Query 005625
Match_columns 687
No_of_seqs 327 out of 1955
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 02:49:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 100.0 2E-162 6E-167 1425.5 53.9 681 3-686 5-686 (816)
2 2r60_A Glycosyl transferase, g 100.0 3.7E-32 1.3E-36 299.3 30.4 360 277-686 6-380 (499)
3 3c48_A Predicted glycosyltrans 100.0 3.3E-29 1.1E-33 269.3 26.3 325 278-686 20-347 (438)
4 3fro_A GLGA glycogen synthase; 100.0 4.8E-29 1.6E-33 265.7 25.6 321 279-686 3-352 (439)
5 3vue_A GBSS-I, granule-bound s 100.0 3E-27 1E-31 266.9 29.6 235 406-686 152-423 (536)
6 1rzu_A Glycogen synthase 1; gl 99.9 3.9E-26 1.4E-30 249.7 21.2 338 279-686 1-387 (485)
7 2qzs_A Glycogen synthase; glyc 99.9 1.2E-25 4E-30 245.9 24.4 339 279-686 1-388 (485)
8 2jjm_A Glycosyl transferase, g 99.9 8.2E-25 2.8E-29 232.6 22.5 280 298-686 23-306 (394)
9 3okp_A GDP-mannose-dependent a 99.9 9E-25 3.1E-29 229.8 21.0 289 278-686 4-301 (394)
10 2iw1_A Lipopolysaccharide core 99.9 1.1E-25 3.7E-30 235.6 10.5 288 279-686 1-292 (374)
11 2gek_A Phosphatidylinositol ma 99.9 3.4E-24 1.2E-28 226.7 15.7 285 276-686 18-305 (406)
12 2x6q_A Trehalose-synthase TRET 99.9 1.1E-23 3.6E-28 225.6 15.8 289 279-686 41-337 (416)
13 2iuy_A Avigt4, glycosyltransfe 99.9 8.5E-23 2.9E-27 213.0 19.8 245 279-686 4-263 (342)
14 3oy2_A Glycosyltransferase B73 99.9 5E-23 1.7E-27 219.8 17.9 281 279-686 1-295 (413)
15 1f0k_A MURG, UDP-N-acetylgluco 99.8 8.3E-19 2.8E-23 183.7 20.1 265 278-686 6-272 (364)
16 2x0d_A WSAF; GT4 family, trans 99.8 3.8E-19 1.3E-23 194.2 13.7 277 276-686 44-336 (413)
17 3nb0_A Glycogen [starch] synth 99.8 2.1E-18 7.3E-23 197.7 20.3 245 406-686 180-540 (725)
18 2hy7_A Glucuronosyltransferase 99.8 2E-19 6.7E-24 195.2 9.5 180 407-685 124-305 (406)
19 1uqt_A Alpha, alpha-trehalose- 99.7 1.3E-17 4.3E-22 186.4 11.5 238 406-686 122-373 (482)
20 2vsy_A XCC0866; transferase, g 99.7 3.1E-17 1.1E-21 183.0 14.6 100 570-686 374-474 (568)
21 3beo_A UDP-N-acetylglucosamine 99.7 1.4E-16 4.9E-21 167.1 12.9 203 406-686 94-299 (375)
22 1vgv_A UDP-N-acetylglucosamine 99.7 1.2E-15 4.3E-20 160.7 16.4 210 406-686 85-299 (384)
23 3t5t_A Putative glycosyltransf 99.6 4.8E-15 1.6E-19 165.9 13.8 231 407-685 149-392 (496)
24 1v4v_A UDP-N-acetylglucosamine 99.6 1E-14 3.4E-19 153.9 11.9 200 406-686 90-291 (376)
25 2bfw_A GLGA glycogen synthase; 99.5 1E-13 3.5E-18 133.3 9.9 127 524-686 2-137 (200)
26 2xci_A KDO-transferase, 3-deox 99.4 3.4E-12 1.2E-16 137.1 16.6 94 573-686 197-300 (374)
27 3qhp_A Type 1 capsular polysac 99.3 3.4E-12 1.2E-16 119.2 8.1 94 572-686 2-96 (166)
28 2f9f_A First mannosyl transfer 99.2 1.3E-11 4.4E-16 117.9 8.0 98 568-686 19-119 (177)
29 3otg_A CALG1; calicheamicin, T 99.0 2.9E-09 9.9E-14 113.3 14.8 85 570-685 240-325 (412)
30 3s2u_A UDP-N-acetylglucosamine 99.0 3.3E-08 1.1E-12 105.7 22.6 267 277-685 1-269 (365)
31 3dzc_A UDP-N-acetylglucosamine 99.0 2.9E-09 9.9E-14 115.3 14.0 218 395-686 102-324 (396)
32 3ot5_A UDP-N-acetylglucosamine 98.7 3.9E-08 1.3E-12 106.9 10.7 207 395-686 105-318 (403)
33 4fzr_A SSFS6; structural genom 98.7 6.1E-08 2.1E-12 103.2 10.9 82 571-686 227-318 (398)
34 2iyf_A OLED, oleandomycin glyc 98.6 5.4E-07 1.8E-11 96.7 17.1 122 279-440 8-135 (430)
35 3oti_A CALG3; calicheamicin, T 98.6 1.1E-07 3.9E-12 101.3 11.6 120 277-440 19-161 (398)
36 3ia7_A CALG4; glycosysltransfe 98.6 6.1E-07 2.1E-11 94.6 16.8 125 279-441 5-135 (402)
37 2c4m_A Glycogen phosphorylase; 98.6 5.8E-07 2E-11 105.0 15.6 249 407-684 289-636 (796)
38 3tsa_A SPNG, NDP-rhamnosyltran 98.6 4.6E-08 1.6E-12 103.6 5.8 85 572-686 219-304 (391)
39 3rsc_A CALG2; TDP, enediyne, s 98.5 3.6E-06 1.2E-10 89.7 18.6 137 261-441 8-151 (415)
40 1l5w_A Maltodextrin phosphoryl 98.4 1.1E-06 3.7E-11 102.7 13.7 112 564-684 518-646 (796)
41 2p6p_A Glycosyl transferase; X 98.4 3.8E-06 1.3E-10 88.7 15.1 80 572-686 211-297 (384)
42 2gj4_A Glycogen phosphorylase, 98.4 1.6E-06 5.5E-11 101.6 12.6 111 564-684 542-670 (824)
43 3h4t_A Glycosyltransferase GTF 98.2 2.2E-05 7.6E-10 84.4 15.6 126 279-441 1-127 (404)
44 4hwg_A UDP-N-acetylglucosamine 98.1 8.4E-06 2.9E-10 88.2 10.3 199 406-686 93-299 (385)
45 3rhz_A GTF3, nucleotide sugar 97.9 6.6E-05 2.3E-09 80.1 12.4 155 406-661 73-233 (339)
46 3q3e_A HMW1C-like glycosyltran 95.9 0.0059 2E-07 70.1 5.5 98 572-686 441-539 (631)
47 1rrv_A Glycosyltransferase GTF 95.5 0.039 1.3E-06 58.8 9.6 123 279-440 1-128 (416)
48 2yjn_A ERYCIII, glycosyltransf 95.2 0.052 1.8E-06 58.4 9.5 82 570-685 265-352 (441)
49 2iya_A OLEI, oleandomycin glyc 95.2 0.095 3.3E-06 55.8 11.2 123 279-440 13-140 (424)
50 1iir_A Glycosyltransferase GTF 95.1 0.084 2.9E-06 56.3 10.7 122 279-439 1-126 (415)
51 4amg_A Snogd; transferase, pol 94.8 0.039 1.3E-06 57.8 6.7 33 406-440 127-159 (400)
52 2o6l_A UDP-glucuronosyltransfe 90.9 0.13 4.3E-06 47.8 3.2 79 572-685 22-103 (170)
53 2pq6_A UDP-glucuronosyl/UDP-gl 83.1 8.1 0.00028 42.2 12.4 124 279-437 9-146 (482)
54 2vch_A Hydroquinone glucosyltr 82.7 6.4 0.00022 43.2 11.3 122 279-436 7-137 (480)
55 2yjn_A ERYCIII, glycosyltransf 75.4 1.2 4E-05 47.8 2.4 33 406-440 143-175 (441)
56 2acv_A Triterpene UDP-glucosyl 73.8 18 0.00061 39.3 11.5 126 279-435 10-140 (463)
57 2c1x_A UDP-glucose flavonoid 3 69.3 29 0.00099 37.7 11.8 122 279-436 8-139 (456)
58 4gyw_A UDP-N-acetylglucosamine 59.3 9.9 0.00034 44.2 5.9 99 569-686 520-620 (723)
59 3hbm_A UDP-sugar hydrolase; PS 52.9 18 0.0006 37.2 6.0 84 573-686 159-242 (282)
60 1rrv_A Glycosyltransferase GTF 48.7 3.9 0.00013 43.2 0.2 79 572-685 238-319 (416)
61 3hbf_A Flavonoid 3-O-glucosylt 43.5 1.5E+02 0.0052 32.2 11.9 123 279-435 14-143 (454)
62 1iir_A Glycosyltransferase GTF 37.5 8.6 0.00029 40.6 0.7 79 572-685 239-318 (415)
63 4b4o_A Epimerase family protei 35.7 23 0.00078 35.3 3.5 33 279-340 1-33 (298)
64 3ius_A Uncharacterized conserv 32.4 21 0.00072 35.1 2.6 35 276-340 3-37 (286)
65 1uan_A Hypothetical protein TT 29.8 1.4E+02 0.0048 29.2 8.1 22 392-416 83-104 (227)
66 2jmk_A Hypothetical protein TA 28.1 27 0.00094 30.3 2.1 30 247-276 25-54 (111)
67 4gi5_A Quinone reductase; prot 28.1 78 0.0027 32.5 6.0 37 279-337 23-59 (280)
68 4egb_A DTDP-glucose 4,6-dehydr 27.2 2.7E+02 0.0091 27.8 9.9 11 425-435 135-146 (346)
69 3p0r_A Azoreductase; structura 25.3 82 0.0028 30.3 5.4 40 277-338 3-46 (211)
70 2phj_A 5'-nucleotidase SURE; S 24.1 3.9E+02 0.013 27.0 10.2 35 279-340 2-36 (251)
71 3bfv_A CAPA1, CAPB2, membrane 23.9 1E+02 0.0035 30.9 6.0 34 187-222 6-39 (271)
72 2iya_A OLEI, oleandomycin glyc 23.3 90 0.0031 32.5 5.6 81 572-685 256-338 (424)
73 2vzf_A NADH-dependent FMN redu 22.9 1E+02 0.0035 29.0 5.4 40 277-338 1-41 (197)
74 2q62_A ARSH; alpha/beta, flavo 22.8 1.2E+02 0.0041 30.3 6.2 52 261-337 19-71 (247)
75 1d4a_A DT-diaphorase, quinone 22.7 1.2E+02 0.004 30.5 6.1 39 278-338 2-40 (273)
76 3ih5_A Electron transfer flavo 22.6 2.8E+02 0.0097 27.0 8.8 35 406-440 90-125 (217)
77 3qay_A Endolysin; amidase A/B 22.5 1.4E+02 0.0048 28.3 6.3 54 279-340 2-56 (180)
78 2cp8_A NEXT to BRCA1 gene 1 pr 22.4 72 0.0025 25.0 3.4 20 219-238 2-21 (54)
79 2e6c_A 5'-nucleotidase SURE; S 20.7 4.1E+02 0.014 26.6 9.6 33 404-436 84-127 (244)
80 2fzv_A Putative arsenical resi 20.4 99 0.0034 31.7 5.0 53 259-337 43-95 (279)
81 2ixd_A LMBE-related protein; h 20.3 2.6E+02 0.0087 27.7 8.0 22 392-416 85-106 (242)
82 3ikm_A DNA polymerase subunit 20.2 72 0.0025 38.9 4.3 92 158-268 6-126 (1172)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1.6e-162 Score=1425.50 Aligned_cols=681 Identities=65% Similarity=1.090 Sum_probs=617.5
Q ss_pred CCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeec
Q 005625 3 APKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVL 82 (687)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 82 (687)
+++|+|++||+|+++++|++||++|++||++|+++||++|++|||+++|+++| +.+++++.+|+||++|++||||||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (816)
T 3s28_A 5 ERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALP--EQTRKKLEGGPFFDLLKSTQEAIVL 82 (816)
T ss_dssp ----------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTT--TSCGGGCCCSTHHHHHHTEEEEEEC
T ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHH--HhhhcccccCcHHHHHHhhhheeec
Confidence 37999999999999999999999999999999999999999999999999999 3466888999999999999999999
Q ss_pred CCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhhchhcccccCCCceeeeecccccCCCCCCCCCCCCCchhhhh
Q 005625 83 PPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFL 162 (687)
Q Consensus 83 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~d~~~f~~~~p~~~~~~~ig~g~~~l 162 (687)
|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++||+||+|||++||++++|+||||||+||
T Consensus 83 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (816)
T 3s28_A 83 PPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFL 162 (816)
T ss_dssp SSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHH
T ss_pred CCeEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCchhHHHHHHhcccCCeeeeccccCCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcccc
Q 005625 163 NRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGW 242 (687)
Q Consensus 163 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~g~~l~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~e~gw 242 (687)
|||||||||+|++++++||+||+.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (816)
T 3s28_A 163 NRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGW 242 (816)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCS
T ss_pred HHHHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcCCCcchHhHHhcCCCccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 005625 243 GDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLR 322 (687)
Q Consensus 243 g~~~~r~~e~~~~l~~~l~~p~~~~le~f~~r~p~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~ 322 (687)
||||+||+|||++|+|+||||||++||+||+|+||+|||+|+|+||||+|.+++|+||||||++||+||||||+++|..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~ 322 (816)
T 3s28_A 243 GDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQR 322 (816)
T ss_dssp CSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCeEEEEeccCCCCCCCccccccccccCCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHH
Q 005625 323 IKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITA 402 (687)
Q Consensus 323 l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~ 402 (687)
|+++||+++|+|+|+||.++++.|+.|+++.+.+.+++|++|+|+|+++.++++++|++++.+|+|+..|+.+++..+.+
T Consensus 323 L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~ 402 (816)
T 3s28_A 323 IKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSK 402 (816)
T ss_dssp HHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999899999999999998788899999999999999999888888777
Q ss_pred hcCCCceEEEeCCCChhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecC
Q 005625 403 ELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (687)
Q Consensus 403 ~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS 482 (687)
..+++|||||+|+|+++++|.++++++|+|+|+|+|+++..++..++.+|..+...|++++++++|+.+++.||+|||+|
T Consensus 403 ~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S 482 (816)
T 3s28_A 403 ELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST 482 (816)
T ss_dssp HCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESC
T ss_pred hcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECC
Confidence 66779999999999999999999999999999999999988888888899998888999999999999999999999999
Q ss_pred HHHHhccccccccccccccccccccceeecccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccc
Q 005625 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (687)
Q Consensus 483 ~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~ 562 (687)
.+++.+..+.+++|.++.+|++|++|++++||+++++|+.|||||||.+.|.|......|....+..++..++++.+..+
T Consensus 483 ~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~ 562 (816)
T 3s28_A 483 FQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKE 562 (816)
T ss_dssp HHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTT
T ss_pred HHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHH
Confidence 99988777778899999999999999999999999999999999999999999876665555566667777888877777
Q ss_pred cccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCc
Q 005625 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (687)
Q Consensus 563 ~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~ 642 (687)
..+.+.++++|+|+++||+++.||++.|++|++++...+++++|+|+|++.+ ..+.+.++.++.++++++++++++.++
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~ 641 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQ 641 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBB
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCc
Confidence 7777678889999999999999999999999999887667889999987654 567778888888999999999999999
Q ss_pred EEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 643 FRWIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 643 V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
|+|+|++.+.....++|++.++++|+||+||.+ |||++++||.+
T Consensus 642 V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA 686 (816)
T 3s28_A 642 FRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 686 (816)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHH
T ss_pred EEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHH
Confidence 999996444444566666655456999999999 99999999975
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=3.7e-32 Score=299.27 Aligned_cols=360 Identities=26% Similarity=0.433 Sum_probs=236.1
Q ss_pred ccceEEEEccCCCCCCCC--CCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccc
Q 005625 277 MVFNVVILSPHGYFGQAN--VLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (687)
Q Consensus 277 ~~~rIliiS~Hg~f~~~~--vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE 354 (687)
+.|||++++++.+..+.+ +.+.|.+||..+|+.+++++|.+ +|| +|.|+|........+.+...++
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~--------~G~----~V~v~~~~~~~~~~~~~~~~~~ 73 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAE--------MGV----QVDIITRRIKDENWPEFSGEID 73 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHH--------TTC----EEEEEEECCCBTTBGGGCCSEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHh--------cCC----eEEEEeCCCCcccccchhhhHH
Confidence 347999999987654433 35678899999999999999988 899 9999987532211012222233
Q ss_pred cccCCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEE
Q 005625 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (687)
Q Consensus 355 ~i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V 434 (687)
.+....+++++++|..... +..+..+|.++..|...+.+.+.+ ...+|||||+|++..++++.++++..++|+|
T Consensus 74 ~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v 147 (499)
T 2r60_A 74 YYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYRE-EGKFPQVVTTHYGDGGLAGVLLKNIKGLPFT 147 (499)
T ss_dssp ECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHH-HTCCCSEEEEEHHHHHHHHHHHHHHHCCCEE
T ss_pred hccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHh-cCCCCCEEEEcCCcchHHHHHHHHhcCCcEE
Confidence 3312358999999986542 233345666665555555555533 2358999999988788888889999999999
Q ss_pred EEecCCccccCC---CCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceee
Q 005625 435 TIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 511 (687)
Q Consensus 435 ~T~HaL~~~ky~---~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv 511 (687)
+|.|+....... ..+.....+...+++..+...++.+++.||.||++|...... +... .+|
T Consensus 148 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~------~~~--- 211 (499)
T 2r60_A 148 FTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG-------QYSH------DLY--- 211 (499)
T ss_dssp EECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHH-------TTTS------GGG---
T ss_pred EEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHH-------HHhh------hcc---
Confidence 999997432110 001100111111222233345778899999999999765431 1110 001
Q ss_pred cccc-c----CCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCC
Q 005625 512 HGID-V----FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKN 586 (687)
Q Consensus 512 ~gi~-v----~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kn 586 (687)
+ + ...|+.|||||||.+.|.|....+.+ ..++.++...+ ...++++++|+++||+.+.||
T Consensus 212 ---g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~-~~~r~~~~~~~-----------~~~~~~~~~i~~vGrl~~~Kg 276 (499)
T 2r60_A 212 ---RGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIK-AKITKYLERDL-----------GSERMELPAIIASSRLDQKKN 276 (499)
T ss_dssp ---TTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHH-HHHHHHHHHHS-----------CGGGTTSCEEEECSCCCGGGC
T ss_pred ---cccccccCCCCeEEECCCcChhhcCccchhhhH-HHHHHHhcccc-----------cccCCCCcEEEEeecCccccC
Confidence 1 1 12489999999999998876432221 11112111000 002456789999999999999
Q ss_pred HHHHHHHHhhccccCCC-ceEEEEEccCCCCCC---CChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHh
Q 005625 587 MTGLVECYGKNSQLREL-VNLVVVAGYIDVNKS---KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (687)
Q Consensus 587 i~~LVeAfa~l~~l~~~-~nLVLVGG~~d~~~s---~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~a 662 (687)
++.|++|++.+....++ ..++|+|+..++..+ .++++.++.++++++++++|+.++|+|+|+ ++++++.++|+.+
T Consensus 277 ~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~-v~~~~~~~~~~~a 355 (499)
T 2r60_A 277 HYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL-NSQQELAGCYAYL 355 (499)
T ss_dssp HHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEEC-CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCC-CCHHHHHHHHHhc
Confidence 99999999987654333 357776652111011 113343446788899999999999999995 8999999999964
Q ss_pred hcCCcEEEEcCCC-CCchhhhcccC
Q 005625 663 ADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 663 ad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
..+.|+||+||.+ |||++++||.+
T Consensus 356 ~~~~dv~v~pS~~Eg~~~~~lEAma 380 (499)
T 2r60_A 356 ASKGSVFALTSFYEPFGLAPVEAMA 380 (499)
T ss_dssp HHTTCEEEECCSCBCCCSHHHHHHH
T ss_pred CcCCCEEEECcccCCCCcHHHHHHH
Confidence 3233899999999 99999999975
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.97 E-value=3.3e-29 Score=269.27 Aligned_cols=325 Identities=20% Similarity=0.228 Sum_probs=213.4
Q ss_pred cceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccccccc
Q 005625 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (687)
Q Consensus 278 ~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~ 357 (687)
+|||++++.+.+. ....|.+..||..+++.+++++|.+ +|| +|.|+|...... ....+...
T Consensus 20 mmkIl~i~~~~~p--~~~~~~~~~GG~~~~~~~la~~L~~--------~G~----~V~v~~~~~~~~-----~~~~~~~~ 80 (438)
T 3c48_A 20 HMRVAMISMHTSP--LQQPGTGDSGGMNVYILSTATELAK--------QGI----EVDIYTRATRPS-----QGEIVRVA 80 (438)
T ss_dssp CCEEEEECTTSCT--TCC-------CHHHHHHHHHHHHHH--------TTC----EEEEEEECCCGG-----GCSEEEEE
T ss_pred hheeeeEEeeccc--cccCCCCCCCCHHHHHHHHHHHHHh--------cCC----EEEEEecCCCCC-----Cccccccc
Confidence 3699999987421 1223445789999999999999988 899 999998742111 01111222
Q ss_pred CCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEEEEe
Q 005625 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (687)
Q Consensus 358 ~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~ 437 (687)
+++.++++|..+.. ..++..++.++..|...+.+..++. ..+||+||+|++..++++.++++..++|+|+|.
T Consensus 81 --~~v~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~ 152 (438)
T 3c48_A 81 --ENLRVINIAAGPYE-----GLSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTA 152 (438)
T ss_dssp --TTEEEEEECCSCSS-----SCCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred --CCeEEEEecCCCcc-----ccchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEe
Confidence 48899999876542 1222344555555655555542232 224999999998888888888999999999999
Q ss_pred cCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeecccccC
Q 005625 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (687)
Q Consensus 438 HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~ 517 (687)
|+....+....... . ......+...+...++.||.||++|..... .+.. .+ ++.
T Consensus 153 h~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~-------~~~~--------~~------g~~ 206 (438)
T 3c48_A 153 HTLAAVKNSYRDDS----D-TPESEARRICEQQLVDNADVLAVNTQEEMQ-------DLMH--------HY------DAD 206 (438)
T ss_dssp SSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHH-------HHHH--------HH------CCC
T ss_pred cCCccccccccccc----C-CcchHHHHHHHHHHHhcCCEEEEcCHHHHH-------HHHH--------Hh------CCC
Confidence 99753322110000 0 000001122467788999999999876543 1211 01 112
Q ss_pred CCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhc
Q 005625 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (687)
Q Consensus 518 ~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l 597 (687)
..|+.|||||+|.+.|.+...... ..+++ .+..++++++|+++||+.+.||++.|++|+..+
T Consensus 207 ~~k~~vi~ngvd~~~~~~~~~~~~------~~~r~------------~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l 268 (438)
T 3c48_A 207 PDRISVVSPGADVELYSPGNDRAT------ERSRR------------ELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAAL 268 (438)
T ss_dssp GGGEEECCCCCCTTTSCCC----C------HHHHH------------HTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHH
T ss_pred hhheEEecCCccccccCCcccchh------hhhHH------------hcCCCCCCcEEEEEeeecccCCHHHHHHHHHHH
Confidence 248999999999998877543210 01111 122345778999999999999999999999988
Q ss_pred cccCC--CceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC
Q 005625 598 SQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH 675 (687)
Q Consensus 598 ~~l~~--~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~ 675 (687)
....+ +++|+|+|+..+ +++ ..++++++++++|+.++|.|+|+ ++.+++.++|+.+ |+||+||.+
T Consensus 269 ~~~~p~~~~~l~i~G~~~~-----~g~---~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~a----dv~v~ps~~ 335 (438)
T 3c48_A 269 FDRDPDRNLRVIICGGPSG-----PNA---TPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAA----DIVAVPSFN 335 (438)
T ss_dssp HHHCTTCSEEEEEECCBC--------------CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHC----SEEEECCSC
T ss_pred HhhCCCcceEEEEEeCCCC-----CCc---HHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhC----CEEEECccc
Confidence 76544 678888875211 112 23466788999999999999995 8889999999964 999999999
Q ss_pred -CCchhhhcccC
Q 005625 676 -PIPLNFLPSYK 686 (687)
Q Consensus 676 -gFGLviLEa~~ 686 (687)
|||++++||.+
T Consensus 336 e~~~~~~~Eama 347 (438)
T 3c48_A 336 ESFGLVAMEAQA 347 (438)
T ss_dssp CSSCHHHHHHHH
T ss_pred cCCchHHHHHHH
Confidence 99999999974
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.97 E-value=4.8e-29 Score=265.66 Aligned_cols=321 Identities=16% Similarity=0.133 Sum_probs=214.7
Q ss_pred ceEEEEccCCCCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCc------c--
Q 005625 279 FNVVILSPHGYFGQANVLGLP-DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT------C-- 349 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~P-dtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~------~-- 349 (687)
|||++++.+. .| ..||..+++.+++++|.+ +|| +|.|+|...+...... +
T Consensus 3 MkIl~v~~~~---------~p~~~gG~~~~~~~la~~L~~--------~G~----~V~v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 3 MKVLLLGFEF---------LPVKVGGLAEALTAISEALAS--------LGH----EVLVFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CEEEEECSCC---------TTSCSSSHHHHHHHHHHHHHH--------TTC----EEEEEEECTTCSCCEEEEEEEETTE
T ss_pred eEEEEEeccc---------CCcccCCHHHHHHHHHHHHHH--------CCC----eEEEEecCCCCchhhhhccccccCc
Confidence 5999999763 23 789999999999999988 899 9999996543321100 0
Q ss_pred --ccccccccCCCCeEEEEecCCCCccccccccccccchh-hHH-------HHHHHHHHHHHHh--cCCCceEEEeCCCC
Q 005625 350 --NQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP-YLE-------TFTEDVGSEITAE--LQGFPDFIIGNYSD 417 (687)
Q Consensus 350 --~q~lE~i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp-~Le-------~f~~~~~~~L~~~--~~~~PDLIH~Hys~ 417 (687)
..+... ....|+.++++|. .. ..+..+|+ +.. .|...+.+.+... ...+||+||+|++.
T Consensus 62 ~~~~~~~~-~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~ 132 (439)
T 3fro_A 62 EVQVKVSY-EERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWH 132 (439)
T ss_dssp EEEEEEEE-EEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGG
T ss_pred ccceeeee-ccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchh
Confidence 000000 0125899999987 21 11222332 211 1333333333332 15799999999999
Q ss_pred hhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhcccccccccc
Q 005625 418 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497 (687)
Q Consensus 418 aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qye 497 (687)
.++++.++++..++|+|+|.|+.....++........+.. .........++.+++.||.||++|...... .+.
T Consensus 133 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~------~~~ 205 (439)
T 3fro_A 133 TVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID------EWG 205 (439)
T ss_dssp GHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH------THH
T ss_pred hhhhHHHHhhccCCCEEEEecccccccCchHHhCcccccc-ccccceeeHhhhhhhhccEEEecCHHHHHH------Hhh
Confidence 9999999999999999999999864322110000000100 001111235778999999999999765431 111
Q ss_pred ccccccccccceeecccccCCCcceEeeCCCCCCCCCCCC----hHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCC
Q 005625 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS----EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (687)
Q Consensus 498 s~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~----~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kP 573 (687)
.+ +....|+.|||||+|.+.|.|.. ....+ ..+++. +..+++ +
T Consensus 206 ---------~~------~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~-----~~~~~~------------~~~~~~-~ 252 (439)
T 3fro_A 206 ---------FF------RNFEGKITYVFNGIDCSFWNESYLTGSRDERK-----KSLLSK------------FGMDEG-V 252 (439)
T ss_dssp ---------HH------GGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH-----HHHHHH------------HTCCSC-E
T ss_pred ---------hh------hhcCCceeecCCCCCchhcCcccccchhhhhH-----HHHHHH------------cCCCCC-c
Confidence 11 12245999999999999998752 11111 122221 122444 9
Q ss_pred EEEEEecCC-cCCCHHHHHHHHhhccccC--CCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCccc
Q 005625 574 IVFSMARLD-HVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (687)
Q Consensus 574 iIl~VGRLd-p~Kni~~LVeAfa~l~~l~--~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l 650 (687)
+|+++||+. +.||++.|++|++++.... ++++|+|+|++. . ...+.+++++++++ +.+.|+|+ +
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~-------~---~~~~~l~~~~~~~~--~~~~~~g~-~ 319 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD-------P---ELEGWARSLEEKHG--NVKVITEM-L 319 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC-------H---HHHHHHHHHHHHCT--TEEEECSC-C
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC-------h---hHHHHHHHHHhhcC--CEEEEcCC-C
Confidence 999999999 9999999999999887654 678899887542 1 12356778899998 88889995 8
Q ss_pred CcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 651 NRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 651 ~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
+++++.++|+.+ |+||+||.+ |||++++||.+
T Consensus 320 ~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 320 SREFVRELYGSV----DFVIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp CHHHHHHHHTTC----SEEEECBSCCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHC----CEEEeCCCCCCccHHHHHHHH
Confidence 999999999853 999999999 99999999975
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.96 E-value=3e-27 Score=266.90 Aligned_cols=235 Identities=15% Similarity=0.140 Sum_probs=155.3
Q ss_pred CCceEEEeCCCChhHHHHHHHHcC-------CCcEEEEecCCccccC------CCCchhhh---hhc--c---cccccch
Q 005625 406 GFPDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKY------PDSDIYWK---KFD--E---KYHFSCQ 464 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr~l-------gVP~V~T~HaL~~~ky------~~s~l~w~---~~~--~---~y~~s~r 464 (687)
+.+||+|+|+|.+++++.+++... ++|+|+|+|++..... ......+. ..+ . .......
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 457899999999999999887653 7999999998853211 00010000 000 0 0111223
Q ss_pred hHHHHHHHhcCCEEEecCH---HHHhccccccccccccccccccccceeecccccC-CCcceEeeCCCCCCCCCCCChHH
Q 005625 465 FTADLIAMNNADFIITSTY---QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMDIYFPYSEKQ 540 (687)
Q Consensus 465 f~aE~iam~~AD~IItsS~---qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~-~pK~~VIpnGVD~~~F~p~~~~~ 540 (687)
+..++.++..||.|+|+|. +|+.. .++ +.+. +. ... ..|+.+|+||||.+.|.|.++..
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~------~~~----~g~~-l~------~~~~~~~i~~I~NGiD~~~~~p~~d~~ 294 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELIS------GIA----RGCE-LD------NIMRLTGITGIVNGMDVSEWDPSKDKY 294 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHT------TCC----CCSS-SC------CCSCCCSCEECCCCCCTTTSCTTTCSS
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhc------ccc----cccc-cc------cccccCCeEEEECCcchhhcCCCCccc
Confidence 3456889999999999985 34431 121 1110 10 011 23899999999999998854210
Q ss_pred -----------HhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEE
Q 005625 541 -----------KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 609 (687)
Q Consensus 541 -----------~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLV 609 (687)
......+..+. +..+...+++.|+|+++|||+++||++.|++|++++.+ ++.+++|+
T Consensus 295 ~~~~~~~~~~~~~K~~~k~~l~----------~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~ 362 (536)
T 3vue_A 295 ITAKYDATTAIEAKALNKEALQ----------AEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLL 362 (536)
T ss_dssp SSCCCCTTTHHHHHHHHHHHHH----------HHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEE
T ss_pred cccccchhhhhhhhHHHHHHHH----------HhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEE
Confidence 00000111121 12345567889999999999999999999999998754 56789988
Q ss_pred EccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 610 AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 610 GG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
|.+. ++.. ..++.++..+ .++|.+.|. .+.+++..+|+.+ |+||+||++ |||++++||.+
T Consensus 363 G~G~-------~~~~---~~~~~~~~~~--~~~v~~~~~-~~~~~~~~~~~~a----D~~v~PS~~E~fgl~~lEAma 423 (536)
T 3vue_A 363 GTGK-------KKFE---KLLKSMEEKY--PGKVRAVVK-FNAPLAHLIMAGA----DVLAVPSRFEPCGLIQLQGMR 423 (536)
T ss_dssp CCBC-------HHHH---HHHHHHHHHS--TTTEEEECS-CCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHH
T ss_pred eccC-------chHH---HHHHHHHhhc--CCceEEEEe-ccHHHHHHHHHhh----heeecccccCCCCHHHHHHHH
Confidence 8541 2322 2344455544 578999994 7888888999854 999999999 99999999974
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.94 E-value=3.9e-26 Score=249.66 Aligned_cols=338 Identities=14% Similarity=0.105 Sum_probs=201.6
Q ss_pred ceEEEEccCCCCCCCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccc-----
Q 005625 279 FNVVILSPHGYFGQANVLGLP--DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ----- 351 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~P--dtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q----- 351 (687)
|||++++.+. .| ..||..+++.+++++|.+ +|| +|.|+|...+... ..+.+
T Consensus 1 MkIl~v~~~~---------~P~~~~GG~~~~~~~la~~L~~--------~G~----~V~vi~~~~~~~~-~~~~~~~~~~ 58 (485)
T 1rzu_A 1 MNVLSVSSEI---------YPLIKTGGLADVVGALPIALEA--------HGV----RTRTLIPGYPAVK-AAVTDPVKCF 58 (485)
T ss_dssp CEEEEECSCB---------TTTBCSSHHHHHHHHHHHHHHT--------TTC----EEEEEEECCHHHH-HHCCSCEEEE
T ss_pred CeEEEEeeee---------ccccccccHHHHHHHHHHHHHH--------cCC----eEEEEeccccccc-ccccccceeE
Confidence 6999999763 34 579999999999999887 899 9999986432100 00000
Q ss_pred --------ccccc-cCCCCeEEEEecCCCCcccccc--cccc--ccchhh----HHHHHHHHHHHHHHhc--CCCceEEE
Q 005625 352 --------RLERV-SGTEHTHILRVPFRSEKGILRQ--WISR--FDVWPY----LETFTEDVGSEITAEL--QGFPDFII 412 (687)
Q Consensus 352 --------~lE~i-~~~~~v~IlRvP~~~~~~~~~~--~isr--~~iwp~----Le~f~~~~~~~L~~~~--~~~PDLIH 412 (687)
..+.. ....|+.+++++.... +.+. .... ..-|+. +..|...+. .+.+.+ ..+|||||
T Consensus 59 ~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~DiIh 135 (485)
T 1rzu_A 59 EFTDLLGEKADLLEVQHERLDLLILDAPAY--YERSGGPYLGQTGKDYPDNWKRFAALSLAAA-RIGAGVLPGWRPDMVH 135 (485)
T ss_dssp EESCSSSCCEEEEEEEETTEEEEEEECHHH--HCSSSCSSBCTTSSBCTTHHHHHHHHHHHHH-HHHTTCSSSCCCSEEE
T ss_pred EEEEecCCeEEEEEEEecCceEEEEeChHH--hCCCccccCCcccccccchHHHHHHHHHHHH-HHHHHhccCCCCCEEE
Confidence 00000 0014788988875310 0000 0000 000110 111222222 222322 56899999
Q ss_pred eCCCChhHHHHHHHHc--CCCcEEEEecCCccccC-CCC-----chhhhhhcc-cccccchhHHHHHHHhcCCEEEecCH
Q 005625 413 GNYSDGNLVASLLAYK--MGITQCTIAHALEKTKY-PDS-----DIYWKKFDE-KYHFSCQFTADLIAMNNADFIITSTY 483 (687)
Q Consensus 413 ~Hys~aglvA~llAr~--lgVP~V~T~HaL~~~ky-~~s-----~l~w~~~~~-~y~~s~rf~aE~iam~~AD~IItsS~ 483 (687)
+|++.+++++.++++. .++|+|+|.|+...... ... ++.+..+.. ...+......++.+++.||.|||+|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 215 (485)
T 1rzu_A 136 AHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSP 215 (485)
T ss_dssp EEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCH
T ss_pred ecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCH
Confidence 9998777788888875 89999999999743210 000 000000000 00011112346788999999999997
Q ss_pred HHHhccccccccccc-cccccccccceeecccccCCCcceEeeCCCCCCCCCCCChHHH----------hhhhhhhhhhh
Q 005625 484 QEIAGTKNTVGQYES-HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQK----------RLTALHGSIEQ 552 (687)
Q Consensus 484 qEi~~~~~~v~qyes-~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~----------r~~~l~~~i~~ 552 (687)
..... +.. +-++.++.+. ++...|+.|||||||.+.|.|...... .....+..+++
T Consensus 216 ~~~~~-------~~~~~~g~~~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 1rzu_A 216 SYAEE-------ILTAEFGMGLEGVI------GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE 282 (485)
T ss_dssp HHHHH-------TTSHHHHTTCHHHH------HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH
T ss_pred hHHHH-------HhccccCcchHHHH------HhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHH
Confidence 65431 110 0000111111 012348999999999999887542100 00000011111
Q ss_pred hhcCCCcccccccCCCCCC-CCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHH
Q 005625 553 LLFDPEQNDEHVGTLSDRS-KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631 (687)
Q Consensus 553 ll~~~~~~~~~~g~l~~~~-kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~ 631 (687)
. +..+++ +++|+++||+.+.||++.|++|++.+.. ++++|+|+|++. .+ ..+.++
T Consensus 283 ~------------~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~-------~~---~~~~l~ 338 (485)
T 1rzu_A 283 H------------FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGD-------VA---LEGALL 338 (485)
T ss_dssp H------------HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBC-------HH---HHHHHH
T ss_pred h------------cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCc-------hH---HHHHHH
Confidence 1 112332 6799999999999999999999998764 478999998652 22 235667
Q ss_pred HHHHHcCCCCcEE-EcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 632 ELMKTYKLDGQFR-WIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 632 ~li~elgL~~~V~-flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
+++++++ ++|+ |+|+ +.+++.++|+.+ |+||+||.+ |||++++||.+
T Consensus 339 ~~~~~~~--~~v~~~~g~--~~~~~~~~~~~a----dv~v~pS~~E~~~~~~lEAma 387 (485)
T 1rzu_A 339 AAASRHH--GRVGVAIGY--NEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALR 387 (485)
T ss_dssp HHHHHTT--TTEEEEESC--CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHH
T ss_pred HHHHhCC--CcEEEecCC--CHHHHHHHHhcC----CEEEECcccCCCCHHHHHHHH
Confidence 8888885 7887 7895 667778999864 999999999 99999999974
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.94 E-value=1.2e-25 Score=245.92 Aligned_cols=339 Identities=15% Similarity=0.139 Sum_probs=200.9
Q ss_pred ceEEEEccCCCCCCCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccc-----
Q 005625 279 FNVVILSPHGYFGQANVLGLP--DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ----- 351 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~P--dtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q----- 351 (687)
|||++++.+. .| ..||..+++.+++++|.+ +|| +|.|+|...+... .....
T Consensus 1 MkIl~v~~~~---------~P~~~~GG~~~~~~~la~~L~~--------~G~----~V~vi~~~~~~~~-~~~~~~~~~~ 58 (485)
T 2qzs_A 1 MQVLHVCSEM---------FPLLKTGGLADVIGALPAAQIA--------DGV----DARVLLPAFPDIR-RGVTDAQVVS 58 (485)
T ss_dssp CEEEEECSCB---------TTTBCSSHHHHHHHHHHHHHHH--------TTC----EEEEEEECCHHHH-HHCTTCEEEE
T ss_pred CeEEEEeeec---------cccccCCcHHHHHHHHHHHHHH--------cCC----EEEEEecCccccc-cccccceeEE
Confidence 6999998652 24 579999999999999988 899 9999986422100 00000
Q ss_pred -------ccccc-cCCCCeEEEEecCCC---Cc--cccc----cccccccchhhHHHHHHHHHHHHHHhcC--CCceEEE
Q 005625 352 -------RLERV-SGTEHTHILRVPFRS---EK--GILR----QWISRFDVWPYLETFTEDVGSEITAELQ--GFPDFII 412 (687)
Q Consensus 352 -------~lE~i-~~~~~v~IlRvP~~~---~~--~~~~----~~isr~~iwp~Le~f~~~~~~~L~~~~~--~~PDLIH 412 (687)
..+.. ...+++.+++++... .. .+.. .|.. -+..+..|...+.+ +.+... .+|||||
T Consensus 59 ~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~Divh 134 (485)
T 2qzs_A 59 RRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTD---NVLRFALLGWVGAE-MASGLDPFWRPDVVH 134 (485)
T ss_dssp EECCTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCTT---HHHHHHHHHHHHHH-HTTTSSTTCCCSEEE
T ss_pred EecccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCCc---hHHHHHHHHHHHHH-HHHHhccCCCCCEEE
Confidence 00000 001478888887421 00 0000 0100 00001112222222 223222 6899999
Q ss_pred eCCCChhHHHHHHH-HcCCCcEEEEecCCccccC-CCC-----chhhhhhcc-cccccchhHHHHHHHhcCCEEEecCHH
Q 005625 413 GNYSDGNLVASLLA-YKMGITQCTIAHALEKTKY-PDS-----DIYWKKFDE-KYHFSCQFTADLIAMNNADFIITSTYQ 484 (687)
Q Consensus 413 ~Hys~aglvA~llA-r~lgVP~V~T~HaL~~~ky-~~s-----~l~w~~~~~-~y~~s~rf~aE~iam~~AD~IItsS~q 484 (687)
+|++..++++.+++ +..++|+|+|.|+...... ... ++.+..+.. ...+......++.+++.||.|||+|..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 214 (485)
T 2qzs_A 135 AHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPT 214 (485)
T ss_dssp EETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHH
T ss_pred eeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHH
Confidence 99988888888887 7899999999999742110 000 000000000 000111123467889999999999976
Q ss_pred HHhccccccccccccccccccccceeecccccCC--CcceEeeCCCCCCCCCCCChHH-----------Hhhhhhhhhhh
Q 005625 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEKQ-----------KRLTALHGSIE 551 (687)
Q Consensus 485 Ei~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~--pK~~VIpnGVD~~~F~p~~~~~-----------~r~~~l~~~i~ 551 (687)
.... +.... + ++.++++.+ ... .|+.|||||||.+.|.|..... .+ ...+..++
T Consensus 215 ~~~~----~~~~~-~-~~~~~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r 281 (485)
T 2qzs_A 215 YARE----ITEPQ-F-AYGMEGLLQ------QRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDK-AENKRQLQ 281 (485)
T ss_dssp HHHH----TTSHH-H-HTTCHHHHH------HHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGG-HHHHHHHH
T ss_pred HHHH----Hhccc-c-CcchHHHHH------hhccCCceEEEecCCCccccCccccccccccccccchhHH-HHhHHHHH
Confidence 5431 11100 0 000000000 011 5899999999999987754210 00 00001121
Q ss_pred hhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHH
Q 005625 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631 (687)
Q Consensus 552 ~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~ 631 (687)
+.+ +...++++++|+++||+.+.||++.|++|++.+.. ++++|+|+|++. .+ ..+.++
T Consensus 282 ~~~----------~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~-------~~---~~~~l~ 339 (485)
T 2qzs_A 282 IAM----------GLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGD-------PV---LQEGFL 339 (485)
T ss_dssp HHH----------TCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEEC-------HH---HHHHHH
T ss_pred HHc----------CCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCc-------hH---HHHHHH
Confidence 111 21111267899999999999999999999998764 478999998652 12 235677
Q ss_pred HHHHHcCCCCcEE-EcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 632 ELMKTYKLDGQFR-WIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 632 ~li~elgL~~~V~-flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
+++++++ ++|+ |+|+ +.+++.++|+.+ |+||+||.+ |||++++||.+
T Consensus 340 ~~~~~~~--~~v~~~~g~--~~~~~~~~~~~a----dv~v~pS~~E~~g~~~lEAma 388 (485)
T 2qzs_A 340 AAAAEYP--GQVGVQIGY--HEAFSHRIMGGA----DVILVPSRFEPCGLTQLYGLK 388 (485)
T ss_dssp HHHHHST--TTEEEEESC--CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHH
T ss_pred HHHHhCC--CcEEEeCCC--CHHHHHHHHHhC----CEEEECCccCCCcHHHHHHHH
Confidence 8888886 7886 8995 667778999864 999999999 99999999974
No 8
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.93 E-value=8.2e-25 Score=232.56 Aligned_cols=280 Identities=16% Similarity=0.172 Sum_probs=184.0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccCCCCeEEEEecCCCCccccc
Q 005625 298 LPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILR 377 (687)
Q Consensus 298 ~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~~~~v~IlRvP~~~~~~~~~ 377 (687)
.|..||..+++.+++++|.+ +|| +|.|+|...+.. .. ...+++.+.+++......
T Consensus 23 ~p~~GG~~~~~~~la~~L~~--------~G~----~V~v~~~~~~~~--------~~--~~~~~i~~~~~~~~~~~~--- 77 (394)
T 2jjm_A 23 YPSVGGSGVVGTELGKQLAE--------RGH----EIHFITSGLPFR--------LN--KVYPNIYFHEVTVNQYSV--- 77 (394)
T ss_dssp CC--CHHHHHHHHHHHHHHH--------TTC----EEEEECSSCC--------------CCCTTEEEECCCCC-------
T ss_pred CCCCCCHHHHHHHHHHHHHh--------CCC----EEEEEeCCCCCc--------cc--ccCCceEEEecccccccc---
Confidence 58899999999999999988 899 999998642211 11 112367777666543210
Q ss_pred cccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCCh-hHHHHHHHHcC--CCcEEEEecCCccccCCCCchhhhh
Q 005625 378 QWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKM--GITQCTIAHALEKTKYPDSDIYWKK 454 (687)
Q Consensus 378 ~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~a-glvA~llAr~l--gVP~V~T~HaL~~~ky~~s~l~w~~ 454 (687)
+...++...+...+.+.+.+ .+||+||+|++.. ++.+.++++.. ++|+|+|.|+..........
T Consensus 78 -----~~~~~~~~~~~~~l~~~l~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~----- 144 (394)
T 2jjm_A 78 -----FQYPPYDLALASKMAEVAQR---ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDP----- 144 (394)
T ss_dssp -----CCSCCHHHHHHHHHHHHHHH---HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTTCT-----
T ss_pred -----cccccccHHHHHHHHHHHHH---cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCCCH-----
Confidence 00011111223334444433 5899999997654 44455555554 59999999985332111000
Q ss_pred hcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeecccccCCCcceEeeCCCCCCCCC
Q 005625 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (687)
Q Consensus 455 ~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~ 534 (687)
.+ ...++..++.||.||++|..... .+.. .+ + ...|+.|||||+|.+.|.
T Consensus 145 ---~~-----~~~~~~~~~~ad~ii~~s~~~~~-------~~~~--------~~------~-~~~~~~vi~ngv~~~~~~ 194 (394)
T 2jjm_A 145 ---SL-----NNLIRFGIEQSDVVTAVSHSLIN-------ETHE--------LV------K-PNKDIQTVYNFIDERVYF 194 (394)
T ss_dssp ---TT-----HHHHHHHHHHSSEEEESCHHHHH-------HHHH--------HT------C-CSSCEEECCCCCCTTTCC
T ss_pred ---HH-----HHHHHHHHhhCCEEEECCHHHHH-------HHHH--------hh------C-CcccEEEecCCccHHhcC
Confidence 00 01345678999999999976543 1211 01 1 134899999999999887
Q ss_pred CCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCC
Q 005625 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYID 614 (687)
Q Consensus 535 p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d 614 (687)
+......| .+ +..++++++|+++||+.+.||++.|++|+..+... .+.+|+++|++..
T Consensus 195 ~~~~~~~~-----~~----------------~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~ 252 (394)
T 2jjm_A 195 KRDMTQLK-----KE----------------YGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE 252 (394)
T ss_dssp CCCCHHHH-----HH----------------TTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT
T ss_pred CcchHHHH-----HH----------------cCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH
Confidence 75432221 11 12335678999999999999999999999988654 4578998875421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 615 VNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 615 ~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
.+++.++++++++.++|.|+|+ .+++.++|+.+ |+||+||.+ |||++++||.+
T Consensus 253 ------------~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~a----dv~v~ps~~e~~~~~~~EAma 306 (394)
T 2jjm_A 253 ------------FCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMS----DLMLLLSEKESFGLVLLEAMA 306 (394)
T ss_dssp ------------HHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTC----SEEEECCSCCSCCHHHHHHHH
T ss_pred ------------HHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhC----CEEEeccccCCCchHHHHHHh
Confidence 2456788999999999999994 47889999854 999999999 99999999974
No 9
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.93 E-value=9e-25 Score=229.81 Aligned_cols=289 Identities=12% Similarity=0.084 Sum_probs=198.0
Q ss_pred cceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccccccc
Q 005625 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (687)
Q Consensus 278 ~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~ 357 (687)
.|||++++.+- .|..||...++.+++++| +|| +|.|+|...+.. ......
T Consensus 4 ~mkIl~v~~~~---------~p~~gG~~~~~~~l~~~L----------~g~----~v~v~~~~~~~~-------~~~~~~ 53 (394)
T 3okp_A 4 SRKTLVVTNDF---------PPRIGGIQSYLRDFIATQ----------DPE----SIVVFASTQNAE-------EAHAYD 53 (394)
T ss_dssp CCCEEEEESCC---------TTSCSHHHHHHHHHHTTS----------CGG----GEEEEEECSSHH-------HHHHHH
T ss_pred CceEEEEeCcc---------CCccchHHHHHHHHHHHh----------cCC----eEEEEECCCCcc-------chhhhc
Confidence 46999999752 367899999999999877 488 999998642211 001122
Q ss_pred CCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCc-EEEE
Q 005625 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT-QCTI 436 (687)
Q Consensus 358 ~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP-~V~T 436 (687)
...++.++++|..... ..+ .+...+.+.+.+ .+||+||+|..........++++.++| +|++
T Consensus 54 ~~~~~~~~~~~~~~~~----------~~~----~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (394)
T 3okp_A 54 KTLDYEVIRWPRSVML----------PTP----TTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIAS 116 (394)
T ss_dssp TTCSSEEEEESSSSCC----------SCH----HHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEE
T ss_pred cccceEEEEccccccc----------cch----hhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEEE
Confidence 2347899999875321 011 122234444433 689999999875443444447778998 8889
Q ss_pred ecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeeccccc
Q 005625 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (687)
Q Consensus 437 ~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v 516 (687)
.|+....... .. ... ...+..++.||.||++|..... .+..+ + .
T Consensus 117 ~h~~~~~~~~-~~-----------~~~--~~~~~~~~~~d~ii~~s~~~~~-------~~~~~--------~-------~ 160 (394)
T 3okp_A 117 THGHEVGWSM-LP-----------GSR--QSLRKIGTEVDVLTYISQYTLR-------RFKSA--------F-------G 160 (394)
T ss_dssp CCSTHHHHTT-SH-----------HHH--HHHHHHHHHCSEEEESCHHHHH-------HHHHH--------H-------C
T ss_pred eccchhhhhh-cc-----------hhh--HHHHHHHHhCCEEEEcCHHHHH-------HHHHh--------c-------C
Confidence 9986432110 00 001 1235678999999999975543 12110 1 1
Q ss_pred CCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhh
Q 005625 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (687)
Q Consensus 517 ~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~ 596 (687)
.+.|+.|||||+|.+.|.|...... ..+++ .+..++++++|+++||+.+.||++.|++|+.+
T Consensus 161 ~~~~~~vi~ngv~~~~~~~~~~~~~------~~~~~------------~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 222 (394)
T 3okp_A 161 SHPTFEHLPSGVDVKRFTPATPEDK------SATRK------------KLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQ 222 (394)
T ss_dssp SSSEEEECCCCBCTTTSCCCCHHHH------HHHHH------------HTTCCTTCCEEEEESCSCGGGCHHHHHHHHHH
T ss_pred CCCCeEEecCCcCHHHcCCCCchhh------HHHHH------------hcCCCcCceEEEEEeccccccCHHHHHHHHHH
Confidence 2359999999999999987544322 11221 12235567999999999999999999999998
Q ss_pred ccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCC--
Q 005625 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYV-- 674 (687)
Q Consensus 597 l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl-- 674 (687)
+....++.+|+|+|++.. . +.+++++ .++.++|+|+|+ ++++++.++|+.+ |+||+||.
T Consensus 223 l~~~~~~~~l~i~G~g~~---------~---~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~a----d~~v~ps~~~ 283 (394)
T 3okp_A 223 VIAARPDAQLLIVGSGRY---------E---STLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAA----DIFAMPARTR 283 (394)
T ss_dssp HHHHSTTCEEEEECCCTT---------H---HHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHC----SEEEECCCCB
T ss_pred HHhhCCCeEEEEEcCchH---------H---HHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhC----CEEEecCccc
Confidence 877667899999885422 2 3444555 678899999995 8999999999864 99999998
Q ss_pred -----C-CCchhhhcccC
Q 005625 675 -----H-PIPLNFLPSYK 686 (687)
Q Consensus 675 -----~-gFGLviLEa~~ 686 (687)
. |||++++||.+
T Consensus 284 ~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp GGGTBCCSSCHHHHHHHH
T ss_pred cccccccccCcHHHHHHH
Confidence 3 99999999975
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.92 E-value=1.1e-25 Score=235.59 Aligned_cols=288 Identities=13% Similarity=0.122 Sum_probs=186.3
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++.+. +..||..+++.+++++|.+ +|| +|.|+|....+. .
T Consensus 1 MkIl~i~~~~----------~~~gG~~~~~~~l~~~L~~--------~G~----~V~v~~~~~~~~--------~----- 45 (374)
T 2iw1_A 1 MIVAFCLYKY----------FPFGGLQRDFMRIASTVAA--------RGH----HVRVYTQSWEGD--------C----- 45 (374)
T ss_dssp -CEEEECSEE----------CTTCHHHHHHHHHHHHHHH--------TTC----CEEEEESEECSC--------C-----
T ss_pred CeEEEEEeec----------CCCcchhhHHHHHHHHHHh--------CCC----eEEEEecCCCCC--------C-----
Confidence 6999998652 2369999999999999988 899 999998642111 1
Q ss_pred CCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEEEEec
Q 005625 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~H 438 (687)
.+++.++++|...... ......+...+.+.+.+ .+||+||+|.+..+..+..+++..++|.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhc---cCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1378888888754311 11112233333334433 689999999865443222223333344444445
Q ss_pred CCccccCCCCchhhhhhcccccccchhHHHHHHHh--cCCEEEecCHHHHhccccccccccccccccccccceeeccccc
Q 005625 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN--NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (687)
Q Consensus 439 aL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~--~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v 516 (687)
+..... ...+.+.. ..+...+. .||.||++|..... .+.. .+ ++
T Consensus 112 ~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~-------~~~~--------~~------~~ 157 (374)
T 2iw1_A 112 GFLYRL-----------TSRYRHYA--AFERATFEQGKSTKLMMLTDKQIA-------DFQK--------HY------QT 157 (374)
T ss_dssp CHHHHT-----------SHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHH-------HHHH--------HH------CC
T ss_pred cchhhh-----------cHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHH-------HHHH--------Hh------CC
Confidence 432110 00011111 12344443 79999999875543 1211 01 11
Q ss_pred CCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhh
Q 005625 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (687)
Q Consensus 517 ~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~ 596 (687)
...|+.|||||+|.+.|.|......+ ..+++. +..++++++|+++||+.+.||++.|++|+..
T Consensus 158 ~~~~~~vi~ngv~~~~~~~~~~~~~~-----~~~~~~------------~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 158 EPERFQILPPGIYPDRKYSEQIPNSR-----EIYRQK------------NGIKEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp CGGGEEECCCCCCGGGSGGGSCTTHH-----HHHHHH------------TTCCTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred ChhheEEecCCcCHHhcCcccchhHH-----HHHHHH------------hCCCCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 22489999999999888764422211 112111 2234567899999999999999999999998
Q ss_pred cccc-CCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC
Q 005625 597 NSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH 675 (687)
Q Consensus 597 l~~l-~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~ 675 (687)
+... .++.+|+++|++.. +++.++++++++.++|.|+|+ .+++.++|+.+ |+||+||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~a----d~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSG---RNDVSELMAAA----DLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHC----SEEEECCSC
T ss_pred hHhccCCceEEEEEcCCCH-------------HHHHHHHHHcCCCCcEEECCC---cccHHHHHHhc----CEEEecccc
Confidence 7654 35778998875411 245678899999999999995 46899999864 999999999
Q ss_pred -CCchhhhcccC
Q 005625 676 -PIPLNFLPSYK 686 (687)
Q Consensus 676 -gFGLviLEa~~ 686 (687)
|||++++||.+
T Consensus 281 e~~~~~~~Ea~a 292 (374)
T 2iw1_A 281 EAAGIVLLEAIT 292 (374)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCcccHHHHHHH
Confidence 99999999974
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.91 E-value=3.4e-24 Score=226.74 Aligned_cols=285 Identities=13% Similarity=0.132 Sum_probs=184.3
Q ss_pred CccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccccc
Q 005625 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (687)
Q Consensus 276 p~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~ 355 (687)
.++|||+++++.. .|..||...++.+++++|.+ +|| +|.++|....... . .....
T Consensus 18 ~~~MkIl~i~~~~---------~~~~gG~~~~~~~l~~~L~~--------~G~----~V~v~~~~~~~~~---~-~~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYS---------FDVPGGVQSHVLQLAEVLRD--------AGH----EVSVLAPASPHVK---L-PDYVV 72 (406)
T ss_dssp ---CEEEEECSSC---------TTSCCHHHHHHHHHHHHHHH--------TTC----EEEEEESCCTTSC---C-CTTEE
T ss_pred CCcceEEEEeccC---------CCCCCcHHHHHHHHHHHHHH--------CCC----eEEEEecCCcccc---C-Ccccc
Confidence 3447999999541 24569999999999999888 899 9999987532210 0 01111
Q ss_pred ccCCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEEE
Q 005625 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (687)
Q Consensus 356 i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~ 435 (687)
. .+ .++++|.... .. +.. ++ ..+...+.+.+.+ .+||+||+|+......+.++++..++|+|+
T Consensus 73 ~---~~-~~~~~~~~~~--~~-----~~~-~~--~~~~~~l~~~l~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 S---GG-KAVPIPYNGS--VA-----RLR-FG--PATHRKVKKWIAE---GDFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp E---CC-CCC--------------------CC--HHHHHHHHHHHHH---HCCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred c---CC-cEEeccccCC--cc-----ccc-cc--HHHHHHHHHHHHh---cCCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 1 12 4555554321 00 011 11 1112233333433 489999999876555577778888999999
Q ss_pred EecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeecccc
Q 005625 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (687)
Q Consensus 436 T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~ 515 (687)
+.|+..... ..+..+ +. .+ + ..++.+|.||++|..... .+... +
T Consensus 136 ~~h~~~~~~-----~~~~~~---~~---~~--~-~~~~~~d~ii~~s~~~~~-------~~~~~--------~------- 179 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSVF---QG---IL--R-PYHEKIIGRIAVSDLARR-------WQMEA--------L------- 179 (406)
T ss_dssp EECCCCCSH-----HHHHHH---HS---TT--H-HHHTTCSEEEESSHHHHH-------HHHHH--------H-------
T ss_pred EEcCcchhh-----hhHHHH---HH---HH--H-HHHhhCCEEEECCHHHHH-------HHHHh--------c-------
Confidence 999853211 111111 11 11 2 678999999999865443 12110 0
Q ss_pred cCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecC-CcCCCHHHHHHHH
Q 005625 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DHVKNMTGLVECY 594 (687)
Q Consensus 516 v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRL-dp~Kni~~LVeAf 594 (687)
...++ +||||+|.+.|.+.... . . ..+++++|+++||+ .+.||++.|++|+
T Consensus 180 -~~~~~-vi~~~v~~~~~~~~~~~--------~----------------~--~~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 180 -GSDAV-EIPNGVDVASFADAPLL--------D----------------G--YPREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp -SSCEE-ECCCCBCHHHHHTCCCC--------T----------------T--CSCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred -CCCcE-EecCCCChhhcCCCchh--------h----------------h--ccCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 12478 99999997665443210 0 0 12256899999999 9999999999999
Q ss_pred hhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCC
Q 005625 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYV 674 (687)
Q Consensus 595 a~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl 674 (687)
.++....++++|+|+|++ + + +++.++++++ .++|.|+|+ ++.+++.++|+.+ |+||+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~-~--------~----~~l~~~~~~~--~~~v~~~g~-~~~~~~~~~~~~a----dv~v~ps~ 291 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRG-D--------E----DELREQAGDL--AGHLRFLGQ-VDDATKASAMRSA----DVYCAPHL 291 (406)
T ss_dssp HHHHTTSTTCEEEEESCS-C--------H----HHHHHHTGGG--GGGEEECCS-CCHHHHHHHHHHS----SEEEECCC
T ss_pred HHHHHHCCCeEEEEEcCC-c--------H----HHHHHHHHhc--cCcEEEEec-CCHHHHHHHHHHC----CEEEecCC
Confidence 988776678899988754 1 1 3556677776 789999995 8889999999964 99999997
Q ss_pred -C-CCchhhhcccC
Q 005625 675 -H-PIPLNFLPSYK 686 (687)
Q Consensus 675 -~-gFGLviLEa~~ 686 (687)
+ |||++++||.+
T Consensus 292 ~~e~~~~~~~Ea~a 305 (406)
T 2gek_A 292 GGESFGIVLVEAMA 305 (406)
T ss_dssp SCCSSCHHHHHHHH
T ss_pred CCCCCchHHHHHHH
Confidence 7 99999999964
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.90 E-value=1.1e-23 Score=225.64 Aligned_cols=289 Identities=13% Similarity=0.061 Sum_probs=179.3
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++++ +..||..+++.+++++|.+ +|| +|.|++...+. . .......+..
T Consensus 41 mkIl~v~~~-----------~~~GG~~~~~~~l~~~L~~--------~G~----~v~v~~~~~~~---~-~~~~~~~~~~ 93 (416)
T 2x6q_A 41 RSFVHVNST-----------SFGGGVAEILHSLVPLLRS--------IGI----EARWFVIEGPT---E-FFNVTKTFHN 93 (416)
T ss_dssp CEEEEEESC-----------SSSSTHHHHHHHHHHHHHH--------TTC----EEEEEECCCCH---H-HHHHHHHHHH
T ss_pred cEEEEEeCC-----------CCCCCHHHHHHHHHHHHHh--------CCC----eEEEEEccCCc---c-hhhhhcccce
Confidence 699999865 3579999999999999887 899 99888753111 0 0000000000
Q ss_pred -CCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhc-CCCceEEEeCCCChhHHHHHHHHcCCCcEEEE
Q 005625 359 -TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (687)
Q Consensus 359 -~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~-~~~PDLIH~Hys~aglvA~llAr~lgVP~V~T 436 (687)
..+...+ ++. . ..+.....+. ..+.+.+ ..+||+||+|.+....++.++++ ++|+|+|
T Consensus 94 ~~~~~~~~--~~~-----------~-~~~~~~~~~~----~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~ 153 (416)
T 2x6q_A 94 ALQGNESL--KLT-----------E-EMKELYLNVN----RENSKFIDLSSFDYVLVHDPQPAALIEFYEK--KSPWLWR 153 (416)
T ss_dssp HHTTCCSC--CCC-----------H-HHHHHHHHHH----HHHHHSSCGGGSSEEEEESSTTGGGGGGSCC--CSCEEEE
T ss_pred eecccccc--ccc-----------H-HHHHHHHHHH----HHHHHHHhhcCCCEEEEeccchhhHHHHHHh--cCCEEEE
Confidence 0011000 000 0 0011111111 1222222 34899999998765444444333 3999999
Q ss_pred ecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEE-ecCHHHHhccccccccccccccccccccceeecccc
Q 005625 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII-TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (687)
Q Consensus 437 ~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~II-tsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~ 515 (687)
.|+..... ....|.. ....+..+|.+| ++|. ... +.
T Consensus 154 ~h~~~~~~---~~~~~~~-------------~~~~~~~~~~~i~~~s~-~~~-------~~------------------- 190 (416)
T 2x6q_A 154 CHIDLSSP---NREFWEF-------------LRRFVEKYDRYIFHLPE-YVQ-------PE------------------- 190 (416)
T ss_dssp CCSCCSSC---CHHHHHH-------------HHHHHTTSSEEEESSGG-GSC-------TT-------------------
T ss_pred EccccCCc---cHHHHHH-------------HHHHHHhCCEEEEechH-HHH-------hh-------------------
Confidence 99853221 1111211 123456777766 4442 211 10
Q ss_pred cCCCcceEeeCCCCCCCCCCCCh-HHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHH
Q 005625 516 VFDPKFNIVSPGADMDIYFPYSE-KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (687)
Q Consensus 516 v~~pK~~VIpnGVD~~~F~p~~~-~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAf 594 (687)
....|+.|||||+|...|.+... ...+ ..+++ .+..++++++|+++||+.+.||++.|++|+
T Consensus 191 ~~~~~~~vi~ngvd~~~~~~~~~~~~~~-----~~~r~------------~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 253 (416)
T 2x6q_A 191 LDRNKAVIMPPSIDPLSEKNVELKQTEI-----LRILE------------RFDVDPEKPIITQVSRFDPWKGIFDVIEIY 253 (416)
T ss_dssp SCTTTEEECCCCBCTTSTTTSCCCHHHH-----HHHHH------------HTTCCTTSCEEEEECCCCTTSCHHHHHHHH
T ss_pred CCccceEEeCCCCChhhhcccccChhhH-----HHHHH------------HhCCCCCCcEEEEEeccccccCHHHHHHHH
Confidence 11248999999999887764321 1111 11211 122356789999999999999999999999
Q ss_pred hhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccC---cccHHHHHHHhhcCCcEEEE
Q 005625 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN---RARNGELYRYIADTKGAFVQ 671 (687)
Q Consensus 595 a~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~---~~dl~elYr~aad~~dVFVl 671 (687)
..+....++.+|+|+|++.. .+.+ ..+.++++++++++.++|+|+|+ ++ ++++.++|+.+ |+||+
T Consensus 254 ~~l~~~~~~~~l~i~G~g~~----~~~~---~~~~l~~~~~~~~~~~~V~~~G~-~~~~~~~~~~~~~~~a----d~~v~ 321 (416)
T 2x6q_A 254 RKVKEKIPGVQLLLVGVMAH----DDPE---GWIYFEKTLRKIGEDYDVKVLTN-LIGVHAREVNAFQRAS----DVILQ 321 (416)
T ss_dssp HHHHHHCTTCEEEEEECCCT----TCHH---HHHHHHHHHHHHTTCTTEEEEEG-GGTCCHHHHHHHHHHC----SEEEE
T ss_pred HHHHHhCCCeEEEEEecCcc----cchh---HHHHHHHHHHHhCCCCcEEEecc-cCCCCHHHHHHHHHhC----CEEEE
Confidence 98876667899999986532 1122 22456788999999999999995 43 56899999864 99999
Q ss_pred cCCC-CCchhhhcccC
Q 005625 672 VYVH-PIPLNFLPSYK 686 (687)
Q Consensus 672 PSl~-gFGLviLEa~~ 686 (687)
||.+ |||++++||.+
T Consensus 322 ps~~E~~~~~~lEAma 337 (416)
T 2x6q_A 322 MSIREGFGLTVTEAMW 337 (416)
T ss_dssp CCSSCSSCHHHHHHHH
T ss_pred CCCcCCCccHHHHHHH
Confidence 9999 99999999975
No 13
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.90 E-value=8.5e-23 Score=212.95 Aligned_cols=245 Identities=12% Similarity=0.050 Sum_probs=171.3
Q ss_pred ceEEEEccCCCCCC-CCC-C-CCC-CCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccc
Q 005625 279 FNVVILSPHGYFGQ-ANV-L-GLP-DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (687)
Q Consensus 279 ~rIliiS~Hg~f~~-~~v-l-G~P-dtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE 354 (687)
|||++++.+ +.++ .+. . ..| ..||..+++.+++++|.+ +|| +|.++|...+.. .
T Consensus 4 mkIl~v~~~-~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~--------~G~----~v~v~~~~~~~~-------~-- 61 (342)
T 2iuy_A 4 LKVALVNIP-LRVPGSDAWISVPPQGYGGIQWVVANLMDGLLE--------LGH----EVFLLGAPGSPA-------G-- 61 (342)
T ss_dssp CEEEEECCC-CBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHH--------TTC----EEEEESCTTSCC-------C--
T ss_pred cEEEEEecc-ccccCcccccccCcccCChHHHHHHHHHHHHHH--------cCC----eEEEEecCCCCC-------C--
Confidence 699999976 1110 000 0 123 469999999999999988 899 999998642111 0
Q ss_pred cccCCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEE
Q 005625 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (687)
Q Consensus 355 ~i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V 434 (687)
.+++.+++.+ .|. .+.+.+.+ .+||+||+|++..+..+ ++..++| |
T Consensus 62 ----~~~~~~~~~~----------------~~~-------~l~~~l~~---~~~Dvi~~~~~~~~~~~---~~~~~~p-v 107 (342)
T 2iuy_A 62 ----RPGLTVVPAG----------------EPE-------EIERWLRT---ADVDVVHDHSGGVIGPA---GLPPGTA-F 107 (342)
T ss_dssp ----STTEEECSCC----------------SHH-------HHHHHHHH---CCCSEEEECSSSSSCST---TCCTTCE-E
T ss_pred ----CCcceeccCC----------------cHH-------HHHHHHHh---cCCCEEEECCchhhHHH---HhhcCCC-E
Confidence 0234432111 011 22333333 58999999987654433 6778999 9
Q ss_pred EEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeeccc
Q 005625 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (687)
Q Consensus 435 ~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi 514 (687)
+|.|+..... . .||.||++|..... .+.
T Consensus 108 ~~~h~~~~~~---------------~-------------~~d~ii~~S~~~~~-------~~~----------------- 135 (342)
T 2iuy_A 108 ISSHHFTTRP---------------V-------------NPVGCTYSSRAQRA-------HCG----------------- 135 (342)
T ss_dssp EEEECSSSBC---------------S-------------CCTTEEESCHHHHH-------HTT-----------------
T ss_pred EEecCCCCCc---------------c-------------cceEEEEcCHHHHH-------HHh-----------------
Confidence 9999863210 0 18999999876543 121
Q ss_pred ccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHH
Q 005625 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (687)
Q Consensus 515 ~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAf 594 (687)
. ..|+.|||||+|.+.|.+... ..+++++|+++||+.+.||++.|++|+
T Consensus 136 ~--~~~~~vi~ngvd~~~~~~~~~-----------------------------~~~~~~~i~~vG~~~~~Kg~~~li~a~ 184 (342)
T 2iuy_A 136 G--GDDAPVIPIPVDPARYRSAAD-----------------------------QVAKEDFLLFMGRVSPHKGALEAAAFA 184 (342)
T ss_dssp C--CTTSCBCCCCBCGGGSCCSTT-----------------------------CCCCCSCEEEESCCCGGGTHHHHHHHH
T ss_pred c--CCceEEEcCCCChhhcCcccc-----------------------------cCCCCCEEEEEeccccccCHHHHHHHH
Confidence 1 248999999999887765321 013457899999999999999999999
Q ss_pred hhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCC
Q 005625 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYV 674 (687)
Q Consensus 595 a~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl 674 (687)
+.+ +.+|+|+|++.. . +.+++++++++ ++|+|+|+ ++++++.++|+.+ |+||+||.
T Consensus 185 ~~~-----~~~l~i~G~g~~---------~---~~l~~~~~~~~--~~v~~~g~-~~~~~l~~~~~~a----dv~v~ps~ 240 (342)
T 2iuy_A 185 HAC-----GRRLVLAGPAWE---------P---EYFDEITRRYG--STVEPIGE-VGGERRLDLLASA----HAVLAMSQ 240 (342)
T ss_dssp HHH-----TCCEEEESCCCC---------H---HHHHHHHHHHT--TTEEECCC-CCHHHHHHHHHHC----SEEEECCC
T ss_pred Hhc-----CcEEEEEeCccc---------H---HHHHHHHHHhC--CCEEEecc-CCHHHHHHHHHhC----CEEEECCc
Confidence 875 578998875422 2 24456777777 89999995 8989999999864 99999999
Q ss_pred ----------C-CCchhhhcccC
Q 005625 675 ----------H-PIPLNFLPSYK 686 (687)
Q Consensus 675 ----------~-gFGLviLEa~~ 686 (687)
+ |||++++||.+
T Consensus 241 ~~~~~~~~~~~E~~~~~~~EAma 263 (342)
T 2iuy_A 241 AVTGPWGGIWCEPGATVVSEAAV 263 (342)
T ss_dssp CCCCTTCSCCCCCCCHHHHHHHH
T ss_pred ccccccccccccCccHHHHHHHh
Confidence 8 99999999975
No 14
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.90 E-value=5e-23 Score=219.81 Aligned_cols=281 Identities=10% Similarity=0.024 Sum_probs=181.2
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++++ .|..||...|+.+++++|.+ + | +|.|+|.... |.. ...
T Consensus 1 MkI~~v~~~----------~p~~gG~~~~~~~l~~~L~~--------~-~----~V~v~~~~~~---g~~---~~~---- 47 (413)
T 3oy2_A 1 MKLIIVGAH----------SSVPSGYGRVMRAIVPRISK--------A-H----EVIVFGIHAF---GRS---VHA---- 47 (413)
T ss_dssp CEEEEEEEC----------TTCCSHHHHHHHHHHHHHTT--------T-S----EEEEEEESCC---SCC---SCS----
T ss_pred CeEEEecCC----------CCCCCCHHHHHHHHHHHHHh--------c-C----CeEEEeecCC---Ccc---ccc----
Confidence 699999976 36779999999999998877 6 7 9999886422 110 000
Q ss_pred CCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCc----EE
Q 005625 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT----QC 434 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP----~V 434 (687)
........... .++.+-+....|. .+.+.+.+ .+||+||+|++ .+..+.++++..++| .+
T Consensus 48 --~~~~~~~~~~~---~~~~~~~~~~~~~-------~l~~~l~~---~~~Div~~~~~-~~~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 48 --NIEEFDAQTAE---HVRGLNEQGFYYS-------GLSEFIDV---HKPDIVMIYND-PIVIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp --SSEEEEHHHHH---HHTTCCSTTCCHH-------HHHHHHHH---HCCSEEEEEEC-HHHHHHHHHHGGGCCSCCEEE
T ss_pred --ccccCCccccc---cccccccccchHH-------HHHHHHHh---cCCCEEEEcch-HHHHHHHHHHhccCCCCCcee
Confidence 11110100000 0110100001111 23333433 58999999954 455677777777766 34
Q ss_pred EEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCC--EEEecCHHHHhccccccccccccccccccccceeec
Q 005625 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH 512 (687)
Q Consensus 435 ~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD--~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~ 512 (687)
.+.|...... .. . . +..++.|| .||++|..... .+..+
T Consensus 112 ~~~~~~~~~~--------~~-----~-~------~~~~~~~~~~~ii~~S~~~~~-------~~~~~------------- 151 (413)
T 3oy2_A 112 LYVDLVSKNI--------RE-----N-L------WWIFSHPKVVGVMAMSKCWIS-------DICNY------------- 151 (413)
T ss_dssp EEECCCSBSC--------CG-----G-G------GGGGGCTTEEEEEESSTHHHH-------HHHHT-------------
T ss_pred eeccccchhh--------HH-----H-H------HHHHhccCCceEEEcCHHHHH-------HHHHc-------------
Confidence 4455432110 00 0 0 13467888 99998865443 12111
Q ss_pred ccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCCcCCCHHHHHH
Q 005625 513 GIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592 (687)
Q Consensus 513 gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVe 592 (687)
+. +.|+.|||||+|.+.| + . .| .+. +.....++++|+++||+.+.||++.|++
T Consensus 152 --~~-~~~~~vi~ngvd~~~~-~--~--~~-----~~~--------------~~~~~~~~~~il~vGr~~~~Kg~~~li~ 204 (413)
T 3oy2_A 152 --GC-KVPINIVSHFVDTKTI-Y--D--AR-----KLV--------------GLSEYNDDVLFLNMNRNTARKRLDIYVL 204 (413)
T ss_dssp --TC-CSCEEECCCCCCCCCC-T--T--HH-----HHT--------------TCGGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred --CC-CCceEEeCCCCCHHHH-H--H--HH-----Hhc--------------CCCcccCceEEEEcCCCchhcCcHHHHH
Confidence 12 3599999999999887 1 1 11 111 1111126789999999999999999999
Q ss_pred HHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCc-------EEEcCcccCcccHHHHHHHhhcC
Q 005625 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ-------FRWIAAQTNRARNGELYRYIADT 665 (687)
Q Consensus 593 Afa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~-------V~flG~~l~~~dl~elYr~aad~ 665 (687)
|++++.+..++.+|+|+|++.+ ....+ ..+.+.++++++|+.++ |.|.|+ ++++++.++|+.+
T Consensus 205 a~~~l~~~~~~~~l~ivG~g~~-~~~~~-----l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~a--- 274 (413)
T 3oy2_A 205 AAARFISKYPDAKVRFLCNSHH-ESKFD-----LHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNAC--- 274 (413)
T ss_dssp HHHHHHHHCTTCCEEEEEECCT-TCSCC-----HHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHC---
T ss_pred HHHHHHHhCCCcEEEEEeCCcc-cchhh-----HHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhC---
Confidence 9999877677889999986532 11111 12456788999999998 888895 8999999999964
Q ss_pred CcEEEEcCCC-CCchhhhcccC
Q 005625 666 KGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 666 ~dVFVlPSl~-gFGLviLEa~~ 686 (687)
|+||+||.+ |||++++||.+
T Consensus 275 -dv~v~pS~~E~~~~~~lEAma 295 (413)
T 3oy2_A 275 -DVIVNCSSGEGFGLCSAEGAV 295 (413)
T ss_dssp -SEEEECCSCCSSCHHHHHHHT
T ss_pred -CEEEeCCCcCCCCcHHHHHHH
Confidence 999999999 99999999975
No 15
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.81 E-value=8.3e-19 Score=183.70 Aligned_cols=265 Identities=12% Similarity=0.041 Sum_probs=170.1
Q ss_pred cceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccccccc
Q 005625 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (687)
Q Consensus 278 ~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~ 357 (687)
.|||++++. .+||.+..+.+++++|.+ +|| +|.++|...+. ..+.+.
T Consensus 6 ~mkIl~~~~-------------~~gG~~~~~~~la~~L~~--------~G~----~V~v~~~~~~~--------~~~~~~ 52 (364)
T 1f0k_A 6 GKRLMVMAG-------------GTGGHVFPGLAVAHHLMA--------QGW----QVRWLGTADRM--------EADLVP 52 (364)
T ss_dssp -CEEEEECC-------------SSHHHHHHHHHHHHHHHT--------TTC----EEEEEECTTST--------HHHHGG
T ss_pred CcEEEEEeC-------------CCccchhHHHHHHHHHHH--------cCC----EEEEEecCCcc--------hhhhcc
Confidence 379999971 258998889999988877 899 99999863110 001111
Q ss_pred CCCCeEEEEecCCCCccc-cccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEEEE
Q 005625 358 GTEHTHILRVPFRSEKGI-LRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (687)
Q Consensus 358 ~~~~v~IlRvP~~~~~~~-~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~T 436 (687)
..++.+++++....... ...++ ...+..+ .....+.+.+.+ .+||+||+|....++.+.++++..|+|+|++
T Consensus 53 -~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 53 -KHGIEIDFIRISGLRGKGIKALI--AAPLRIF-NAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp -GGTCEEEECCCCCCTTCCHHHHH--TCHHHHH-HHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred -ccCCceEEecCCccCcCccHHHH--HHHHHHH-HHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 13678888776432100 00000 0111111 112233333333 5899999998766677888889999999999
Q ss_pred ecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeeccccc
Q 005625 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (687)
Q Consensus 437 ~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v 516 (687)
.|+... + + .+++..+.+|.+++++... +
T Consensus 126 ~~~~~~------~--~--------------~~~~~~~~~d~v~~~~~~~----------~-------------------- 153 (364)
T 1f0k_A 126 EQNGIA------G--L--------------TNKWLAKIATKVMQAFPGA----------F-------------------- 153 (364)
T ss_dssp ECSSSC------C--H--------------HHHHHTTTCSEEEESSTTS----------S--------------------
T ss_pred ecCCCC------c--H--------------HHHHHHHhCCEEEecChhh----------c--------------------
Confidence 997421 1 0 1123456789999875310 1
Q ss_pred CCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCE-EEEEecCCcCCCHHHHHHHHh
Q 005625 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECYG 595 (687)
Q Consensus 517 ~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPi-Il~VGRLdp~Kni~~LVeAfa 595 (687)
+++.+|+||+|.+.|.+.... .+. ...+++++ +++.||+.++||++.|++|+.
T Consensus 154 --~~~~~i~n~v~~~~~~~~~~~--------~~~----------------~~~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 154 --PNAEVVGNPVRTDVLALPLPQ--------QRL----------------AGREGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp --SSCEECCCCCCHHHHTSCCHH--------HHH----------------TTCCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred --CCceEeCCccchhhcccchhh--------hhc----------------ccCCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 267899999997766543211 111 12345564 455579999999999999998
Q ss_pred hccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC
Q 005625 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH 675 (687)
Q Consensus 596 ~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~ 675 (687)
++.. +.++++++|+.+ .+++.+++++++++ +|+|+|+ + +++.++|+.+ |+||+||
T Consensus 208 ~l~~---~~~~l~i~G~~~------------~~~l~~~~~~~~~~-~v~~~g~-~--~~~~~~~~~a----d~~v~~s-- 262 (364)
T 1f0k_A 208 KLGD---SVTIWHQSGKGS------------QQSVEQAYAEAGQP-QHKVTEF-I--DDMAAAYAWA----DVVVCRS-- 262 (364)
T ss_dssp HHGG---GEEEEEECCTTC------------HHHHHHHHHHTTCT-TSEEESC-C--SCHHHHHHHC----SEEEECC--
T ss_pred HhcC---CcEEEEEcCCch------------HHHHHHHHhhcCCC-ceEEecc-h--hhHHHHHHhC----CEEEECC--
Confidence 8754 466444444321 13566788888885 6999996 4 6899999864 9999999
Q ss_pred CCchhhhcccC
Q 005625 676 PIPLNFLPSYK 686 (687)
Q Consensus 676 gFGLviLEa~~ 686 (687)
| |++++||.+
T Consensus 263 g-~~~~~EAma 272 (364)
T 1f0k_A 263 G-ALTVSEIAA 272 (364)
T ss_dssp C-HHHHHHHHH
T ss_pred c-hHHHHHHHH
Confidence 4 899999864
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.79 E-value=3.8e-19 Score=194.19 Aligned_cols=277 Identities=11% Similarity=0.017 Sum_probs=167.9
Q ss_pred CccceEEEEccCCCCCCCCCCCCCC--CCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccc
Q 005625 276 PMVFNVVILSPHGYFGQANVLGLPD--TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRL 353 (687)
Q Consensus 276 p~~~rIliiS~Hg~f~~~~vlG~Pd--tGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~l 353 (687)
+..|||++++++- .|. .||.. .+.+++++|++ +|| +|.|+|+.. .+. ....
T Consensus 44 ~~~mrI~~v~~~~---------~p~~~~GG~~-~v~~la~~L~~--------~Gh----eV~Vvt~~~-~~~----~~~~ 96 (413)
T 2x0d_A 44 IKGKRLNLLVPSI---------NQEHMFGGIS-TALKLFEQFDN--------KKF----KKRIILTDA-TPN----PKDL 96 (413)
T ss_dssp CCSCEEEEEESCC---------CGGGCSHHHH-HHHHHHTTSCT--------TTC----EEEEEESSC-CCC----HHHH
T ss_pred CCCceEEEEeCCC---------CccccccHHH-HHHHHHHHHHH--------cCC----ceEEEEecC-CCC----hHHH
Confidence 4447999999873 344 46664 58888888877 899 999999752 111 0011
Q ss_pred ccccCCCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHH------
Q 005625 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY------ 427 (687)
Q Consensus 354 E~i~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr------ 427 (687)
..+. +... .|+.....+.. .++.+.. .. ..... ..+||+||+|+|.++..+..+++
T Consensus 97 ~~~~---~~~~--~~~~~~~~~~~------~i~~~~~----~~-~~~~~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 2x0d_A 97 QSFK---SFKY--VMPEEDKDFAL------QIVPFND----RY-NRTIP--VAKHDIFIATAWWTAYAAQRIVSWQSDTY 158 (413)
T ss_dssp GGGT---TSEE--CCTTCCCCCSE------EEEECSC----CT-TCCEE--ECTTEEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred Hhhh---ccce--eeccCCccccc------eeeeccc----cc-ccccc--CCCCCEEEEehHHHHHHHHHhhhhhhhhc
Confidence 1111 1111 12221110100 0110000 00 00001 24799999999877766655421
Q ss_pred -cCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCC--EEEecCHHHHhccccccccccccccccc
Q 005625 428 -KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTL 504 (687)
Q Consensus 428 -~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD--~IItsS~qEi~~~~~~v~qyes~~~f~l 504 (687)
..+.|.+..+|+.+...+.... . + ..++..++.++ .+||+|...... +.++
T Consensus 159 ~~~~~~~~~~v~~~~~~~~~~~~-~-------~------~~~~~~~~~~~~~~vi~~S~~~~~~----l~~~-------- 212 (413)
T 2x0d_A 159 GIPPNKILYIIQDFEPGFYQWSS-Q-------Y------VLAESTYKYRGPQIAVFNSELLKQY----FNNK-------- 212 (413)
T ss_dssp TCCCCCEEEEECSCGGGGSCSSH-H-------H------HHHHHTTSCCSCEEEEEESHHHHHH----HHHH--------
T ss_pred ccccCcEEEEEeechhhcCccCh-H-------H------HHHHHHhccCCceEEEEcCHHHHHH----HHHc--------
Confidence 1356788777876443221110 0 0 11233455554 578877654321 1111
Q ss_pred cccceeecccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecC-Cc
Q 005625 505 PGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DH 583 (687)
Q Consensus 505 p~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRL-dp 583 (687)
|+ ..+++.++|||+|.+.|.+.. ...++++.|+++||+ .+
T Consensus 213 --------g~--~~~~~~~i~~g~d~~~~~~~~-----------------------------~~~~~~~~il~~gr~~~~ 253 (413)
T 2x0d_A 213 --------GY--NFTDEYFFQPKINTTLKNYIN-----------------------------DKRQKEKIILVYGRPSVK 253 (413)
T ss_dssp --------TC--CCSEEEEECCCCCHHHHTTTT-----------------------------SCCCCCSEEEEEECTTCG
T ss_pred --------CC--CCCceEEeCCCcCchhhcccc-----------------------------cccCCCCEEEEEecCchh
Confidence 11 124789999999966443210 012345789999997 68
Q ss_pred CCCHHHHHHHHhhccccCCC---ceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHH
Q 005625 584 VKNMTGLVECYGKNSQLREL---VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660 (687)
Q Consensus 584 ~Kni~~LVeAfa~l~~l~~~---~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr 660 (687)
+||++.|++|++.+....++ .+|+++|++.. . .++++.++|+|+|+ +++++++++|+
T Consensus 254 ~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~------~-------------~~l~~~~~v~f~G~-~~~~~l~~~~~ 313 (413)
T 2x0d_A 254 RNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHK------D-------------IALGKGIHLNSLGK-LTLEDYADLLK 313 (413)
T ss_dssp GGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCC------C-------------EEEETTEEEEEEES-CCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCch------h-------------hhcCCcCcEEEcCC-CCHHHHHHHHH
Confidence 99999999999988654443 68898886522 0 24678889999995 89999999999
Q ss_pred HhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 661 YIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 661 ~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
.| |+||+||.+ +||++++||.+
T Consensus 314 ~a----dv~v~pS~~E~~g~~~lEAmA 336 (413)
T 2x0d_A 314 RS----SIGISLMISPHPSYPPLEMAH 336 (413)
T ss_dssp HC----CEEECCCSSSSCCSHHHHHHH
T ss_pred hC----CEEEEecCCCCCCcHHHHHHh
Confidence 65 999999999 99999999975
No 17
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.79 E-value=2.1e-18 Score=197.74 Aligned_cols=245 Identities=13% Similarity=0.082 Sum_probs=150.0
Q ss_pred CCceEEEeCCCChhHHHHHHHH-cCCCcEEEEecCCccccC----CCCchhhhhhc--------ccccccchhHHHHHHH
Q 005625 406 GFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKY----PDSDIYWKKFD--------EKYHFSCQFTADLIAM 472 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr-~lgVP~V~T~HaL~~~ky----~~s~l~w~~~~--------~~y~~s~rf~aE~iam 472 (687)
.+|||+|+|+|..++++.+++. ..++|.|+|+|++....+ -..++++. +. ....+...+..|+.++
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~-L~~~~~d~ea~~~~i~~~~~~EKaga 258 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNC-LESVDVDHEAGRFGIYHRYCIERAAA 258 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHH-GGGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhh-hhhcCCChhhhhhchhHHHHHHHHHH
Confidence 6799999999999999999875 569999999999853332 11122321 10 0112223456788999
Q ss_pred hcCCEEEecCH---HHHhccccccccccccccccccccceeecccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhh
Q 005625 473 NNADFIITSTY---QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (687)
Q Consensus 473 ~~AD~IItsS~---qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~ 549 (687)
..||.|+|+|. +|+. . |+. ..++ .|||||||.+.|.|...........+.+
T Consensus 259 ~~AD~ITTVS~~yA~Ei~-------~-----------Ll~-------r~~d-~iIpNGID~~~f~p~~~~~~~k~~aK~k 312 (725)
T 3nb0_A 259 HSADVFTTVSQITAFEAE-------H-----------LLK-------RKPD-GILPNGLNVIKFQAFHEFQNLHALKKEK 312 (725)
T ss_dssp HHSSEEEESSHHHHHHHH-------H-----------HTS-------SCCS-EECCCCBCCCCCSSTTHHHHHHHHHHHH
T ss_pred HhCCEEEECCHHHHHHHH-------H-----------Hhc-------CCCC-EEEcCCccccccCcchhhHHHHHHHHHH
Confidence 99999999985 3443 1 111 1233 3399999999999863321111112233
Q ss_pred hhhhhcCCCccccc-ccCCCC-CCCCEEEEEecCC-cCCCHHHHHHHHhhcccc----CCC---ceEEEEEccCCCC---
Q 005625 550 IEQLLFDPEQNDEH-VGTLSD-RSKPIVFSMARLD-HVKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVN--- 616 (687)
Q Consensus 550 i~~ll~~~~~~~~~-~g~l~~-~~kPiIl~VGRLd-p~Kni~~LVeAfa~l~~l----~~~---~nLVLVGG~~d~~--- 616 (687)
+.+.+.+ .. .++..+ .++++|+++||++ ++||++.|++|+.++... ..+ +-++++.++....
T Consensus 313 lq~~l~~-----~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~ 387 (725)
T 3nb0_A 313 INDFVRG-----HFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVE 387 (725)
T ss_dssp HHHHHHH-----HTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHH
T ss_pred HHHHHHh-----hcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchh
Confidence 3221100 00 123333 3456778889999 789999999999988643 111 2334444331110
Q ss_pred ----------------------------------------CC-CChHH------HH------------------------
Q 005625 617 ----------------------------------------KS-KDREE------IA------------------------ 625 (687)
Q Consensus 617 ----------------------------------------~s-~d~ee------~~------------------------ 625 (687)
+- .|.++ .-
T Consensus 388 ~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~ 467 (725)
T 3nb0_A 388 ALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNM 467 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEE
T ss_pred hhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeec
Confidence 00 01110 00
Q ss_pred ---HHHHHHHHHHHcCCCCc------EEEcCcccCcc------cHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 626 ---EIEKMHELMKTYKLDGQ------FRWIAAQTNRA------RNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 626 ---el~~L~~li~elgL~~~------V~flG~~l~~~------dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
.-..+.+.+++++|.++ |.|.+-.++.. ++.++|+.| |+||+||+| |||+++|||.+
T Consensus 468 ~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~a----dvfV~PS~~EgfGl~~LEAmA 540 (725)
T 3nb0_A 468 VDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGC----HLGVFPSYYEPWGYTPAECTV 540 (725)
T ss_dssp TTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHC----SEEECCCSSBSSCHHHHHHHH
T ss_pred ccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhc----eEEEeccccCCCCHHHHHHHH
Confidence 01133456677888877 66664347665 589999865 999999999 99999999964
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.78 E-value=2e-19 Score=195.19 Aligned_cols=180 Identities=11% Similarity=-0.031 Sum_probs=124.9
Q ss_pred CceEEEeCCCChhHHHHHHHHcCCCcEEEEecCCcc-ccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHH
Q 005625 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEK-TKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (687)
Q Consensus 407 ~PDLIH~Hys~aglvA~llAr~lgVP~V~T~HaL~~-~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qE 485 (687)
+||+||.+...++.++ .+++.+++|+|+|.|+... ..... .... ...++.+++.||.||++|...
T Consensus 124 ~~DvIh~~~~~~~~~~-~~~~~~~~p~v~~~h~~~~~~~~~~-----------~~~~--~~~~~~~~~~ad~vi~~S~~~ 189 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFI-ELAKRVNPAAKLVYRASDGLSTINV-----------ASYI--EREFDRVAPTLDVIALVSPAM 189 (406)
T ss_dssp HCSEEEEESSGGGGGH-HHHHHHCTTSEEEEEESSCHHHHTC-----------CHHH--HHHHHHHGGGCSEEEESCGGG
T ss_pred CCCEEEECCchHHHHH-HHHHHhCCCEEEEEeccchhhcccc-----------cHHH--HHHHHHHHHhCCEEEEcCHHH
Confidence 6899994433322211 4566789999999997532 10000 0011 123567899999999998654
Q ss_pred HhccccccccccccccccccccceeecccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCccccccc
Q 005625 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (687)
Q Consensus 486 i~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g 565 (687)
.. .+.. .. |+.|||||||.+.|.+... .
T Consensus 190 ~~-------~~~~------------------~~-~i~vipngvd~~~f~~~~~--------------------------~ 217 (406)
T 2hy7_A 190 AA-------EVVS------------------RD-NVFHVGHGVDHNLDQLGDP--------------------------S 217 (406)
T ss_dssp GG-------GCSC------------------ST-TEEECCCCBCTTHHHHHCS--------------------------C
T ss_pred HH-------HHHh------------------cC-CEEEEcCCcChHhcCcccc--------------------------c
Confidence 32 1211 01 8999999999876632110 0
Q ss_pred CCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 005625 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (687)
Q Consensus 566 ~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~f 645 (687)
...++++|+++||+.+.||+ ++++. +..++.+|+|+|++. ++++++.++|+|
T Consensus 218 --~~~~~~~i~~vGrl~~~Kg~---~~~l~---~~~~~~~l~ivG~g~--------------------~~~~~l~~~V~f 269 (406)
T 2hy7_A 218 --PYAEGIHAVAVGSMLFDPEF---FVVAS---KAFPQVTFHVIGSGM--------------------GRHPGYGDNVIV 269 (406)
T ss_dssp --SCCSSEEEEEECCTTBCHHH---HHHHH---HHCTTEEEEEESCSS--------------------CCCTTCCTTEEE
T ss_pred --ccCCCcEEEEEeccccccCH---HHHHH---HhCCCeEEEEEeCch--------------------HHhcCCCCCEEE
Confidence 01234789999999999999 44443 234678999887531 456789999999
Q ss_pred cCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhccc
Q 005625 646 IAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSY 685 (687)
Q Consensus 646 lG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~ 685 (687)
+|+ ++++++.++|+.+ |+||+||.+ |||++++||.
T Consensus 270 ~G~-~~~~~l~~~~~~a----dv~v~ps~~E~~~~~~lEAm 305 (406)
T 2hy7_A 270 YGE-MKHAQTIGYIKHA----RFGIAPYASEQVPVYLADSS 305 (406)
T ss_dssp ECC-CCHHHHHHHHHTC----SEEECCBSCSCCCTTHHHHC
T ss_pred cCC-CCHHHHHHHHHhc----CEEEECCCcccCchHHHHHH
Confidence 995 8999999999854 999999999 9999999996
No 19
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.72 E-value=1.3e-17 Score=186.39 Aligned_cols=238 Identities=11% Similarity=0.002 Sum_probs=137.4
Q ss_pred CCceEEEeCCCChhHHHHHHHHcC-CCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHH
Q 005625 406 GFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr~l-gVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~q 484 (687)
..+|+||+|.+...+++.+++++. ++|++++.|... +.+. .|..+ ..+ ..-...+..+|.|...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pf----p~~~-~~~~l------p~~-~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPF----PTPE-IFNAL------PTY-DTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCC----CCHH-HHTTS------TTH-HHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCC----CCHH-HHhhC------ccH-HHHHHhhhccCeEEEECHH
Confidence 467999999887777777776654 899999999742 2111 11110 000 0012345677887766543
Q ss_pred HHhccccccccccccccccccccceeecccccCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccc
Q 005625 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (687)
Q Consensus 485 Ei~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~ 564 (687)
.....-......... .....+..+ ..| ...++.|||||||.+.|.+....... .. ..++++
T Consensus 190 ~~~~f~~~~~~~l~~-~~~~~~~~~-~~g---~~~~v~vip~GID~~~f~~~~~~~~~-~~-~~~lr~------------ 250 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRV-TTRSAKSHT-AWG---KAFRTEVYPIGIEPKEIAKQAAGPLP-PK-LAQLKA------------ 250 (482)
T ss_dssp HHHHHHHHHHHHSCE-EEETTTEEE-ETT---EEEEEEECCCCCCHHHHHHHHHSCCC-HH-HHHHHH------------
T ss_pred HHHHHHHHHHHHhCC-ccccCCeEE-ECC---eEEEEEEEeccCCHHHHHHHhcCcch-HH-HHHHHH------------
Confidence 221000000000000 000000000 001 11389999999998887542110000 00 011221
Q ss_pred cCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCC----CceEEEEEccCCCCCCCChHH-HHHHHHHHHHHHHc--
Q 005625 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE-IAEIEKMHELMKTY-- 637 (687)
Q Consensus 565 g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~----~~nLVLVGG~~d~~~s~d~ee-~~el~~L~~li~el-- 637 (687)
.+ .++++|+++|||++.||++.+++||+++.+..+ .+.|++||+... .|+++ ....+++.+++.+.
T Consensus 251 ~~---~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~----~~~~~~~~l~~~l~~l~~~in~ 323 (482)
T 1uqt_A 251 EL---KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR----GDVQAYQDIRHQLENEAGRING 323 (482)
T ss_dssp HT---TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS----TTSHHHHHHHHHHHHHHHHHHH
T ss_pred Hh---CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc----cchHHHHHHHHHHHHHHHHHhh
Confidence 11 157899999999999999999999998754333 466888875311 12332 22334556666553
Q ss_pred --CCCC--cEEE-cCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 638 --KLDG--QFRW-IAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 638 --gL~~--~V~f-lG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
|..+ .|+| .| .++++++..+|+.| |+||+||++ |||+|++||.+
T Consensus 324 ~~g~~~~~~v~~~~g-~v~~~el~~ly~~A----Dv~v~pS~~EGfgLv~lEAmA 373 (482)
T 1uqt_A 324 KYGQLGWTPLYYLNQ-HFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVA 373 (482)
T ss_dssp HHCBTTBCSEEEECS-CCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHH
T ss_pred hcccCCCceEEEeCC-CCCHHHHHHHHHHc----cEEEECCCcccCCchHHHHHH
Confidence 3322 4665 57 58999999999965 999999999 99999999964
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.72 E-value=3.1e-17 Score=183.04 Aligned_cols=100 Identities=9% Similarity=-0.016 Sum_probs=83.9
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCC-CcEEEcCc
Q 005625 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIAA 648 (687)
Q Consensus 570 ~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~-~~V~flG~ 648 (687)
+++++++++||+.+ ||++.|++|++++.+..++.+|+|+|++ ++. .++++++++++|+. ++|+|+|+
T Consensus 374 ~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~--------g~~---~~~l~~~~~~~~l~~~~v~~~g~ 441 (568)
T 2vsy_A 374 PEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGP--------GEA---DARLRAFAHAQGVDAQRLVFMPK 441 (568)
T ss_dssp CTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCS--------TTH---HHHHHHHHHHTTCCGGGEEEECC
T ss_pred CCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCC--------HHH---HHHHHHHHHHcCCChhHEEeeCC
Confidence 34457779999999 9999999999988766678899998733 222 35677889999998 99999995
Q ss_pred ccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 649 QTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 649 ~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++++++.++|+.+ |+||+||.+|||++++||.+
T Consensus 442 -~~~~~~~~~~~~a----dv~v~ps~~~~g~~~lEAma 474 (568)
T 2vsy_A 442 -LPHPQYLARYRHA----DLFLDTHPYNAHTTASDALW 474 (568)
T ss_dssp -CCHHHHHHHGGGC----SEEECCSSSCCSHHHHHHHH
T ss_pred -CCHHHHHHHHhcC----CEEeeCCCCCCcHHHHHHHh
Confidence 8888999999854 99999998899999999974
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.68 E-value=1.4e-16 Score=167.08 Aligned_cols=203 Identities=10% Similarity=0.073 Sum_probs=125.7
Q ss_pred CCceEEEeCCC-ChhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHH
Q 005625 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (687)
Q Consensus 406 ~~PDLIH~Hys-~aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~q 484 (687)
.+||+||+|.. ..++.+.++++..++|+|++.|+... +. .|.. +... .......+.+|.|+++|..
T Consensus 94 ~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~~----~~~~------~~~~-~~~~~~~~~~d~ii~~s~~ 160 (375)
T 3beo_A 94 AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--WD----KYSP------YPEE-MNRQLTGVMADLHFSPTAK 160 (375)
T ss_dssp HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--SC----TTSS------TTHH-HHHHHHHHHCSEEEESSHH
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--cc----ccCC------ChhH-hhhhHHhhhhheeeCCCHH
Confidence 58999999865 46677788889999999999887621 11 0100 0000 1122334569999999876
Q ss_pred HHhccccccccccccccccccccceeecccccCCCcceEeeCC-CCCCCCCCCChHHHhhhhhhhhhhhhhcCCCccccc
Q 005625 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (687)
Q Consensus 485 Ei~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnG-VD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~ 563 (687)
... .+..+ ++...|+.||+|| +|...|.+..... .++++
T Consensus 161 ~~~-------~~~~~---------------g~~~~~i~vi~n~~~d~~~~~~~~~~~-------~~~~~----------- 200 (375)
T 3beo_A 161 SAT-------NLQKE---------------NKDESRIFITGNTAIDALKTTVKETYS-------HPVLE----------- 200 (375)
T ss_dssp HHH-------HHHHT---------------TCCGGGEEECCCHHHHHHHHHCCSSCC-------CHHHH-----------
T ss_pred HHH-------HHHHc---------------CCCcccEEEECChhHhhhhhhhhhhhh-------HHHHH-----------
Confidence 543 12111 1122389999999 7865543321000 00111
Q ss_pred ccCCCCCCCCEEEEEecCCcC-CCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCc
Q 005625 564 VGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (687)
Q Consensus 564 ~g~l~~~~kPiIl~VGRLdp~-Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~ 642 (687)
.+ .+++.+++++||+.+. ||++.|++|+.++....++.+++ +|++++ .+.. +.+++++ +..++
T Consensus 201 -~~--~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i-~~~g~~------~~~~---~~~~~~~---~~~~~ 264 (375)
T 3beo_A 201 -KL--GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVV-YPVHMN------PVVR---ETANDIL---GDYGR 264 (375)
T ss_dssp -TT--TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEE-EECCSC------HHHH---HHHHHHH---TTCTT
T ss_pred -hc--cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEE-EeCCCC------HHHH---HHHHHHh---hccCC
Confidence 11 2233467899999986 99999999999876544566654 454321 1111 2222222 33479
Q ss_pred EEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 643 FRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 643 V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
|+|+|+ ++..++.++|+.+ |+||+|| |.+++||.+
T Consensus 265 v~~~g~-~~~~~~~~~~~~a----d~~v~~s----g~~~lEA~a 299 (375)
T 3beo_A 265 IHLIEP-LDVIDFHNVAARS----YLMLTDS----GGVQEEAPS 299 (375)
T ss_dssp EEEECC-CCHHHHHHHHHTC----SEEEECC----HHHHHHHHH
T ss_pred EEEeCC-CCHHHHHHHHHhC----cEEEECC----CChHHHHHh
Confidence 999994 7777888888854 9999999 677889864
No 22
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.65 E-value=1.2e-15 Score=160.71 Aligned_cols=210 Identities=11% Similarity=0.058 Sum_probs=126.9
Q ss_pred CCceEEEeCCC-ChhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHH
Q 005625 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (687)
Q Consensus 406 ~~PDLIH~Hys-~aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~q 484 (687)
.+||+||+|.. ..++.+.++++..++|+|++.|++.. +. .|..+ ... .......+.+|.|+++|..
T Consensus 85 ~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--~~----~~~~~------~~~-~~~~~~~~~~d~ii~~s~~ 151 (384)
T 1vgv_A 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT--GD----LYSPW------PEE-ANRTLTGHLAMYHFSPTET 151 (384)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC--SC----TTSST------THH-HHHHHHHTTCSEEEESSHH
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--cc----ccCCC------chH-hhHHHHHhhccEEEcCcHH
Confidence 58999999975 56677788889999999999998732 11 01100 000 0112234569999999865
Q ss_pred HHhccccccccccccccccccccceeecccccCCCcceEeeCCC-CCCCCCCCChHHHhhhhhhhhhhhhhcCCCccccc
Q 005625 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (687)
Q Consensus 485 Ei~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGV-D~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~ 563 (687)
... .+..+ ++...|+.+|+||+ |...+.+ .....+ ...+.++++
T Consensus 152 ~~~-------~l~~~---------------g~~~~~i~vi~n~~~d~~~~~~-~~~~~~-~~~~~~~~~----------- 196 (384)
T 1vgv_A 152 SRQ-------NLLRE---------------NVADSRIFITGNTVIDALLWVR-DQVMSS-DKLRSELAA----------- 196 (384)
T ss_dssp HHH-------HHHHT---------------TCCGGGEEECCCHHHHHHHHHH-HHTTTC-HHHHHHHHT-----------
T ss_pred HHH-------HHHHc---------------CCChhhEEEeCChHHHHHHhhh-hccccc-hhhhHHHHH-----------
Confidence 543 12111 11123899999995 4221111 000000 000001111
Q ss_pred ccCC-CCCCCC-EEEEEecCCcC-CCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCC
Q 005625 564 VGTL-SDRSKP-IVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (687)
Q Consensus 564 ~g~l-~~~~kP-iIl~VGRLdp~-Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~ 640 (687)
.+. .+++++ +++++||+.+. ||++.|++|+.++....++.++++++|. + ++.+ +++++++ +..
T Consensus 197 -~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~-~------~~~~---~~l~~~~---~~~ 262 (384)
T 1vgv_A 197 -NYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHL-N------PNVR---EPVNRIL---GHV 262 (384)
T ss_dssp -TCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCB-C------HHHH---HHHHHHH---TTC
T ss_pred -hccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCC-C------HHHH---HHHHHHh---hcC
Confidence 112 223344 67899999987 9999999999987655566777765443 1 1222 3333443 234
Q ss_pred CcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 641 ~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++|+|+|+ ++.+++.++|+.| |+||+|| |.+++||.+
T Consensus 263 ~~v~~~g~-~~~~~~~~~~~~a----d~~v~~S----g~~~lEA~a 299 (384)
T 1vgv_A 263 KNVILIDP-QEYLPFVWLMNHA----WLILTDS----GGIQEEAPS 299 (384)
T ss_dssp TTEEEECC-CCHHHHHHHHHHC----SEEEESS----STGGGTGGG
T ss_pred CCEEEeCC-CCHHHHHHHHHhC----cEEEECC----cchHHHHHH
Confidence 68999984 7778899999865 9999999 555889875
No 23
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.59 E-value=4.8e-15 Score=165.91 Aligned_cols=231 Identities=12% Similarity=0.042 Sum_probs=141.1
Q ss_pred CceEEEeCCCChhHHHHHHHH-cCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHH
Q 005625 407 FPDFIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (687)
Q Consensus 407 ~PDLIH~Hys~aglvA~llAr-~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qE 485 (687)
.-|+|..|...--+++..+.+ .-+.+..+-.|.- ++.+.+ |..+.. +... .-...|-.||.|.-.|..-
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiP----fPs~e~-f~~Lp~--~~r~---ell~gll~~DligF~t~~y 218 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIP----WPSADY-WRILPK--EIRT---GILHGMLPATTIGFFADRW 218 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSC----CCCHHH-HTTSCH--HHHH---HHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCC----CCCHHH-HhhCcH--hHHH---HHHHHHHhCCEEEEecHHH
Confidence 568999998766666666654 4578999999964 222211 111100 0001 1146789999999988754
Q ss_pred Hhcccccccccccccccccccccee--ecccccCC--CcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCccc
Q 005625 486 IAGTKNTVGQYESHTAFTLPGLYRV--VHGIDVFD--PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND 561 (687)
Q Consensus 486 i~~~~~~v~qyes~~~f~lp~Lyrv--v~gi~v~~--pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~ 561 (687)
.. .+.+.+.--+|++.-. -.++.... .++.|+|+|||++.|.+...+ . +.++++.
T Consensus 219 ~~-------~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-~-----~~~lr~~-------- 277 (496)
T 3t5t_A 219 CR-------NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-L-----PEGIEEW-------- 277 (496)
T ss_dssp HH-------HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-C-----CTTHHHH--------
T ss_pred HH-------HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-H-----HHHHHHH--------
Confidence 43 2222111112121100 00011111 278999999999999765421 1 1222221
Q ss_pred ccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCC---CceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcC
Q 005625 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE---LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (687)
Q Consensus 562 ~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~---~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elg 638 (687)
+ .++++|++||||++.||+..+++|| ++.+..+ .+.|++||+... +...+..+..+++++++.+.|
T Consensus 278 ----~---~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr---~~~~~y~~l~~~l~~lv~~in 346 (496)
T 3t5t_A 278 ----A---DGHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR---LYVPANADYVHRVETAVAEAN 346 (496)
T ss_dssp ----H---TTSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC---TTSHHHHHHHHHHHHHHHHHH
T ss_pred ----h---CCceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC---CCchHHHHHHHHHHHHHHHhc
Confidence 1 1578999999999999999999999 7755444 345777774311 111223333345566666543
Q ss_pred ----CCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhccc
Q 005625 639 ----LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSY 685 (687)
Q Consensus 639 ----L~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~ 685 (687)
.. .|+|+| .++.+++..+|+.| |+||+||++ |||+|++||.
T Consensus 347 ~~~g~~-~V~f~g-~v~~~el~aly~~A----Dv~vv~SlrEGfgLv~~Eam 392 (496)
T 3t5t_A 347 AELGSD-TVRIDN-DNDVNHTIACFRRA----DLLIFNSTVDGQNLSTFEAP 392 (496)
T ss_dssp HHHCTT-SEEEEE-CCCHHHHHHHHHHC----SEEEECCSSBSCCSHHHHHH
T ss_pred cccCCc-CEEEeC-CCCHHHHHHHHHhc----cEEEECcccccCChhHHHHH
Confidence 33 799999 58999999999965 999999999 9999999985
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.56 E-value=1e-14 Score=153.89 Aligned_cols=200 Identities=12% Similarity=0.052 Sum_probs=121.1
Q ss_pred CCceEEEeCCC-ChhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHH
Q 005625 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (687)
Q Consensus 406 ~~PDLIH~Hys-~aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~q 484 (687)
.+||+||+|.. ..++.+.++|+.+|+|+|++.|+... +. . |.. +... ....+..+.+|.++++|..
T Consensus 90 ~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--~~---~-~~~------~~~~-~~~~~~~~~~~~~~~~s~~ 156 (376)
T 1v4v_A 90 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--GN---L-KEP------FPEE-ANRRLTDVLTDLDFAPTPL 156 (376)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--SC---T-TSS------TTHH-HHHHHHHHHCSEEEESSHH
T ss_pred cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc--cc---c-cCC------CchH-HHHHHHHHHhceeeCCCHH
Confidence 68999999965 34566678899999999866555421 10 0 000 0000 1123455679999999865
Q ss_pred HHhccccccccccccccccccccceeecccccCCCcceEeeCCC-CCCCCCCCChHHHhhhhhhhhhhhhhcCCCccccc
Q 005625 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (687)
Q Consensus 485 Ei~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGV-D~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~ 563 (687)
... .+..+ ++...|+.+|+|++ |...+.+ .+ .+++
T Consensus 157 ~~~-------~l~~~---------------g~~~~ki~vi~n~~~d~~~~~~-----~~-----~~~~------------ 192 (376)
T 1v4v_A 157 AKA-------NLLKE---------------GKREEGILVTGQTGVDAVLLAA-----KL-----GRLP------------ 192 (376)
T ss_dssp HHH-------HHHTT---------------TCCGGGEEECCCHHHHHHHHHH-----HH-----CCCC------------
T ss_pred HHH-------HHHHc---------------CCCcceEEEECCchHHHHhhhh-----hh-----hHHH------------
Confidence 433 12110 12123899999864 4211100 00 0010
Q ss_pred ccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 005625 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (687)
Q Consensus 564 ~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V 643 (687)
..+ ++++.+++++||+...||++.|++|+.++....++.++++++|+ + ++.+ ++++++++ ..++|
T Consensus 193 -~~~-~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~-~------~~~~---~~l~~~~~---~~~~v 257 (376)
T 1v4v_A 193 -EGL-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHL-N------PVVR---EAVFPVLK---GVRNF 257 (376)
T ss_dssp -TTC-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCS-C------HHHH---HHHHHHHT---TCTTE
T ss_pred -Hhc-CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCC-C------HHHH---HHHHHHhc---cCCCE
Confidence 111 22344677899999999999999999987655566777765442 1 2222 33444443 24689
Q ss_pred EEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 644 RWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 644 ~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
+|+|. ++..++.++|+.| |+||+|| .|+ ++||.+
T Consensus 258 ~~~g~-~g~~~~~~~~~~a----d~~v~~S---~g~-~lEA~a 291 (376)
T 1v4v_A 258 VLLDP-LEYGSMAALMRAS----LLLVTDS---GGL-QEEGAA 291 (376)
T ss_dssp EEECC-CCHHHHHHHHHTE----EEEEESC---HHH-HHHHHH
T ss_pred EEECC-CCHHHHHHHHHhC----cEEEECC---cCH-HHHHHH
Confidence 99984 6667899999854 9999999 355 778864
No 25
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.47 E-value=1e-13 Score=133.30 Aligned_cols=127 Identities=13% Similarity=0.068 Sum_probs=94.0
Q ss_pred eeCCCCCCCCC--CCCh--HHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEEecCC-cCCCHHHHHHHHhhcc
Q 005625 524 VSPGADMDIYF--PYSE--KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNS 598 (687)
Q Consensus 524 IpnGVD~~~F~--p~~~--~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~VGRLd-p~Kni~~LVeAfa~l~ 598 (687)
||||||.+.|. |... .+.+ ..+++ .+. .+++++|+++||+. +.||++.+++|+..+.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~-----~~~r~------------~~~-~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERK-----KSLLS------------KFG-MDEGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHH-----HHHHH------------HTT-CCSCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCccChhhccccccccchhhHH-----HHHHH------------HcC-CCCCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 79999999998 7652 0001 11111 111 23567999999999 9999999999999886
Q ss_pred --ccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE-cCcccCcccHHHHHHHhhcCCcEEEEcCCC
Q 005625 599 --QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQTNRARNGELYRYIADTKGAFVQVYVH 675 (687)
Q Consensus 599 --~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~f-lG~~l~~~dl~elYr~aad~~dVFVlPSl~ 675 (687)
...++++|+++|++. .+ ..+++++++++++ +|+| +|+ ++++++.++|+.+ |++|+||.+
T Consensus 64 ~~~~~~~~~l~i~G~~~-------~~---~~~~l~~~~~~~~---~v~~~~g~-~~~~~~~~~~~~a----d~~l~ps~~ 125 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGD-------PE---LEGWARSLEEKHG---NVKVITEM-LSREFVRELYGSV----DFVIIPSYF 125 (200)
T ss_dssp TSGGGGGEEEEEECCBC-------HH---HHHHHHHHHHHCT---TEEEECSC-CCHHHHHHHHTTC----SEEEECCSC
T ss_pred hhccCCCeEEEEECCCC-------hH---HHHHHHHHHHhcC---CEEEEecc-CCHHHHHHHHHHC----CEEEECCCC
Confidence 545678899887542 11 2356778888887 9999 995 8888999999854 999999999
Q ss_pred -CCchhhhcccC
Q 005625 676 -PIPLNFLPSYK 686 (687)
Q Consensus 676 -gFGLviLEa~~ 686 (687)
+||++++||.+
T Consensus 126 e~~~~~~~Ea~a 137 (200)
T 2bfw_A 126 EPFGLVALEAMC 137 (200)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCccHHHHHHHH
Confidence 99999999974
No 26
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.40 E-value=3.4e-12 Score=137.13 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=74.0
Q ss_pred CEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCC--------CcEE
Q 005625 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------GQFR 644 (687)
Q Consensus 573 PiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~--------~~V~ 644 (687)
|++++.|+ ..||++.|++|++++.+..++++|+|||+++ ++ .++++++++++|+. ++|.
T Consensus 197 ~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~---------~~--~~~l~~~~~~~gl~~~~~~~~~~~v~ 263 (374)
T 2xci_A 197 EFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHI---------EN--AKIFEKKARDFGFKTSFFENLEGDVI 263 (374)
T ss_dssp CEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSG---------GG--HHHHHHHHHHTTCCEEETTCCCSSEE
T ss_pred CEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCH---------HH--HHHHHHHHHHCCCceEEecCCCCcEE
Confidence 67777776 4689999999999887666788999998542 11 13567788999987 5788
Q ss_pred EcCcccCcccHHHHHHHhhcCCcEEEEcCCC--CCchhhhcccC
Q 005625 645 WIAAQTNRARNGELYRYIADTKGAFVQVYVH--PIPLNFLPSYK 686 (687)
Q Consensus 645 flG~~l~~~dl~elYr~aad~~dVFVlPSl~--gFGLviLEa~~ 686 (687)
+.|+ .++++.+|+.+ |+||+||.+ +||++++||.+
T Consensus 264 ~~~~---~~dl~~~y~~a----Dv~vl~ss~~e~gg~~~lEAmA 300 (374)
T 2xci_A 264 LVDR---FGILKELYPVG----KIAIVGGTFVNIGGHNLLEPTC 300 (374)
T ss_dssp ECCS---SSCHHHHGGGE----EEEEECSSSSSSCCCCCHHHHT
T ss_pred EECC---HHHHHHHHHhC----CEEEECCcccCCCCcCHHHHHH
Confidence 8884 36899999865 999888765 68999999975
No 27
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.30 E-value=3.4e-12 Score=119.24 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=78.9
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccC
Q 005625 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (687)
Q Consensus 572 kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~ 651 (687)
+++|+++||+.+.||++.|++|+.+++. .++.+|+++|++.. .+.+.++++++++ +|+| |+ ++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~~------------~~~~~~~~~~~~~--~v~~-g~-~~ 64 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQDIVLLLKGKGPD------------EKKIKLLAQKLGV--KAEF-GF-VN 64 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT-GGGEEEEEECCSTT------------HHHHHHHHHHHTC--EEEC-CC-CC
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc-CCCeEEEEEeCCcc------------HHHHHHHHHHcCC--eEEE-ee-cC
Confidence 4689999999999999999999998743 36788898875421 2456778899988 8999 95 88
Q ss_pred cccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 652 RARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 652 ~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
++++.++|+.+ |+||+||.+ |||++++||.+
T Consensus 65 ~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama 96 (166)
T 3qhp_A 65 SNELLEILKTC----TLYVHAANVESEAIACLEAIS 96 (166)
T ss_dssp HHHHHHHHTTC----SEEEECCCSCCCCHHHHHHHH
T ss_pred HHHHHHHHHhC----CEEEECCcccCccHHHHHHHh
Confidence 99999999854 999999999 99999999975
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.23 E-value=1.3e-11 Score=117.89 Aligned_cols=98 Identities=10% Similarity=0.096 Sum_probs=82.8
Q ss_pred CCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHH--HcCCCCcEEE
Q 005625 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK--TYKLDGQFRW 645 (687)
Q Consensus 568 ~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~--elgL~~~V~f 645 (687)
.+.++++|+++||+.+.||++.+++|+.++ ++.+|+++|++.+ . ++++++++ ++++.++|+|
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~------~------~~l~~~~~~~~~~l~~~v~~ 82 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK------G------DHAERYARKIMKIAPDNVKF 82 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT------T------STHHHHHHHHHHHSCTTEEE
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc------H------HHHHHHHHhhhcccCCcEEE
Confidence 356789999999999999999999999876 4678999886532 1 24456677 7899999999
Q ss_pred cCcccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 646 IAAQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 646 lG~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
+|+ ++++++.++|+.+ |++|+||.+ +||++++||.+
T Consensus 83 ~g~-~~~~e~~~~~~~a----di~v~ps~~e~~~~~~~Eama 119 (177)
T 2f9f_A 83 LGS-VSEEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMA 119 (177)
T ss_dssp EES-CCHHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHH
T ss_pred eCC-CCHHHHHHHHHhC----CEEEeCCCcCCCChHHHHHHH
Confidence 995 8989999999965 999999999 99999999974
No 29
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.00 E-value=2.9e-09 Score=113.26 Aligned_cols=85 Identities=12% Similarity=0.083 Sum_probs=54.7
Q ss_pred CCCC-EEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCc
Q 005625 570 RSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (687)
Q Consensus 570 ~~kP-iIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~ 648 (687)
+++| +++++|++. .|+...+.+++..+... ..++++++|+.. +.+ ++. ++.++|+|+|+
T Consensus 240 ~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~-----~~~------~l~------~~~~~v~~~~~ 299 (412)
T 3otg_A 240 TARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSL-----DVS------GLG------EVPANVRLESW 299 (412)
T ss_dssp TTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSC-----CCT------TCC------CCCTTEEEESC
T ss_pred CCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCC-----Chh------hhc------cCCCcEEEeCC
Confidence 3444 567788886 77777777777655442 467777666432 011 111 35789999996
Q ss_pred ccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 649 QTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 649 ~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
+ ++.++|+.+ |+||.+|- +.+++||.
T Consensus 300 -~---~~~~~l~~a----d~~v~~~g---~~t~~Ea~ 325 (412)
T 3otg_A 300 -V---PQAALLPHV----DLVVHHGG---SGTTLGAL 325 (412)
T ss_dssp -C---CHHHHGGGC----SEEEESCC---HHHHHHHH
T ss_pred -C---CHHHHHhcC----cEEEECCc---hHHHHHHH
Confidence 5 477888753 99997762 36777775
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.00 E-value=3.3e-08 Score=105.69 Aligned_cols=267 Identities=13% Similarity=0.054 Sum_probs=145.5
Q ss_pred ccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccc
Q 005625 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (687)
Q Consensus 277 ~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i 356 (687)
|..||+|.. ..|||.+.-.+.++++|.+ +|| +|..+|.. + |. +-+.+
T Consensus 1 M~~~i~i~~-------------GGTgGHi~palala~~L~~--------~g~----~V~~vg~~--~--g~----e~~~v 47 (365)
T 3s2u_A 1 MKGNVLIMA-------------GGTGGHVFPALACAREFQA--------RGY----AVHWLGTP--R--GI----ENDLV 47 (365)
T ss_dssp --CEEEEEC-------------CSSHHHHHHHHHHHHHHHH--------TTC----EEEEEECS--S--ST----HHHHT
T ss_pred CCCcEEEEc-------------CCCHHHHHHHHHHHHHHHh--------CCC----EEEEEECC--c--hH----hhchh
Confidence 455787754 1489987777777766655 899 99988742 1 10 11111
Q ss_pred cCCCCeEEEEecCCCCcc-ccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCCcEEE
Q 005625 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (687)
Q Consensus 357 ~~~~~v~IlRvP~~~~~~-~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgVP~V~ 435 (687)
. ..|+.+..+|..+..+ ...+++. .+|..+..+. .+.+.+ + +.+||+|+++....+..+.++|+.+|+|+++
T Consensus 48 ~-~~g~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~l-~--~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 48 P-KAGLPLHLIQVSGLRGKGLKSLVK--APLELLKSLF-QALRVI-R--QLRPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp G-GGTCCEEECC----------------CHHHHHHHHH-HHHHHH-H--HHCCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred h-hcCCcEEEEECCCcCCCCHHHHHH--HHHHHHHHHH-HHHHHH-H--hcCCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 1 2356677777643321 0001110 1122222221 222333 3 3689999999877777888899999999985
Q ss_pred EecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHHHhccccccccccccccccccccceeecccc
Q 005625 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (687)
Q Consensus 436 T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~ 515 (687)
.-.+ ..+ +. +-++..+.|+.|.++.... +.
T Consensus 121 he~n----~~~--G~----------------~nr~l~~~a~~v~~~~~~~----------~~------------------ 150 (365)
T 3s2u_A 121 HEQN----AVA--GT----------------ANRSLAPIARRVCEAFPDT----------FP------------------ 150 (365)
T ss_dssp EECS----SSC--CH----------------HHHHHGGGCSEEEESSTTS----------SC------------------
T ss_pred Eecc----hhh--hh----------------HHHhhccccceeeeccccc----------cc------------------
Confidence 3211 111 10 1134456788887653211 10
Q ss_pred cCCCcceEeeCCCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccccCCCCCCCCEEEEE-ecCCcCCCHHHHHHHH
Q 005625 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSM-ARLDHVKNMTGLVECY 594 (687)
Q Consensus 516 v~~pK~~VIpnGVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~g~l~~~~kPiIl~V-GRLdp~Kni~~LVeAf 594 (687)
...|..++.|.+..+.+.+... ....+++++.++.+ |++...+.-+.+.+|+
T Consensus 151 -~~~k~~~~g~pvr~~~~~~~~~--------------------------~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al 203 (365)
T 3s2u_A 151 -ASDKRLTTGNPVRGELFLDAHA--------------------------RAPLTGRRVNLLVLGGSLGAEPLNKLLPEAL 203 (365)
T ss_dssp -C---CEECCCCCCGGGCCCTTS--------------------------SCCCTTSCCEEEECCTTTTCSHHHHHHHHHH
T ss_pred -CcCcEEEECCCCchhhccchhh--------------------------hcccCCCCcEEEEECCcCCccccchhhHHHH
Confidence 1236777777776554432110 11124456665555 6888888888899999
Q ss_pred hhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCC
Q 005625 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYV 674 (687)
Q Consensus 595 a~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl 674 (687)
+.+... ....++.++|..+ .+.+.+..++.+. ++.+.|| + ++++++|..| |++|.-|
T Consensus 204 ~~l~~~-~~~~vi~~~G~~~------------~~~~~~~~~~~~~--~~~v~~f-~--~dm~~~l~~a----DlvI~ra- 260 (365)
T 3s2u_A 204 AQVPLE-IRPAIRHQAGRQH------------AEITAERYRTVAV--EADVAPF-I--SDMAAAYAWA----DLVICRA- 260 (365)
T ss_dssp HTSCTT-TCCEEEEECCTTT------------HHHHHHHHHHTTC--CCEEESC-C--SCHHHHHHHC----SEEEECC-
T ss_pred Hhcccc-cceEEEEecCccc------------cccccceeccccc--ccccccc-h--hhhhhhhccc----eEEEecC-
Confidence 876532 3445555555422 1233444555554 5667896 4 5799999865 9999543
Q ss_pred CCCchhhhccc
Q 005625 675 HPIPLNFLPSY 685 (687)
Q Consensus 675 ~gFGLviLEa~ 685 (687)
| +.|+.|+.
T Consensus 261 -G-~~Tv~E~~ 269 (365)
T 3s2u_A 261 -G-ALTVSELT 269 (365)
T ss_dssp -C-HHHHHHHH
T ss_pred -C-cchHHHHH
Confidence 3 56776764
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.98 E-value=2.9e-09 Score=115.33 Aligned_cols=218 Identities=11% Similarity=0.048 Sum_probs=122.7
Q ss_pred HHHHHHHHhcCCCceEEEeCCCC-hhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHh
Q 005625 395 DVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (687)
Q Consensus 395 ~~~~~L~~~~~~~PDLIH~Hys~-aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~ 473 (687)
.+.+.+.+ .+||+||+|... .++.+.++|+++|||++++.+++. + +.. ...|.. .. .-...-+
T Consensus 102 ~l~~~l~~---~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r-s-~~~-~~~~~~-----~~-----~r~~~~~ 165 (396)
T 3dzc_A 102 GMQQVLSS---EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR-T-GNI-YSPWPE-----EG-----NRKLTAA 165 (396)
T ss_dssp HHHHHHHH---HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-C-SCT-TSSTTH-----HH-----HHHHHHH
T ss_pred HHHHHHHh---cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-c-ccc-ccCCcH-----HH-----HHHHHHH
Confidence 44444433 689999999764 446778899999999887665541 1 100 001110 00 0112356
Q ss_pred cCCEEEecCHHHHhccccccccccccccccccccceeecccccCCCcceEeeC-CCCCCCCCCCChHHHhhhhhhhhhhh
Q 005625 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQ 552 (687)
Q Consensus 474 ~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpn-GVD~~~F~p~~~~~~r~~~l~~~i~~ 552 (687)
.||.++++|..... .+..+ ++...|+.+++| ++|...+.+.. ... ...++.++++
T Consensus 166 ~a~~~~~~se~~~~-------~l~~~---------------G~~~~ki~vvGn~~~d~~~~~~~~-~~~-~~~~~~~~r~ 221 (396)
T 3dzc_A 166 LTQYHFAPTDTSRA-------NLLQE---------------NYNAENIFVTGNTVIDALLAVREK-IHT-DMDLQATLES 221 (396)
T ss_dssp TCSEEEESSHHHHH-------HHHHT---------------TCCGGGEEECCCHHHHHHHHHHHH-HHH-CHHHHHHHHH
T ss_pred hcCEEECCCHHHHH-------HHHHc---------------CCCcCcEEEECCcHHHHHHHhhhh-ccc-chhhHHHHHH
Confidence 78999999865432 12111 222238999987 45532221110 000 0000111221
Q ss_pred hhcCCCcccccccCC-CCCCCCEEE-EEecCCc-CCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHH
Q 005625 553 LLFDPEQNDEHVGTL-SDRSKPIVF-SMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (687)
Q Consensus 553 ll~~~~~~~~~~g~l-~~~~kPiIl-~VGRLdp-~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~ 629 (687)
.+. .++++|+++ +.+|... .|++..+++|+.++.+..++.++++++|. + +..+ +.
T Consensus 222 ------------~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~-~------~~~~---~~ 279 (396)
T 3dzc_A 222 ------------QFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHL-N------PNVR---EP 279 (396)
T ss_dssp ------------TCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCB-C------HHHH---HH
T ss_pred ------------HhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCC-C------hHHH---HH
Confidence 122 234566655 4557543 58899999999988665566777765443 1 1112 22
Q ss_pred HHHHHHHcCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 630 L~~li~elgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++++ .+..++|+++++ ++..++..+|+.| |+||.+| | |++ +||.+
T Consensus 280 l~~~---~~~~~~v~~~~~-lg~~~~~~l~~~a----d~vv~~S--G-g~~-~EA~a 324 (396)
T 3dzc_A 280 VNKL---LKGVSNIVLIEP-QQYLPFVYLMDRA----HIILTDS--G-GIQ-EEAPS 324 (396)
T ss_dssp HHHH---TTTCTTEEEECC-CCHHHHHHHHHHC----SEEEESC--S-GGG-TTGGG
T ss_pred HHHH---HcCCCCEEEeCC-CCHHHHHHHHHhc----CEEEECC--c-cHH-HHHHH
Confidence 2222 355679999884 7777888999865 9999999 4 554 78864
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.70 E-value=3.9e-08 Score=106.90 Aligned_cols=207 Identities=14% Similarity=0.101 Sum_probs=120.3
Q ss_pred HHHHHHHHhcCCCceEEEeCCCC-hhHHHHHHHHcCCCcEEEEecCCccccCCCCchh--hhhhcccccccchhHHHHHH
Q 005625 395 DVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY--WKKFDEKYHFSCQFTADLIA 471 (687)
Q Consensus 395 ~~~~~L~~~~~~~PDLIH~Hys~-aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~--w~~~~~~y~~s~rf~aE~ia 471 (687)
.+.+.+.+ .+||+||+|... .++.+.++|+++|||+++...++ .+ + +.+ |.. . . ...+.
T Consensus 105 ~l~~~l~~---~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs-~---~~~~~~p~--~---~-----~r~~~ 166 (403)
T 3ot5_A 105 GINEVIAA---ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RT-W---NKYSPFPE--E---M-----NRQLT 166 (403)
T ss_dssp HHHHHHHH---HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CC-S---CTTSSTTH--H---H-----HHHHH
T ss_pred HHHHHHHH---cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-c---ccccCCcH--H---H-----HHHHH
Confidence 34444433 689999999763 45667888999999987665554 11 0 111 100 0 0 11223
Q ss_pred HhcCCEEEecCHHHHhccccccccccccccccccccceeecccccCCCcceEeeC-CCCCCCCCCCChHHHhhhhhhhhh
Q 005625 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSI 550 (687)
Q Consensus 472 m~~AD~IItsS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpn-GVD~~~F~p~~~~~~r~~~l~~~i 550 (687)
-+-+|.++++|..... .+..+ ++...|+.++.| ++|...+.+.... + .+.
T Consensus 167 ~~~a~~~~~~se~~~~-------~l~~~---------------Gi~~~~i~vvGn~~~D~~~~~~~~~~--~-----~~~ 217 (403)
T 3ot5_A 167 GVMADIHFSPTKQAKE-------NLLAE---------------GKDPATIFVTGNTAIDALKTTVQKDY--H-----HPI 217 (403)
T ss_dssp HHHCSEEEESSHHHHH-------HHHHT---------------TCCGGGEEECCCHHHHHHHHHSCTTC--C-----CHH
T ss_pred HHhcCEEECCCHHHHH-------HHHHc---------------CCCcccEEEeCCchHHHHHhhhhhhc--c-----hHH
Confidence 4568999998865432 12111 222238999987 5564332221100 0 001
Q ss_pred hhhhcCCCcccccccCCCCCCCC-EEEEEecCCc-CCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHH
Q 005625 551 EQLLFDPEQNDEHVGTLSDRSKP-IVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (687)
Q Consensus 551 ~~ll~~~~~~~~~~g~l~~~~kP-iIl~VGRLdp-~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~ 628 (687)
.+ . + +++| ++++.+|... .|++..+++|+.++.+..++.++++++|. + ...
T Consensus 218 ~~------------~-l--~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~-~------~~~----- 270 (403)
T 3ot5_A 218 LE------------N-L--GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHL-N------PAV----- 270 (403)
T ss_dssp HH------------S-C--TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCS-C------HHH-----
T ss_pred HH------------h-c--cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCC-C------HHH-----
Confidence 00 1 2 3344 4556778654 47899999999987665566777766443 1 111
Q ss_pred HHHHHHHH-cCCCCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 629 KMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 629 ~L~~li~e-lgL~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
.+.+++ ++..++|+++|+ ++..++..+|+.| |++|.+| | |++ +||.+
T Consensus 271 --~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~a----d~vv~~S--G-g~~-~EA~a 318 (403)
T 3ot5_A 271 --REKAMAILGGHERIHLIEP-LDAIDFHNFLRKS----YLVFTDS--G-GVQ-EEAPG 318 (403)
T ss_dssp --HHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHE----EEEEECC--H-HHH-HHGGG
T ss_pred --HHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhc----CEEEECC--c-cHH-HHHHH
Confidence 122222 355678999995 7778899999865 8999888 2 333 78764
No 33
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.67 E-value=6.1e-08 Score=103.23 Aligned_cols=82 Identities=9% Similarity=-0.072 Sum_probs=45.9
Q ss_pred CCCEEEEEecCCcCC----------CHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCC
Q 005625 571 SKPIVFSMARLDHVK----------NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (687)
Q Consensus 571 ~kPiIl~VGRLdp~K----------ni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~ 640 (687)
.+++++++|++...| .+..+++++.+. +.++++++|+.+ . +++. ++.
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~---------~---~~l~------~~~ 283 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL---------A---QTLQ------PLP 283 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------------------------CC
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc---------h---hhhc------cCC
Confidence 345777899997544 577788887653 467777766521 1 1121 357
Q ss_pred CcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 641 ~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++|++.|+ ++ ..+++.. +|+||..+ -+.+++||.+
T Consensus 284 ~~v~~~~~-~~---~~~ll~~----ad~~v~~g---G~~t~~Ea~~ 318 (398)
T 4fzr_A 284 EGVLAAGQ-FP---LSAIMPA----CDVVVHHG---GHGTTLTCLS 318 (398)
T ss_dssp TTEEEESC-CC---HHHHGGG----CSEEEECC---CHHHHHHHHH
T ss_pred CcEEEeCc-CC---HHHHHhh----CCEEEecC---CHHHHHHHHH
Confidence 89999996 54 6777775 39999543 3567788753
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.63 E-value=5.4e-07 Score=96.73 Aligned_cols=122 Identities=14% Similarity=0.246 Sum_probs=70.1
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++. .++|.+...+.++++|.+ +|| +|.++|.... ...++
T Consensus 8 ~kIl~~~~-------------~~~Gh~~p~~~la~~L~~--------~G~----~V~~~~~~~~-------~~~~~---- 51 (430)
T 2iyf_A 8 AHIAMFSI-------------AAHGHVNPSLEVIRELVA--------RGH----RVTYAIPPVF-------ADKVA---- 51 (430)
T ss_dssp CEEEEECC-------------SCHHHHGGGHHHHHHHHH--------TTC----EEEEEECGGG-------HHHHH----
T ss_pred ceEEEEeC-------------CCCccccchHHHHHHHHH--------CCC----eEEEEeCHHH-------HHHHH----
Confidence 69999863 247888888888988877 899 9999985310 11111
Q ss_pred CCCeEEEEecCCCCccccc--cccccccchhhHHHH---HHHHHHHHHHhc-CCCceEEEeCCCChhHHHHHHHHcCCCc
Q 005625 359 TEHTHILRVPFRSEKGILR--QWISRFDVWPYLETF---TEDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGIT 432 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~--~~isr~~iwp~Le~f---~~~~~~~L~~~~-~~~PDLIH~Hys~aglvA~llAr~lgVP 432 (687)
..|+.++.+|.....+... .+ + ..+...+..+ .......+.+.+ ..+||+||++.. +..+..+|+++|||
T Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~--~~~~~~~A~~~giP 127 (430)
T 2iyf_A 52 ATGPRPVLYHSTLPGPDADPEAW-G-STLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDIT--SYPARVLARRWGVP 127 (430)
T ss_dssp TTSCEEEECCCCSCCTTSCGGGG-C-SSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETT--CHHHHHHHHHHTCC
T ss_pred hCCCEEEEcCCcCcccccccccc-c-hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCc--cHHHHHHHHHcCCC
Confidence 1367777776532111100 00 0 0111111111 112222222222 468999999865 34677888999999
Q ss_pred EEEEecCC
Q 005625 433 QCTIAHAL 440 (687)
Q Consensus 433 ~V~T~HaL 440 (687)
.|.+.|+.
T Consensus 128 ~v~~~~~~ 135 (430)
T 2iyf_A 128 AVSLSPNL 135 (430)
T ss_dssp EEEEESSC
T ss_pred EEEEeccc
Confidence 99887754
No 35
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.63 E-value=1.1e-07 Score=101.29 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=69.3
Q ss_pred ccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccc
Q 005625 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (687)
Q Consensus 277 ~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i 356 (687)
++|||++++.- ++|.+.-++.++++|.+ +|| +|.|+|. +. ...++
T Consensus 19 ~~MrIl~~~~~-------------~~Ghv~~~~~La~~L~~--------~Gh----eV~v~~~---~~-----~~~~~-- 63 (398)
T 3oti_A 19 RHMRVLFVSSP-------------GIGHLFPLIQLAWGFRT--------AGH----DVLIAVA---EH-----ADRAA-- 63 (398)
T ss_dssp CCCEEEEECCS-------------SHHHHGGGHHHHHHHHH--------TTC----EEEEEES---SC-----HHHHH--
T ss_pred hcCEEEEEcCC-------------CcchHhHHHHHHHHHHH--------CCC----EEEEecc---ch-----HHHHH--
Confidence 44799999842 46777777888888877 899 9999986 11 11122
Q ss_pred cCCCCeEEEEecCCCCcc-cc------------------ccccccccchhh----HHHHHHHHHHHHHHhcCCCceEEEe
Q 005625 357 SGTEHTHILRVPFRSEKG-IL------------------RQWISRFDVWPY----LETFTEDVGSEITAELQGFPDFIIG 413 (687)
Q Consensus 357 ~~~~~v~IlRvP~~~~~~-~~------------------~~~isr~~iwp~----Le~f~~~~~~~L~~~~~~~PDLIH~ 413 (687)
..|+.++.++....-. .. .... ..+... .......+.+.+ + +.+||+||+
T Consensus 64 --~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l-~--~~~pDlVv~ 136 (398)
T 3oti_A 64 --AAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDL--EEWGVQIAAVNRPLVDGTMALV-D--DYRPDLVVY 136 (398)
T ss_dssp --TTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSCCCSG--GGGHHHHHHHHGGGHHHHHHHH-H--HHCCSEEEE
T ss_pred --hCCCeeEecCCccCHHHHhhhcccCCccccccccCChhhhH--HHHHHHHHHHHHHHHHHHHHHH-H--HcCCCEEEE
Confidence 1367777776431100 00 0000 000001 111122333333 2 258999998
Q ss_pred CCCChhHHHHHHHHcCCCcEEEEecCC
Q 005625 414 NYSDGNLVASLLAYKMGITQCTIAHAL 440 (687)
Q Consensus 414 Hys~aglvA~llAr~lgVP~V~T~HaL 440 (687)
+ ...+.|.++|+++|+|+|.+.|+.
T Consensus 137 d--~~~~~~~~aA~~~giP~v~~~~~~ 161 (398)
T 3oti_A 137 E--QGATVGLLAADRAGVPAVQRNQSA 161 (398)
T ss_dssp E--TTCHHHHHHHHHHTCCEEEECCTT
T ss_pred C--chhhHHHHHHHHcCCCEEEEeccC
Confidence 5 233457788899999999998875
No 36
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.62 E-value=6.1e-07 Score=94.58 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=70.7
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
+||++++.. +.|.+...+.++++|.+ +|| +|.++|.. . ....++.
T Consensus 5 ~~il~~~~~-------------~~Ghv~~~~~La~~L~~--------~Gh----eV~v~~~~--~-----~~~~~~~--- 49 (402)
T 3ia7_A 5 RHILFANVQ-------------GHGHVYPSLGLVSELAR--------RGH----RITYVTTP--L-----FADEVKA--- 49 (402)
T ss_dssp CEEEEECCS-------------SHHHHHHHHHHHHHHHH--------TTC----EEEEEECH--H-----HHHHHHH---
T ss_pred CEEEEEeCC-------------CCcccccHHHHHHHHHh--------CCC----EEEEEcCH--H-----HHHHHHH---
Confidence 499998843 36778888888888877 899 99999852 1 0111221
Q ss_pred CCCeEEEEecCCCCccc-cccccccccchhhHHH-H---HHHHHHHHHHhc-CCCceEEEeCCCChhHHHHHHHHcCCCc
Q 005625 359 TEHTHILRVPFRSEKGI-LRQWISRFDVWPYLET-F---TEDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGIT 432 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~-~~~~isr~~iwp~Le~-f---~~~~~~~L~~~~-~~~PDLIH~Hys~aglvA~llAr~lgVP 432 (687)
.|+.++.++......- ..... ....+..+.. + .......+.+.+ ..+||+||++. .....+.++|+++|||
T Consensus 50 -~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP 126 (402)
T 3ia7_A 50 -AGAEVVLYKSEFDTFHVPEVVK-QEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRP 126 (402)
T ss_dssp -TTCEEEECCCGGGTSSSSSSSC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCC
T ss_pred -cCCEEEeccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCC
Confidence 3677777764211000 00000 0011111111 1 111222222222 47999999973 2334577888999999
Q ss_pred EEEEecCCc
Q 005625 433 QCTIAHALE 441 (687)
Q Consensus 433 ~V~T~HaL~ 441 (687)
.|++.|++.
T Consensus 127 ~v~~~~~~~ 135 (402)
T 3ia7_A 127 AVRLTGGFA 135 (402)
T ss_dssp EEEEESSCC
T ss_pred EEEEecccc
Confidence 999888764
No 37
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.56 E-value=5.8e-07 Score=105.01 Aligned_cols=249 Identities=15% Similarity=0.054 Sum_probs=137.4
Q ss_pred CceEEEeCCCChhHHHH-HHHHc--------------CCCcEEEEecCCccccC---CCC--------------chhhhh
Q 005625 407 FPDFIIGNYSDGNLVAS-LLAYK--------------MGITQCTIAHALEKTKY---PDS--------------DIYWKK 454 (687)
Q Consensus 407 ~PDLIH~Hys~aglvA~-llAr~--------------lgVP~V~T~HaL~~~ky---~~s--------------~l~w~~ 454 (687)
+||+||+|.|.++++.. ++... .+.++++|.|++-..-. +.. .+.|.-
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999998887666 54322 24578999998743221 100 011100
Q ss_pred hc-------------c-cccccchhHHHHHHHhcCCEEEecCH--HHHhccccccccccccccccccccceeecccccCC
Q 005625 455 FD-------------E-KYHFSCQFTADLIAMNNADFIITSTY--QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (687)
Q Consensus 455 ~~-------------~-~y~~s~rf~aE~iam~~AD~IItsS~--qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~ 518 (687)
++ . ......++.+-..++..|+.|-++|. .++..+ .. .+++++. .+
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~-~~-----------f~~~~~~------~p 430 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKA-ET-----------LADWYAL------WP 430 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHH-TT-----------THHHHHH------CG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhh-hh-----------hhhHHHc------Cc
Confidence 00 0 00011134445688999999999984 333210 00 1133331 23
Q ss_pred CcceEeeCCCCCCCC----CCCChHH------------------------------HhhhhhhhhhhhhhcCCCcccccc
Q 005625 519 PKFNIVSPGADMDIY----FPYSEKQ------------------------------KRLTALHGSIEQLLFDPEQNDEHV 564 (687)
Q Consensus 519 pK~~VIpnGVD~~~F----~p~~~~~------------------------------~r~~~l~~~i~~ll~~~~~~~~~~ 564 (687)
.|++-|-||||..+| .|..++- +++.+.+.+-+..|.. --++..
T Consensus 431 ~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~--~l~~~~ 508 (796)
T 2c4m_A 431 EKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAE--WILERQ 508 (796)
T ss_dssp GGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHH--HHHHHH
T ss_pred cccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHH--HHHHHh
Confidence 489999999999999 3431100 0000000000000000 001223
Q ss_pred cCCCCCCCCEEEEEecCCcCCCHHH-HHHHHhhccccCC------CceEEEEEccCCCCCCCChHHHHHHHHHHHHHH--
Q 005625 565 GTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRE------LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-- 635 (687)
Q Consensus 565 g~l~~~~kPiIl~VGRLdp~Kni~~-LVeAfa~l~~l~~------~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~-- 635 (687)
|...+|+.|++.++.||+..|+.+. ++..+.+..++.. ...-+|+||...+ .+...+..|..+..+++
T Consensus 509 Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P---~y~~aK~iIk~i~~va~~i 585 (796)
T 2c4m_A 509 GIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAP---GYVRAKAIIKLINSIADLV 585 (796)
T ss_dssp CCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCT---TCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCH---hHHHHHHHHHHHHHHHHHh
Confidence 5556889999999999999999999 7888766543211 1223445665432 23444445555555554
Q ss_pred --HcCCCC--cEEEc-CcccCcccHHHHHHHhhcCCcEEEEcCC--C-CCchhhhcc
Q 005625 636 --TYKLDG--QFRWI-AAQTNRARNGELYRYIADTKGAFVQVYV--H-PIPLNFLPS 684 (687)
Q Consensus 636 --elgL~~--~V~fl-G~~l~~~dl~elYr~aad~~dVFVlPSl--~-gFGLviLEa 684 (687)
.-.+.+ +|.|+ ++ + ..+.+. +..++|++.+||+ + ++|..-+.|
T Consensus 586 n~dp~~~~~lKVvFl~nY--~-vslA~~---I~~gaDv~l~~S~a~~EAsGTs~MKa 636 (796)
T 2c4m_A 586 NNDPEVSPLLKVVFVENY--N-VSPAEH---ILPASDVSEQISTAGKEASGTSNMKF 636 (796)
T ss_dssp HTCTTTTTTEEEEEETTC--C-HHHHHH---HGGGCSEEEECCCTTSCSCCHHHHHH
T ss_pred ccccccCCceEEEEECCC--C-HHHHHH---HhhhcceeecCCCCCCCCCchHHHHH
Confidence 224678 88886 44 2 223332 2234699999999 7 999876544
No 38
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.55 E-value=4.6e-08 Score=103.58 Aligned_cols=85 Identities=9% Similarity=-0.024 Sum_probs=53.8
Q ss_pred CCEEEEEecCCcCCCH-HHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCccc
Q 005625 572 KPIVFSMARLDHVKNM-TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (687)
Q Consensus 572 kPiIl~VGRLdp~Kni-~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l 650 (687)
+.+++++|++...|+. ..+++++.+. ...++.++++++|+.+ . +.+. ++.++|++.|+ +
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~---------~---~~l~------~~~~~v~~~~~-~ 278 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH---------R---ALLT------DLPDNARIAES-V 278 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG---------G---GGCT------TCCTTEEECCS-C
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc---------h---hhcc------cCCCCEEEecc-C
Confidence 3567778999876655 7777777665 4444678888776521 1 1111 45789999996 6
Q ss_pred CcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 651 NRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 651 ~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
+.. +++.. +|+||..+ -+.+++||..
T Consensus 279 ~~~---~ll~~----ad~~v~~~---G~~t~~Ea~~ 304 (391)
T 3tsa_A 279 PLN---LFLRT----CELVICAG---GSGTAFTATR 304 (391)
T ss_dssp CGG---GTGGG----CSEEEECC---CHHHHHHHHH
T ss_pred CHH---HHHhh----CCEEEeCC---CHHHHHHHHH
Confidence 643 34432 49999544 3357777753
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.49 E-value=3.6e-06 Score=89.66 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=72.8
Q ss_pred cCCCcchHhHHhcCCCccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecc
Q 005625 261 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (687)
Q Consensus 261 ~~p~~~~le~f~~r~p~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ 340 (687)
.+|++..-|. ..+|||++++.- +.|.+.-.+.++++|.+ +|| +|.++|..
T Consensus 8 ~~~~~~~~~~-----~~m~rIl~~~~~-------------~~GHv~p~l~La~~L~~--------~Gh----~V~v~~~~ 57 (415)
T 3rsc_A 8 HHHSSGHIEG-----RHMAHLLIVNVA-------------SHGLILPTLTVVTELVR--------RGH----RVSYVTAG 57 (415)
T ss_dssp ----------------CCCEEEEECCS-------------CHHHHGGGHHHHHHHHH--------TTC----EEEEEECG
T ss_pred cccccCCcCc-----ccCCEEEEEeCC-------------CccccccHHHHHHHHHH--------CCC----EEEEEeCH
Confidence 4566666664 445799999842 47888888888888877 899 99999842
Q ss_pred CCCCCCCccccccccccCCCCeEEEEecCCCCcccc--ccccccccchhhHHH-H---HHHHHHHHHHhc-CCCceEEEe
Q 005625 341 IPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGIL--RQWISRFDVWPYLET-F---TEDVGSEITAEL-QGFPDFIIG 413 (687)
Q Consensus 341 ip~~~g~~~~q~lE~i~~~~~v~IlRvP~~~~~~~~--~~~isr~~iwp~Le~-f---~~~~~~~L~~~~-~~~PDLIH~ 413 (687)
.. ...++. .|+.++.++......-. ..+. ...+..+.. + .......+.+.+ ..+||+||+
T Consensus 58 --~~-----~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~ 124 (415)
T 3rsc_A 58 --GF-----AEPVRA----AGATVVPYQSEIIDADAAEVFGS--DDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLY 124 (415)
T ss_dssp --GG-----HHHHHH----TTCEEEECCCSTTTCCHHHHHHS--SSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEE
T ss_pred --HH-----HHHHHh----cCCEEEeccccccccccchhhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 11 112221 36777777653211000 0000 011111111 1 111222222222 478999997
Q ss_pred CCCChhHHHHHHHHcCCCcEEEEecCCc
Q 005625 414 NYSDGNLVASLLAYKMGITQCTIAHALE 441 (687)
Q Consensus 414 Hys~aglvA~llAr~lgVP~V~T~HaL~ 441 (687)
+. .....+.++|+++|||.|.+.|++.
T Consensus 125 d~-~~~~~~~~aA~~~giP~v~~~~~~~ 151 (415)
T 3rsc_A 125 DD-FPFIAGQLLAARWRRPAVRLSAAFA 151 (415)
T ss_dssp ES-TTHHHHHHHHHHTTCCEEEEESSCC
T ss_pred Cc-hhhhHHHHHHHHhCCCEEEEEeccc
Confidence 62 2344577889999999999988764
No 40
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.44 E-value=1.1e-06 Score=102.72 Aligned_cols=112 Identities=9% Similarity=0.029 Sum_probs=71.1
Q ss_pred ccCCCCCCCCEEEEEecCCcCCCHHH-HHHHHhhccccCC------CceEEEEEccCCCCCCCChHHHHHHHHHHHHHH-
Q 005625 564 VGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRE------LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK- 635 (687)
Q Consensus 564 ~g~l~~~~kPiIl~VGRLdp~Kni~~-LVeAfa~l~~l~~------~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~- 635 (687)
.|...+|+.|++.++.||+..|+.+. ++..+.+..++.. ...-+|+||...+ .+...+..|..+.++++
T Consensus 518 ~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P---~y~~aK~iIk~i~~va~~ 594 (796)
T 1l5w_A 518 TGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP---GYYLAKNIIFAINKVADV 594 (796)
T ss_dssp HCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT---TCHHHHHHHHHHHHHHHH
T ss_pred hCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCCh---hHHHHHHHHHHHHHHHHH
Confidence 35566889999999999999999999 7887766543211 1223445665432 23444445555555554
Q ss_pred ---HcCCCC--cEEEc-CcccCcccHHHHHHHhhcCCcEEEEcCC--C-CCchhhhcc
Q 005625 636 ---TYKLDG--QFRWI-AAQTNRARNGELYRYIADTKGAFVQVYV--H-PIPLNFLPS 684 (687)
Q Consensus 636 ---elgL~~--~V~fl-G~~l~~~dl~elYr~aad~~dVFVlPSl--~-gFGLviLEa 684 (687)
.-.+.+ +|.|+ ++ + ..+.+. +..++|++.+||+ + ++|..-+.|
T Consensus 595 in~Dp~~~~~lKVvfl~nY--~-vslA~~---I~~gaDv~l~~S~a~~EAsGTs~MKa 646 (796)
T 1l5w_A 595 INNDPLVGDKLKVVFLPDY--C-VSAAEK---LIPAADISEQISTAGKEASGTGNMKL 646 (796)
T ss_dssp HHTCTTTGGGEEEEECSSC--C-HHHHHH---HGGGCSEEEECCCTTTCCCCSHHHHH
T ss_pred hccccccCCceEEEEECCC--C-HHHHHH---HhhhcceeecCCCCCCCCCchHHHHH
Confidence 224678 88886 44 3 223332 2234699999999 7 999876544
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.38 E-value=3.8e-06 Score=88.73 Aligned_cols=80 Identities=15% Similarity=-0.006 Sum_probs=52.4
Q ss_pred CCEEEEEecCCcC-------CCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 005625 572 KPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (687)
Q Consensus 572 kPiIl~VGRLdp~-------Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~ 644 (687)
..+++++|++.+. |.+..+++|+.+. +.++++++|+. + .+++. ++.++|+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~---------~---~~~l~------~~~~~v~ 267 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDT---------V---AEALR------AEVPQAR 267 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHH---------H---HHHHH------HHCTTSE
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCC---------C---HHhhC------CCCCceE
Confidence 3478899999875 6788899998753 46777766531 1 12222 2367899
Q ss_pred EcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 645 WIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 645 flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
+ |+ ++ ..+++.. +|+||..+ -+.+++||.+
T Consensus 268 ~-~~-~~---~~~~l~~----~d~~v~~~---G~~t~~Ea~~ 297 (384)
T 2p6p_A 268 V-GW-TP---LDVVAPT----CDLLVHHA---GGVSTLTGLS 297 (384)
T ss_dssp E-EC-CC---HHHHGGG----CSEEEECS---CTTHHHHHHH
T ss_pred E-cC-CC---HHHHHhh----CCEEEeCC---cHHHHHHHHH
Confidence 9 96 65 4567753 49999754 2457788753
No 42
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.36 E-value=1.6e-06 Score=101.63 Aligned_cols=111 Identities=5% Similarity=-0.023 Sum_probs=72.8
Q ss_pred ccCCCCCCCCEEEEEecCCcCCCHHHH-HHHHhhcccc--CC-----CceEEEEEccCCCCCCCChHHHHHHHHHHHHHH
Q 005625 564 VGTLSDRSKPIVFSMARLDHVKNMTGL-VECYGKNSQL--RE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (687)
Q Consensus 564 ~g~l~~~~kPiIl~VGRLdp~Kni~~L-VeAfa~l~~l--~~-----~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~ 635 (687)
.|...+|+.|++.++.||+..|+.+.+ +..+.++.++ .+ ...+ |+||... +.+...+..|..+.++++
T Consensus 542 ~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~-If~GKA~---P~y~~aK~iIkli~~va~ 617 (824)
T 2gj4_A 542 YKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTV-MIGGKAA---PGYHMAKMIIKLITAIGD 617 (824)
T ss_dssp HCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEE-EEECCCC---TTCHHHHHHHHHHHHHHH
T ss_pred hCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEE-EEEEeCC---HhHHHHHHHHHHHHHHHH
Confidence 455668899999999999999999998 7776655321 11 2234 4555533 234455556666777777
Q ss_pred Hc----CCCC--cEEEc-CcccCcccHHHHHHHhhcCCcEEEEcCC--C-CCchhhhcc
Q 005625 636 TY----KLDG--QFRWI-AAQTNRARNGELYRYIADTKGAFVQVYV--H-PIPLNFLPS 684 (687)
Q Consensus 636 el----gL~~--~V~fl-G~~l~~~dl~elYr~aad~~dVFVlPSl--~-gFGLviLEa 684 (687)
.+ .+.+ +|.|+ ++ + ..+.+. +..++|++.+||+ + ++|..-+.|
T Consensus 618 ~in~Dp~v~~~lKVvFl~nY--d-vslA~~---I~~gaDv~l~~S~ag~EAsGTs~MKa 670 (824)
T 2gj4_A 618 VVNHDPVVGDRLRVIFLENY--R-VSLAEK---VIPAADLSEQISTAGTEASGTGNMKF 670 (824)
T ss_dssp HHTTCTTTGGGEEEEEETTC--C-HHHHHH---HGGGCSEEEECCCTTSCSCCSHHHHH
T ss_pred HhccCcccCCceEEEEECCC--C-HHHHHH---HhhhcceeecCCCCCCCCCchHHHHH
Confidence 65 3577 88886 54 2 223332 2334699999999 7 999876544
No 43
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.17 E-value=2.2e-05 Score=84.36 Aligned_cols=126 Identities=12% Similarity=0.040 Sum_probs=71.9
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++. .+.|.+.-++.++++|.+ +|| +|.++|.. +. ...++
T Consensus 1 MrIli~~~-------------gt~Ghv~p~~~La~~L~~--------~Gh----~V~v~~~~--~~-----~~~v~---- 44 (404)
T 3h4t_A 1 MGVLITGC-------------GSRGDTEPLVALAARLRE--------LGA----DARMCLPP--DY-----VERCA---- 44 (404)
T ss_dssp -CEEEEEE-------------SSHHHHHHHHHHHHHHHH--------TTC----CEEEEECG--GG-----HHHHH----
T ss_pred CeEEEEeC-------------CCCccHHHHHHHHHHHHH--------CCC----eEEEEeCH--HH-----HHHHH----
Confidence 58999884 246888888888888877 899 99999853 11 11111
Q ss_pred CCCeEEEEecCCCCccccccccccccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCC-ChhHHHHHHHHcCCCcEEEEe
Q 005625 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIA 437 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys-~aglvA~llAr~lgVP~V~T~ 437 (687)
..|+..+.++......-.....+...+...+........+.+.+.. .+||+||.+.. ..+..|.++|+++|||++.+.
T Consensus 45 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~ 123 (404)
T 3h4t_A 45 EVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTV 123 (404)
T ss_dssp HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEE
Confidence 1255666665432200000000011222233333333333333322 37999987643 445556888999999999999
Q ss_pred cCCc
Q 005625 438 HALE 441 (687)
Q Consensus 438 HaL~ 441 (687)
|...
T Consensus 124 ~~p~ 127 (404)
T 3h4t_A 124 LSPD 127 (404)
T ss_dssp SSGG
T ss_pred cCCc
Confidence 8753
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.09 E-value=8.4e-06 Score=88.23 Aligned_cols=199 Identities=10% Similarity=-0.025 Sum_probs=108.9
Q ss_pred CCceEEEeCCCChhHHHHHHHHcCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEecCHHH
Q 005625 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IItsS~qE 485 (687)
.+||+|++|.......|+++|+++|||+++...++ .+ + +.++.+ .. .....-.-||.++++|...
T Consensus 93 ~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs-~---~~~~pe-----e~-----nR~~~~~~a~~~~~~te~~ 157 (385)
T 4hwg_A 93 EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC-F---DQRVPE-----EI-----NRKIIDHISDVNITLTEHA 157 (385)
T ss_dssp HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC-S---CTTSTH-----HH-----HHHHHHHHCSEEEESSHHH
T ss_pred cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc-c---cccCcH-----HH-----HHHHHHhhhceeecCCHHH
Confidence 68999999965433334788999999987666655 11 1 101110 00 0122345689999988654
Q ss_pred HhccccccccccccccccccccceeecccccCCCcceEeeC-CCCCCCCCCCChHHHhhhhhhhhhhhhhcCCCcccccc
Q 005625 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (687)
Q Consensus 486 i~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpn-GVD~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~~~~~~ 564 (687)
.. .+... ++...|+.++.| ++|.-.+.. ....+ .++++.
T Consensus 158 ~~-------~l~~~---------------G~~~~~I~vtGnp~~D~~~~~~--~~~~~-----~~~~~~----------- 197 (385)
T 4hwg_A 158 RR-------YLIAE---------------GLPAELTFKSGSHMPEVLDRFM--PKILK-----SDILDK----------- 197 (385)
T ss_dssp HH-------HHHHT---------------TCCGGGEEECCCSHHHHHHHHH--HHHHH-----CCHHHH-----------
T ss_pred HH-------HHHHc---------------CCCcCcEEEECCchHHHHHHhh--hhcch-----hHHHHH-----------
Confidence 32 12110 222238888876 345211100 00010 112111
Q ss_pred cCCCCCCCCEEEEEecC---CcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHc-C-C
Q 005625 565 GTLSDRSKPIVFSMARL---DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-K-L 639 (687)
Q Consensus 565 g~l~~~~kPiIl~VGRL---dp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~el-g-L 639 (687)
+..++++.++++.+|. +..|++..+++|+.++.... +..+++..+. ++.+.++++ | +
T Consensus 198 -lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p----------------~~~~~l~~~~~~~ 259 (385)
T 4hwg_A 198 -LSLTPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHP----------------RTKKRLEDLEGFK 259 (385)
T ss_dssp -TTCCTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECH----------------HHHHHHHTSGGGG
T ss_pred -cCCCcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECCh----------------HHHHHHHHHHHHh
Confidence 1223333345556664 34588999999998775422 4555544321 123445555 4 3
Q ss_pred --CCcEEEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 640 --DGQFRWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 640 --~~~V~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
.++|++++ .++..++..+|+.| |++|.+| |.+.+||.+
T Consensus 260 ~~~~~v~l~~-~lg~~~~~~l~~~a----dlvvt~S----Ggv~~EA~a 299 (385)
T 4hwg_A 260 ELGDKIRFLP-AFSFTDYVKLQMNA----FCILSDS----GTITEEASI 299 (385)
T ss_dssp GTGGGEEECC-CCCHHHHHHHHHHC----SEEEECC----TTHHHHHHH
T ss_pred cCCCCEEEEc-CCCHHHHHHHHHhC----cEEEECC----ccHHHHHHH
Confidence 46899988 46666788888754 8999776 445678753
No 45
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.89 E-value=6.6e-05 Score=80.06 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=93.2
Q ss_pred CCceEEEeCCCC--hh-HHHHHHHH--cCCCcEEEEecCCccccCCCCchhhhhhcccccccchhHHHHHHHhcCCEEEe
Q 005625 406 GFPDFIIGNYSD--GN-LVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (687)
Q Consensus 406 ~~PDLIH~Hys~--ag-lvA~llAr--~lgVP~V~T~HaL~~~ky~~s~l~w~~~~~~y~~s~rf~aE~iam~~AD~IIt 480 (687)
.++|+|+.++.. +. +.+.++++ +.|+|+|+.+|++....+.. ..+ ....|...++.||.||+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~---------~~~----~~~~E~~~y~~aD~Ii~ 139 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSG---------NFY----LMDRTIAYYNKADVVVA 139 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGG---------GGG----GHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCcc---------chh----hHHHHHHHHHHCCEEEE
Confidence 579999987653 22 33555555 45999999999986432210 011 11258899999999999
Q ss_pred cCHHHHhccccccccccccccccccccceeecccccCCCcceEeeCCC-CCCCCCCCChHHHhhhhhhhhhhhhhcCCCc
Q 005625 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (687)
Q Consensus 481 sS~qEi~~~~~~v~qyes~~~f~lp~Lyrvv~gi~v~~pK~~VIpnGV-D~~~F~p~~~~~~r~~~l~~~i~~ll~~~~~ 559 (687)
.|..... ....+ |+ ...|+ ++.++ |.. .+.. .
T Consensus 140 ~S~~~~~-------~l~~~-------------G~--~~~ki--~~~~~~~~~--~~~~------------~--------- 172 (339)
T 3rhz_A 140 PSQKMID-------KLRDF-------------GM--NVSKT--VVQGMWDHP--TQAP------------M--------- 172 (339)
T ss_dssp SCHHHHH-------HHHHT-------------TC--CCSEE--EECCSCCCC--CCCC------------C---------
T ss_pred CCHHHHH-------HHHHc-------------CC--CcCce--eecCCCCcc--Cccc------------c---------
Confidence 9975433 11111 21 11244 44443 211 0100 0
Q ss_pred ccccccCCCCCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 005625 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (687)
Q Consensus 560 ~~~~~g~l~~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL 639 (687)
....+++.|+|+||+.....+ ..+.++.+++|+|.+.. + .+
T Consensus 173 -------~~~~~~~~i~yaG~l~k~~~L----------~~l~~~~~f~ivG~G~~---------~-------------~l 213 (339)
T 3rhz_A 173 -------FPAGLKREIHFPGNPERFSFV----------KEWKYDIPLKVYTWQNV---------E-------------LP 213 (339)
T ss_dssp -------CCCEEEEEEEECSCTTTCGGG----------GGCCCSSCEEEEESCCC---------C-------------CC
T ss_pred -------cccCCCcEEEEeCCcchhhHH----------HhCCCCCeEEEEeCCcc---------c-------------Cc
Confidence 012245789999999953221 12236789999996532 0 24
Q ss_pred CCcEEEcCcccCcccHHHHHHH
Q 005625 640 DGQFRWIAAQTNRARNGELYRY 661 (687)
Q Consensus 640 ~~~V~flG~~l~~~dl~elYr~ 661 (687)
. +|.|+|+ +++++++.+|+.
T Consensus 214 ~-nV~f~G~-~~~~el~~~l~~ 233 (339)
T 3rhz_A 214 Q-NVHKINY-RPDEQLLMEMSQ 233 (339)
T ss_dssp T-TEEEEEC-CCHHHHHHHHHT
T ss_pred C-CEEEeCC-CCHHHHHHHHHh
Confidence 5 8999995 899999999964
No 46
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=95.92 E-value=0.0059 Score=70.11 Aligned_cols=98 Identities=6% Similarity=-0.099 Sum_probs=70.6
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEE-EccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCccc
Q 005625 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (687)
Q Consensus 572 kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLV-GG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l 650 (687)
..++.+..|+ .|..+.++++|+++.+..+...|++. .|... +.....+ +.+.+.|+.++|+|+| .+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g~~~~~~----~~~~~~GI~~Rv~F~g-~~ 507 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------GITHPYV----ERFIKSYLGDSATAHP-HS 507 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------GGGHHHH----HHHHHHHHGGGEEEEC-CC
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------hhhHHHH----HHHHHcCCCccEEEcC-CC
Confidence 4567777774 78999999999988766666655432 23211 2222222 2345678989999999 58
Q ss_pred CcccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 651 NRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 651 ~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++.+....|+.+ |+|+-|+.++.|.|.+||+.
T Consensus 508 p~~e~la~y~~a----DIfLDpfpy~GgtTtlEALw 539 (631)
T 3q3e_A 508 PYHQYLRILHNC----DMMVNPFPFGNTNGIIDMVT 539 (631)
T ss_dssp CHHHHHHHHHTC----SEEECCSSSCCSHHHHHHHH
T ss_pred CHHHHHHHHhcC----cEEEeCCcccCChHHHHHHH
Confidence 888888888864 99999998844999999974
No 47
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=95.50 E-value=0.039 Score=58.84 Aligned_cols=123 Identities=12% Similarity=0.029 Sum_probs=69.3
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++.. ++|.+.-.+.++++|.+ +|| +|.++|... ....++.
T Consensus 1 MrIl~~~~~-------------~~GH~~p~l~la~~L~~--------~Gh----~V~~~~~~~-------~~~~v~~--- 45 (416)
T 1rrv_A 1 MRVLLSVCG-------------TRGDVEIGVALADRLKA--------LGV----QTRMCAPPA-------AEERLAE--- 45 (416)
T ss_dssp CEEEEEEES-------------CHHHHHHHHHHHHHHHH--------TTC----EEEEEECGG-------GHHHHHH---
T ss_pred CeEEEEecC-------------CCccHHHHHHHHHHHHH--------CCC----eEEEEeCHH-------HHHHHHH---
Confidence 589998632 58888888888888877 899 999998531 0111111
Q ss_pred CCCeEEEEecCCCCccccccccc-cc--cchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHH--HHHHHHcCCCcE
Q 005625 359 TEHTHILRVPFRSEKGILRQWIS-RF--DVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLV--ASLLAYKMGITQ 433 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~~~is-r~--~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglv--A~llAr~lgVP~ 433 (687)
.|+..+.++.... +..+.+.. .. .+...+........+.+.+ ...+||+|++.. ..... +..+|+++|||.
T Consensus 46 -~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~pD~vi~d~-~~~~~~~~~~~A~~~giP~ 121 (416)
T 1rrv_A 46 -VGVPHVPVGLPQH-MMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPG-AAEGCAAVVAVG-DLAAATGVRSVAEKLGLPF 121 (416)
T ss_dssp -HTCCEEECSCCGG-GCCCTTSCCCCHHHHHHHHHHHHHHHHHHHHH-HTTTCSEEEEEE-CHHHHHHHHHHHHHHTCCE
T ss_pred -cCCeeeecCCCHH-HHHhhccccchhHHHHHHHHHHHHHHHHHHHH-HhcCCCEEEEcC-chHHHHHHHHHHHHcCCCE
Confidence 2566666665421 11111000 00 0111111122233333332 246899998764 23334 677899999999
Q ss_pred EEEecCC
Q 005625 434 CTIAHAL 440 (687)
Q Consensus 434 V~T~HaL 440 (687)
|...++.
T Consensus 122 v~~~~~~ 128 (416)
T 1rrv_A 122 FYSVPSP 128 (416)
T ss_dssp EEEESSG
T ss_pred EEEeCCC
Confidence 9776653
No 48
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=95.22 E-value=0.052 Score=58.45 Aligned_cols=82 Identities=10% Similarity=0.077 Sum_probs=49.7
Q ss_pred CCCC-EEEEEecCCc-----CCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 005625 570 RSKP-IVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (687)
Q Consensus 570 ~~kP-iIl~VGRLdp-----~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V 643 (687)
+++| +++++|++.. .|++..+++|++.+ +.++++++|+.+ . +++ + ++.++|
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~------~------~~l----~--~~~~~v 321 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQ------L------EGV----A--NIPDNV 321 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTT------T------SSC----S--SCCSSE
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcc------h------hhh----c--cCCCCE
Confidence 3444 7788999875 48999999999753 367776665422 0 111 0 457899
Q ss_pred EEcCcccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 644 RWIAAQTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 644 ~flG~~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
++.|+ ++. .++|.. +|+||..+ | +.+++||.
T Consensus 322 ~~~~~-~~~---~~ll~~----ad~~V~~~--G-~~t~~Ea~ 352 (441)
T 2yjn_A 322 RTVGF-VPM---HALLPT----CAATVHHG--G-PGSWHTAA 352 (441)
T ss_dssp EECCS-CCH---HHHGGG----CSEEEECC--C-HHHHHHHH
T ss_pred EEecC-CCH---HHHHhh----CCEEEECC--C-HHHHHHHH
Confidence 99996 663 456653 49999632 3 45777775
No 49
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=95.15 E-value=0.095 Score=55.80 Aligned_cols=123 Identities=14% Similarity=0.076 Sum_probs=68.9
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++.. +.|.+.-.+.++++|.+ +|| +|.++|... . ...++.
T Consensus 13 ~~Il~~~~~-------------~~GHv~p~l~la~~L~~--------~Gh----~V~~~~~~~--~-----~~~~~~--- 57 (424)
T 2iya_A 13 RHISFFNIP-------------GHGHVNPSLGIVQELVA--------RGH----RVSYAITDE--F-----AAQVKA--- 57 (424)
T ss_dssp CEEEEECCS-------------CHHHHHHHHHHHHHHHH--------TTC----EEEEEECGG--G-----HHHHHH---
T ss_pred ceEEEEeCC-------------CCcccchHHHHHHHHHH--------CCC----eEEEEeCHH--H-----HHHHHh---
Confidence 589998743 46888888988888877 899 999998531 0 111221
Q ss_pred CCCeEEEEecCCCCccccc-cccccccchhhHHHHH---HHHHHHHHHhc-CCCceEEEeCCCChhHHHHHHHHcCCCcE
Q 005625 359 TEHTHILRVPFRSEKGILR-QWISRFDVWPYLETFT---EDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~-~~isr~~iwp~Le~f~---~~~~~~L~~~~-~~~PDLIH~Hys~aglvA~llAr~lgVP~ 433 (687)
.|+.++.+|..-..+... .-.+ .++...+..|. ......+.+.+ ..+||+|++.... ..|..+|+++|||.
T Consensus 58 -~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~--~~~~~~A~~lgIP~ 133 (424)
T 2iya_A 58 -AGATPVVYDSILPKESNPEESWP-EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIAS--WPAPVLGRKWDIPF 133 (424)
T ss_dssp -HTCEEEECCCCSCCTTCTTCCCC-SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTC--THHHHHHHHHTCCE
T ss_pred -CCCEEEecCccccccccchhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcc--cHHHHHHHhcCCCE
Confidence 256666666431111000 0000 01111111121 12222333322 4689999987643 24677788899999
Q ss_pred EEEecCC
Q 005625 434 CTIAHAL 440 (687)
Q Consensus 434 V~T~HaL 440 (687)
|...++.
T Consensus 134 v~~~~~~ 140 (424)
T 2iya_A 134 VQLSPTF 140 (424)
T ss_dssp EEEESSC
T ss_pred EEEeccc
Confidence 8876543
No 50
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=95.12 E-value=0.084 Score=56.33 Aligned_cols=122 Identities=14% Similarity=0.084 Sum_probs=67.4
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccccC
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~~ 358 (687)
|||++++. .++|.+.-.+.++++|.+ +|| +|.++|... ....++
T Consensus 1 M~Il~~~~-------------~~~GHv~P~l~la~~L~~--------~Gh----~V~~~~~~~-------~~~~v~---- 44 (415)
T 1iir_A 1 MRVLLATC-------------GSRGDTEPLVALAVRVRD--------LGA----DVRMCAPPD-------CAERLA---- 44 (415)
T ss_dssp CEEEEECC-------------SCHHHHHHHHHHHHHHHH--------TTC----EEEEEECGG-------GHHHHH----
T ss_pred CeEEEEcC-------------CCchhHHHHHHHHHHHHH--------CCC----eEEEEcCHH-------HHHHHH----
Confidence 58888852 257888889988888877 899 999998531 011111
Q ss_pred CCCeEEEEecCCCCccccccccc--cccchhhHHHHHHHHHHHHHHhcCCCceEEEeCCCChhHH--HHHHHHcCCCcEE
Q 005625 359 TEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLV--ASLLAYKMGITQC 434 (687)
Q Consensus 359 ~~~v~IlRvP~~~~~~~~~~~is--r~~iwp~Le~f~~~~~~~L~~~~~~~PDLIH~Hys~aglv--A~llAr~lgVP~V 434 (687)
..|+.++.+|..... .+...-. +..+...+........+.+.+ ...+||+|++... .... +..+|+++|||.|
T Consensus 45 ~~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~pD~vi~d~~-~~~~~~~~~~A~~lgiP~v 121 (415)
T 1iir_A 45 EVGVPHVPVGPSARA-PIQRAKPLTAEDVRRFTTEAIATQFDEIPA-AAEGCAAVVTTGL-LAAAIGVRSVAEKLGIPYF 121 (415)
T ss_dssp HTTCCEEECCC--------CCSCCCHHHHHHHHHHHHHHHHHHHHH-HTTTCSEEEEESC-HHHHHHHHHHHHHHTCCEE
T ss_pred HcCCeeeeCCCCHHH-HhhcccccchHHHHHHHHHHHHHHHHHHHH-HhcCCCEEEECCh-hHhHhhHHHHHHHhCCCEE
Confidence 125666666654211 1111000 000111111111223333332 1468999997653 3445 6788999999998
Q ss_pred EEecC
Q 005625 435 TIAHA 439 (687)
Q Consensus 435 ~T~Ha 439 (687)
...++
T Consensus 122 ~~~~~ 126 (415)
T 1iir_A 122 YAFHC 126 (415)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 87664
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=94.75 E-value=0.039 Score=57.81 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=24.8
Q ss_pred CCceEEEeCCCChhHHHHHHHHcCCCcEEEEecCC
Q 005625 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~HaL 440 (687)
.+||+|++..... .+.++|+++|+|.+...++.
T Consensus 127 ~~pD~Vv~d~~~~--~~~~~A~~~gip~~~~~~~~ 159 (400)
T 4amg_A 127 WRPDLVVHTPTQG--AGPLTAAALQLPCVELPLGP 159 (400)
T ss_dssp HCCSEEEECTTCT--HHHHHHHHTTCCEEECCSST
T ss_pred cCCCEEEECcchH--HHHHHHHHcCCCceeecccc
Confidence 5899999885432 35677889999998766653
No 52
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=90.91 E-value=0.13 Score=47.83 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=52.7
Q ss_pred CCEEEEEecCC---cCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCc
Q 005625 572 KPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (687)
Q Consensus 572 kPiIl~VGRLd---p~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~ 648 (687)
..+++++|++. +.|++..+++|+.++ ..++++++|+.. . -++.++|++.|+
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~------~---------------~~~~~~v~~~~~ 75 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNK------P---------------DTLGLNTRLYKW 75 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSC------C---------------TTCCTTEEEESS
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcC------c---------------ccCCCcEEEecC
Confidence 45788899995 788999999999653 256777665422 0 035678999996
Q ss_pred ccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 649 QTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 649 ~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
++.. +++.+ ..+|+||..+ -+.+++||.
T Consensus 76 -~~~~---~~l~~--~~ad~~I~~~---G~~t~~Ea~ 103 (170)
T 2o6l_A 76 -IPQN---DLLGH--PKTRAFITHG---GANGIYEAI 103 (170)
T ss_dssp -CCHH---HHHTS--TTEEEEEECC---CHHHHHHHH
T ss_pred -CCHH---HHhcC--CCcCEEEEcC---CccHHHHHH
Confidence 7643 44422 1349999632 357777775
No 53
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=83.14 E-value=8.1 Score=42.18 Aligned_cols=124 Identities=13% Similarity=0.085 Sum_probs=66.0
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCccccccccc--
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 356 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i-- 356 (687)
++|++++.- ..|.+.-.+++++.|.+ +|| +|+++|..... ..+...
T Consensus 9 ~~vl~~p~p-------------~~GHi~P~l~La~~L~~--------rG~----~VT~v~t~~~~-------~~~~~~~~ 56 (482)
T 2pq6_A 9 PHVVMIPYP-------------VQGHINPLFKLAKLLHL--------RGF----HITFVNTEYNH-------KRLLKSRG 56 (482)
T ss_dssp CEEEEECCS-------------SHHHHHHHHHHHHHHHH--------TTC----EEEEEEEHHHH-------HHHC----
T ss_pred CEEEEecCc-------------cchhHHHHHHHHHHHHh--------CCC----eEEEEeCCchh-------hhhccccc
Confidence 378888742 37888889999998887 899 99999754210 011111
Q ss_pred ----cCCCCeEEEEecCCCCccccccccccccchhhHHHH---HHHHHHHHHHhc-----CCCceEEEeCCCChhHHHHH
Q 005625 357 ----SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETF---TEDVGSEITAEL-----QGFPDFIIGNYSDGNLVASL 424 (687)
Q Consensus 357 ----~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f---~~~~~~~L~~~~-----~~~PDLIH~Hys~aglvA~l 424 (687)
.+.++++++.+|-+-.. .-.+.-....+..++..+ .....+.+++.+ ..+||+|.+-.... .+..
T Consensus 57 ~~~~~~~~~i~~~~l~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~--~~~~ 133 (482)
T 2pq6_A 57 PKAFDGFTDFNFESIPDGLTP-MEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS--FTIQ 133 (482)
T ss_dssp --------CEEEEEECCCCC----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCT--HHHH
T ss_pred cccccCCCceEEEECCCCCCC-cccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcch--hHHH
Confidence 11136777777732110 000000011222222222 112222333322 25899999886543 4566
Q ss_pred HHHcCCCcEEEEe
Q 005625 425 LAYKMGITQCTIA 437 (687)
Q Consensus 425 lAr~lgVP~V~T~ 437 (687)
+|+++|||.+...
T Consensus 134 vA~~lgiP~v~~~ 146 (482)
T 2pq6_A 134 AAEEFELPNVLYF 146 (482)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHcCCCEEEEe
Confidence 7889999987653
No 54
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=82.65 E-value=6.4 Score=43.20 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=65.2
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEeccCCCCCCCcccccccccc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ-GLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~-Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i~ 357 (687)
++|++++.- ..|.+.-.+++++.|.+ + || +|+++|..... ....++.+.
T Consensus 7 ~~vl~~p~p-------------~~GHv~P~l~La~~L~~--------r~Gh----~Vt~~t~~~~~-----~~~~~~~~~ 56 (480)
T 2vch_A 7 PHVAIIPSP-------------GMGHLIPLVEFAKRLVH--------LHGL----TVTFVIAGEGP-----PSKAQRTVL 56 (480)
T ss_dssp CEEEEECCS-------------CHHHHHHHHHHHHHHHH--------HHCC----EEEEEECCSSS-----CC-CHHHHH
T ss_pred cEEEEecCc-------------chhHHHHHHHHHHHHHh--------CCCC----EEEEEECCCcc-----hhhhhhhhc
Confidence 478888632 46788888999988877 6 99 99999864211 011122111
Q ss_pred C--CCCeEEEEecCCCCccccccccccccchhhHHHHH---HHHHHHHHHhc--CCCc-eEEEeCCCChhHHHHHHHHcC
Q 005625 358 G--TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---EDVGSEITAEL--QGFP-DFIIGNYSDGNLVASLLAYKM 429 (687)
Q Consensus 358 ~--~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~---~~~~~~L~~~~--~~~P-DLIH~Hys~aglvA~llAr~l 429 (687)
. ..+++.+.+|..... ...+....+..+..+. ....+.+++.+ ..++ |+|.+...... +..+|+++
T Consensus 57 ~~~~~~i~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~--~~~vA~~l 130 (480)
T 2vch_A 57 DSLPSSISSVFLPPVDLT----DLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTD--AFDVAVEF 130 (480)
T ss_dssp C-CCTTEEEEECCCCCCT----TSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGG--GHHHHHHT
T ss_pred cccCCCceEEEcCCCCCC----CCCCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchh--HHHHHHHc
Confidence 1 146778877754211 1101111222111111 11122222321 2467 99998654332 45688999
Q ss_pred CCcEEEE
Q 005625 430 GITQCTI 436 (687)
Q Consensus 430 gVP~V~T 436 (687)
|||.+..
T Consensus 131 giP~v~~ 137 (480)
T 2vch_A 131 HVPPYIF 137 (480)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9997654
No 55
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=75.41 E-value=1.2 Score=47.80 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=26.4
Q ss_pred CCceEEEeCCCChhHHHHHHHHcCCCcEEEEecCC
Q 005625 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (687)
Q Consensus 406 ~~PDLIH~Hys~aglvA~llAr~lgVP~V~T~HaL 440 (687)
.+||+|+++... ..+.++|+.+|||.|...++.
T Consensus 143 ~~pDlVv~d~~~--~~~~~aA~~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 143 WRPDLVIWEPLT--FAAPIAAAVTGTPHARLLWGP 175 (441)
T ss_dssp HCCSEEEECTTC--THHHHHHHHHTCCEEEECSSC
T ss_pred cCCCEEEecCcc--hhHHHHHHHcCCCEEEEecCC
Confidence 589999998643 467788999999999886654
No 56
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=73.79 E-value=18 Score=39.35 Aligned_cols=126 Identities=11% Similarity=0.090 Sum_probs=66.5
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEEeccCCCCCCCccccccccc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~--Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~i 356 (687)
++|+++.. -++|.+.-.+++++.|.. + || +|+++|...... ......++.+
T Consensus 10 ~~vv~~p~-------------p~~GHi~P~l~La~~L~~--------r~pG~----~Vt~v~t~~~~~--~~~~~~~~~~ 62 (463)
T 2acv_A 10 SELIFIPA-------------PGIGHLASALEFAKLLTN--------HDKNL----YITVFCIKFPGM--PFADSYIKSV 62 (463)
T ss_dssp EEEEEECC-------------SSTTTHHHHHHHHHHHHH--------TCTTE----EEEEEECCCTTC--CCCHHHHHHH
T ss_pred CEEEEEcC-------------cccchHHHHHHHHHHHHh--------cCCCc----EEEEEEcCCcch--hhhhhhhhhc
Confidence 47888863 258888999999998877 7 99 999997642111 0000111111
Q ss_pred c-CCCCeEEEEecCCCCcccccccccccc-chhhHHHHHHHHHHHHHHhc-CCCceEEEeCCCChhHHHHHHHHcCCCcE
Q 005625 357 S-GTEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (687)
Q Consensus 357 ~-~~~~v~IlRvP~~~~~~~~~~~isr~~-iwp~Le~f~~~~~~~L~~~~-~~~PDLIH~Hys~aglvA~llAr~lgVP~ 433 (687)
. ...+++++.+|....... ....+... +...+.. ...-.+.+++.+ ..+||+|.+..... .+..+|+++|||.
T Consensus 63 ~~~~~~i~~~~lp~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~d~vI~D~~~~--~~~~vA~~lgiP~ 138 (463)
T 2acv_A 63 LASQPQIQLIDLPEVEPPPQ-ELLKSPEFYILTFLES-LIPHVKATIKTILSNKVVGLVLDFFCV--SMIDVGNEFGIPS 138 (463)
T ss_dssp HCSCTTEEEEECCCCCCCCG-GGGGSHHHHHHHHHHH-THHHHHHHHHHHCCTTEEEEEEEGGGG--GGHHHHHHTTCCE
T ss_pred ccCCCCceEEECCCCCCCcc-cccCCccHHHHHHHHh-hhHHHHHHHHhccCCCCeEEEECCcch--hHHHHHHHcCCCE
Confidence 1 114788888886531110 00000000 1111111 111222333322 25899999775432 2456788999996
Q ss_pred EE
Q 005625 434 CT 435 (687)
Q Consensus 434 V~ 435 (687)
+.
T Consensus 139 v~ 140 (463)
T 2acv_A 139 YL 140 (463)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 57
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=69.28 E-value=29 Score=37.66 Aligned_cols=122 Identities=13% Similarity=0.024 Sum_probs=64.5
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeccCCCCCCCcccccccc--c
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER--V 356 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ip~~~g~~~~q~lE~--i 356 (687)
++|+++..- +.|.+.-.+++++.|.+ +||++ .|+++|..... ..+.. .
T Consensus 8 ~hvv~~p~p-------------~~GHi~P~l~la~~L~~--------rGh~v--~vt~~~t~~~~-------~~~~~~~~ 57 (456)
T 2c1x_A 8 PHVAVLAFP-------------FSTHAAPLLAVVRRLAA--------AAPHA--VFSFFSTSQSN-------ASIFHDSM 57 (456)
T ss_dssp CEEEEECCC-------------SSSSHHHHHHHHHHHHH--------HCTTS--EEEEEECHHHH-------HHHC----
T ss_pred CEEEEEcCc-------------ccchHHHHHHHHHHHHh--------CCCCe--EEEEEeCchhH-------HHhhcccc
Confidence 378888632 47888999999999887 68865 77777642100 00000 0
Q ss_pred c-CCCCeEEEEecCCCCccccccccccccchhhHHHHHH-------HHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHc
Q 005625 357 S-GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE-------DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK 428 (687)
Q Consensus 357 ~-~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~~-------~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~ 428 (687)
. ...+++++.+|-+-..+. -.....+..+..|.. +.+..+.+....+||+|.+-.... .+..+|++
T Consensus 58 ~~~~~~i~~~~i~~glp~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~ 131 (456)
T 2c1x_A 58 HTMQCNIKSYDISDGVPEGY----VFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIW--FAADMAAE 131 (456)
T ss_dssp ---CTTEEEEECCCCCCTTC----CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTST--THHHHHHH
T ss_pred ccCCCceEEEeCCCCCCCcc----cccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchH--hHHHHHHH
Confidence 0 013677777764211110 000011222222221 222222222246899999876543 24567889
Q ss_pred CCCcEEEE
Q 005625 429 MGITQCTI 436 (687)
Q Consensus 429 lgVP~V~T 436 (687)
+|||.+..
T Consensus 132 lgiP~v~~ 139 (456)
T 2c1x_A 132 MGVAWLPF 139 (456)
T ss_dssp HTCEEEEE
T ss_pred hCCCEEEE
Confidence 99998754
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=59.26 E-value=9.9 Score=44.18 Aligned_cols=99 Identities=4% Similarity=-0.071 Sum_probs=68.7
Q ss_pred CCCCCEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCC-CcEEEcC
Q 005625 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIA 647 (687)
Q Consensus 569 ~~~kPiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~-~~V~flG 647 (687)
+.+..++.+..++ .|=-+..++.+.++.+.-++..|++...+.. . .+.+.+.+++.|+. ++|+|.+
T Consensus 520 p~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------~-----~~~l~~~~~~~gi~~~r~~f~~ 586 (723)
T 4gyw_A 520 PEDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV------G-----EPNIQQYAQNMGLPQNRIIFSP 586 (723)
T ss_dssp CTTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------G-----HHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------H-----HHHHHHHHHhcCCCcCeEEECC
Confidence 4444444444444 4556777788888777778899988764321 1 13567788999995 7899999
Q ss_pred cccCcccHHHHHHHhhcCCcEEEEcCCC-CCchhhhcccC
Q 005625 648 AQTNRARNGELYRYIADTKGAFVQVYVH-PIPLNFLPSYK 686 (687)
Q Consensus 648 ~~l~~~dl~elYr~aad~~dVFVlPSl~-gFGLviLEa~~ 686 (687)
..++++--..|+.+ |||.=|--| | |.|.+||+.
T Consensus 587 -~~~~~~~l~~~~~~----Di~LDt~p~~g-~tT~~eal~ 620 (723)
T 4gyw_A 587 -VAPKEEHVRRGQLA----DVCLDTPLCNG-HTTGMDVLW 620 (723)
T ss_dssp -CCCHHHHHHHGGGC----SEEECCSSSCC-SHHHHHHHH
T ss_pred -CCCHHHHHHHhCCC----eEEeCCCCcCC-HHHHHHHHH
Confidence 57776665666643 999988777 6 888888863
No 59
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=52.92 E-value=18 Score=37.22 Aligned_cols=84 Identities=8% Similarity=0.043 Sum_probs=52.0
Q ss_pred CEEEEEecCCcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcccCc
Q 005625 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652 (687)
Q Consensus 573 PiIl~VGRLdp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l~~ 652 (687)
.+++++|--++..-...+++++... .++.+|.|... + ..+++++.+++. .++...++ +
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~------~~i~vv~G~~~-------~---~~~~l~~~~~~~---~~v~v~~~-~-- 216 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT------KIISIATSSSN-------P---NLKKLQKFAKLH---NNIRLFID-H-- 216 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT------SCEEEEECTTC-------T---THHHHHHHHHTC---SSEEEEES-C--
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC------CCEEEEECCCc-------h---HHHHHHHHHhhC---CCEEEEeC-H--
Confidence 4677889887665444566666431 24555554422 1 123455555543 37899896 4
Q ss_pred ccHHHHHHHhhcCCcEEEEcCCCCCchhhhcccC
Q 005625 653 ARNGELYRYIADTKGAFVQVYVHPIPLNFLPSYK 686 (687)
Q Consensus 653 ~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~~ 686 (687)
++++++|..| |+.|.++ |.|+.|+.+
T Consensus 217 ~~m~~~m~~a----DlvI~~g----G~T~~E~~~ 242 (282)
T 3hbm_A 217 ENIAKLMNES----NKLIISA----SSLVNEALL 242 (282)
T ss_dssp SCHHHHHHTE----EEEEEES----SHHHHHHHH
T ss_pred HHHHHHHHHC----CEEEECC----cHHHHHHHH
Confidence 5799999854 8998854 578887653
No 60
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=48.66 E-value=3.9 Score=43.23 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=51.4
Q ss_pred CCEEEEEecCC---cCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCc
Q 005625 572 KPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (687)
Q Consensus 572 kPiIl~VGRLd---p~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~ 648 (687)
.+++++.|++. +.|.+..+++|++.+ ..+++++.|..+. + . ..+.++|++.|+
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~------~-------~------~~~~~~v~~~~~ 293 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTEL------V-------L------PDDRDDCFAIDE 293 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTC------C-------C------SCCCTTEEEESS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCccc------c-------c------cCCCCCEEEecc
Confidence 46788899984 678888899998754 2456665454220 0 0 145678999996
Q ss_pred ccCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 649 QTNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 649 ~l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
++ ..+++.. +|+||.-+ | +.+++||.
T Consensus 294 -~~---~~~ll~~----~d~~v~~~--G-~~t~~Ea~ 319 (416)
T 1rrv_A 294 -VN---FQALFRR----VAAVIHHG--S-AGTEHVAT 319 (416)
T ss_dssp -CC---HHHHGGG----SSEEEECC--C-HHHHHHHH
T ss_pred -CC---hHHHhcc----CCEEEecC--C-hhHHHHHH
Confidence 66 3556643 49999732 4 34777775
No 61
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=43.55 E-value=1.5e+02 Score=32.25 Aligned_cols=123 Identities=14% Similarity=0.091 Sum_probs=64.6
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCC--CCCCCeEEEEeccCCCCCCCccccccccc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDAKGTTCNQRLERV 356 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~G--h~~~~~V~VlTr~ip~~~g~~~~q~lE~i 356 (687)
.+|+++..= ..|.+.-.+++|+.|.. +| + .|+++|..... .++...
T Consensus 14 ~hvv~~P~p-------------~~GHi~P~l~Lak~L~~--------~g~~~----~vT~~~t~~~~-------~~~~~~ 61 (454)
T 3hbf_A 14 LHVAVLAFP-------------FGTHAAPLLSLVKKIAT--------EAPKV----TFSFFCTTTTN-------DTLFSR 61 (454)
T ss_dssp CEEEEECCC-------------SSSSHHHHHHHHHHHHH--------HCTTS----EEEEEECHHHH-------HHSCSS
T ss_pred CEEEEEcCC-------------cccHHHHHHHHHHHHHh--------CCCCE----EEEEEeCHHHH-------Hhhhcc
Confidence 478888732 36788889999999888 68 6 89999753101 011000
Q ss_pred --cCCCCeEEEEecCCCCccccccccccccchhhHHHHH---HHHHHHHHHhcCCCceEEEeCCCChhHHHHHHHHcCCC
Q 005625 357 --SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGI 431 (687)
Q Consensus 357 --~~~~~v~IlRvP~~~~~~~~~~~isr~~iwp~Le~f~---~~~~~~L~~~~~~~PDLIH~Hys~aglvA~llAr~lgV 431 (687)
...++++++.+|-+-..+.-..--+...+...+.... .+.+..+.++...+||.|.+..... .+.-+|+++||
T Consensus 62 ~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~--w~~~vA~~lgI 139 (454)
T 3hbf_A 62 SNEFLPNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFW--FGADLAEEMHA 139 (454)
T ss_dssp SSCCCTTEEEEECCCCCCTTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCT--THHHHHHHTTC
T ss_pred cccCCCCceEEecCCCCCCCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcch--HHHHHHHHhCC
Confidence 0023678888874322111000000000111122111 1222222222245789998876542 35667889999
Q ss_pred cEEE
Q 005625 432 TQCT 435 (687)
Q Consensus 432 P~V~ 435 (687)
|.+.
T Consensus 140 P~~~ 143 (454)
T 3hbf_A 140 KWVP 143 (454)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 9764
No 62
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=37.45 E-value=8.6 Score=40.59 Aligned_cols=79 Identities=10% Similarity=0.097 Sum_probs=49.7
Q ss_pred CCEEEEEecC-CcCCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCccc
Q 005625 572 KPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (687)
Q Consensus 572 kPiIl~VGRL-dp~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~l 650 (687)
..++++.|++ ++.|.+..+++|++++. .+++++.|..+. + ..++.++|++.|+ +
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~------~-------------~~~~~~~v~~~~~-~ 293 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL------V-------------LPDDGADCFAIGE-V 293 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC------C-------------CSSCGGGEEECSS-C
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCcc------c-------------ccCCCCCEEEeCc-C
Confidence 4678889999 68999999999997642 456655443220 0 0135678999996 7
Q ss_pred CcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 651 NRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 651 ~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
+. .+++.. +|+||..+ | ..+++||.
T Consensus 294 ~~---~~~l~~----~d~~v~~~--G-~~t~~Ea~ 318 (415)
T 1iir_A 294 NH---QVLFGR----VAAVIHHG--G-AGTTHVAA 318 (415)
T ss_dssp CH---HHHGGG----SSEEEECC--C-HHHHHHHH
T ss_pred Ch---HHHHhh----CCEEEeCC--C-hhHHHHHH
Confidence 64 345543 49999743 3 25677764
No 63
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=35.69 E-value=23 Score=35.33 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=22.6
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ 340 (687)
|||+++.-.||+| ..+++.|.+ +|| +|.+++|.
T Consensus 1 MkILVTGatGfIG-----------------~~L~~~L~~--------~G~----~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIG-----------------TALTQLLNA--------RGH----EVTLVSRK 33 (298)
T ss_dssp CEEEEETTTSHHH-----------------HHHHHHHHH--------TTC----EEEEEESS
T ss_pred CEEEEECCCCHHH-----------------HHHHHHHHH--------CCC----EEEEEECC
Confidence 6888887555432 234455544 899 99999985
No 64
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=32.43 E-value=21 Score=35.14 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=21.8
Q ss_pred CccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecc
Q 005625 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (687)
Q Consensus 276 p~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ 340 (687)
||+|||+|+.- |++ +. .++++|.+ +|+ +|.+++|.
T Consensus 3 ~m~~~ilVtGa-G~i--------------G~---~l~~~L~~--------~g~----~V~~~~r~ 37 (286)
T 3ius_A 3 AMTGTLLSFGH-GYT--------------AR---VLSRALAP--------QGW----RIIGTSRN 37 (286)
T ss_dssp --CCEEEEETC-CHH--------------HH---HHHHHHGG--------GTC----EEEEEESC
T ss_pred CCcCcEEEECC-cHH--------------HH---HHHHHHHH--------CCC----EEEEEEcC
Confidence 57789998864 533 32 23444433 799 99999985
No 65
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=29.85 E-value=1.4e+02 Score=29.18 Aligned_cols=22 Identities=5% Similarity=0.049 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHhcCCCceEEEeCCC
Q 005625 392 FTEDVGSEITAELQGFPDFIIGNYS 416 (687)
Q Consensus 392 f~~~~~~~L~~~~~~~PDLIH~Hys 416 (687)
....+.+.|.+ .+||+|.+|+.
T Consensus 83 ~~~~l~~~ir~---~~P~~V~t~~~ 104 (227)
T 1uan_A 83 QRLKLAQALRR---LRPRVVFAPLE 104 (227)
T ss_dssp HHHHHHHHHHH---HCEEEEEEECS
T ss_pred HHHHHHHHHHH---hCCCEEEeCCC
Confidence 33444444433 68999999864
No 66
>2jmk_A Hypothetical protein TA0956; protein binding; NMR {Thermoplasma acidophilum} PDB: 2k24_A
Probab=28.12 E-value=27 Score=30.35 Aligned_cols=30 Identities=27% Similarity=0.529 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhhcCCCcchHhHHhcCCC
Q 005625 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLP 276 (687)
Q Consensus 247 ~r~~e~~~~l~~~l~~p~~~~le~f~~r~p 276 (687)
.|.+|.+.-|.|+++.||-+.|+.|++|..
T Consensus 25 dkF~dSf~el~dv~~~~~~Del~dFIsryA 54 (111)
T 2jmk_A 25 DRFLESFSELYDIIDENDTDVMMDFISRFA 54 (111)
T ss_dssp GGHHHHHHHHHHHTTSCCSSHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhccccHHHHHHHHHHhh
Confidence 477899999999999999999999999864
No 67
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=28.06 E-value=78 Score=32.47 Aligned_cols=37 Identities=19% Similarity=0.413 Sum_probs=26.0
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 337 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~Vl 337 (687)
||||||.-| |+.++. ..+|.+...+.++++|| +|.++
T Consensus 23 MKiLII~aH-----------P~~~S~-------n~aL~~~~~~~l~~~G~----eV~v~ 59 (280)
T 4gi5_A 23 MKVLLIYAH-----------PEPRSL-------NGALKNFAIRHLQQAGH----EVQVS 59 (280)
T ss_dssp CEEEEEECC-----------SCTTSH-------HHHHHHHHHHHHHHTTC----EEEEE
T ss_pred CeEEEEEeC-----------CCCccH-------HHHHHHHHHHHHHHCCC----eEEEE
Confidence 499999866 554443 34555666677888999 87776
No 68
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=27.16 E-value=2.7e+02 Score=27.84 Aligned_cols=11 Identities=18% Similarity=-0.028 Sum_probs=6.8
Q ss_pred HHHcCCCc-EEE
Q 005625 425 LAYKMGIT-QCT 435 (687)
Q Consensus 425 lAr~lgVP-~V~ 435 (687)
++++.+++ +|+
T Consensus 135 a~~~~~~~~~v~ 146 (346)
T 4egb_A 135 LVKKYPHIKLVQ 146 (346)
T ss_dssp HHHHSTTSEEEE
T ss_pred HHHhcCCCEEEE
Confidence 45567887 554
No 69
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=25.26 E-value=82 Score=30.33 Aligned_cols=40 Identities=10% Similarity=0.102 Sum_probs=23.2
Q ss_pred ccceEEEEccCCCCCCCCCCCCCC--CCchhHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEEe
Q 005625 277 MVFNVVILSPHGYFGQANVLGLPD--TGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVT 338 (687)
Q Consensus 277 ~~~rIliiS~Hg~f~~~~vlG~Pd--tGGqvvyVldlarAL~~~l~~~l~~~--Gh~~~~~V~VlT 338 (687)
|+|||++|+-| |. .+|.. ++|.+.+.+.++++ |+ +|.++-
T Consensus 3 mM~kiLiI~gS-----------pr~~~~S~s-------~~l~~~~~~~~~~~~~g~----ev~~~d 46 (211)
T 3p0r_A 3 AMTKVLFVKAN-----------NRPAEQAVS-------VKLYEAFLASYKEAHPND----TVVELD 46 (211)
T ss_dssp -CCEEEEEECC-----------CSCTTTCHH-------HHHHHHHHHHHHHHCTTS----EEEEEE
T ss_pred ccCEEEEEEeC-----------CCCCCCCHH-------HHHHHHHHHHHHHhCCCC----eEEEEE
Confidence 67899999844 44 45543 23333444456666 77 776653
No 70
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=24.06 E-value=3.9e+02 Score=27.01 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=25.1
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlTr~ 340 (687)
||||+..--|+.+ ..+..|+++|.+ .| +|.|+...
T Consensus 2 M~ILlTNDDGi~a--------------pGi~aL~~~l~~--------~g-----~V~VVAP~ 36 (251)
T 2phj_A 2 PTFLLVNDDGYFS--------------PGINALREALKS--------LG-----RVVVVAPD 36 (251)
T ss_dssp CEEEEECSSCTTC--------------HHHHHHHHHHTT--------TS-----EEEEEEES
T ss_pred CEEEEECCCCCCC--------------HHHHHHHHHHHh--------cC-----CEEEEecC
Confidence 6999999877643 467777777755 44 78888764
No 71
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=23.92 E-value=1e+02 Score=30.87 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=18.2
Q ss_pred cccCCeeeeccccCCCHHHHHHHHHHHHHHhcCCCC
Q 005625 187 HKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPP 222 (687)
Q Consensus 187 ~~~~g~~l~~~~~~~~~~~l~~~~~~a~~~~~~~~~ 222 (687)
|+|+.-..+++++|.|.++++..+. .-.|..+|.
T Consensus 6 ~~~~~~~~~~~~~i~~~~~ie~~~~--~p~lg~iP~ 39 (271)
T 3bfv_A 6 HHHHHGSVIFDKRIKDEEDVEKELG--LPVLGSIQK 39 (271)
T ss_dssp ----------CCCCCSHHHHHHHHC--CCEEEEEEC
T ss_pred cccccccEEeeCcCCCHHHHHHHhC--CCeEEEecc
Confidence 4445557899999999998887653 455666665
No 72
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=23.30 E-value=90 Score=32.52 Aligned_cols=81 Identities=6% Similarity=0.014 Sum_probs=45.7
Q ss_pred CCEEEEEecCCc--CCCHHHHHHHHhhccccCCCceEEEEEccCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcCcc
Q 005625 572 KPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (687)
Q Consensus 572 kPiIl~VGRLdp--~Kni~~LVeAfa~l~~l~~~~nLVLVGG~~d~~~s~d~ee~~el~~L~~li~elgL~~~V~flG~~ 649 (687)
..++++.|.+.. .+.+..+++++.. ...+++++.|... +.+ ++ . .+.++|++.|+
T Consensus 256 ~~v~v~~Gs~~~~~~~~~~~~~~al~~-----~~~~~~~~~g~~~-----~~~------~~----~--~~~~~v~~~~~- 312 (424)
T 2iya_A 256 PVLLIALGSAFTDHLDFYRTCLSAVDG-----LDWHVVLSVGRFV-----DPA------DL----G--EVPPNVEVHQW- 312 (424)
T ss_dssp CEEEEECCSSSCCCHHHHHHHHHHHTT-----CSSEEEEECCTTS-----CGG------GG----C--SCCTTEEEESS-
T ss_pred CEEEEEcCCCCcchHHHHHHHHHHHhc-----CCcEEEEEECCcC-----ChH------Hh----c--cCCCCeEEecC-
Confidence 456778898872 2334455566543 2356655444311 011 11 1 35788999996
Q ss_pred cCcccHHHHHHHhhcCCcEEEEcCCCCCchhhhccc
Q 005625 650 TNRARNGELYRYIADTKGAFVQVYVHPIPLNFLPSY 685 (687)
Q Consensus 650 l~~~dl~elYr~aad~~dVFVlPSl~gFGLviLEa~ 685 (687)
++.. ++|.. +|+||..+ | +.+++||.
T Consensus 313 ~~~~---~~l~~----~d~~v~~~--G-~~t~~Ea~ 338 (424)
T 2iya_A 313 VPQL---DILTK----ASAFITHA--G-MGSTMEAL 338 (424)
T ss_dssp CCHH---HHHTT----CSEEEECC--C-HHHHHHHH
T ss_pred CCHH---HHHhh----CCEEEECC--c-hhHHHHHH
Confidence 6642 56664 48998643 2 35777775
No 73
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=22.92 E-value=1e+02 Score=29.02 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=23.4
Q ss_pred ccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH-HHhCCCCCCCeEEEEe
Q 005625 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLR-IKRQGLDISPKILIVT 338 (687)
Q Consensus 277 ~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~-l~~~Gh~~~~~V~VlT 338 (687)
|+|||++++ |.|..+|....+. + .+.+. +.+.|+ +|.++-
T Consensus 1 mMmkilii~-----------gS~r~~g~t~~la---~----~i~~~~l~~~g~----~v~~~d 41 (197)
T 2vzf_A 1 MTYSIVAIS-----------GSPSRNSTTAKLA---E----YALAHVLARSDS----QGRHIH 41 (197)
T ss_dssp CCEEEEEEE-----------CCSSTTCHHHHHH---H----HHHHHHHHHSSE----EEEEEE
T ss_pred CCceEEEEE-----------CCCCCCChHHHHH---H----HHHHHHHHHCCC----eEEEEE
Confidence 567999997 3454466543333 2 23334 555788 777664
No 74
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=22.80 E-value=1.2e+02 Score=30.25 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=28.9
Q ss_pred cCCCcchHhHHhcCCC-ccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Q 005625 261 QAPDPSTLEKFLGRLP-MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 337 (687)
Q Consensus 261 ~~p~~~~le~f~~r~p-~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~Vl 337 (687)
+.|+++.+ =...+ +.|||++|+ |.|..+|.... ++++ +.+.+++.|+ +|.++
T Consensus 19 ~~~~~~~~---~~~~~~~~mkIliI~-----------GS~r~~s~t~~---La~~----~~~~l~~~g~----eve~i 71 (247)
T 2q62_A 19 RLPDSASL---RPAFSTHRPRILILY-----------GSLRTVSYSRL---LAEE----ARRLLEFFGA----EVKVF 71 (247)
T ss_dssp CCCCGGGG---CCCCCCSCCEEEEEE-----------CCCCSSCHHHH---HHHH----HHHHHHHTTC----EEEEC
T ss_pred CCCChhhh---hhhccCCCCeEEEEE-----------ccCCCCCHHHH---HHHH----HHHHHhhCCC----EEEEE
Confidence 44455544 33444 346999997 44555665432 3333 3334556898 77766
No 75
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=22.71 E-value=1.2e+02 Score=30.55 Aligned_cols=39 Identities=13% Similarity=0.202 Sum_probs=24.5
Q ss_pred cceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEe
Q 005625 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVT 338 (687)
Q Consensus 278 ~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~VlT 338 (687)
+|||++|.-| |..+|. .++|.+.+.+.+++.|+ +|.++-
T Consensus 2 MmkiLiI~gS-----------pr~~s~-------t~~la~~~~~~l~~~g~----eV~~~d 40 (273)
T 1d4a_A 2 GRRALIVLAH-----------SERTSF-------NYAMKEAAAAALKKKGW----EVVESD 40 (273)
T ss_dssp CCEEEEEECC-----------SCTTSH-------HHHHHHHHHHHHHHTTC----EEEEEE
T ss_pred CCEEEEEEeC-----------CCCccH-------HHHHHHHHHHHHHhCCC----eEEEEE
Confidence 4799999855 343443 33444445556777899 777764
No 76
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=22.62 E-value=2.8e+02 Score=26.97 Aligned_cols=35 Identities=9% Similarity=0.010 Sum_probs=25.7
Q ss_pred CCceEEEeC-CCChhHHHHHHHHcCCCcEEEEecCC
Q 005625 406 GFPDFIIGN-YSDGNLVASLLAYKMGITQCTIAHAL 440 (687)
Q Consensus 406 ~~PDLIH~H-ys~aglvA~llAr~lgVP~V~T~HaL 440 (687)
.+||+|-+- .+.+.-+|..+|.++++|++.-+=++
T Consensus 90 ~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~l 125 (217)
T 3ih5_A 90 EQPQICLMGATVIGRDLGPRVSSALTSGLTADCTSL 125 (217)
T ss_dssp HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSEE
T ss_pred cCCCEEEEeCCcchhhHHHHHHHHhCCCccceEEEE
Confidence 479977755 44677788889999999997544333
No 77
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=22.52 E-value=1.4e+02 Score=28.31 Aligned_cols=54 Identities=15% Similarity=0.231 Sum_probs=34.1
Q ss_pred ceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeE-EEEecc
Q 005625 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKI-LIVTRL 340 (687)
Q Consensus 279 ~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V-~VlTr~ 340 (687)
|+|+|-.=||-.++-.+- +-.|| ++=.++..+++..+.+.|++.|. +| .++||.
T Consensus 2 m~IviDpGHGG~D~G~~~--ga~g~--~~Ekdi~l~ia~~l~~~L~~~G~----~V~v~ltR~ 56 (180)
T 3qay_A 2 MKICITVGHSILKSGACT--SADGV--VNEYQYNKSLAPVLADTFRKEGH----KVDVIICPE 56 (180)
T ss_dssp CEEEEEECCCBCTTSCBC--SCBSS--SBHHHHHHHHHHHHHHHHHHTTC----EEEEECCCS
T ss_pred eEEEEECCCCCCCCCCcC--CCCCC--ccHHHHHHHHHHHHHHHHHhcCC----cceEEECCC
Confidence 589998889843211111 12344 34456666677777888999999 88 456773
No 78
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=22.44 E-value=72 Score=25.02 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=16.7
Q ss_pred CCCCCCCchhHHHHhhhcCC
Q 005625 219 KLPPDTPFSQFEYVLQGMGF 238 (687)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~ 238 (687)
..++++=|..--..|++|||
T Consensus 2 ~~~~ee~~a~~L~~L~eMGF 21 (54)
T 2cp8_A 2 SSGSSGQTAALMAHLFEMGF 21 (54)
T ss_dssp CCSSCTTHHHHHHHHHHHTC
T ss_pred CCCHHHhhHHHHHHHHHcCC
Confidence 46788888877779999999
No 79
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=20.71 E-value=4.1e+02 Score=26.58 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=21.4
Q ss_pred cCCCceEEEeC------CC----ChhHH-HHHHHHcCCCcEEEE
Q 005625 404 LQGFPDFIIGN------YS----DGNLV-ASLLAYKMGITQCTI 436 (687)
Q Consensus 404 ~~~~PDLIH~H------ys----~aglv-A~llAr~lgVP~V~T 436 (687)
+..+||+|.+- .. .+|.| |++-+..+|||-|-.
T Consensus 84 l~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~ 127 (244)
T 2e6c_A 84 LFGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAF 127 (244)
T ss_dssp HSCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEE
Confidence 45789999842 21 24444 445577899998754
No 80
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=20.42 E-value=99 Score=31.71 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=30.6
Q ss_pred hhcCCCcchHhHHhcCCCccceEEEEccCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Q 005625 259 ILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 337 (687)
Q Consensus 259 ~l~~p~~~~le~f~~r~p~~~rIliiS~Hg~f~~~~vlG~PdtGGqvvyVldlarAL~~~l~~~l~~~Gh~~~~~V~Vl 337 (687)
.++.|+...|.. . .+.|||++|+ |.|..+|....+. + .+.+.+++.|+ +|.++
T Consensus 43 ~~~~~~~~~~~~---~-~~~mKILiI~-----------GS~R~~S~T~~La---~----~~~~~l~~~G~----eveii 95 (279)
T 2fzv_A 43 FAIERPALGLAP---D-APPVRILLLY-----------GSLRARSFSRLAV---E----EAARLLQFFGA----ETRIF 95 (279)
T ss_dssp TCCSCTTTTTSC---C-CSCCEEEEEE-----------SCCSSSCHHHHHH---H----HHHHHHHHTTC----EEEEB
T ss_pred HcCCCChhhccC---C-CCCCEEEEEE-----------eCCCCCCHHHHHH---H----HHHHHHhhCCC----EEEEE
Confidence 455566555543 1 3456999997 4555566543333 3 33344556898 77776
No 81
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=20.30 E-value=2.6e+02 Score=27.73 Aligned_cols=22 Identities=14% Similarity=0.341 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEeCCC
Q 005625 392 FTEDVGSEITAELQGFPDFIIGNYS 416 (687)
Q Consensus 392 f~~~~~~~L~~~~~~~PDLIH~Hys 416 (687)
....+.+.|.+ .+||+|.+|+.
T Consensus 85 ~~~~l~~~ir~---~~PdvV~t~~~ 106 (242)
T 2ixd_A 85 YIREIVKVIRT---YKPKLVFAPYY 106 (242)
T ss_dssp HHHHHHHHHHH---HCCSEEEEECS
T ss_pred HHHHHHHHHHH---cCCCEEEECCC
Confidence 33344444433 68999999864
No 82
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=20.21 E-value=72 Score=38.90 Aligned_cols=92 Identities=20% Similarity=0.342 Sum_probs=61.8
Q ss_pred hhhhhhhhhhcccCCCCCC------chhHHHHHHhcccCCeeeeccccCC---------CH---------HHHHHHHHHH
Q 005625 158 GVQFLNRHLSSSMFRNKDC------LEPLLDFLRAHKYKGHLLMLNDRIQ---------SI---------SRLQSSLSKA 213 (687)
Q Consensus 158 g~~~l~~~l~~~~~~~~~~------~~~l~~~l~~~~~~g~~l~~~~~~~---------~~---------~~l~~~~~~a 213 (687)
|||.|.++|-+|+|.+... ++.-.+.|+.|.+.|+.--+..-|. |+ .+...-+..|
T Consensus 6 giQmLS~~Lh~QiF~~~~~~~~~~~v~~s~~hL~~H~L~gk~t~~~p~v~~~LP~L~G~nldEHF~~lg~~~s~PYl~~a 85 (1172)
T 3ikm_A 6 DIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAA 85 (1172)
T ss_dssp SSSCCCSSHHHHSCSSCCCCCTHHHHHHHHHTTTTTTCCSSSCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHhhCCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCcCCCcCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 8999999999999965421 3444578999999998754443332 11 2334456777
Q ss_pred HHHhcCCCCCCCchhHHHHhhhcCCccccC-----CcHHHHHHHHHHHHHhhcCCCcchH
Q 005625 214 EDHLSKLPPDTPFSQFEYVLQGMGFEKGWG-----DTAEHVLEMMHLLLDILQAPDPSTL 268 (687)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~e~gwg-----~~~~r~~e~~~~l~~~l~~p~~~~l 268 (687)
.+++..-.|..| ++|=|.+||- .+++. ++.|+...|
T Consensus 86 ~~~~~~~lP~~P--------~~W~~~~GWTrY~~dg~~e~-----------Vd~P~E~~L 126 (1172)
T 3ikm_A 86 NLLLQAQLPPKP--------PAWAWAEGWTRYGPEGEAVP-----------VAIPEERAL 126 (1172)
T ss_dssp HHHHHCCCCCCC--------CSCCCSSCCCCCSSSCCCCT-----------TSCCCSSSB
T ss_pred HHHHhcCCCCCC--------cCccccCCeeeECCCCceee-----------CCCCCccce
Confidence 777765445556 6899999994 34444 478887755
Done!