Your job contains 1 sequence.
>005623
MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST
NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP
PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF
KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV
ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRF
EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA
PLNLAQPAVKKITTNSAASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST
IINNSNDCSSRLAPEGIWPSSPHLNVSLNLFPDSTDDHRIVAAQSVLSGYASSGRPGNTV
IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA
SQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLF
DELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA
TSSKPIASSVEGEGTAISLDSELKSET
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005623
(687 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 1369 4.2e-184 3
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 1306 4.5e-176 2
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 1345 2.5e-175 2
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 1237 6.0e-159 2
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 1229 7.0e-156 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 1010 1.2e-136 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 1007 1.2e-136 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 1018 4.2e-132 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 962 1.8e-131 2
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 982 4.2e-130 2
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 670 2.2e-115 3
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 863 5.7e-115 3
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 923 1.5e-108 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 872 3.1e-106 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 831 3.9e-106 3
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 871 1.9e-104 2
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 854 3.9e-89 2
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 465 6.4e-65 3
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 445 2.0e-62 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 590 2.2e-57 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 411 9.0e-49 2
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 149 1.7e-09 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 145 4.5e-09 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 142 9.5e-09 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 137 3.3e-08 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 138 2.3e-07 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 149 2.6e-07 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 129 4.9e-07 2
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 144 6.6e-07 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 127 7.7e-07 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 138 1.3e-06 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 133 3.0e-06 2
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 95 5.8e-06 2
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 139 1.0e-05 2
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 112 1.6e-05 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 123 2.9e-05 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 129 2.9e-05 1
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 124 4.0e-05 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 118 4.3e-05 2
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 125 4.7e-05 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 128 5.1e-05 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 120 5.6e-05 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 120 5.6e-05 1
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 89 5.7e-05 2
UNIPROTKB|E1BSG1 - symbol:BRWD1 "Uncharacterized protein"... 91 6.4e-05 4
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 122 0.00015 1
TAIR|locus:2116505 - symbol:IAA29 "indole-3-acetic acid i... 119 0.00019 2
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 122 0.00022 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 122 0.00025 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 117 0.00030 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 116 0.00058 1
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 91 0.00066 2
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 1369 (487.0 bits), Expect = 4.2e-184, Sum P(3) = 4.2e-184
Identities = 264/375 (70%), Positives = 301/375 (80%)
Query: 1 MAYVE--PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEA 58
MA VE +FG S SS+ LY ELWK CAGPLVEVPR ERV+YFPQGH+EQL A
Sbjct: 1 MASVEGDDDFGSS-SSRSY--QDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVA 57
Query: 59 STNQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL 117
STNQ + +E P+FDLP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D +
Sbjct: 58 STNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPI 117
Query: 118 PEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYE 177
P KQ HSF KILTASDTSTHGGFSVLRKHATECLP LDMT ATPTQEL +DLHG+E
Sbjct: 118 VGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFE 177
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXX 237
WRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGDAFVFLRGENG+LRVGVRRLA
Sbjct: 178 WRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMP 237
Query: 238 XXXXXXXXMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFK 297
MHLGVLATA+HAV+T+T+F+V+YKPR SQFI+G+NKY+EA+ H FS+G RF+
Sbjct: 238 TSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFR 297
Query: 298 MRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
MRFEGE+SPER FTGTIVG GD S QWP SKWRSL++QWDEP TVQRP++VSPWEIEPF+
Sbjct: 298 MRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFL 357
Query: 358 ASAPLNLA--QPAVK 370
A++P++ QP K
Sbjct: 358 ATSPISTPAQQPQSK 372
Score = 411 (149.7 bits), Expect = 4.2e-184, Sum P(3) = 4.2e-184
Identities = 81/113 (71%), Positives = 93/113 (82%)
Query: 561 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWA 620
+ ++Q ++R+RTKVQMQGIAVGRAVDLT LK YD+L DELE+MFEIQGQL RDKW
Sbjct: 478 SMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWI 537
Query: 621 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 673
VVFTDDEGDMMLAGDD W EFCKM KKIFIYS++EVK M T K I+SS+E E
Sbjct: 538 VVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLK-ISSSLENE 589
Score = 44 (20.5 bits), Expect = 4.2e-184, Sum P(3) = 4.2e-184
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 499 LFGIDLKHNSNTAAPLGRKVVDPTTGTS 526
LFG DL NS P ++ +D T G +
Sbjct: 442 LFGFDLTSNSPAPIPQDKQPMD-TCGAA 468
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 1306 (464.8 bits), Expect = 4.5e-176, Sum P(2) = 4.5e-176
Identities = 265/424 (62%), Positives = 304/424 (71%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTHQEPLFDLPSKI 77
G LY ELWK CAGPLV+VP+ ERVYYFPQGH+EQLEAST Q +L +PLF LP KI
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
LC V+++ L AE++TDEVYAQITL P T+ EP SPD PE + VHSF K+LTASD
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASD 124
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAH 256
WSTFVTSKRLVAGD FVFLRGENGELRVGVRR MHLGVLATA H
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
A +T T+FIVYYKPRTSQFII LNKYLEA+ + FSVGMRFKMRFEGEDSPERR++GT++G
Sbjct: 245 ATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIG 304
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS--APLN--LAQPAVKKI 372
V D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV S P + L +++
Sbjct: 305 VKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPRQV 364
Query: 373 TTNSA------ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNSN 426
+ SA AS W TQ H+ Q T SS Q R + S +NNS
Sbjct: 365 SEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWLNNSY 423
Query: 427 DCSS 430
S+
Sbjct: 424 SVSN 427
Score = 426 (155.0 bits), Expect = 4.5e-176, Sum P(2) = 4.5e-176
Identities = 93/180 (51%), Positives = 125/180 (69%)
Query: 485 VERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQ 544
VE+ KK E + LFGIDL +S+ A P + P + K + + SD + ++
Sbjct: 442 VEQ-KKPETTANYRLFGIDLM-SSSLAVP--EEKTAPMRPINISKPTMDSHSDPKSEISK 497
Query: 545 DLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELE 604
+E K+ A+ S KE Q+KQ S STR+RTKVQMQG+ VGRAVDL ALKGY++L D++E
Sbjct: 498 VSEEKKQEPAEGSPKEVQSKQSS--STRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIE 555
Query: 605 KMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 664
K+F+I+G+LR R++W +VFTDDEGDMML GDD WPEFC MVK+IFI+S EEVK M ++
Sbjct: 556 KLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQ 615
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 1345 (478.5 bits), Expect = 2.5e-175, Sum P(2) = 2.5e-175
Identities = 263/385 (68%), Positives = 300/385 (77%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPS 75
G +LY ELWKACAGPLVEVPR GERV+YFPQGH+EQL ASTNQ + QE P+F+LP
Sbjct: 33 GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPP 92
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L EP K TV SF KILTAS
Sbjct: 93 KILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTAS 152
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHATECLP LDMT TPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTT
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAA 255
GWSTFVTSKRLVAGDAFVFLRGE G+LRVGVRRLA M LGVLATA+
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATAS 272
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HAV T+T+F+V+YKPR SQFII +NKY+ A+ + FS+GMR++MRFEGE+SPER FTGTI+
Sbjct: 273 HAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTII 332
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA--PLNLAQPA----- 368
G GD S QWP SKWRSL+IQWDEP+++QRP +VSPWEIEPF SA P Q +
Sbjct: 333 GSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRS 392
Query: 369 --VKKITTNSAASAFWYQGSTQSHD 391
+ +IT + AS+F +QSH+
Sbjct: 393 RPISEITGSPVASSF-LSSFSQSHE 416
Score = 380 (138.8 bits), Expect = 2.5e-175, Sum P(2) = 2.5e-175
Identities = 74/131 (56%), Positives = 95/131 (72%)
Query: 555 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 614
D + + +Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L
Sbjct: 494 DPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS 553
Query: 615 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEG 674
P+DKWA+VFTDDEGD ML GDD W EFCKM KK+FIY ++EVK M SK + +G
Sbjct: 554 PKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMR--SKSLLGD---KG 608
Query: 675 TAISLDSELKS 685
T ++L+S+ ++
Sbjct: 609 TIVNLESDQRT 619
Score = 43 (20.2 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 662 SSKPIASSVEGEGTAISLDSELKSET 687
+SKP ++++ + IS+DS + T
Sbjct: 464 TSKPASATIPHDKQLISVDSNISDST 489
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 1237 (440.5 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 241/361 (66%), Positives = 278/361 (77%)
Query: 14 SQGGPG---SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S G PG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P
Sbjct: 7 SSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPS 66
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LPSKILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK
Sbjct: 67 FNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCK 126
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRR 186
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGV 250
HLLTTGWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR MH+GV
Sbjct: 187 HLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGV 246
Query: 251 LATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATAAHA+ T T+F V+YKPRTS +FI+ +N+YLEA SVGMRFKMRFEGE++PE+
Sbjct: 247 LATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEK 306
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQ 366
RF+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + Q
Sbjct: 307 RFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQ 366
Query: 367 P 367
P
Sbjct: 367 P 367
Score = 333 (122.3 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 91/254 (35%), Positives = 133/254 (52%)
Query: 429 SSRLAPEGIWPSSPHLNVSLNLF-PDS---TDDHRIVAAQSVLSGYA-------SSGRPG 477
S + P+G+W S S+ LF P + T H + V G A S+
Sbjct: 387 SGPVTPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTNADSAAESF 446
Query: 478 NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASD 537
+ + E K++ ++ C LFG +L N N V +G V +++
Sbjct: 447 ASAFNNESTEKKQTNGNV-CRLFGFELVENVNVDECFSAASV---SGAVAVDQPV-PSNE 501
Query: 538 FDASQ-----NQDLKEVKRGMADVSRKETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLT 591
FD+ Q N + ++ G D + ++ Q S + R+ TKV MQG AVGRA+DLT
Sbjct: 502 FDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLT 561
Query: 592 ALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 650
+ Y+DLF +LE+MF+I+G+L KW VV+TDDE DMM+ GDD W EFC MV+KIFI
Sbjct: 562 RSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
Query: 651 YSTEEVKNMATSSK 664
Y+ EEVK ++ +K
Sbjct: 622 YTPEEVKKLSPKNK 635
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 1229 (437.7 bits), Expect = 7.0e-156, Sum P(2) = 7.0e-156
Identities = 247/429 (57%), Positives = 306/429 (71%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR MHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPAVKKITTNSA 377
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ + P K+ +N A
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIA 417
Query: 378 ASAFWYQGSTQSHDITQVVGATEGQSSE---SQVVRPMRQKEIDSTIINNSNDCSSRLAP 434
S S S +T+ G T+ S + R ++ +E ST+ + AP
Sbjct: 418 PS------SPDSSMLTRE-GTTKANMDPLPASGLSRVLQGQEY-STLRTKHTESVECDAP 469
Query: 435 EG--IWPSS 441
E +W SS
Sbjct: 470 ENSVVWQSS 478
Score = 312 (114.9 bits), Expect = 7.0e-156, Sum P(2) = 7.0e-156
Identities = 85/249 (34%), Positives = 129/249 (51%)
Query: 436 GIWPSSPHLNVSLNLFPDSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASL 495
G WP P +LN + + +V AQ+ + T I EE + ++
Sbjct: 607 GNWPIRPR---ALNYYEE------VVNAQAQAQAREQVTKQPFT-IQEETAKSREGN--- 653
Query: 496 GCWLFGIDLKHNSN-TAAPLG-RKVVDPTTGTSGVKG-SARAASDFD--ASQNQDLKEVK 550
C LFGI L +N N T + + R ++ G + + + SD + D +E
Sbjct: 654 -CRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQG 712
Query: 551 RGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ 610
R + ++ Q S+R+ TKV QGIA+GR+VDL+ + Y++L EL+++FE
Sbjct: 713 RPF-QTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFN 771
Query: 611 GQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM---ATSSKPI 666
G+L P+ W +V+TD+E DMML GDD W EFC MV+KIFIY+ EEV+ M S +
Sbjct: 772 GELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSE 831
Query: 667 ASSVEGEGT 675
+V GEG+
Sbjct: 832 EEAVVGEGS 840
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 1010 (360.6 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 198/391 (50%), Positives = 263/391 (67%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE+YA+ITL P+T Q + + P V+SF K+LTASDTS +GG
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP---LVNSFTKVLTASDTSAYGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ P QE+ A DLH +WRF+H +RG P+RH LTTGW+ F+T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFIT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR H M GV+A+A HA
Sbjct: 201 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV DFS
Sbjct: 261 IFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKKITTNSAASAFW 382
W S+WRSL++QWDE A+ RP +VSPWEIE V + LN+ + ++ K + F
Sbjct: 321 HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPA--LNVPRSSLLKNKRLREVNEF- 377
Query: 383 YQGSTQSHDITQVVGATEGQS-SESQVVRPM 412
GS+ SH + ++ T+GQ + V PM
Sbjct: 378 --GSSSSHLLPPIL--TQGQEIGQLSVASPM 404
Score = 349 (127.9 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 74/126 (58%), Positives = 92/126 (73%)
Query: 546 LKEVKR-GMADVSRK--ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 602
L E K+ G + R E Q+KQ S S+RT TKVQMQG+ +GRAVDL+ L GYD L E
Sbjct: 484 LTERKKFGQSQTLRSPIEIQSKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILE 541
Query: 603 LEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 662
LEK+F+I+GQL+ R++W + FTD +G ML GDD WPEFCKMVKKI IYS EEVKN+ S
Sbjct: 542 LEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLK-S 600
Query: 663 SKPIAS 668
SK ++S
Sbjct: 601 SKSLSS 606
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 1007 (359.5 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 196/391 (50%), Positives = 260/391 (66%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST +EL +P+ D PSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E +DE YA+ITL P+T Q + +Q P V+SF K+LTASDTS HGG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRP---LVNSFTKVLTASDTSVHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ PTQE+ A DLHG +WRF+HI+RG +RHLLT GW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR H M G++A+A HA
Sbjct: 201 SKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+ V++ F+VG RF MRFEG+D ERR GTI+GV DFS
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKKITTNSAASAFW 382
W S+WRSL++QWDE A+ RP +VSPW+IE + N+++ + K + +
Sbjct: 321 HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWS--NVSRSSFLKNKRSREVNEI- 377
Query: 383 YQGSTQSHDITQVVGATEGQS-SESQVVRPM 412
GS+ SH + + T+GQ + + PM
Sbjct: 378 --GSSSSHLLPPTL--TQGQEIGQQSMATPM 404
Score = 352 (129.0 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 67/122 (54%), Positives = 90/122 (73%)
Query: 547 KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 606
+E K G + + R T+ + +STRT TKVQMQG+ +GRAVDL+ L GYD L ELEK+
Sbjct: 485 QEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKL 544
Query: 607 FEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPI 666
F+++GQL+ R++W + FT++E D ML G+D WPEFC MVKKIFIYS EEVKN+ S K +
Sbjct: 545 FDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLK-SRKSL 603
Query: 667 AS 668
+S
Sbjct: 604 SS 605
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 1018 (363.4 bits), Expect = 4.2e-132, Sum P(2) = 4.2e-132
Identities = 201/391 (51%), Positives = 265/391 (67%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE++YYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASDTS GG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDTS--GG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA ECLPPLDM+ PTQEL A DLHG +WRF H +RG P+RHLLTTGW+ F T
Sbjct: 139 FFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTT 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKTST 262
SK+LVAGD VF+RGE GELRVG+RR H M GV+A+A HA
Sbjct: 199 SKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQC 258
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV DFS
Sbjct: 259 MFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 318
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKKITTNSAASAFW 382
W S+WR+L++QWDE A+ RP +VSPWEIE + + LN+ +P++ K N
Sbjct: 319 HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPA--LNVPRPSLLK---NKRLREVN 373
Query: 383 YQGSTQSHDITQVVGATEGQS-SESQVVRPM 412
GS+ SH + ++ T+GQ + V PM
Sbjct: 374 EIGSSSSHLLPPIL--TQGQEIGQLSVASPM 402
Score = 298 (110.0 bits), Expect = 4.2e-132, Sum P(2) = 4.2e-132
Identities = 57/112 (50%), Positives = 77/112 (68%)
Query: 541 SQNQDLKEVKR-GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDL 599
S+ L E K+ G + R T+ + +STRT TKVQMQG+ + RAVDL+ L GYD L
Sbjct: 477 SEISKLTEGKKFGQSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQL 536
Query: 600 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIY 651
ELE++F+++GQL+ R++W + FTD + D ML GDD WPEFC MVKKI I+
Sbjct: 537 ILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 962 (343.7 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 188/353 (53%), Positives = 246/353 (69%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE-P-RSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
I L E +DE YA+ITL P+T Q P +S +Q P V+SF K+LTASDTS +
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRP-----LVNSFTKVLTASDTSAY 138
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGF V +KHA ECLPPL + P QEL AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 139 GGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEF 194
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKT 260
TSK+LV GD VF+RGE GELRVG+RR H M GV+A+A HA+
Sbjct: 195 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDN 254
Query: 261 STLFIVYYKP--RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+FIV YKP R+SQFI+ +K+L+A+++ F VG RF MRFEG+D ERR+ GTI+GV
Sbjct: 255 QCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVN 314
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKK 371
DFS W S+WRSL++QWDE A+ RP +VSPWEIE +++ LN+ + ++ K
Sbjct: 315 DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSA--LNVPRSSLLK 365
Score = 348 (127.6 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 73/126 (57%), Positives = 91/126 (72%)
Query: 546 LKEVKR-GMADVSRK--ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 602
L E K+ G + R E Q+KQ STRT TKVQMQG+ +GRAVDL+ L GYD L E
Sbjct: 468 LTEGKKFGQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILE 525
Query: 603 LEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 662
LEK+F+++GQL+ R++W + FTD +G ML GDD WPEFCKMVKKI IYS EEVKN+ S
Sbjct: 526 LEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLK-S 584
Query: 663 SKPIAS 668
SK ++S
Sbjct: 585 SKSLSS 590
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 982 (350.7 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 195/391 (49%), Positives = 257/391 (65%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +E ST +EL +P+ DLPSK+ CRV+
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASDTS HGG
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDTSAHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA ECLP LDM+ P QEL A DLHG +WRF H +RG P+RHLLTTGW+ F T
Sbjct: 141 FFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKTST 262
SK+LVAGD VF+RGE GELRVG+RR H M GV+A+A HA
Sbjct: 201 SKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+F V YKPR+S+FI+ +K+L+AV++ F+VG RF MR EG+D ERR GTI+GV DFS
Sbjct: 261 MFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKKITTNSAASAFW 382
W S+WRSL++QWDE + P++VSPW+IE + + +N+ + + K N
Sbjct: 321 HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPA--INVPRSFLLK---NKRLREVN 375
Query: 383 YQGSTQSHDITQVVGATEGQSSES-QVVRPM 412
GS+ SH + ++ T+GQ +E V PM
Sbjct: 376 EIGSSSSHLLPPIL--TQGQENEQLSVASPM 404
Score = 315 (115.9 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 65/113 (57%), Positives = 81/113 (71%)
Query: 541 SQNQDLKEVKR-GMADVSRKET--QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYD 597
S+ L E K+ G++ R T QNKQ S S+RT TKVQMQG+ +GRAVDL+ L GYD
Sbjct: 479 SEISKLTEGKKFGLSQTLRSPTEIQNKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYD 536
Query: 598 DLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 650
L ELEK+F+I+GQL+ R++W + FTD + D ML GDD WPEFC MVKKIFI
Sbjct: 537 QLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 670 (240.9 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 132/255 (51%), Positives = 168/255 (65%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T TE + + + + + V+ F KILTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDT--TEVMTHNTTM-DTRRPIVYFFSKILTASDVSLSGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 200
+ +++A EC PPLDM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR H M GV+A+ +A KT
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 261 STLFIVYYKPRTSQF 275
+F V YKPR QF
Sbjct: 259 KCMFNVVYKPRM-QF 272
Score = 286 (105.7 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 575 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 634
TKV MQG+A+ RAVDLTA+ GY+ L +LE++F+++ +LR R++W +VFT++EG ML G
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVG 495
Query: 635 DDQWPEFCKMVKKIFIYSTEEVKNMATSSK 664
DD WPEFC M K+IFI S EE+K M +K
Sbjct: 496 DDPWPEFCNMAKRIFICSKEEIKKMKLKNK 525
Score = 216 (81.1 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 39/82 (47%), Positives = 59/82 (71%)
Query: 290 FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
F+V + +M+FEG+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VS
Sbjct: 262 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 321
Query: 350 PWEIEPFVASAPLNLAQPAVKK 371
PW+IE + S+ +++Q ++KK
Sbjct: 322 PWDIEHLIPSS--DISQSSLKK 341
Score = 61 (26.5 bits), Expect = 4.4e-99, Sum P(3) = 4.4e-99
Identities = 28/131 (21%), Positives = 62/131 (47%)
Query: 379 SAFWYQGSTQSHDITQVVGATE-GQSSESQVVRPMRQKEIDSTIINNSNDCSSRLAPEGI 437
S F DI ++ +++ QSS + ++ EI +T+ +N C + +
Sbjct: 312 SPFLRPNQVSPWDIEHLIPSSDISQSSLKKKKHWLQLNEIGATL-SNLWTCQE-IGQRSM 369
Query: 438 WPSSPHLNVSLNLFPDSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKK----SEA 493
+SP ++V +P++ +D + ++ +L ++ P +++ + +K +EA
Sbjct: 370 --NSP-ISVPEFSYPNAIEDSKFLSG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEA 424
Query: 494 SLGCWLFGIDL 504
+ C LFG+DL
Sbjct: 425 TTSCLLFGVDL 435
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 863 (308.9 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 178/378 (47%), Positives = 235/378 (62%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
G S SS + +Y ELW ACAGPL +P+ G V YFPQGH+EQ +A + +
Sbjct: 48 GSSSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEI 106
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQT----EPRSPDQCLPEPP--- 121
P FDL +I+CRVV+++LLA ++TDEVY Q+TL P + + E + + E
Sbjct: 107 PKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNG 166
Query: 122 ----KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYE 177
K+T H FCK LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG E
Sbjct: 167 SSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVE 226
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXX 237
W+F+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLR E GELR+G+RR A
Sbjct: 227 WKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLP 286
Query: 238 XXXXXXXXMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMR 295
+L+ A+AV T ++F V+Y PR + +F+I KY+ ++ +G R
Sbjct: 287 DSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTR 345
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
F+MRFE +DSPERR G + GV D +WP SKWR L ++WDE ERVSPWEI+
Sbjct: 346 FRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEID 405
Query: 355 PFVASAPLNL-AQPAVKK 371
P V+ L++ + P K+
Sbjct: 406 PSVSLPHLSIQSSPRPKR 423
Score = 265 (98.3 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 51/106 (48%), Positives = 71/106 (66%)
Query: 560 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK- 618
ET + ++S R TKV QG VGRA+DL+ L GYDDL ELE++F ++G LR +K
Sbjct: 653 ETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKG 712
Query: 619 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 664
W +++TD E DMM+ GDD W +FC +V KI +Y+ EEV+N +K
Sbjct: 713 WRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
Score = 40 (19.1 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 493 ASLGCWLFGIDLKHNSNTAAP 513
AS GC LFG L + + P
Sbjct: 639 ASSGCKLFGFSLPVETPASKP 659
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 923 (330.0 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 188/369 (50%), Positives = 243/369 (65%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L QG G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD TL P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R MH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP------FVA 358
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + +
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 366
Query: 359 SAPLNLAQP 367
PL L +P
Sbjct: 367 LFPLRLKRP 375
Score = 170 (64.9 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 40/95 (42%), Positives = 54/95 (56%)
Query: 567 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-P-RDKWAVVFT 624
S+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L P R W +VF
Sbjct: 700 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 625 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 659
D E D++L GDD W F V I I S E+V M
Sbjct: 759 DKENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 344 RPERVSPWEIEPFVASAPLNLAQPAVKKITTNSAASAFWYQGSTQSHDITQV 395
RP+ + P + S + L A TNS + F++ ++QS + Q+
Sbjct: 229 RPQTIVPSSVLSS-DSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQL 279
Score = 40 (19.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 49 PQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQ-ITLHPETDQ 107
P Q AS N +L Q+ S+ L ++++E + Q ++ P Q
Sbjct: 465 PHHQYLQQSASHNSDLMLQQQQQQQASRHLMHA-QTQIMSENLPQQNMRQEVSNQPAGQQ 523
Query: 108 TEPRSPDQ 115
+ + PDQ
Sbjct: 524 QQLQQPDQ 531
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 872 (312.0 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
Identities = 173/349 (49%), Positives = 226/349 (64%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 40 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 99
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P + + PD + K FC
Sbjct: 100 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFC 159
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD + PTQEL +DLH W F+HI+RGQP+
Sbjct: 160 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPK 219
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR MH+G
Sbjct: 220 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 279
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSP 306
VLA AAHA T F+++Y PR ++F+I L KY +A+ SVGMRF M FE EDS
Sbjct: 280 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSG 339
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 340 KRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 199 (75.1 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
Identities = 59/172 (34%), Positives = 87/172 (50%)
Query: 507 NSNTAAPLGRKVVDPTTGTSGVKGSARAASDF-DASQNQDLKEVKRGMADVSRKETQNKQ 565
N+NT+ + V T S A + DF D S D S + QN +
Sbjct: 725 NNNTS--FAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLR--QNSK 780
Query: 566 GSA----ASTRTRT--KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK 618
GS+ A+ R RT KVQ G +VGR++D+T+ K Y++L +E MF ++G L P+
Sbjct: 781 GSSWQKIATPRVRTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSS 839
Query: 619 -WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 669
W +V+ D E D++L GDD W EF V+ I I S EV+ M+ + +S
Sbjct: 840 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNS 891
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 831 (297.6 bits), Expect = 3.9e-106, Sum P(3) = 3.9e-106
Identities = 171/368 (46%), Positives = 230/368 (62%)
Query: 6 PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELT 65
P+ G SS G + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ T
Sbjct: 4 PSNGFLPSSNEGEKK-PINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQT 61
Query: 66 HQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPK 122
P + +LPSK++C + + L A+ ETDEVYAQ+TL P + D+ + D L + +
Sbjct: 62 DFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KLNR 120
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
Q FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ AKDLH W F+H
Sbjct: 121 QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH 180
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXX 242
I+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+RR
Sbjct: 181 IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVIS 240
Query: 243 XXXMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRF 300
MH+G+LA AAHA S+ F +++ PR S +F++ L KY +A++ S+GMRF+M F
Sbjct: 241 SDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMF 300
Query: 301 EGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
E ED RR+ GT+ G+ D +W GS+WR+L++ WDE RP RVS WEIEP +
Sbjct: 301 ETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT- 359
Query: 360 APLNLAQP 367
P + P
Sbjct: 360 -PFYICPP 366
Score = 212 (79.7 bits), Expect = 3.9e-106, Sum P(3) = 3.9e-106
Identities = 51/118 (43%), Positives = 72/118 (61%)
Query: 572 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-P-RDKWAVVFTDDEGD 629
RT TKVQ +G +VGR++D+T GYD+L +L +MF I+GQL P W +V+TD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 630 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 687
++L GDD W EF V+ I I S+ EV+ M S++G+ AI ++ SET
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPTTNQACSET 1065
Score = 41 (19.5 bits), Expect = 3.9e-106, Sum P(3) = 3.9e-106
Identities = 14/68 (20%), Positives = 26/68 (38%)
Query: 513 PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTR 572
P G K+ + G KG ++ S Q Q E+ + ++ Q+ S
Sbjct: 565 PTGAKMTHQNINSMGNKGLSQMTSFAQEMQFQQQLEMHNSSQLLRNQQEQSSLHSLQQNL 624
Query: 573 TRTKVQMQ 580
++ Q+Q
Sbjct: 625 SQNPQQLQ 632
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 871 (311.7 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 177/358 (49%), Positives = 234/358 (65%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q +P P + L P +Q + FCK LTASDTST
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAE-LGVPSRQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXXXXXXXMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ + +L +G+RR MHLG+LA AAHA
Sbjct: 201 FVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S +F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP------FVASAPLNLAQP 367
+ D +W S WRS+K+ WDE +R RVS WEIEP + + PL L +P
Sbjct: 321 ICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRP 378
Score = 183 (69.5 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 57/193 (29%), Positives = 86/193 (44%)
Query: 499 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQ-NQDLK-----EVKRG 552
LFG+++ +S+ P G + G++G F +S N D
Sbjct: 720 LFGVNID-SSSLLMPNGMS----NLRSIGIEGGDSTTLPFTSSNFNNDFSGNLAMTTPSS 774
Query: 553 MADVSR--KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ 610
D S + ++N + T KV G + GR++D++ Y +L EL +MF ++
Sbjct: 775 CIDESGFLQSSENLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLE 833
Query: 611 GQLR-P-RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIAS 668
GQL P R W +VF D E D++L GDD WPEF V I I S +EV+ M + +
Sbjct: 834 GQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLN 893
Query: 669 SVEGEGTAISLDS 681
S L S
Sbjct: 894 SAPSSNNVDKLPS 906
Score = 44 (20.5 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 519 VDPTTGTSGVKGSARAASD-FDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKV 577
+ P TSG+ G A+ QD++ + A S + QN G + + + +
Sbjct: 422 MQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDPAKAAASLLQFQNSPGFSMQSPSLVQP 481
Query: 578 QM 579
QM
Sbjct: 482 QM 483
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 854 (305.7 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 191/474 (40%), Positives = 268/474 (56%)
Query: 11 SLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S+ S G G + ELW ACAGPL+ +P+ G V YFPQGH+EQ +
Sbjct: 40 SVVSSNSAGGG-VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAI 91
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPK 122
+ LP + CR++ ++L AE TDEVYAQ++L PE++ E + + + E K
Sbjct: 92 YGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLK 151
Query: 123 Q--TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
+ T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF
Sbjct: 152 RSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRF 211
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHXXXXXXXXX 240
+HI+RGQPRRHLLTTGWS FV K+LV+GDA +FLRG++G+LR+GVRR +
Sbjct: 212 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSA 271
Query: 241 XXXXXMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKM 298
M+ + AHA+ T ++F + Y P+ S FII K+L+ V + F +GMRFK
Sbjct: 272 QYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKA 331
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R E ED+ ERR G I G+ D +WPGSKWR L ++WD+ +RVSPWEIEP
Sbjct: 332 RVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP-- 389
Query: 358 ASAPLNLAQPAVKKITTNSAASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 417
S ++ + V TT S + +++ + AT+ + S + R ++ +EI
Sbjct: 390 -SGSISNSGSFV---TTGPKRSRIGFSSGKPDIPVSEGIRATDFEES-LRFQRVLQGQEI 444
Query: 418 DSTIINNSNDCSSRLAPEGIWPSSPHLNVSLNLFPDSTDDHRIVAAQSVLSGYA 471
IN +D + A G + + F DS H+++ Q + Y+
Sbjct: 445 FPGFINTCSDGGAG-ARRGRFKGTE--------FGDSYGFHKVLQGQETVPAYS 489
Score = 55 (24.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 497 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 556
C LFG L T A V G S +KG++ S+ SQ +D+ ++ + D+
Sbjct: 550 CRLFGFPL--TDETTAVASATAVPCVEGNS-MKGASAVQSNHHHSQGRDIYAMRDMLLDI 606
Query: 557 S 557
+
Sbjct: 607 A 607
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 465 (168.7 bits), Expect = 6.4e-65, Sum P(3) = 6.4e-65
Identities = 101/212 (47%), Positives = 126/212 (59%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YF QGH E A + PL ILCRVV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPL------ILCRVVSVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP-EPP--------KQTVHSFCKILTASD 136
LA+ ETDEV+A+ITL P D L PP K+ SF K LT SD
Sbjct: 64 FLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSD 123
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
+ GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 124 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 183
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
WSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 184 WSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 215
Score = 178 (67.7 bits), Expect = 6.4e-65, Sum P(3) = 6.4e-65
Identities = 47/117 (40%), Positives = 61/117 (52%)
Query: 250 VLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
V A A +VYY PR S +F + A+ + GMRFKM FE EDS
Sbjct: 274 VAEAVARAACGQAFEVVYY-PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSR 332
Query: 308 RR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
F GT+ V V D +WP S WR L++ WDEP +Q +RVSPW +E V++ P
Sbjct: 333 ISWFMGTVSAVQVAD-PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMP 387
Score = 102 (41.0 bits), Expect = 6.4e-65, Sum P(3) = 6.4e-65
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 548 EVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF 607
E ++G+ V+R T N T KV M+ VGR +DL+ + Y +L+ +L +MF
Sbjct: 559 EEEKGL--VARGLTWNYSLQGLETG-HCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMF 615
Query: 608 EIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 650
I+ R VV+ D G + GD+ + +F K K++ I
Sbjct: 616 HIEE--RSDLLTHVVYRDANGVIKRIGDEPFSDFMKATKRLTI 656
Score = 39 (18.8 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 630 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 661
+ +A D+ P+ + VK++ + E V NM T
Sbjct: 359 LQVAWDE--PDLLQNVKRVSPWLVELVSNMPT 388
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 445 (161.7 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 99/219 (45%), Positives = 129/219 (58%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG G L +LW ACAG +V +P +V+YFPQGH E A + + +P
Sbjct: 9 KGGTEKG-LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDCVDFGN----LPIP 61
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHP----E-TDQTEPRSPDQCLPEPPKQTVHSFC 129
+LCRV+ I+ +A+ E+DEV+A++ L P E D D E + SF
Sbjct: 62 PMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFA 121
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
RHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+RR
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRR 220
Score = 186 (70.5 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 51/130 (39%), Positives = 67/130 (51%)
Query: 250 VLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
V+ A A+ +VYY PR TS+F + A+ + GMRFKM FE EDS
Sbjct: 276 VIEAATLAISGRPFEVVYY-PRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSR 334
Query: 308 RR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF--VASAPL 362
F GT+ V V D +WP S WR L++ WDEP +Q +RV+PW +E V PL
Sbjct: 335 ISWFMGTVSAVNVSD-PIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPL 393
Query: 363 NLAQPAVKKI 372
P KK+
Sbjct: 394 TSFSPPRKKM 403
Score = 97 (39.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 635
KV M+ VGR +DL+ L Y++L +L MF I+ + +V++ D G + AG+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAGN 644
Query: 636 DQWPEFCKMVKKIFIYSTEE 655
+ + EF K +++ I TE+
Sbjct: 645 EPFSEFLKTARRLTIL-TEQ 663
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAG 33
G + +GG G+G Y W G
Sbjct: 217 GIRRAKRGGIGNGPEYSAGWNPIGG 241
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 117/205 (57%), Positives = 142/205 (69%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST +EL +P DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE Y +ITL P+T Q + ++ P V+SF K+LTASDTS G
Sbjct: 84 AIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRP---IVNSFTKVLTASDTSAQGE 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV KHA ECLPPLDM+ P QEL A DLHG +WRFKH +R PR TTGW+ F T
Sbjct: 141 FSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTT 197
Query: 203 SKRLVAGDAFVFLRGENGELRVGVR 227
SK+LV GD VF RGE GELRVG+R
Sbjct: 198 SKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 411 (149.7 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 100/225 (44%), Positives = 131/225 (58%)
Query: 20 SGDL-YRE----LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-L 73
+GD+ +RE +W+ACAG V++P RVYYFPQGH+E H PL L
Sbjct: 8 AGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE-----------HCCPLLSTL 56
Query: 74 PSK---ILCRVVHIELLAEQETDEVYAQITLHPETDQT-EPRSP------DQCLPEPPKQ 123
PS + C + I+LLA+ TDEV+A + L P T Q P + D + + K
Sbjct: 57 PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKV 116
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
T +F KILT SD + GGFSV R A P L+ + P Q+L D+HG W F+HI
Sbjct: 117 T--TFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHI 174
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVRR
Sbjct: 175 YRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRR 219
Score = 152 (58.6 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 265 IVYYKPRT-SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE 322
+V+Y S+F++ ++ ++ G R KM E EDS F G + +
Sbjct: 286 VVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETG 345
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKKI 372
W GS W+ L+I WDEP +Q +RV+PW++E + L+ P K++
Sbjct: 346 PWRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRL 395
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 149 (57.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-----LRPRDKWAVVFTDDEGDM 630
KV+M+G+A+GR +DL+ L Y +L D L MF Q R R +AV + D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 631 MLAGDDQWPEFCKMVKKIFI 650
M GD W F K VK++ I
Sbjct: 162 MQVGDVPWEAFAKSVKRLKI 181
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 145 (56.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 44/156 (28%), Positives = 68/156 (43%)
Query: 508 SNTAAPLGRKVVD---PTTGTSGVKGSARAASDFDASQN---QDLKEVKRGMADVSRKET 561
SN+ + VD P+ S V S + Q QD +K + D +
Sbjct: 4 SNSCSSFSSSSVDSTKPSPSESSVNLSLSLTFPSTSPQREARQDWPPIKSRLRDTLKGRR 63
Query: 562 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE---IQGQLRPRDK 618
++G T KV M+G+ +GR +DL GY+ L + L MF+ I G R R
Sbjct: 64 LLRRGD--DTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKH 120
Query: 619 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 654
+ + D +GD M+ GD W F + V+++ I E
Sbjct: 121 HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 156
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 142 (55.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 559 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK 618
KE K+ S K+ M+G+ +GR V+L+A Y L ++++F + +
Sbjct: 67 KEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 126
Query: 619 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 660
+ +V+ D EGD +L GD W F VK++ + T +++
Sbjct: 127 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 527 GVKGSARAASDFDASQNQDLKEVKRGMAD---VSRKETQNKQGSAASTRTRTKVQMQGIA 583
G+ + + ++ N + V G A+ + +E QN+ S S KV M+G+
Sbjct: 38 GLSFGSSSGQYYNGGDNHEYDGV--GAAEEMMIMEEEEQNECNSVGSFYV--KVNMEGVP 93
Query: 584 VGRAVDLTALKGYDDLFDELEKMFEI------QGQLRPRDKWAVVFTDDEGDMMLAGDDQ 637
+GR +DL +L GY DL L+ MF + + + + D EGD M+ GD
Sbjct: 94 IGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKEGDWMMVGDVP 153
Query: 638 WPEFCKMVKKIFI 650
W F V+++ I
Sbjct: 154 WEMFLSSVRRLKI 166
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 138 (53.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 523 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTR---TKVQM 579
+G G A +D A+++Q + G V +N A++T+ KV M
Sbjct: 49 SGVVSSGGDAEKVNDSPAAKSQVV-----GWPPVCSYRKKNSCKEASTTKVGLGYVKVSM 103
Query: 580 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLRPRD--KWAVVFTDDEGDMMLAG 634
G+ R +DL + +GYDDL L+K+F +G L+ D ++ ++ D +GD MLAG
Sbjct: 104 DGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAG 163
Query: 635 DDQWPEFCKMVKKIFI 650
D W F + K++ I
Sbjct: 164 DVPWGMFLESCKRLRI 179
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 113 PDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKD 172
P +P P K+ H F K++T SD + ++HA P LD + L +D
Sbjct: 43 PMMMIPPPEKE--HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQD 99
Query: 173 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGE 221
+G WRF++ + + +++T GWS FV K+L AGD F RG E
Sbjct: 100 RNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDE 148
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 129 (50.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 33/108 (30%), Positives = 47/108 (43%)
Query: 558 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPR 616
+ Q K+ + KV M G R +DLT K Y +L LE MF+ G+ R
Sbjct: 74 KNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFER 133
Query: 617 DKW-----AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 659
+ + + D +GD ML GD W F K++ I EVK +
Sbjct: 134 EGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 103 PETDQTEP--RSPDQCLPEPPKQTVHSFCKILTAS 135
P T++T +S + LPE ++ + S K TAS
Sbjct: 23 PGTEETVSCGKSNKRVLPEATEKEIESTGKTETAS 57
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 99 ITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLD 158
+T + ++ +P + ++ E + H F K++T SD + ++HA E PLD
Sbjct: 7 LTRDEDEEEAKPLAEEEGAREVADRE-HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLD 64
Query: 159 MTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-- 216
+ L +DL G WRF++ + + +++T GWS FV K+L AGD F R
Sbjct: 65 SSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCV 124
Query: 217 GENG 220
G++G
Sbjct: 125 GDSG 128
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 127 (49.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 559 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI------QGQ 612
+E +N+ S S KV M+G+ +GR +DL +L GY DL L+ MF +
Sbjct: 73 EEEENECNSVGSFYV--KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEED 130
Query: 613 LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 650
+ + + D EGD M+ GD W F V+++ I
Sbjct: 131 MCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/161 (30%), Positives = 73/161 (45%)
Query: 513 PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRG-MADVSRKETQNKQGSAAST 571
P+G ++ +K +ARA + D + K VK + DVS K QG
Sbjct: 75 PIGLHRMNSLVNNQAMK-AARA-EEGDGEK----KVVKNDELKDVSMKVNPKVQGLGF-- 126
Query: 572 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-EIQG-----QLRP------RDKW 619
KV M G+ +GR VD+ A Y++L LE+MF + G +++P +
Sbjct: 127 ---VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDF 183
Query: 620 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 660
+ + D EGD ML GD W F VK++ I T E +A
Sbjct: 184 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 133 (51.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 541 SQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLF 600
S ++ + K+ + D K+ K KV M G+A+GR VDL A Y++L
Sbjct: 99 SAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGF-IKVNMDGVAIGRKVDLNAHSSYENLA 157
Query: 601 DELEKMF------------EIQGQLRPRD---KWAVVFTDDEGDMMLAGDDQWPEFCKMV 645
LE MF + LR D ++ + + D EGD ML GD W F V
Sbjct: 158 QTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSV 217
Query: 646 KKIFIYSTEEVKNMATSSK 664
K++ + T E +A ++
Sbjct: 218 KRLRVMKTSEANGLAARNQ 236
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 385 GSTQSHDITQVVGATEGQSSESQVVR--PMRQKEIDSTIINNSNDCSSR 431
GS ++ D G++ +SS SQVV P+ ++S ++NN S+R
Sbjct: 55 GSKRAADSASHAGSSPPRSS-SQVVGWPPIGSHRMNS-LVNNQATKSAR 101
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 598 DLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 657
D +E I G L ++ + + D+EGD ML GD W F VK++ + T E+
Sbjct: 193 DFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEIS 252
Query: 658 NMAT 661
+ T
Sbjct: 253 SALT 256
Score = 84 (34.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 531 SARAASDFDASQNQDLKEVKRGMADVSRKETQNK-QGSAASTRTRTKVQMQGIAVGRAVD 589
S++ +D S LK K D + K T+ K QG K+ M G+ +GR VD
Sbjct: 115 SSKLGNDSTTSNGVTLKNQK---CDAAAKTTEPKRQGGMF-----VKINMYGVPIGRKVD 166
Query: 590 LTALKGYDDLFDELEKMF 607
L+A Y+ L ++K+F
Sbjct: 167 LSAHNSYEQLSFTVDKLF 184
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 139 (54.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD + ++HA P D T L +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTV---LDFQDKNGKMWRFRYSYW 90
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV K+L AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 499 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGV 528
LFG+D++ +S++ G V + +S V
Sbjct: 263 LFGVDVEESSSSGDTRGEMGVAGYSSSSPV 292
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ--GQLRPRDKW--AVVFTDDEGDMM 631
KV M G R VD+ A Y +L + L MF G + +W AVV+ D +GD M
Sbjct: 49 KVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDWM 108
Query: 632 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 663
L GD W F K++ + E + +++++
Sbjct: 109 LVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 123 (48.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 55/173 (31%), Positives = 70/173 (40%)
Query: 490 KSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEV 549
KSEAS G + + A+P + V G V GS R S F +S +
Sbjct: 36 KSEASGTACCGGAGARDVEDGASPASKVQV---VGWPPV-GSYRR-STFQSSSSSTAAAA 90
Query: 550 KR---GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 606
K G D RK NK G KV M G R VDL GY +L D L+ +
Sbjct: 91 KGKGGGETDQGRK---NKGGGLY-----VKVSMDGAPYLRKVDLRMYGGYRELRDALDAL 142
Query: 607 FEI--QGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 657
F +AV + D +GD+MLAGD W F KK+ I E +
Sbjct: 143 FGCFSADASASAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEAR 195
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE---LAAKDLHGYEWRFKH 182
H F K++T SD + ++HA P LD + + + L +D G WRF++
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 216
+ + +++T GWS FV K+L AGD F R
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 47/158 (29%), Positives = 68/158 (43%)
Query: 505 KHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNK 564
+H+ +TAAP +VV G V+ R A+ K+G D K+ Q +
Sbjct: 76 EHDDDTAAPAKAQVV----GWPPVRAYRRNTFHQAAAA---AAATKKG-GD--EKQKQQQ 125
Query: 565 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRD-----KW 619
QG KV M G R VDL KGY +L + L+ +F D ++
Sbjct: 126 QGGGLYV----KVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQF 181
Query: 620 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 657
A+ + D +GD+ML GD W F KK+ I E +
Sbjct: 182 AIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEAR 219
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 118 (46.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF---EIQGQLR-PRDKWA------VVFTD 625
KV+ +G A+GR VDL YD+L L +MF + QG+ + D V + D
Sbjct: 96 KVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYED 155
Query: 626 DEGDMMLAGDDQWPEFCKMVKKIFI 650
+GD ML GD W +F + VK++ I
Sbjct: 156 GDGDWMLVGDVPWDDFARSVKRLKI 180
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGE 218
RR GW +++R G +V ++ E
Sbjct: 71 RRKKTVVGWPPVSSARRACGGANYVKVKKE 100
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE---LAAKDLHGYEWRFKHIF 184
F K LT SD + ++HA P L A ++ L +D G WRF++ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRR 228
+ ++LT GWS +V K L AGD +F R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
F K +T SD + + HA + P ++ L +D++G WRF++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVG 225
+ ++LT GWS FV K L AGD F R G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRD-----KWAVVFTDDEGD 629
KV M G R +DL GY +L LE MF++ G+ R+ ++A + D +GD
Sbjct: 96 KVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGD 155
Query: 630 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 659
ML GD W F K++ I E K +
Sbjct: 156 WMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 576 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKW-----AVVFTDDEGD 629
KV M G R +DL+ KGY +L LE MF+ G+ RD + + D +GD
Sbjct: 96 KVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGD 155
Query: 630 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 659
ML GD W F K++ I E K +
Sbjct: 156 WMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 89 (36.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 598 DLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 657
D+ D + I G L + ++ + + D+EGD ML GD W F VK++ + + E+
Sbjct: 195 DISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEIS 254
Query: 658 NMAT 661
+ T
Sbjct: 255 SALT 258
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 507 NSNTAAP-LGRK--VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQN 563
N T+ P + +K P G V+ + + +S+ + E G +++ +
Sbjct: 86 NKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGN--ESSHG-GQINKSDDGE 142
Query: 564 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF 607
KQ K+ M G+ +GR VDL A Y+ L ++K+F
Sbjct: 143 KQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLF 186
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 91 (37.1 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 252 ATAAHAVKTSTLFIVYYK-PRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
AT H K+ + I Y+ P F+I Y EA + RF+ + + +
Sbjct: 1033 ATGKHTDKSFS--IKYHDMPDVIDFLILRQFYDEARQRNWQASDRFRSIID-----DAWW 1085
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
GT++G + Q+P S ++ ++WD E++SPW++EP
Sbjct: 1086 FGTVLGQEPYQPQYPDSHFQCYSVKWDNGEV----EKLSPWDMEP 1126
Score = 86 (35.3 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 35/109 (32%), Positives = 47/109 (43%)
Query: 487 RGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV-----VDPTTGTSGVKGSARA----ASD 537
R K+S A L DLK S +AA GRK+ V T G GS++A +SD
Sbjct: 2136 RNKRSRAPLKRLKLSNDLKETSESAA--GRKIEEKSSVSENVETPGTAGSSKANLNCSSD 2193
Query: 538 FDASQNQ----DLKEVKRGMADVSRKETQN--KQGSAASTRTRTKVQMQ 580
D+ + D E K+ D+ RKE N K R R K + +
Sbjct: 2194 SDSGTDNSIYSDATETKKRKTDIVRKEISNLPKTSRRPQRRKRRKPKQE 2242
Score = 64 (27.6 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 38 VPRNGERVYYFPQGH---IEQLEASTNQELT-HQEP 69
VP+ G+ V YF QGH IE + + EL H+EP
Sbjct: 961 VPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPHKEP 996
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 386 STQSHDITQVVGATEGQSSESQVVRPMRQK 415
ST S + V +E +SS+S+ M+QK
Sbjct: 1728 STSSAVRRKFVSESENESSDSETDTQMKQK 1757
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 105 TDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLA-- 162
TD +E + L + K+++ F K LT SD + ++HA + P L+ L
Sbjct: 25 TDTSETTTTATWLHDDLKESL--FEKSLTPSDVGKLNRLVIPKQHAEKYFP-LNAVLVSS 81
Query: 163 ----TPTQE----LAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVF 214
T + E L+ +D G WRF++ + + ++LT GWS FV K+L GD F
Sbjct: 82 AAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFF 141
Query: 215 LR--GENGELRVGVRR 228
R ++ L +G RR
Sbjct: 142 QRHRSDSRRLFIGWRR 157
>TAIR|locus:2116505 [details] [associations]
symbol:IAA29 "indole-3-acetic acid inducible 29"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0010114 "response to red
light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010114 EMBL:AL021811
EMBL:AL161580 HOGENOM:HOG000238261 EMBL:AF380646 EMBL:AY054137
IPI:IPI00531341 PIR:T05400 RefSeq:NP_567891.1 UniGene:At.19102
IntAct:Q93WC4 STRING:Q93WC4 EnsemblPlants:AT4G32280.1 GeneID:829361
KEGG:ath:AT4G32280 GeneFarm:3189 TAIR:At4g32280 eggNOG:NOG320017
InParanoid:Q93WC4 PhylomeDB:Q93WC4 Genevestigator:Q93WC4
GermOnline:AT4G32280 Uniprot:Q93WC4
Length = 251
Score = 119 (46.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 563 NKQGSAASTRTR--TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-EIQGQLRPRDKW 619
+ S+ S+R+ KV+M G+A+ R VD+ Y+ L + L MF E + R +
Sbjct: 148 SSSSSSISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNY 207
Query: 620 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 650
F EGD +L GD W F + V +I I
Sbjct: 208 TFTFQGKEGDWLLRGDVTWKIFAESVHRISI 238
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 506 HNSNTAAPLGRKVVDPTTGTSGVKGSARAAS 536
H + + +PTT T G S+ +S
Sbjct: 126 HRGRRITAMNNNISNPTTATVGSSSSSSISS 156
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDM---TLATPTQELAAKDLHGYEWRFKHIF 184
F K +T SD V+ KH E PL + ++ L +D++G WRF++ +
Sbjct: 183 FEKTVTPSDVGKLNRL-VIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGEN 219
+ ++LT GWS FV KRL AGD F R +
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSND 276
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLP-PLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
F K +T SD + ++HA + P P T + +D++G WRF++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 216
+ ++LT GWS FV K L AGD F R
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 567 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE-IQGQLRPRD--KWAVVF 623
+AA+ + KV M G R +DL KGY +L + LE MF G + ++A+ +
Sbjct: 123 AAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITY 182
Query: 624 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 661
D +GD+ML GD + F KK+ I E + +
Sbjct: 183 QDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGS 220
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 557 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-------EI 609
S+++ + KQG KV M G R VDL K Y DL LEKMF +
Sbjct: 139 SKEDAEAKQGQGF---LYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG 195
Query: 610 QGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 660
+ R ++ + + D +GD ML GD W F +++ I + +A
Sbjct: 196 LSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLA 246
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 91 (37.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 43/172 (25%), Positives = 70/172 (40%)
Query: 440 SSPHLNVSLNLFPDSTDDHRIVAAQSVLSGYASSGRPG--NTVIHEEVERGKKSEASLGC 497
S+ L+ NL D + + L S GR G + ++ + S +SL
Sbjct: 9 SASALSNDENLVVSCEDSSSPIGNELELGLTLSLGRKGYRDCRVYADDSSSSSSSSSLSR 68
Query: 498 WLFGIDLKHNSNTAAPLGRKVVD-PTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 556
+K +++ A +VV P T + A AS +D ++
Sbjct: 69 ASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAK---ASATEDPN------LEI 119
Query: 557 SRKETQNKQGSAASTRTR-TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF 607
S+ +N+ S + KV M GI +GR +DL A K Y+ L + LE+MF
Sbjct: 120 SQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF 171
Score = 70 (29.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 621 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEE 655
+ + D EGD ML GD W F V+++ I T E
Sbjct: 203 LTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 687 673 0.0010 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 627 (67 KB)
Total size of DFA: 374 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.79u 0.12s 59.91t Elapsed: 00:00:02
Total cpu time: 59.80u 0.12s 59.92t Elapsed: 00:00:02
Start: Tue May 21 15:58:31 2013 End: Tue May 21 15:58:33 2013