BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005627
(687 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2
SV=3
Length = 1278
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/687 (65%), Positives = 553/687 (80%), Gaps = 7/687 (1%)
Query: 5 QAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEK 61
+AVHSGADLESAI+T KGH+ + LS KL++ L +K + +E+ L+EK
Sbjct: 595 KAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVREENTEPLIEK 651
Query: 62 LVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLL 121
LVD+RI+LHP L R RAKDLLFLDI+L S KTT+E+ L LNF++PPEI++ I ++L
Sbjct: 652 LVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPPEIIYVICVVL 711
Query: 122 ESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKF 181
E+LCLS+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA+R Q Y
Sbjct: 712 ENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTII 771
Query: 182 QPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPV 241
QP+ KYLG LL V+K+ ID FTEE++RA AVLS L+NRF+P LRK+ANLGCWQVIS
Sbjct: 772 QPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIANLGCWQVISSA 831
Query: 242 EVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRA 301
+ GF+ VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M DVLSHVSIRA
Sbjct: 832 DAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRA 891
Query: 302 RNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGI 361
RN+K+CFATCFDQN+L NL+ KEG+A+SI KST L+ISD ++S++S+ + S+PRG+
Sbjct: 892 RNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRHIFISSVPRGV 951
Query: 362 TFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSE 421
K K F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+PFG FE +LS+
Sbjct: 952 ISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALPFGTFENILSD 1011
Query: 422 NINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE 481
+ NKD+A +IS L +N GDL+KL+ IQEA+LQMSAP++L EL K+RS MP+ GDE
Sbjct: 1012 DSNKDVARRISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDE 1071
Query: 482 -GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPL 540
GWN +W +IKKVWASKWNERA++SC+K L+HD +CMAVLIQE ICGDYAFVIHT NP+
Sbjct: 1072 SGWNRSWVAIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDYAFVIHTNNPV 1131
Query: 541 SGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIF 600
SGD+SEIYTEIVKGLGETLVGAYPGRAMSF+TKK NLKSP V YPSK IGLY KPSIIF
Sbjct: 1132 SGDSSEIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIF 1191
Query: 601 RSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIE 660
RSDSN EDLE AGAGLYDSVIM++ E+VV+DYSR+P++ DKSF+ +FS IAE G +IE
Sbjct: 1192 RSDSNNEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIE 1251
Query: 661 SLYGYPQDIEGVLKDGLIYVVQARPQM 687
S+YG PQDIEGV+K G IY+VQARPQ+
Sbjct: 1252 SIYGCPQDIEGVVKGGHIYIVQARPQV 1278
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1
PE=2 SV=1
Length = 1475
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/701 (56%), Positives = 507/701 (72%), Gaps = 14/701 (1%)
Query: 1 MAMPQAVHSGADLESAIETCY----KGHNSVIS---DSFGSLSSKLRECLTFIKAHIHDE 53
M +AVHSGADLESAI C +G ++ + +L S E L F+ H+ D
Sbjct: 775 MRTLKAVHSGADLESAITNCLGYRSEGQGFMVGVQINPIPNLPSGFPELLQFVSEHVEDR 834
Query: 54 SINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEI 113
++ L+E L+++R E+ P+L R KDLLFLDI+L S+++T +E+G ++LN + P +I
Sbjct: 835 NVEALLEGLLEARQEIRPLLCKHNDRLKDLLFLDIALESSVRTAIEKGYEELNEAGPEKI 894
Query: 114 MFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAER 173
M+F+SL+LE+L LS+ +NEDLIYC K W ++ WAL AK++LDR +L LA +
Sbjct: 895 MYFVSLILENLALSLDDNEDLIYCLKGWSNALSMSKSKSDNWALFAKSVLDRTRLALAGK 954
Query: 174 SQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLG 233
+ YQK QPS +YLG LL V+K+ +D FTEE++RA S A LS+L+NR +PVLRK A+LG
Sbjct: 955 ADWYQKVLQPSAEYLGTLLSVDKWAVDIFTEEMIRAGSAAALSLLLNRLDPVLRKTASLG 1014
Query: 234 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDV 293
WQVISPVEV G++ V+EL+ +Q+K Y +PTI++A R+ GEEEIP G VAVLT DMPDV
Sbjct: 1015 SWQVISPVEVFGYVAVVDELLAVQDKSYDQPTILLARRVKGEEEIPHGTVAVLTADMPDV 1074
Query: 294 LSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSA 353
LSHVS+RARN KVCFATCFD NIL +L+ EGK + ++ S ++ S + S L SSSA
Sbjct: 1075 LSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLHLKPTSADIAYSVVEGSELQDSSSA 1134
Query: 354 LPSIPRG----ITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVA 409
G + +K F G+YA++ ++FT ++VGAKS NI +L+ +VPSWI IPTSVA
Sbjct: 1135 NLKEEDGPSSSVALVKKQFAGRYAITSDEFTGELVGAKSRNIAYLKGKVPSWIGIPTSVA 1194
Query: 410 IPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNK 469
+PFG FE VLS++IN+ +A K+ L + + D S L+EI+E VLQM AP L+ ELK +
Sbjct: 1195 LPFGVFEKVLSDDINQAVAEKLQILKQKLGEEDHSALREIRETVLQMKAPNQLVQELKTE 1254
Query: 470 MRSSGMPWPGDEG---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETI 526
M+SSGMPWPGDEG W AW +IKKVWASKWNERAF S R+ L+H+ LCMAVL+QE I
Sbjct: 1255 MKSSGMPWPGDEGEQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLCMAVLVQEII 1314
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYP 586
DYAFVIHT NP SGD+SEIY E+VKGLGETLVGAYPGRA+SFV KKN+LKSP V YP
Sbjct: 1315 NADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKNDLKSPRVLGYP 1374
Query: 587 SKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 646
SK IGL+ + SIIFRSDSNGEDLE YAGAGLYDSV M++ EKVVLDYS D ++ D FQ
Sbjct: 1375 SKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDHLITDGHFQQ 1434
Query: 647 SVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM 687
S+ S IA G IE L+G QDIEGV++DG IYVVQ RPQM
Sbjct: 1435 SILSSIARAGCEIEELFGSAQDIEGVVRDGKIYVVQTRPQM 1475
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1
PE=1 SV=2
Length = 1464
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/699 (55%), Positives = 509/699 (72%), Gaps = 13/699 (1%)
Query: 1 MAMPQAVHSGADLESAIETC--YKGHN-----SVISDSFGSLSSKLRECLTFIKAHIHDE 53
M +AVHSGADLESAI C YK V + L S ++ L F+ H+ D+
Sbjct: 767 MRTLKAVHSGADLESAIANCMGYKTEGEGFMVGVQINPVSGLPSGFQDLLHFVLDHVEDK 826
Query: 54 SINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEI 113
++ L+E+L+++R EL P+L R KDLLFLDI+L S ++T +ERG ++LN ++P +I
Sbjct: 827 NVETLLERLLEAREELRPLLLKPNNRLKDLLFLDIALDSTVRTAVERGYEELNNANPEKI 886
Query: 114 MFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAER 173
M+FISL+LE+L LSV +NEDL+YC K W + D WAL AKA+LDR +L LA +
Sbjct: 887 MYFISLVLENLALSVDDNEDLVYCLKGWNQALSMSNGGDNHWALFAKAVLDRTRLALASK 946
Query: 174 SQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLG 233
++ Y QPS +YLG +LGV+++ ++ FTEE++RA S A LS L+NR +PVLRK ANLG
Sbjct: 947 AEWYHHLLQPSAEYLGSILGVDQWALNIFTEEIIRAGSAASLSSLLNRLDPVLRKTANLG 1006
Query: 234 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDV 293
WQ+ISPVE G++ V+EL+++QN++Y +PTI++A + GEEEIP G VA++TPDMPDV
Sbjct: 1007 SWQIISPVEAVGYVVVVDELLSVQNEIYEKPTILVAKSVKGEEEIPDGAVALITPDMPDV 1066
Query: 294 LSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSA 353
LSHVS+RARN KVCFATCFD NIL +L+ KEG+ + ++ +++I S+++ L SSS
Sbjct: 1067 LSHVSVRARNGKVCFATCFDPNILADLQAKEGRILLLKPTPSDIIYSEVNEIELQ-SSSN 1125
Query: 354 LPSIPRGITFK--RKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIP 411
L T + +K F G YA+S ++FT +MVGAKS NI +L+ +VPS + IPTSVA+P
Sbjct: 1126 LVEAETSATLRLVKKQFGGCYAISADEFTSEMVGAKSRNIAYLKGKVPSSVGIPTSVALP 1185
Query: 412 FGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMR 471
FG FE VLS++IN+ +A ++ L K ++ GD S L EI+ VL +SAP L+ ELK KM+
Sbjct: 1186 FGVFEKVLSDDINQGVAKELQILMKKLSEGDFSALGEIRTTVLDLSAPAQLVKELKEKMQ 1245
Query: 472 SSGMPWPGDEG---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICG 528
SGMPWPGDEG W AW +IKKVWASKWNERA+ S RK L+HD LCMAVL+QE I
Sbjct: 1246 GSGMPWPGDEGPKRWEQAWMAIKKVWASKWNERAYFSTRKVKLDHDYLCMAVLVQEIINA 1305
Query: 529 DYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSK 588
DYAFVIHT NP SGD+SEIY E+V+GLGETLVGAYPGRA+SF+ KK +L SP V YPSK
Sbjct: 1306 DYAFVIHTTNPSSGDDSEIYAEVVRGLGETLVGAYPGRALSFICKKKDLNSPQVLGYPSK 1365
Query: 589 LIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSV 648
IGL+ K SIIFRSDSNGEDLE YAGAGLYDSV M++ EKVV+DYS DP++ D +F+ ++
Sbjct: 1366 PIGLFIKRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVIDYSSDPLITDGNFRQTI 1425
Query: 649 FSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM 687
S IA G IE LYG PQDIEGV++DG IYVVQ RPQM
Sbjct: 1426 LSNIARAGHAIEELYGSPQDIEGVVRDGKIYVVQTRPQM 1464
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana
GN=GWD1 PE=1 SV=2
Length = 1399
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/698 (55%), Positives = 507/698 (72%), Gaps = 11/698 (1%)
Query: 1 MAMPQAVHSGADLESAIETCYKGHN-------SVISDSFGSLSSKLRECLTFIKAHIHDE 53
M +AVHSGADLESAI+ C + V + L S + L F+ H+ ++
Sbjct: 702 MRTLKAVHSGADLESAIQNCMGYQDDGEGFMVGVQINPVSGLPSGYPDLLRFVLEHVEEK 761
Query: 54 SINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEI 113
++ L+E L+++R EL P+L + R KDLLFLD++L S ++T +ERG + LN + P +I
Sbjct: 762 NVEPLLEGLLEARQELRPLLLKSHDRLKDLLFLDLALDSTVRTAIERGYEQLNDAGPEKI 821
Query: 114 MFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAER 173
M+FISL+LE+L LS +NEDLIYC K W + ++ WAL AK++LDR +L LA +
Sbjct: 822 MYFISLVLENLALSSDDNEDLIYCLKGWQFALDMCKSKKDHWALYAKSVLDRSRLALASK 881
Query: 174 SQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLG 233
++ Y + QPS +YLG LGV++ + FTEE++RA S A LS L+NR +PVLRK ANLG
Sbjct: 882 AERYLEILQPSAEYLGSCLGVDQSAVSIFTEEIIRAGSAAALSSLVNRLDPVLRKTANLG 941
Query: 234 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDV 293
WQVISPVEV G++ V+EL+T+QNK Y RPTII+A+R+ GEEEIP G VAVLTPDMPDV
Sbjct: 942 SWQVISPVEVVGYVIVVDELLTVQNKTYDRPTIIVANRVRGEEEIPDGAVAVLTPDMPDV 1001
Query: 294 LSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSL-SSS 352
LSHVS+RARN K+CFATCFD IL +L+ K+GK +S++ S +++ +++ S LS SS
Sbjct: 1002 LSHVSVRARNGKICFATCFDSGILSDLQGKDGKLLSLQPTSADVVYKEVNDSELSSPSSD 1061
Query: 353 ALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPF 412
L P I+ +K F G+YA+S E+FT D+VGAKS NI +L+ +VPSW+ IPTSVA+PF
Sbjct: 1062 NLEDAPPSISLVKKQFAGRYAISSEEFTSDLVGAKSRNIGYLKGKVPSWVGIPTSVALPF 1121
Query: 413 GAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRS 472
G FE V+SE N+ + +K+ L K ++ GD L+EI++ +L + AP L+ ELK+ M+S
Sbjct: 1122 GVFEKVISEKANQAVNDKLLVLKKTLDEGDQGALKEIRQTLLGLVAPPELVEELKSTMKS 1181
Query: 473 SGMPWPGDEG---WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD 529
S MPWPGDEG W AW +IKKVWASKWNERA+ S RK L+HD LCMAVL+QE I D
Sbjct: 1182 SDMPWPGDEGEQRWEQAWAAIKKVWASKWNERAYFSTRKVKLDHDYLCMAVLVQEVINAD 1241
Query: 530 YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKL 589
YAFVIHT NP SGD+SEIY E+VKGLGETLVGAYPGR++SF+ KKNNL SP+V YPSK
Sbjct: 1242 YAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRSLSFICKKNNLDSPLVLGYPSKP 1301
Query: 590 IGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVF 649
IGL+ + SIIFRSDSNGEDLE YAGAGLYDSV M++ ++VVLDY+ DP++ D SFQ V
Sbjct: 1302 IGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEDQVVLDYTTDPLITDLSFQKKVL 1361
Query: 650 SKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM 687
S IA G IE LYG QDIEGV++DG +YVVQ RPQ+
Sbjct: 1362 SDIARAGDAIEKLYGTAQDIEGVIRDGKLYVVQTRPQV 1399
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=GWD3 PE=3 SV=2
Length = 1206
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 165/635 (25%), Positives = 279/635 (43%), Gaps = 105/635 (16%)
Query: 125 CLSVVNNEDLIYCTKDWYRVSESYRTNDAQ--WALQAKAILDRLQLVLAERSQTYQKKFQ 182
C+++ NE L + K +SES D + W+L+ KA LDR + + E S+ F
Sbjct: 603 CIAI-GNEILSWKQKG---LSESEGCEDGKYIWSLRLKATLDRARRLTEEYSEALLSIFP 658
Query: 183 PSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVE 242
V +G LG+ + +TE +RA +S L + +R+V W V+ P
Sbjct: 659 EKVMVIGKALGIPDNSVRTYTEAEIRAGIVFQVSKLCTVLQKAIREVLGSTGWDVLVPGV 718
Query: 243 VCGFITSVNELI--TLQNKVYRRPTIIIASRITGEEEIPVG----VVAVLTPDMPDVLSH 296
G + V ++ +L + V + P ++I + G+EE+ V +L ++P LSH
Sbjct: 719 AHGTLMRVERILPGSLPSSV-KEPVVLIVDKADGDEEVKAAGDNIVGVILLQELPH-LSH 776
Query: 297 VSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSN-----LSLSS 351
+ +RAR V F TC + + ++ L EGK + + S N+ +S +S N +S
Sbjct: 777 LGVRARQENVVFVTCEYDDTVTDVYLLEGKYIRLEASSINVNLSIVSEKNDNAVSTEPNS 836
Query: 352 SALP---------SIPRGITFKRKIFRGK---------YAVSVEDFTPDMVGAKSCNIKF 393
+ P S+P I ++ + K A+ + + + + GAK+ +
Sbjct: 837 TGNPFQQKLQNEFSLPSDIEMPLQMSKQKSKSGVNGSFAALELSEASVESAGAKAAACRT 896
Query: 394 LR------------ERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKF---- 437
L + VP+ ++P+ IPFG+ E L + + + + S L K
Sbjct: 897 LSVLASLSNKVYSDQGVPAAFRVPSGAVIPFGSMEDALKK--SGSLESFTSLLEKIETAK 954
Query: 438 INGGDLSKLQ-EIQEAVLQMSAPLSLIYELKN--------KMRSS-------GMPWPG-- 479
+ G++ L E+Q + +S P I LK +RSS GM G
Sbjct: 955 VENGEVDSLALELQAIISHLSPPEETIIFLKRIFPQDVRLIVRSSANVEDLAGMSAAGLY 1014
Query: 480 DEGWNLAW-------RSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAF 532
D N++ ++ KVWAS + RA +S R A + + MAVL+QE + D +F
Sbjct: 1015 DSIPNVSLMDPCAFGAAVGKVWASLYTRRAILSRRAAGVYQRDATMAVLVQEILQPDLSF 1074
Query: 533 VIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL 592
V+HT P D + E+ GLGETL A R + N + T S
Sbjct: 1075 VLHTVCPADHDPKVVQAEVAPGLGETL--ASGTRGTPWRLSCNKFDGKVATLAFSN---- 1128
Query: 593 YGKPSIIFRSD-SNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSK 651
+ + ++ S +NGE + ++ +DYS+ P+ D +F+ +
Sbjct: 1129 FSEEMVVHNSGPANGEVI------------------RLTVDYSKKPLSVDTTFRKQFGQR 1170
Query: 652 IAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 686
+A G+ +E +G QD+EG L I++VQ+RPQ
Sbjct: 1171 LAAIGQYLEQKFGSAQDVEGCLVGKDIFIVQSRPQ 1205
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana
GN=GWD3 PE=1 SV=1
Length = 1196
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 167/636 (26%), Positives = 273/636 (42%), Gaps = 101/636 (15%)
Query: 125 CLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPS 184
CL++ NE L + +D E WA++ KA LDR + + AE S + F P+
Sbjct: 586 CLAI-GNELLAWRERDLLE-KEGEEDGKTIWAMRLKATLDRARRLTAEYSDLLLQIFPPN 643
Query: 185 VKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVC 244
V+ LG LG+ + + +TE +RA +S L +R W V+ P
Sbjct: 644 VEILGKALGIPENSVKTYTEAEIRAGIIFQISKLCTVLLKAVRNSLGSEGWDVVVPGSTS 703
Query: 245 GFITSVNELITLQ-NKVYRRPTIIIASRITGEEEIPV--GVVA--VLTPDMPDVLSHVSI 299
G + V ++ P I++ ++ G+EE+ G +A +L ++P LSH+ +
Sbjct: 704 GTLVQVESIVPGSLPATSGGPIILLVNKADGDEEVSAANGNIAGVMLLQELPH-LSHLGV 762
Query: 300 RARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKST--NLIISDISSSNLSLSSSALPSI 357
RAR K+ F TC D + + ++R GK V + + NLI+S S S SSA
Sbjct: 763 RARQEKIVFVTCDDDDKVADIRRLVGKFVRLEASPSHVNLILSTEGRSRTS-KSSATKKT 821
Query: 358 PRGITFKRKIFRGKYAVSVEDFTPDMV----------------------------GAKSC 389
+ K+K + ++ E+ P G+KS
Sbjct: 822 DKNSLSKKKTDKKSLSIDDEESKPGSSSSNSLLYSSKDIPSGGIIALADADVPTSGSKSA 881
Query: 390 NIKFL------------RERVPSWIKIPTSVAIPFGAFETVLSENINKD-IANKISRLYK 436
L VP+ K+PT V IPFG+ E L +N +++ A+ + +L
Sbjct: 882 ACGLLASLAEASSKVHSEHGVPASFKVPTGVVIPFGSMELALKQNNSEEKFASLLEKLET 941
Query: 437 F-INGGDLSKL-QEIQEAVLQMSAPLSLIYELKNK--------MRSS-------GMPWPG 479
GG+L + +I E + + P I + +RSS GM G
Sbjct: 942 ARPEGGELDDICDQIHEVMKTLQVPKETINSISKAFLKDARLIVRSSANVEDLAGMSAAG 1001
Query: 480 --DEGWNLA-------WRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDY 530
+ N++ S+ +VWAS + RA +S R A ++ MAVL+QE + D
Sbjct: 1002 LYESIPNVSPSDPLVFSDSVCQVWASLYTRRAVLSRRAAGVSQREASMAVLVQEMLSPDL 1061
Query: 531 AFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLI 590
+FV+HT +P D++ + EI GLGETL G + KL
Sbjct: 1062 SFVLHTVSPADPDSNLVEAEIAPGLGETLASGTRGTPWRLAS--------------GKLD 1107
Query: 591 GLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFS 650
G+ ++ F + S E+L +G G D + ++ +DYS+ + D F+ +
Sbjct: 1108 GIV--QTLAFANFS--EEL-LVSGTGPADGKYV----RLTVDYSKKRLTVDSVFRQQLGQ 1158
Query: 651 KIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 686
++ G +E +G QD+EG L +Y+VQ+RPQ
Sbjct: 1159 RLGSVGFFLERNFGCAQDVEGCLVGEDVYIVQSRPQ 1194
>sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=ppsA PE=3 SV=1
Length = 753
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 74/337 (21%)
Query: 383 MVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGG 441
+VG K N+ + LR +P +P + F + + IA KI L + ++
Sbjct: 16 LVGGKGANLGELLRAEIP----VPDGFVVDARTFREFIQKT---GIAEKIYSLLRELDVE 68
Query: 442 DLSKL----QEIQEAVLQMSAPLSLIYELKNKMR-------------------SSGMP-- 476
D KL +EI+E + + P + E++ R + +P
Sbjct: 69 DTEKLDAVSREIREIIEKTEMPEDIEREIREAYRKLCEEEGKEVYVAVRSSATAEDLPDA 128
Query: 477 -WPGDE-------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICG 528
+ G + G + +KK W S + RA + H+++ +AV++Q+ +
Sbjct: 129 SFAGQQETYLNVVGEDEVVEKVKKCWGSLFTPRAIYYRVQKGFRHEDVSIAVVVQKMVNS 188
Query: 529 DYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSK 588
+ + V+ T +P+SG+ I E V GLGE +V VT + +
Sbjct: 189 EKSGVMFTSHPVSGEKKCI-IEAVFGLGEAIVSG-------LVTPDTYVYDRVKRKIEEV 240
Query: 589 LIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSV 648
IG K ++ R D +E PEK + + ++ D+ +
Sbjct: 241 KIG--EKKFMLTRKDGKTVKVEL-------------PPEK-----ANERVLSDEEIE--- 277
Query: 649 FSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP 685
K+ G++IE YG PQD+E ++ G IY+VQ+RP
Sbjct: 278 --KLVTLGELIEDHYGKPQDVEWAIEGGKIYIVQSRP 312
>sp|O57830|PPSA_PYRHO Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=ppsA PE=3 SV=1
Length = 821
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+KK WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 189 VKKCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 248
Query: 550 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 607
GLGE +V GA ++ +K K K+I K ++ R+ G+
Sbjct: 249 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGKG 298
Query: 608 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 663
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 299 TVQVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEEHY 337
Query: 664 GYPQDIEGVL--KDGLIYVVQARP 685
G+PQDIE DG +Y+VQ+RP
Sbjct: 338 GWPQDIEWAYDKDDGKLYIVQSRP 361
>sp|Q9V2H7|PPSA_PYRAB Probable phosphoenolpyruvate synthase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=ppsA PE=3 SV=1
Length = 819
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+K+ WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 186 VKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 245
Query: 550 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 607
GLGE +V GA ++ +K K K+I K ++ R+ G+
Sbjct: 246 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGKG 295
Query: 608 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 663
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 296 TVTVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEEHY 334
Query: 664 GYPQDIEGVL--KDGLIYVVQARP 685
G+PQDIE DG +Y+VQ+RP
Sbjct: 335 GWPQDIEWAYDKDDGKLYIVQSRP 358
>sp|O27190|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=ppsA PE=3 SV=1
Length = 684
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+++ WAS + RA + N +H + +AV++QE + + A V+ T +P +G++ I
Sbjct: 181 VRRCWASLFEARAIFYREENNFDHSKVYIAVVVQEMVDAEKAGVMFTVHPSTGEDR-ILI 239
Query: 550 EIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL-YGKPSIIFRSDSNGED 608
E GLGE +V +V K KL+ G+ +I+F + +G
Sbjct: 240 EGSWGLGEAVVSGSVTPDTYWVDKGT-----------GKLLEFTVGEKNIMF-TREDGRT 287
Query: 609 LEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQD 668
++K L + +++D E + +AE G+ I+ YG PQD
Sbjct: 288 VKKEVPPELRNKRVLSDGE---------------------IAALAEMGRRIQDHYGSPQD 326
Query: 669 IEGVLKDGLIYVVQARP 685
E + DG +Y++Q+RP
Sbjct: 327 TEWAIMDGDVYMLQSRP 343
>sp|P42850|PPSA_PYRFU Phosphoenolpyruvate synthase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=ppsA PE=1 SV=3
Length = 817
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+K+ WAS W RA K +H + ++ ++Q+ + + + V+ T NP++ + +EI
Sbjct: 186 VKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFTANPVTNNRNEIMI 245
Query: 550 EIVKGLGETLV-GAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE- 607
GLGE +V GA ++ +K K K+I K ++ R+ G
Sbjct: 246 NASWGLGEAVVSGAV--TPDEYIVEKGTWK------IKEKVIA--KKEVMVIRNPETGRG 295
Query: 608 ----DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLY 663
+ +Y G + ++ D E+++ ++A+ G+ IE Y
Sbjct: 296 TVMVKVAEYLGPEWVEKQVLTD-EQII--------------------EVAKMGQKIEDHY 334
Query: 664 GYPQDIEGVL--KDGLIYVVQARP 685
G+PQDIE DG +Y+VQ+RP
Sbjct: 335 GWPQDIEWAYDKDDGKLYIVQSRP 358
>sp|Q9YEC5|PPSA_AERPE Phosphoenolpyruvate synthase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=ppsA PE=3 SV=2
Length = 820
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+K WAS W RA N++H+ MAV++Q+ + + V+ T +P++G+ +I
Sbjct: 155 VKTAWASLWTARALSYRDSLNIDHETALMAVVVQKMVSSRSSGVMFTIHPVTGEEDKIVI 214
Query: 550 EIVKGLGETLVGA--YPGRAMSFVTKKNNLK 578
E + GLGE +VG P R FV K++L+
Sbjct: 215 ESIWGLGEYIVGGKVTPDR---FVVSKSDLE 242
>sp|O34309|PPS_BACSU Putative phosphoenolpyruvate synthase OS=Bacillus subtilis (strain
168) GN=pps PE=3 SV=1
Length = 866
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 482 GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLS 541
G + + I K WAS + +RA I + +H + ++V++Q + + ++ T +P++
Sbjct: 141 GVDAILQHISKCWASLFTDRAVIYRMQNGFDHSQVYLSVIVQRMVFPQASGILFTADPIT 200
Query: 542 GDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFR 601
+ + + GLGE LV V + I T K + +YG+
Sbjct: 201 SNRKVLSIDAGFGLGEALVSGLVSADCFKVQDGQIIDKRIAT----KKMAIYGRKE---- 252
Query: 602 SDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIES 661
G I +D +K ++ ++A G+ IE+
Sbjct: 253 -------------GGTETQQIDSDQQKA------------QTLTDEQILQLARIGRQIEA 287
Query: 662 LYGYPQDIEGVLKDGLIYVVQARP 685
+G PQDIE L Y+VQ+RP
Sbjct: 288 HFGQPQDIEWCLARDTFYIVQSRP 311
>sp|O34796|YVKC_BACSU Uncharacterized phosphotransferase YvkC OS=Bacillus subtilis
(strain 168) GN=yvkC PE=3 SV=1
Length = 831
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 37/198 (18%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+K+ WAS ++ R +K N M +++Q I + + VI ++NP++ D+ E+
Sbjct: 127 VKECWASFFSGRVSSYKKKMNNQIAEPLMGIVVQGLIDSEMSGVIFSRNPVTHDDRELLI 186
Query: 550 EIVKGLGETLVGA--YPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE 607
GLGE +V P +F+ K++ + + G I S + G
Sbjct: 187 SASYGLGEAVVSGNVTPD---TFIVNKSSFE----------IQKEIGAKEIYMESAAEG- 232
Query: 608 DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQ 667
EK + + D E+V+ ++AE K E LYGYP
Sbjct: 233 IAEKETSEDMRSRFCLTD-EQVI--------------------ELAEITKKTEDLYGYPV 271
Query: 668 DIEGVLKDGLIYVVQARP 685
DIE + D IY++QARP
Sbjct: 272 DIEFGIADHQIYLLQARP 289
>sp|Q57962|PPSA_METJA Probable phosphoenolpyruvate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=ppsA PE=3 SV=1
Length = 1188
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 488 RSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEI 547
+ ++K ++S + RA + +H + +A ++Q+ + + A V+ T NP+S + E+
Sbjct: 161 KYVQKCFSSLFTPRAIFYREQQGFDHFKVALAAVVQKLVNAEKAGVMFTVNPISENYDEL 220
Query: 548 YTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGE 607
E GLGE +V V KK IV + + +F D GE
Sbjct: 221 VIEAAWGLGEGVVSGSVSPDTYIVNKKT---LEIVDKH-------IARKETMFVKDEKGE 270
Query: 608 DLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQ 667
+ ++ P D M + ++A+ G IE YG P
Sbjct: 271 ------------TKVVEVP---------DDMKEKQVLSDDEIKELAKIGLNIEKHYGKPM 309
Query: 668 DIEGVLKDGLIYVVQARP 685
D+E + G Y++QARP
Sbjct: 310 DVEWAYEKGKFYMLQARP 327
>sp|O83026|PPSA_DEIRA Phosphoenolpyruvate synthase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=ppsA PE=3 SV=2
Length = 780
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 65/340 (19%)
Query: 382 DMVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFING 440
++VG K+ +I + ++ + +++P A AF L EN I KI+ + ++
Sbjct: 16 EIVGGKNASIGEMIQGLAQADVRVPGGFATTADAFRLFLREN---QIEEKINAKLQALDV 72
Query: 441 GDLSKL----QEIQEAVLQMSAPLSL---IYELKNKM--------RSSG----MP---WP 478
D++ L +EI+ V + P +L I + +M RSS +P +
Sbjct: 73 NDVNALVAAGKEIRGWVEEARLPAALEDAIRQAYGEMGDDPDVAVRSSATAEDLPEASFA 132
Query: 479 GDEGWNLAWRSI-------KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYA 531
G + L R I K V+AS +N+RA N H + ++ +Q + D
Sbjct: 133 GQQETFLNVRGIEEVLNHVKLVFASLYNDRAISYRVHHNFEHSEVALSAGVQRMVRTDLG 192
Query: 532 F--VIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKL 589
V T + SG ++ GLGE +V FV K P +
Sbjct: 193 VSGVAFTLDTESGFRDAVFVTSSYGLGEMVVQGAVNPDEFFVYK------PALE------ 240
Query: 590 IGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVF 649
GK +++ R+ + + YA AG +V +++ E+ S D +
Sbjct: 241 ---QGKKAVLRRTRGSKQKKMIYAEAGGVKTVDVDEAEQRAFSLSDDDL----------- 286
Query: 650 SKIAETGKIIESLYGYPQDIEGVLKDG---LIYVVQARPQ 686
+++A IE YG P DIE KDG IY++QARP+
Sbjct: 287 TELARQCVTIEKHYGRPMDIE-WGKDGRDVQIYILQARPE 325
>sp|P46893|PPSA_STAMF Probable phosphoenolpyruvate synthase OS=Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1) GN=ppsA PE=1 SV=1
Length = 834
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 490 IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYT 549
+K+ WAS + RA + H+ M+V +Q+ + A V+ T +P++GD +
Sbjct: 161 VKRCWASLFTSRAVFYRVAQGIPHEKSLMSVTVQKMVNSRTAGVMFTLHPVTGDEKVVVI 220
Query: 550 EIVKGLGETLVGA--------YPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFR 601
E GLGE++VG + + V +K + K+ + P K GK ++ R
Sbjct: 221 EASWGLGESVVGGKVTPDEWVVDKQTLQIVDQKIHHKTLAIVFDPKK-----GK-NVEIR 274
Query: 602 SDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIES 661
D N + G + V P+K L + ++AE +IE
Sbjct: 275 WDENKQAWVSEEGPVDIEMVKHFHPDKPAL-------------KEEEVKRLAELALLIEK 321
Query: 662 LYGYPQDIEGVLKDGL-----IYVVQAR 684
YG DIE + + +++VQAR
Sbjct: 322 HYGRHMDIEWAVDYDIPFPDNVFIVQAR 349
>sp|Q8G7X1|THIEC_BIFLO Thiamine biosynthesis bifunctional protein ThiEC OS=Bifidobacterium
longum (strain NCC 2705) GN=thiE/thiC PE=3 SV=1
Length = 917
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 514 DNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTK 573
D + M + +++ +C + F +T PL+ D + Y I +G T +G Y + +VT
Sbjct: 689 DTVRMNIELEKAVCHNAPF--YTLGPLTTDTAPGYDHITSAIGATEIGRYGTAMLCYVTP 746
Query: 574 KNNLKSP 580
K +L P
Sbjct: 747 KEHLGLP 753
>sp|C4LD10|ISPH_TOLAT 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Tolumonas
auensis (strain DSM 9187 / TA4) GN=ispH PE=3 SV=1
Length = 310
Score = 36.6 bits (83), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 589 LIGLYGKPSI---IFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQ 645
LIG G P + + + D NG + A DS+ + PEKV SF
Sbjct: 118 LIGHKGHPEVEGTLGQYDENGTGMYLVEDANQVDSLPVQQPEKV-------------SFV 164
Query: 646 TSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQAR 684
T + ET II++L + I+G KD + Y Q R
Sbjct: 165 TQTTLSVDETRDIIDALREHFPAIQGPRKDDICYATQNR 203
>sp|Q98AZ3|THIC_RHILO Phosphomethylpyrimidine synthase OS=Rhizobium loti (strain
MAFF303099) GN=thiC PE=3 SV=1
Length = 619
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 431 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 486
>sp|B9JMY1|THIC_AGRRK Phosphomethylpyrimidine synthase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=thiC PE=3 SV=1
Length = 608
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|Q92TI9|THIC_RHIME Phosphomethylpyrimidine synthase OS=Rhizobium meliloti (strain
1021) GN=thiC PE=3 SV=1
Length = 611
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 428 QLAVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 483
>sp|B9K253|THIC_AGRVS Phosphomethylpyrimidine synthase OS=Agrobacterium vitis (strain S4
/ ATCC BAA-846) GN=thiC PE=3 SV=1
Length = 610
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 427 QLKTCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 482
>sp|Q2K206|THIC_RHIEC Phosphomethylpyrimidine synthase OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=thiC PE=3 SV=1
Length = 610
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q +CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLEVCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|Q3J7C1|THIC_NITOC Phosphomethylpyrimidine synthase OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=thiC PE=3 SV=1
Length = 624
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 440 QLACCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 495
>sp|Q028Z8|THIC_SOLUE Phosphomethylpyrimidine synthase OS=Solibacter usitatus (strain
Ellin6076) GN=thiC PE=3 SV=1
Length = 461
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 514 DNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTK 573
D + M V+ ++ +C + F +T PL D + Y I +G ++G Y + +VT
Sbjct: 281 DQIEMQVIKEKELCFEAPF--YTLGPLVTDIAPGYDHITSAIGAAMIGWYGASMLCYVTP 338
Query: 574 KNNLKSP 580
K +L P
Sbjct: 339 KEHLGLP 345
>sp|Q1GQJ3|THIC_SPHAL Phosphomethylpyrimidine synthase OS=Sphingopyxis alaskensis (strain
DSM 13593 / LMG 18877 / RB2256) GN=thiC PE=3 SV=1
Length = 630
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 439 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 490
>sp|Q21NU6|THIC_SACD2 Phosphomethylpyrimidine synthase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=thiC PE=3 SV=1
Length = 638
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 448 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLP 499
>sp|C5BTK7|THIC_TERTT Phosphomethylpyrimidine synthase OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=thiC PE=3 SV=1
Length = 639
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 446 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLP 497
>sp|Q1D4L3|THIC_MYXXD Phosphomethylpyrimidine synthase OS=Myxococcus xanthus (strain DK
1622) GN=thiC PE=3 SV=1
Length = 624
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 521 LIQE------TICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKK 574
LIQE +CG+ F +T PL+ D + Y G+G ++G + + +VT K
Sbjct: 434 LIQENMTKQLAVCGEAPF--YTLGPLTTDIAPGYDHFTSGIGAAMIGWFGTAMLCYVTPK 491
Query: 575 NNLKSP 580
+L P
Sbjct: 492 EHLGLP 497
>sp|Q87CY6|THIC_XYLFT Phosphomethylpyrimidine synthase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=thiC PE=3 SV=1
Length = 603
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q CG+ F +T PL+ D + Y I +G ++G Y + +VT K +L P
Sbjct: 435 QLAACGEAPF--YTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLP 490
>sp|Q82FI7|THIC_STRAW Phosphomethylpyrimidine synthase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=thiC PE=3 SV=1
Length = 601
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 444 SKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKV--WASKWNER 501
S L E E + ++ A + Y L + +R + DE R++ ++ A ++N +
Sbjct: 339 SFLYENFEELCEILAAYDVTYSLGDGLRPGSIADANDEAQFAELRTLGELNRIAKRFNVQ 398
Query: 502 AFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVG 561
I ++ + + +Q+ IC + F +T PL+ D + Y I G+G ++
Sbjct: 399 TMIEG-PGHVPMHKIKENIDLQQEICDEAPF--YTLGPLTTDVAPAYDHITSGIGAAMIA 455
Query: 562 AYPGRAMSFVTKKNNLKSP 580
+ + +VT K +L P
Sbjct: 456 WWGTAMLCYVTPKEHLGLP 474
>sp|Q8UCC9|THIC_AGRT5 Phosphomethylpyrimidine synthase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=thiC PE=3 SV=2
Length = 607
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 427 QLKTCGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLP 482
>sp|Q9PC93|THIC_XYLFA Phosphomethylpyrimidine synthase OS=Xylella fastidiosa (strain
9a5c) GN=thiC PE=3 SV=2
Length = 601
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 523 QETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
Q CG+ F +T PL+ D + Y I +G ++G Y + +VT K +L P
Sbjct: 435 QLAACGEAPF--YTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLP 490
>sp|Q9UTR7|MCP3_SCHPO Meiotic coiled-coil protein 3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp3 PE=1 SV=1
Length = 952
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 24 HNSVISDSFGSLSSK--LRECLTFI----------------KAHIHDESINQLMEKLVDS 65
HN+ + D F S +++ L++ L+ + K I SIN++ + D
Sbjct: 268 HNNALEDKFNSEAARQLLQKSLSIVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDL 327
Query: 66 RIELHPVLGTARGRAKDLLFLDISLASAIKTTM--ERGLKDLNFSHPPEIMFFISLLLES 123
++E + + + K LL + SL A++T E+ L+++N ++ E ++
Sbjct: 328 KLETEKL----QDQIKALLERNQSLQEALETVKNDEKNLREMNANYETE--------MKE 375
Query: 124 LCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAE-RSQTYQKKFQ 182
+ N E LI D +R E + + +L+ KA L Q ++E R YQ++ Q
Sbjct: 376 ARQKLNNKEALISHYDDDFRAKE-LKISRLSESLREKAGLLEFQSSVSEQRDLLYQEQIQ 434
Query: 183 PSVKYLGCLLGVEKYVIDNFTE 204
S+K + + +Y+++ E
Sbjct: 435 SSIKDMENVFRKNEYLMEELNE 456
>sp|Q9X9U0|THIC_STRCO Phosphomethylpyrimidine synthase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=thiC PE=3 SV=1
Length = 612
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 522 IQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
+Q+ IC + F +T PL+ D + Y I G+G ++ + + +VT K +L P
Sbjct: 423 LQQEICDEAPF--YTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLP 479
>sp|Q3SFG3|THIC_THIDA Phosphomethylpyrimidine synthase OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=thiC PE=3 SV=1
Length = 652
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 522 IQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
IQ C + F +T PL+ D + Y I G+G ++G Y + +VT K +L P
Sbjct: 467 IQLESCSEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP 523
>sp|A4YZQ6|THIC_BRASO Phosphomethylpyrimidine synthase OS=Bradyrhizobium sp. (strain
ORS278) GN=thiC PE=3 SV=1
Length = 633
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|B6JI86|THIC_OLICO Phosphomethylpyrimidine synthase OS=Oligotropha carboxidovorans
(strain ATCC 49405 / DSM 1227 / OM5) GN=thiC PE=3 SV=1
Length = 632
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|Q1QJD3|THIC_NITHX Phosphomethylpyrimidine synthase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=thiC PE=3 SV=1
Length = 643
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|Q68WP2|PPDK_RICTY Pyruvate, phosphate dikinase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=ppdK PE=3 SV=1
Length = 880
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
Query: 589 LIGLYGKPS---IIF-RSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPM---VGD 641
+ G GK S ++F RS S GE L+ ++N + ++ +R PM D
Sbjct: 246 VFGNLGKTSATGVVFTRSPSTGEK-------KLFGEFLINAQGEDIVSGTRTPMPIIAND 298
Query: 642 ----KSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQAR 684
++ VF+K+++ K +E Y QDIE +++ +Y++Q R
Sbjct: 299 SNSMQAMMPEVFTKLSQIAKKLEEHYLDMQDIEFTIENNKLYILQTR 345
>sp|Q07PX1|THIC_RHOP5 Phosphomethylpyrimidine synthase OS=Rhodopseudomonas palustris
(strain BisA53) GN=thiC PE=3 SV=1
Length = 641
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|Q89FP0|THIC_BRAJA Phosphomethylpyrimidine synthase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=thiC PE=3 SV=1
Length = 632
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|Q3SPS0|THIC_NITWN Phosphomethylpyrimidine synthase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=thiC PE=3 SV=1
Length = 646
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|A5EPQ5|THIC_BRASB Phosphomethylpyrimidine synthase OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=thiC PE=3 SV=1
Length = 633
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|Q35648|NU5M_PANTR NADH-ubiquinone oxidoreductase chain 5 OS=Pan troglodytes GN=MT-ND5
PE=3 SV=1
Length = 603
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 509 ANLNHDNLCMAVLIQETICGD-YAFVIHTKNPLSGDNSEIYTEI---VKGLGETLVGAYP 564
N+N +N + I+ G +A + T N L ++ + + LG T +G
Sbjct: 441 TNINENNPTLLNPIKRLTIGSLFAGFLITNNILPMSTPQVTIPLYLKLTALGVTSLGLLT 500
Query: 565 GRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 602
++++T K +KSP+ T + S ++G Y P+I+ RS
Sbjct: 501 ALDLNYLTSKLKMKSPLYTFHFSNMLGFY--PNIMHRS 536
>sp|P03916|NU5M_PANPA NADH-ubiquinone oxidoreductase chain 5 OS=Pan paniscus GN=MT-ND5
PE=3 SV=2
Length = 603
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 510 NLNHDNLCMAVLIQETICGD-YAFVIHTKNPLSGDNSEIYTEI---VKGLGETLVGAYPG 565
N+N +N + I+ G +A T N L S++ + + L T +G
Sbjct: 442 NINENNPTLLNPIKRLTIGSLFAGFFITNNILPMSTSQMTIPLYLKLTALSVTFLGLLTA 501
Query: 566 RAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 602
++++T K +KSP T Y S ++G Y P+I+ RS
Sbjct: 502 LDLNYLTNKLKMKSPPYTFYFSNMLGFY--PNIMHRS 536
>sp|B3QFS9|THIC_RHOPT Phosphomethylpyrimidine synthase OS=Rhodopseudomonas palustris
(strain TIE-1) GN=thiC PE=3 SV=1
Length = 641
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
>sp|P03915|NU5M_HUMAN NADH-ubiquinone oxidoreductase chain 5 OS=Homo sapiens GN=MT-ND5
PE=1 SV=2
Length = 603
Score = 33.5 bits (75), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 552 VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRS 602
+ L T +G ++++T K +KSP+ T Y S ++G Y PSI R+
Sbjct: 488 LTALAVTFLGLLTALDLNYLTNKLKMKSPLCTFYFSNMLGFY--PSITHRT 536
>sp|Q133T3|THIC_RHOPS Phosphomethylpyrimidine synthase OS=Rhodopseudomonas palustris
(strain BisB5) GN=thiC PE=3 SV=1
Length = 641
Score = 33.5 bits (75), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 527 CGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSP 580
CG+ F +T PL+ D + Y I G+G ++G + + +VT K +L P
Sbjct: 436 CGEAPF--YTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 487
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,649,743
Number of Sequences: 539616
Number of extensions: 10211938
Number of successful extensions: 26262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 26201
Number of HSP's gapped (non-prelim): 92
length of query: 687
length of database: 191,569,459
effective HSP length: 124
effective length of query: 563
effective length of database: 124,657,075
effective search space: 70181933225
effective search space used: 70181933225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)