKKDTYGVFSEPVDP 170
+ ++++ ++ T P LL L++LQ+KDT +FSEPV
Sbjct: 615 KRETIKVQQIAMEMQLT---------------PFLILLRKTLEQLQEKDTGNIFSEPVPL 659
Query: 171 AELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQA 229
+E+PDY + I PMDF T+++ L+A Y ++FE+D LI SN ++YNA DTI++R A
Sbjct: 660 SEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAA 718
>sp|Q6NVM8|BRD9_XENTR Bromodomain-containing protein 9 OS=Xenopus tropicalis GN=brd9 PE=2
SV=1
Length = 596
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++LL + L +LQ+KD G F+ PV P Y II +PMDF+T+++K+ Y +
Sbjct: 152 PLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQNEYKSVT 211
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSIL 233
EF+ D L+C NAM YN P+T+Y++ A+ +L
Sbjct: 212 EFKADFKLMCDNAMTYNRPETVYYKLAKKLL 242
>sp|Q6GLP7|BRD9_XENLA Bromodomain-containing protein 9 OS=Xenopus laevis GN=brd9 PE=2
SV=1
Length = 527
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++LL + L +LQ+KD G F+ PV P Y II +PMDF+T+++K+ Y +
Sbjct: 82 PLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQDEYKSVT 141
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSIL 233
EF+ D L+C NAM YN P+T+Y++ A+ +L
Sbjct: 142 EFKADFKLMCDNAMTYNRPETVYYKLAKKLL 172
>sp|O88665|BRD7_MOUSE Bromodomain-containing protein 7 OS=Mus musculus GN=Brd7 PE=1 SV=1
Length = 651
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++ L ++ +LQ+KD FS PV P Y II HPMDF+T+++K+ Y +E
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSILD-----LAKKDFENLRQDSD 248
E + + L+C+NAM YN P+TIY++ A+ +L L+++ ++L+Q D
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q5R8B0|BRD7_PONAB Bromodomain-containing protein 7 OS=Pongo abelii GN=BRD7 PE=2 SV=1
Length = 651
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++ L ++ +LQ+KD FS PV P Y II HPMDF+T+++K+ Y +E
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSILD-----LAKKDFENLRQDSD 248
E + + L+C+NAM YN P+TIY++ A+ +L L+++ ++L+Q D
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q9NPI1|BRD7_HUMAN Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1
Length = 651
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++ L ++ +LQ+KD FS PV P Y II HPMDF+T+++K+ Y +E
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSILD-----LAKKDFENLRQDSD 248
E + + L+C+NAM YN P+TIY++ A+ +L L+++ ++L+Q D
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q5ZKG2|BRD7_CHICK Bromodomain-containing protein 7 OS=Gallus gallus GN=BRD7 PE=2 SV=1
Length = 651
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 151 VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFL 210
++ +LQ+KD FS PV P Y II +PMDF+T+++K+ Y +EE + + L
Sbjct: 143 LMRQLQRKDPSSFFSFPVTDFIAPGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKL 202
Query: 211 ICSNAMQYNAPDTIYFRQARSILD-----LAKKDFENLRQ 245
+C+NAM YN PDTIY++ A+ +L L+++ ++L+Q
Sbjct: 203 MCTNAMTYNKPDTIYYKAAKKLLHSGMKILSQERIQSLKQ 242
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 151 VLDRLQKKDTYGVFSEPVDP-AE-LPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDV 208
+++ + KK T F PVDP AE +PDY ++I HPMD T++ KLD YS +++F DV
Sbjct: 528 LINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADV 587
Query: 209 FLICSNAMQYNAPDTIYFRQARSILDLAKKDF 240
L+ NA+ YNA + ++ A+++L+ + F
Sbjct: 588 RLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 145 RKLLLFVLD---RLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+L LF+ D RL + +FS+PVD E+ DY E+I PMD +TV K+D Y
Sbjct: 961 RELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTA 1020
Query: 202 EEFEQDVFLICSNAMQYNAPD 222
++F +D+ LICSNA++YN PD
Sbjct: 1021 KDFLKDIDLICSNALEYN-PD 1040
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 145 RKLLLF---VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+L +F V RL + VF++PVDP E+PDY +I PMD ++V K+D Y +
Sbjct: 987 RELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTV 1046
Query: 202 EEFEQDVFLICSNAMQYNAPD 222
+++ +D+ LICSNA++YN PD
Sbjct: 1047 KDYLRDIDLICSNALEYN-PD 1066
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 131 LPVESAGP----TTTLPDRKLLLFVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPM 184
LP + P T+T+ K +L RL + +F+ PVD +L PDY II HPM
Sbjct: 112 LPFTATKPEPVTTSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPM 171
Query: 185 DFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLR 244
D TV+ KL +G YS EF DV L NAM YN D +R A ++ + ++ +
Sbjct: 172 DLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIE 231
Query: 245 QDSDDSEPQP 254
+ S ++ +P
Sbjct: 232 KKSSGTKSEP 241
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 145 RKLLLF---VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+L +F V RL + VF++PVDP E+PDY +I PMD ++V K+D Y +
Sbjct: 636 RELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTV 695
Query: 202 EEFEQDVFLICSNAMQYNAPD 222
+++ +D+ LICSNA++YN PD
Sbjct: 696 KDYLKDIDLICSNALEYN-PD 715
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 145 RKLLLF---VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+L +F V RL + VF++PVDP E+PDY +I PMD ++V K+D Y +
Sbjct: 818 RELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTV 877
Query: 202 EEFEQDVFLICSNAMQYNAPD 222
+++ +D+ LICSNA++YN PD
Sbjct: 878 KDYLRDIDLICSNALEYN-PD 897
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 164 FSEPVDP--AELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVDP + PDY ++I PMD +T++ KL+ YS LEEFE D+ L+ +N YN P
Sbjct: 279 FYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPP 338
Query: 222 DTIYFRQARSILDLAKKDFE 241
T R + ++ K+ +E
Sbjct: 339 GTPVHVMGRQLENVFKEKWE 358
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAE--LPDYHEIIAHPMDFATVRKKLDAGAYSY 200
P +K L ++ +L++ F PVDP + +PDY I+ +PMD T+ KKL + YS
Sbjct: 88 PQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147
Query: 201 LEEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVR 260
+EF D+ L+ SN YN ++ +++ ++ ++ + L D+E QP V+
Sbjct: 148 PQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL----PDAE-QPAAAPVK 202
Query: 261 RGRPPKSLKKSLDSSP 276
KS +KS ++P
Sbjct: 203 -----KSKQKSASTAP 213
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 115 DQMEEKVLKATDTLHGLPVESAGPTTTLPDRKLLLFVLDRLQKKDTYGV-----FSEPVD 169
D +EK+ + D L L ++ P D+ F+LD + + V F PV+
Sbjct: 1475 DLCDEKLKEKEDKLARLE-KAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVN 1533
Query: 170 PAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQA 229
+PDY+++I +PMD T+RK + Y E F DV LI +N+++YN P++ Y + A
Sbjct: 1534 KKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTA 1593
Query: 230 RSILDLA 236
+ I+++
Sbjct: 1594 QEIVNVC 1600
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDT 223
F PV+ + DY++II PMD T+R+ + Y EEF + + LI N+ YN P
Sbjct: 1405 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1464
Query: 224 IYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRRGRPPKSLKKSLDSSPSDRIASE 283
+ ++S+LDL E L++ D + R K++ LD D++A
Sbjct: 1465 SLTQISQSMLDLCD---EKLKEKED-----------KLARLEKAINPLLDD--DDQVAFS 1508
Query: 284 FSSDATLANGGDNV--SWASAHNLRK 307
F D + V SW H + K
Sbjct: 1509 FILDNIVTQKMMAVPDSWPFHHPVNK 1534
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 115 DQMEEKVLKATDTLHGLPVESAGPTTTLPDRKLLLFVLDRLQKKDTYGV-----FSEPVD 169
D +EK+ + D L L ++ P D+ F+LD + + V F PV+
Sbjct: 1496 DLCDEKLKEKEDKLARLE-KAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVN 1554
Query: 170 PAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQA 229
+PDY+++I PMD T+RK + Y E F DV LI +N+++YN P++ Y + A
Sbjct: 1555 KKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTA 1614
Query: 230 RSILDLA 236
+ I+++
Sbjct: 1615 QEIVNVC 1621
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDT 223
F PV+ + DY++II PMD T+R+ + Y EEF + + LI N+ YN P
Sbjct: 1426 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1485
Query: 224 IYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRRGRPPKSLKKSLDSSPSDRIASE 283
+ ++S+LDL E L++ D + R K++ LD D++A
Sbjct: 1486 SLTQISQSMLDLCD---EKLKEKED-----------KLARLEKAINPLLDD--DDQVAFS 1529
Query: 284 FSSDATLANGGDNV--SWASAHNLRK 307
F D + V SW H + K
Sbjct: 1530 FILDNIVTQKMMAVPDSWPFHHPVNK 1555
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 146 KLLLFVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEE 203
K LL V ++L K + F PVD L PDYHEII PMD TV KKL AG Y +
Sbjct: 871 KFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQ 930
Query: 204 FEQDVFLICSNAMQYNAPDTIYFRQARSILDL 235
F D++L+ NA YN ++ ++ + ++
Sbjct: 931 FCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEM 962
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 132 PVESAGPTTTLPDRKLLLF-----VLDRLQKKDTYGVFSEPVDPAELP--DYHEIIAHPM 184
P+ +A T + +LL +L RL VF+ PVD +L DY +I HPM
Sbjct: 120 PISAASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPM 179
Query: 185 DFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFE 241
D TV+ KL +G YS EF DV L SNAM YN P + A D +K FE
Sbjct: 180 DLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMA----DTLRKFFE 232
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 164 FSEPVDPA--ELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD EL DYH+II HPMD +TV++K+D Y + F DV L+ SN +YN P
Sbjct: 334 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPP 393
Query: 222 DTIYFRQARSILDLAKKDFENL 243
D AR + D+ + F +
Sbjct: 394 DHEVVAMARKLQDVFEMRFAKM 415
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II +PMD T++K+L+ Y E QD
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + QA + L K
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 164 FSEPVDPA--ELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD EL DYH+II HPMD +TV++K+D+ Y + F D+ L+ SN +YN P
Sbjct: 333 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPP 392
Query: 222 DTIYFRQARSILDLAKKDFENL 243
D AR + D+ + F +
Sbjct: 393 DHEVVAMARKLQDVFEMRFAKM 414
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II +PMD T++K+L+ Y E QD
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + QA + L K
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
PD +L L+ + F EPV+P +P Y +II +PMDF+T+R KL G YS E
Sbjct: 1589 PDLTFCEIILMELESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSRCE 1648
Query: 203 EFEQDVFLICSNAMQYN 219
EF +D LI SN +N
Sbjct: 1649 EFAEDAELIFSNCQLFN 1665
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 115 DQMEEKVLKATDTLHGLPVESAGPTTTLPDRKLLLFVLDRLQKKDTYGV-----FSEPVD 169
D +EK+ + D L L ++ P D+ F+LD + + V F PV+
Sbjct: 1494 DLCDEKLKEKEDKLARLE-KAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVN 1552
Query: 170 PAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQA 229
+PDY+++I +P+D T+RK + Y E F DV LI +N+++YN P++ Y + A
Sbjct: 1553 KKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTA 1612
Query: 230 RSILDLA 236
+ I+++
Sbjct: 1613 QEIVNIC 1619
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDT 223
F PV+ + DY++II PMD T+R+ + Y EEF + + LI N+ YN P
Sbjct: 1424 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKH 1483
Query: 224 IYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRRGRPPKSLKKSLDSSPSDRIASE 283
+ ++S+LDL E L++ D + R K++ LD D++A
Sbjct: 1484 SLTQISQSMLDLCD---EKLKEKED-----------KLARLEKAINPLLDD--DDQVAFS 1527
Query: 284 FSSDATLANGGDNV--SWASAHNLRK 307
F D + V SW H + K
Sbjct: 1528 FILDNIVTQKMMAVPDSWPFHHPVNK 1553
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 151 VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFL 210
+L LQ F PV+ E+PDY+E I PMD +T+ KL+ Y +EEF D L
Sbjct: 446 ILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARL 505
Query: 211 ICSNAMQYNAPDTIYFRQARSI 232
+C+N YN +T Y++ A +
Sbjct: 506 VCNNCRLYNGENTSYYKYANRL 527
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 145 RKLLLFVLDRLQKKDTYGV-FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+ L+ L+ L ++D + F +PVDP L PDY +I+ +PMD +T+++KLD G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQ 245
++ DV+L+ +NA YN + ++ + ++ +++ + + Q
Sbjct: 1152 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQ 1195
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 145 RKLLLFVLDRLQKKDTYGV-FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+ L+ L+ L ++D + F +PVDP L PDY +I+ +PMD +T+++KLD G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQ 245
++ DV+L+ +NA YN + ++ + ++ +++ + + Q
Sbjct: 1152 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQ 1195
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 145 RKLLLFVLDRLQKKDTYGV-FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+ L+ L+ L ++D + F +PVDP L PDY +I+ +PMD +T+++KLD G Y
Sbjct: 1091 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1150
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQ 245
++ DV+L+ +NA YN + ++ + ++ +++ + + Q
Sbjct: 1151 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQ 1194
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 144 DRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEE 203
D + L ++ ++Q + F EPVDP E PDY+++I PMD + KL++ Y+ L E
Sbjct: 2561 DVEELKNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSE 2620
Query: 204 FEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQDSDD 249
F D+ I N YN ++ +++ A ++ + +N R++ D
Sbjct: 2621 FIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENVFD 2666
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQY--NAP 221
F +PVD E PDY +II PMDF TVR+ LDAG Y EF +D+ LI SNA Y N
Sbjct: 1338 FRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKR 1397
Query: 222 DTIY 225
IY
Sbjct: 1398 SKIY 1401
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 152 LDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLI 211
+D+L D F+ PVD P Y ++A+P D T+R +L Y L +V I
Sbjct: 1173 IDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYI 1232
Query: 212 CSNAMQYNAPDTIYFRQARSILDLAKKDFEN 242
NA +N P+++ R A+ I D K +N
Sbjct: 1233 EHNARTFNEPESVIARSAKKITDQLLKFIKN 1263
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 143 PDRKLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLE 202
P ++ VL LQ + F++ V+ E+PDY+E+I PMD +T+ ++L+A +Y +E
Sbjct: 356 PHFAVMQHVLSELQNHASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTME 415
Query: 203 EFEQDVFLICSNAMQYNAPDTIYFRQARSI 232
EF D L+ +N YN T Y++ A +
Sbjct: 416 EFVYDARLVFNNCRAYNNETTTYYKNANKL 445
>sp|Q60544|TAF1_MESAU Transcription initiation factor TFIID subunit 1 OS=Mesocricetus
auratus GN=TAF1 PE=2 SV=1
Length = 1865
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 115 DQMEEKVLKATDTLHGLPVESAGPTTTLPDRKLLLFVLDRLQKKDTYGV-----FSEPVD 169
D +EK+ + D L L ++ P D+ F+LD + + V F PV+
Sbjct: 1470 DLCDEKLKEKEDKLARLE-KAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVN 1528
Query: 170 PAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDTIYFRQA 229
+PDY+++I PMD T+RK + Y E F DV LI +N+++YN ++ Y + A
Sbjct: 1529 KKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGSESQYTKTA 1588
Query: 230 RSILDLA 236
+ I+++
Sbjct: 1589 QEIVNVC 1595
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAPDT 223
F PV+ + DY++II PMD T+R+ + Y EEF + + LI N+ YN P
Sbjct: 1400 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1459
Query: 224 IYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRRGRPPKSLKKSLDSSPSDRIASE 283
+ ++S+LDL E L++ D + R K++ LD D++A
Sbjct: 1460 SLTQISQSMLDLCD---EKLKEKED-----------KLARLEKAINPLLDD--DDQVAFS 1503
Query: 284 FSSDATLANGGDNV--SWASAHNLRK 307
F D + V SW H + K
Sbjct: 1504 FILDNIVTQKMMAVPDSWPFHHPVNK 1529
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 164 FSEPVDPAELP--DYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD + L DYH+II HPMD +TV++K++ Y +EF DV L+ SN +YN P
Sbjct: 371 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 430
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEPQP 254
D AR + D+ +F + + EP P
Sbjct: 431 DHDVVAMARKLQDVF--EFRYAKMPDEPLEPGP 461
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II PMD T++++L+ Y E QD
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + Q + L K
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 164 FSEPVDPAELP--DYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD + L DYH+II HPMD +TV++K++ Y +EF DV L+ SN +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEPQP 254
D AR + D+ +F + + EP P
Sbjct: 432 DHDVVAMARKLQDVF--EFRYAKMPDEPLEPGP 462
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II PMD T++++L+ Y E QD
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + Q + L K
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 164 FSEPVDPAELP--DYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD + L DYH+II HPMD +TV++K++ Y +EF DV L+ SN +YN P
Sbjct: 371 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 430
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEPQP 254
D AR + D+ +F + + EP P
Sbjct: 431 DHDVVAMARKLQDVF--EFRYAKMPDEPLEPGP 461
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II PMD T++++L+ Y E QD
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + Q + L K
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 164 FSEPVDPAELP--DYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD + L DYH+II HPMD +TV++K++ Y +EF DV L+ SN +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEPQP 254
D AR + D+ +F + + EP P
Sbjct: 432 DHDVVAMARKLQDVF--EFRYAKMPDEPLEPGP 462
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II PMD T++++L+ Y E QD
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + Q + L K
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 164 FSEPVDPAELP--DYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD + L DYH+II HPMD +TV++K++ Y +EF DV L+ SN +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEPQP 254
D AR + D+ +F + + EP P
Sbjct: 432 DHDVVAMARKLQDVF--EFRYAKMPDEPLEPGP 462
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 150 FVLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQD 207
V+ L K F +PVD +L PDYH+II PMD T++++L+ Y E QD
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 208 VFLICSNAMQYNAP--DTIYFRQARSILDLAK 237
+ +N YN P D + Q + L K
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 164 FSEPVDPAE---LPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNA 220
F +PVD AE L DYH+II PMD TV++K+D Y EF DV LI +N +YN
Sbjct: 503 FYKPVD-AEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNP 561
Query: 221 PDTIYFRQARSILDLAKKDFENL 243
PD R + D+ + + N+
Sbjct: 562 PDHDVVAMGRKLQDVFEMRYANI 584
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 164 FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNAP 221
F +PVD +L PDYH+II PMD T++K+L+ Y +E QD + +N YN P
Sbjct: 59 FQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKP 118
Query: 222 DTIYFRQARSILDLAKKDFENLRQDSDDSEP 252
A+++ + + E++ ++ + EP
Sbjct: 119 GEDVVVMAQTLEKVFLQKIESMPKEELELEP 149
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 145 RKLLLFVLDRLQKKDTYGV-FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+ L+ L+ L ++D + F +PVDP L PDY +I+ PMD +T+++KLD G Y
Sbjct: 1055 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEP 1114
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQ 245
++ D++L+ +NA YN + ++ + ++ +++ + + Q
Sbjct: 1115 WQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQ 1158
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 145 RKLLLFVLDRLQKKDTYGV-FSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R+ L+ L+ L ++D + F +PVDP L PDY +I+ PMD +T+++KLD G Y
Sbjct: 1054 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEP 1113
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQ 245
++ D++L+ +NA YN + ++ + ++ +++ + + Q
Sbjct: 1114 WQYIDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQ 1157
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 164 FSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSY-LEEFEQDVFLICSNAMQYNAPD 222
F EPVD ++PDY++II P+D T+ K++++ Y LE F D+ + SNA YN+PD
Sbjct: 423 FKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPD 482
Query: 223 TIYFRQA 229
TIY++ A
Sbjct: 483 TIYYKCA 489
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 163 VFSEPVDPA--ELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYN 219
+F EPVDP E+PDY +I PMD TV+ KL YS +EF DV L +NAM YN
Sbjct: 88 LFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYN 146
>sp|P54816|TBP7_CAEEL Tat-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3
Length = 1291
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 145 RKLLLFV---LDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYL 201
R++ LF L RL + + F EPVDP E DY+EII P+ + +KL+ Y++
Sbjct: 917 RQMRLFFKERLTRLMRDRRFVEFVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHA 976
Query: 202 EEFEQDVFLICSNAMQYNAPDTIYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRR 261
++F D+ LI +NA++YN T + R + + + ++L + D R++ V R
Sbjct: 977 DKFVADLILIQTNALEYNPSTTKDGKLIRQMANTLRDAIDDLIECELDESFVERIETVSR 1036
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 163 VFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLICSNAMQYNA 220
VF PVD +L PDY I HPMD TV+K L +G YS EF DV L +NAM YN
Sbjct: 195 VFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNP 254
Query: 221 PDTIYFRQARSILDLAKKDFENLRQDSDDSEPQPRVKVVRRGRPPKSLK 269
P + D+ K FE R K +++ PP S++
Sbjct: 255 PG----HDVHIMGDILSKLFE------------ARWKTIKKKLPPCSMQ 287
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 151 VLDRLQKKDTYGVFSEPVDPAEL--PDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDV 208
+L+RL + F PVDP L PDY +I HPMD T+R +L G YS +F DV
Sbjct: 168 LLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADV 227
Query: 209 FLICSNAMQYNAPDTIYFRQARSI 232
L SN++ YN P + A+ I
Sbjct: 228 RLTFSNSIAYNPPGNQFHTMAQGI 251
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 146 KLLLFVLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFE 205
K LL ++ Q +D+ F +PVD E PDY +II PMDF TVR+ L+AG Y EF
Sbjct: 1325 KALLILI--FQCEDSEP-FRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEFC 1381
Query: 206 QDVFLICSNAMQY--NAPDTIY 225
+D+ LI SNA Y N IY
Sbjct: 1382 KDIRLIFSNAKAYTPNKRSKIY 1403
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 152 LDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFLI 211
+D+L D F+ PVD P Y ++A+P D T+R +L Y L +V I
Sbjct: 1174 IDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWEVRYI 1233
Query: 212 CSNAMQYNAPDTIYFRQARSILDLAKKDFEN 242
NA +N P+++ R A+ I D K +N
Sbjct: 1234 EHNARTFNEPESVIARSAKKITDQLLKFIKN 1264
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 151 VLDRLQKKDTYGVFSEPVDPAELPDYHEIIAHPMDFATVRKKLDAGAYSYLEEFEQDVFL 210
VL LQ F +PV+ E+PDY+E I PMD +T+ KL+ Y +E+F D L
Sbjct: 352 VLTELQNHAAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYDARL 411
Query: 211 ICSNAMQYNAPDTIYFRQARSI 232
I +N YN +T YF+ A +
Sbjct: 412 IFNNCRAYNGENTSYFKYANRL 433
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,594,803
Number of Sequences: 539616
Number of extensions: 12068380
Number of successful extensions: 54518
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 50234
Number of HSP's gapped (non-prelim): 3086
length of query: 687
length of database: 191,569,459
effective HSP length: 124
effective length of query: 563
effective length of database: 124,657,075
effective search space: 70181933225
effective search space used: 70181933225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)