Query 005627
Match_columns 687
No_of_seqs 231 out of 1242
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 02:53:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 100.0 2.1E-50 7.1E-55 474.8 27.4 291 369-686 2-336 (794)
2 1vbg_A Pyruvate,orthophosphate 100.0 4.4E-41 1.5E-45 396.3 14.9 244 370-686 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 100.0 3.5E-40 1.2E-44 388.5 12.1 242 371-686 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 100.0 4.7E-39 1.6E-43 378.0 13.2 266 370-686 4-367 (913)
5 2x0s_A Pyruvate phosphate diki 100.0 1.9E-37 6.4E-42 368.6 9.6 267 370-686 4-367 (913)
6 3t05_A Pyruvate kinase, PK; te 96.2 0.0097 3.3E-07 67.9 9.1 93 236-334 501-595 (606)
7 2e28_A Pyruvate kinase, PK; al 96.0 0.0052 1.8E-07 70.1 5.3 96 236-337 482-579 (587)
8 1zym_A Enzyme I; phosphotransf 95.5 0.059 2E-06 55.4 10.7 75 262-342 153-232 (258)
9 2ols_A Phosphoenolpyruvate syn 95.4 0.0066 2.2E-07 71.8 3.4 99 236-341 364-467 (794)
10 1vbg_A Pyruvate,orthophosphate 94.6 0.018 6.1E-07 68.6 3.9 103 234-341 397-512 (876)
11 1kbl_A PPDK, pyruvate phosphat 94.4 0.019 6.4E-07 68.4 3.5 103 233-340 392-507 (873)
12 1h6z_A Pyruvate phosphate diki 93.7 0.06 2.1E-06 64.2 6.0 77 233-313 421-501 (913)
13 2wqd_A Phosphoenolpyruvate-pro 93.6 0.37 1.3E-05 54.8 12.1 76 262-342 155-234 (572)
14 2hwg_A Phosphoenolpyruvate-pro 93.5 0.34 1.1E-05 55.2 11.5 76 261-342 152-232 (575)
15 2x0s_A Pyruvate phosphate diki 91.0 0.13 4.3E-06 61.8 4.2 75 235-313 423-501 (913)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=2.1e-50 Score=474.84 Aligned_cols=291 Identities=23% Similarity=0.347 Sum_probs=236.2
Q ss_pred CCceeeeCCCCCC---CCcCHHhHhHHHHhhhCC-CCccCCCceeeCHHHHHHHHHhccchhHHHHHHHHHhhhCCCChH
Q 005627 369 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 444 (687)
Q Consensus 369 ~~~~vl~l~e~~~---~~vG~KAanLa~L~~~~p-~~~~VP~GfvIpf~af~~~L~~~~~~~l~~~l~~l~~~~~~~d~~ 444 (687)
+++|++||++.+. +.+|||++||++|.++++ .+++||+||+||+++|++|++++ ++++.|....+.++.++..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHhC---ChHHHHHHHHHhhcccCHH
Confidence 4579999998754 689999999999987432 48999999999999999999987 8888888877777777655
Q ss_pred H----HHHHHHHHHcCCCCHHHHHHHHHHHHh----------------c-------CCCCCCCc-------cHHHHHHHH
Q 005627 445 K----LQEIQEAVLQMSAPLSLIYELKNKMRS----------------S-------GMPWPGDE-------GWNLAWRSI 490 (687)
Q Consensus 445 ~----l~~ir~~I~~~~lP~el~~~L~~a~rS----------------s-------g~~~aG~~-------~~e~l~~AI 490 (687)
. ..++|++|++.++|+++.++|.++++. | +.+|+|++ +++++++||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCCCHHHHHHHH
Confidence 3 378999999999999999999887642 2 13688986 599999999
Q ss_pred HHHHhcCCChHHHHHHHHcCCCCCCcceeEEEEeecCCc--eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCc
Q 005627 491 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 568 (687)
Q Consensus 491 k~VWAS~f~~RA~~yR~~~Gi~~~~~~MAVLVQemV~a~--~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~ 568 (687)
|+||||+||+||+.||+++|++++++.|||+||+||+++ +|||+||+||.||+.+.++||++|||||.||+|.+ +|+
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCceeecCCc-CCc
Confidence 999999999999999999999999999999999999999 99999999999999999999999999999999998 899
Q ss_pred eEEEecCCC--CCCccccccccccccCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccch
Q 005627 569 SFVTKKNNL--KSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 646 (687)
Q Consensus 569 ~f~v~k~~~--~~~~vl~~~sk~i~~~~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~ 646 (687)
.|.++|.+. ....++ .+.++.+ +..+++.. +++ .+|.+..+++++.. .+.++|+|++
T Consensus 238 ~~~v~kp~l~~~~~~i~---~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~------~~~~~L~d~~--- 296 (794)
T 2ols_A 238 EFYVFKPTLKAGKPAIL---RKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEED------RNRFSITDEE--- 296 (794)
T ss_dssp EEEEEHHHHHTTSCCEE---EEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred EEEEeccccccCCccee---eeecccc-ceeEEecc--ccc------CCCeeEEEeCCHHH------hcCCCCCHHH---
Confidence 999998210 001232 3444443 33344422 111 12324566666543 4678999987
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEEECC--eEEEEeeccC
Q 005627 647 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ 686 (687)
Q Consensus 647 ~~l~~La~lg~~IE~~fG~PQDIEwai~~g--~L~IlQsRP~ 686 (687)
+.+|++++..||++||.||||||+++++ +|||||+||+
T Consensus 297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCc
Confidence 7899999999999999999999999976 9999999996
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=100.00 E-value=4.4e-41 Score=396.28 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=190.9
Q ss_pred CceeeeC----CCC---CCCCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhc--cchhHHHHHHHHHhhhC-
Q 005627 370 GKYAVSV----EDF---TPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 439 (687)
Q Consensus 370 ~~~vl~l----~e~---~~~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~--~~~~l~~~l~~l~~~~~- 439 (687)
.+||++| ++. +.+++|||++||++|.+ .+++||+||+||+++|++|++++ .++++++.|....+.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CcEEEECCccccccCccccccCcHHHHHHHHHHH---CCCCCCCeEEECHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 4689999 665 35799999999999998 69999999999999999999876 23466666655433321
Q ss_pred -----CCChH-------------HHHHHHHHHHcCCCCHHHHHHHHHH---------HHh--------------------
Q 005627 440 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------MRS-------------------- 472 (687)
Q Consensus 440 -----~~d~~-------------~l~~ir~~I~~~~lP~el~~~L~~a---------~rS-------------------- 472 (687)
.+|.+ .+..++++|+++.+|+++.++|.++ ||.
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred hhccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhccceeeecChhhHHHH
Confidence 12211 1246789999999999999999852 322
Q ss_pred --------------cC---------CCCCCCc-----------cHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCcce
Q 005627 473 --------------SG---------MPWPGDE-----------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 518 (687)
Q Consensus 473 --------------sg---------~~~aG~~-----------~~e~l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~~~M 518 (687)
+. .+|.|.| .+++++.|||+||||+||+||+.||+.+|++++ ..|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHhcCCCch-hCc
Confidence 11 0122211 258999999999999999999999999999998 799
Q ss_pred eEEEEeecCCc-----eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceEEEecCCCCCCccccccccccccC
Q 005627 519 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 593 (687)
Q Consensus 519 AVLVQemV~a~-----~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~~~ 593 (687)
||+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred eEEEEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCc-Ccchhhh----------h----------
Confidence 99999999886 89999999999999874333456789999999987 7764321 0
Q ss_pred CCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEE
Q 005627 594 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 673 (687)
Q Consensus 594 ~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEwai 673 (687)
+ + ..++ .+.+|++++..||+|||.||||||++
T Consensus 298 ----------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ----------------K----------------N-----------LMPQ-----AYDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ----------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ----------------c----------------c-----------cCHH-----HHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 0 0 0112 26899999999999999999999999
Q ss_pred ECCeEEEEeeccC
Q 005627 674 KDGLIYVVQARPQ 686 (687)
Q Consensus 674 ~~g~L~IlQsRP~ 686 (687)
++|+|||||+||+
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEeccc
Confidence 9999999999996
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=100.00 E-value=3.5e-40 Score=388.52 Aligned_cols=242 Identities=20% Similarity=0.311 Sum_probs=187.4
Q ss_pred ceeeeCCCCCC---CCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhc--cchhHHHHHHHHHhhhC------
Q 005627 371 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN------ 439 (687)
Q Consensus 371 ~~vl~l~e~~~---~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~--~~~~l~~~l~~l~~~~~------ 439 (687)
+|+++|++.+. +++|||++||++|.+ .+++||+||+||+++|++|++++ ..++++++|....+.++
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CeEEECcCCChhhhhhCcHHHHHHHHHHh---CCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhccc
Confidence 58999998754 589999999999998 69999999999999999999876 23456666655443321
Q ss_pred CCC---h----------HHHHHHHHHHHcCCCCHHHHHHHHH----------HHHh------------------------
Q 005627 440 GGD---L----------SKLQEIQEAVLQMSAPLSLIYELKN----------KMRS------------------------ 472 (687)
Q Consensus 440 ~~d---~----------~~l~~ir~~I~~~~lP~el~~~L~~----------a~rS------------------------ 472 (687)
.++ + ..+..+++.|+++.+|+++.++|.+ +||.
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred cCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeeccchhHHHHHHHH
Confidence 011 1 0113457778888999988888874 1220
Q ss_pred ----------c----------------------CCCCCCCccHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCcceeE
Q 005627 473 ----------S----------------------GMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAV 520 (687)
Q Consensus 473 ----------s----------------------g~~~aG~~~~e~l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~~~MAV 520 (687)
+ |.+|| ++.+++++.|||+||||+||+||+.||+.+|++++ ..|||
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp-~dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV 236 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFP-QEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAV 236 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCC-CCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEE
T ss_pred HHhcCcCccCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-ccHHHHHHHHHHHHHhccCCHHHHHHHHHcCCCch-hCceE
Confidence 0 11111 11378999999999999999999999999999997 79999
Q ss_pred EEEeecCCc-----eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceEEEecCCCCCCccccccccccccCCC
Q 005627 521 LIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 595 (687)
Q Consensus 521 LVQemV~a~-----~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~~~~~ 595 (687)
+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 237 ~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~----------l------------ 293 (873)
T 1kbl_A 237 NVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQ----------L------------ 293 (873)
T ss_dssp EEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGG----------H------------
T ss_pred EEEEcccCCCCCceeEEEEEecCCCCCCcccceEEEecCCchhhhcCCc-Cchhhhh----------h------------
Confidence 999999886 89999999999998763323347889999999987 6764311 0
Q ss_pred ceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEEEC
Q 005627 596 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKD 675 (687)
Q Consensus 596 ~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEwai~~ 675 (687)
+ + ..++ .+++|++++..||+|||.||||||++++
T Consensus 294 --------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti~~ 327 (873)
T 1kbl_A 294 --------------E----------------N-----------DMPD-----CYKQFMDLAMKLEKHFRDMQDMEFTIEE 327 (873)
T ss_dssp --------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHTSCEEEEEEEET
T ss_pred --------------c----------------c-----------cCHH-----HHHHHHHHHHHHHHHcCCCeEEEEEEEC
Confidence 0 0 0112 2789999999999999999999999999
Q ss_pred CeEEEEeeccC
Q 005627 676 GLIYVVQARPQ 686 (687)
Q Consensus 676 g~L~IlQsRP~ 686 (687)
|+|||||+||.
T Consensus 328 g~L~iLQtRp~ 338 (873)
T 1kbl_A 328 GKLYFLQTRNG 338 (873)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEeccc
Confidence 99999999996
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=100.00 E-value=4.7e-39 Score=378.03 Aligned_cols=266 Identities=20% Similarity=0.240 Sum_probs=190.3
Q ss_pred CceeeeCCC----CC---CCCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhc-cchhHHHHHHH----HHhh
Q 005627 370 GKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISR----LYKF 437 (687)
Q Consensus 370 ~~~vl~l~e----~~---~~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~-~~~~l~~~l~~----l~~~ 437 (687)
.+||++|++ .+ .+++|||++||++|.+ .|+|||+||+||+++|++|++.+ ..++++++|.. +...
T Consensus 4 ~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~~ 80 (913)
T 1h6z_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcccCChhhHhhcChHhhhHHHHHH---CCCCCCCcEEeeHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 579999987 33 3689999999999999 69999999999999999999765 23455555443 3332
Q ss_pred hC--CCCh-------------HHHHHHHHHHHcCCCCHHHHHH-HH----------HHHHhc---------CCC---C--
Q 005627 438 IN--GGDL-------------SKLQEIQEAVLQMSAPLSLIYE-LK----------NKMRSS---------GMP---W-- 477 (687)
Q Consensus 438 ~~--~~d~-------------~~l~~ir~~I~~~~lP~el~~~-L~----------~a~rSs---------g~~---~-- 477 (687)
.. .+|. .....+++.|+++.++++.++. |. .+||.. |.+ |
T Consensus 81 ~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe~ 160 (913)
T 1h6z_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred hCcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhchhhcCCCHHHHHH
Confidence 22 1221 1235689999999999999998 52 122210 211 1
Q ss_pred ------------------------------------CC----CccHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCcc
Q 005627 478 ------------------------------------PG----DEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 517 (687)
Q Consensus 478 ------------------------------------aG----~~~~e~l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~~~ 517 (687)
.| ++.+++++.||++||||+||+||+.||+.+|++++ ..
T Consensus 161 ~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~-~~ 239 (913)
T 1h6z_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSC-CC
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHHHHHHHcCCChh-hc
Confidence 01 11278999999999999999999999999999995 79
Q ss_pred eeEEEEeecCCc-----eeEEEEecCCCCCCCCcEEEEe-ecCCccccccccCCCCceEEEecCCCCCCccccccccccc
Q 005627 518 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIG 591 (687)
Q Consensus 518 MAVLVQemV~a~-----~SGVlfT~nP~tg~~~~i~iea-~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~ 591 (687)
|||+||+||.++ .|||+||+||.||+++ ++.|+ +.|+||.||+|.+ +|+.|++++.. .+. .+.+.
T Consensus 240 mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~~---~~~i~ 310 (913)
T 1h6z_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RWA---KAHGV 310 (913)
T ss_dssp CCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HHH---TTSSC
T ss_pred ceEEEEEEeccCCCCcceeEEEEeCCCCCCCcc-eeeEEEEecCCchhccCCc-cCeEEEEeccc----chh---hcccc
Confidence 999999999875 6999999999999865 43332 3469999999998 99998775431 010 11000
Q ss_pred cCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEE
Q 005627 592 LYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEG 671 (687)
Q Consensus 592 ~~~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEw 671 (687)
.+ + .. ...| ...+.+++++ +.+|++++..||+|||.||||||
T Consensus 311 ~~-------------~-------~~--~~~~-----------~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIEw 352 (913)
T 1h6z_A 311 GE-------------E-------ER--RKRY-----------PSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEF 352 (913)
T ss_dssp CH-------------H-------HH--HHHS-----------CCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEE
T ss_pred hh-------------h-------hc--ccCc-----------hhhhhcCHHH-----HHHHHHHHHHHHHHhCCCceEEE
Confidence 00 0 00 0000 0112344454 78999999999999999999999
Q ss_pred EEECCeEEEEeeccC
Q 005627 672 VLKDGLIYVVQARPQ 686 (687)
Q Consensus 672 ai~~g~L~IlQsRP~ 686 (687)
++++|+|||||+||.
T Consensus 353 ai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 353 TVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCEEEEEEecCc
Confidence 999999999999995
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=100.00 E-value=1.9e-37 Score=368.61 Aligned_cols=267 Identities=19% Similarity=0.189 Sum_probs=181.8
Q ss_pred CceeeeCCC----CC---CCCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhcc-chhHHHHHHH----HHhh
Q 005627 370 GKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISR----LYKF 437 (687)
Q Consensus 370 ~~~vl~l~e----~~---~~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~~-~~~l~~~l~~----l~~~ 437 (687)
.+||++|.+ .+ .++||||++||++|.+ .|+|||+||+||+.+|++|++.+. .+.+++.|.. +...
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~~ 80 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCccCCcchhhhCcHHHHHHHHHHH---CcCCCCCCEeehHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 479999953 33 2579999999999998 699999999999999999998762 3445544433 2211
Q ss_pred hC--CCChH--------------------H-------HHHHHHHHHcCCCCHHHH-----------------------HH
Q 005627 438 IN--GGDLS--------------------K-------LQEIQEAVLQMSAPLSLI-----------------------YE 465 (687)
Q Consensus 438 ~~--~~d~~--------------------~-------l~~ir~~I~~~~lP~el~-----------------------~~ 465 (687)
.. .+|.. . -..++.++...+-++.++ +.
T Consensus 81 ~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~ 160 (913)
T 2x0s_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHH
T ss_pred hhhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Confidence 10 01100 0 012333332222222221 11
Q ss_pred HHH---HHHhcCC-------CCCCCc------------------cHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCcc
Q 005627 466 LKN---KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 517 (687)
Q Consensus 466 L~~---a~rSsg~-------~~aG~~------------------~~e~l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~~~ 517 (687)
+.+ +.||+.. +|+|+. .+++++.|||+||||+||+||+.||+.+|+++. +.
T Consensus 161 ~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~~ 239 (913)
T 2x0s_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp HHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-CC
T ss_pred HHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHHHHhcCCCcc-cc
Confidence 111 1244432 244421 268999999999999999999999999999985 89
Q ss_pred eeEEEEeecCCc-----eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceEEEecCCCCCCcccccccccccc
Q 005627 518 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL 592 (687)
Q Consensus 518 MAVLVQemV~a~-----~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~~ 592 (687)
+||.||.||.++ .||||||+||.||+++.+.+.++|||||.||+|.+ +|+.|...+... .+ ..+.++.
T Consensus 240 laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~~ 312 (913)
T 2x0s_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVGE 312 (913)
T ss_dssp CEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCCH
T ss_pred cceEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCC-CCcccccchhhh---hh---hhccccc
Confidence 999999999876 68999999999999999999999999999999998 898764332100 00 0010110
Q ss_pred CCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEE
Q 005627 593 YGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGV 672 (687)
Q Consensus 593 ~~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEwa 672 (687)
+ +....|....-...+ ..+.|.+++..||+||+.||||||+
T Consensus 313 k----------------------------------~~~~~~~~~~~~~p~-----~~~~l~~~~~~lE~hy~~~qdiE~a 353 (913)
T 2x0s_A 313 E----------------------------------ERRKRYPSMEEAMPE-----NYRLLCDVRKRLENHYRDMQDLEFT 353 (913)
T ss_dssp H----------------------------------HHHHHSCCHHHHSHH-----HHHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred c----------------------------------cccccccchhhhhHH-----HHHHHHHHHHHHHHhcCcHHHhHHH
Confidence 0 000001100001112 3678999999999999999999999
Q ss_pred EECCeEEEEeeccC
Q 005627 673 LKDGLIYVVQARPQ 686 (687)
Q Consensus 673 i~~g~L~IlQsRP~ 686 (687)
+++|+||+||+||.
T Consensus 354 ~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 354 VQDGRLWLLQCRNG 367 (913)
T ss_dssp EETTEEEEEEEEEC
T ss_pred hcCCchHHHHhhhc
Confidence 99999999999973
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=96.23 E-value=0.0097 Score=67.95 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=65.9
Q ss_pred eeeeceeEEEEEEEecccccccccccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeEEecc
Q 005627 236 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 313 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~l~~~~~~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~d 313 (687)
+.++||.+.|+++++....+.. ..+.++.||+++..+-+ ++| ..+.||+|..-. ..||.++.||++|||-+.--.
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps-~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~ 577 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDET-FVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVE 577 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTT-THHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCT
T ss_pred cccccceEEEEEEEECChHHHh-hcCCCCeEEEECCCCHH-HHHHHHhhEEEEecCCC-cccHHHHHHhhCCCCEEEecc
Confidence 4467778999999999876632 23467889999754422 222 279999998877 899999999999999866433
Q ss_pred hHHHHHhHhcCCCeEEEEEcC
Q 005627 314 QNILRNLRLKEGKAVSIRLKS 334 (687)
Q Consensus 314 ~~~~~~l~~~~Gk~V~l~vs~ 334 (687)
. ... .-.+|+.|.+....
T Consensus 578 ~-a~~--~l~~G~~V~vDg~~ 595 (606)
T 3t05_A 578 K-AVK--NISNNVLVTIDAAQ 595 (606)
T ss_dssp T-HHH--HSCSSCEEEEETTT
T ss_pred c-HHh--hCCCCCEEEEECCC
Confidence 2 222 22489998876554
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=95.97 E-value=0.0052 Score=70.12 Aligned_cols=96 Identities=13% Similarity=0.138 Sum_probs=65.9
Q ss_pred eeeeceeEEEEEEEecccccccccccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeEEecc
Q 005627 236 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 313 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~l~~~~~~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~d 313 (687)
..++||.+.|+++++....+.. ..+.+|.||+++..+=+ ++| ..+.||+|..-. ..||.++.||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps-~~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDAD-MMPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGG-GHHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred ccccCCeEEeeEEEeCCHHHHh-hcCCCCeEEEECCCCHH-HHHHHHhcEEEEEcCCC-CcCHHHHHHHHcCCCEEEecc
Confidence 4567788999999987755421 12466889998754422 122 379999998766 899999999999999866332
Q ss_pred hHHHHHhHhcCCCeEEEEEcCCce
Q 005627 314 QNILRNLRLKEGKAVSIRLKSTNL 337 (687)
Q Consensus 314 ~~~~~~l~~~~Gk~V~l~vs~~~~ 337 (687)
+....+ .+|+.|.+....+.+
T Consensus 559 -~~~~~l--~~G~~v~vDg~~G~V 579 (587)
T 2e28_A 559 -NATTLF--KDGQEITVDGGFGAV 579 (587)
T ss_dssp -THHHHS--CTTCBEEEETTTTEE
T ss_pred -cHHHhC--CCCCEEEEECCCCEE
Confidence 223322 479999886555433
No 8
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=95.55 E-value=0.059 Score=55.36 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCCeEEEEecCCCccccC----CCceEEecCCCCCcchhhhhhhccCCceeEE-ecchHHHHHhHhcCCCeEEEEEcCCc
Q 005627 262 RRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CFDQNILRNLRLKEGKAVSIRLKSTN 336 (687)
Q Consensus 262 ~~p~Ill~~~~~G~EeIp----~~V~gVit~~~~~~LSHv~vrARn~gVp~a~-~~d~~~~~~l~~~~Gk~V~l~vs~~~ 336 (687)
..|.||+++..+= .+++ ..+.||||..-. ..||.++.||++|||-+. |.+ ....+ .+|+.|.+....+.
T Consensus 153 ~~~~ILVa~~l~P-s~~~~l~~~~~~givt~~Gg-~tSH~AIlAR~lgIPavvg~~~--~~~~~--~~G~~v~vDg~~G~ 226 (258)
T 1zym_A 153 QDEVILVAADLTP-SETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS--VTSQV--KNDDYLILDAVNNQ 226 (258)
T ss_dssp CSCEEEECSCCCH-HHHHHSCGGGEEEEECSCCC-SSSHHHHHHHHHTCCEECCCSC--HHHHC--CTTCEEEECCSSCC
T ss_pred CCCeEEEECCCCH-HHHHhhchhhcEEEEEcCCC-cccHHHHHHHHcCCCEEEechh--HHHhC--CCCCEEEEECCCCe
Confidence 5677888763221 1111 169999997665 999999999999999765 333 22322 47999988776655
Q ss_pred eEEeec
Q 005627 337 LIISDI 342 (687)
Q Consensus 337 ~~~~~~ 342 (687)
+.+.+.
T Consensus 227 v~~~p~ 232 (258)
T 1zym_A 227 VYVNPT 232 (258)
T ss_dssp EEESCC
T ss_pred EEECcC
Confidence 555443
No 9
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=95.41 E-value=0.0066 Score=71.81 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=54.8
Q ss_pred eeeeceeEEEEEEEecccccccccccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeEEecc
Q 005627 236 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 313 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~l~~~~~~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~d 313 (687)
..++||.+.|++++|...++.. .+..+.||+++..+ -+++| ..+.||||..-. ..||.+|.||++|||-+.--.
T Consensus 364 ~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~-p~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg~~ 439 (794)
T 2ols_A 364 RAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTD-PDWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVGCG 439 (794)
T ss_dssp BC--CCCCCBCBC----------------CEEEESCCC-GGGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEECCT
T ss_pred cccCCCcceEEEEEecCHHHHH--hcCCCeEEEECCCC-HHHHHHHhhCcEEEEcCCC-cccHHHHHHhHCCCCEEEcCc
Confidence 5668899999998887666532 33566798887543 23344 279999998766 999999999999999865333
Q ss_pred hHHHHHhHhcCCCeEEE---EEcCCceEEee
Q 005627 314 QNILRNLRLKEGKAVSI---RLKSTNLIISD 341 (687)
Q Consensus 314 ~~~~~~l~~~~Gk~V~l---~vs~~~~~~~~ 341 (687)
. ....+ .+|+.|.+ ..+.+.+...+
T Consensus 440 ~-~~~~~--~~G~~v~v~c~Dg~~G~v~~g~ 467 (794)
T 2ols_A 440 N-ATELL--KNGQEVTVSCAEGDTGFIYAGL 467 (794)
T ss_dssp T-HHHHS--CSSCCEECCCC--CCCBCEECC
T ss_pred c-hhhcc--cCCCEEEEEecCCCcceEEeCC
Confidence 2 22222 47999998 66554454443
No 10
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=94.58 E-value=0.018 Score=68.63 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=64.0
Q ss_pred CceeeeceeEEEEEEEecccccccc-cccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeEE
Q 005627 234 CWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT 310 (687)
Q Consensus 234 ~wq~ispg~a~G~l~~v~~l~~~~~-~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a~ 310 (687)
.=..++||.+.|++++ ..++... ....+|.||++...+ -+++| ..+.||||..-. ..||.+|.||++|||-+.
T Consensus 397 ~G~~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~Vv 472 (876)
T 1vbg_A 397 TGLPASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETS-PEDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCVS 472 (876)
T ss_dssp ECEEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCC-TTSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEEE
T ss_pred cCcccCCCeEEEEEEE--CHHHHHHHhhccCCEEEEEcCCC-HHHHHhHhhccEEEECCCC-CccHHHHHHhHcCCCEEE
Confidence 3346799999999754 2222111 113567788887433 22232 158899998776 899999999999999865
Q ss_pred -ecchHHHH--------HhH-hcCCCeEEEEEcCCceEEee
Q 005627 311 -CFDQNILR--------NLR-LKEGKAVSIRLKSTNLIISD 341 (687)
Q Consensus 311 -~~d~~~~~--------~l~-~~~Gk~V~l~vs~~~~~~~~ 341 (687)
|.+.. ++ ... -.+|.+|.+.-+.+.+...+
T Consensus 473 G~~~~~-~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 512 (876)
T 1vbg_A 473 GCSGIR-VNDAEKLVTIGGHVLREGEWLSLNGSTGEVILGK 512 (876)
T ss_dssp CCTTEE-EEGGGTEEEETTEEEETTCEEEEETTTTEEEESC
T ss_pred cCCCce-eccccceEEeCCeeecCCCEEEEECCCCEEEECC
Confidence 44421 00 011 24688888876654444443
No 11
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=94.36 E-value=0.019 Score=68.40 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=64.1
Q ss_pred CCceeeeceeEEEEEEEecccccccc-cccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeE
Q 005627 233 GCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFA 309 (687)
Q Consensus 233 ~~wq~ispg~a~G~l~~v~~l~~~~~-~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a 309 (687)
..=..++||.++|++++ + .++... ....+|.||+....+ -+++| ..+.||||..-. ..||.+|.||++|||-+
T Consensus 392 ~~G~~as~G~a~G~vv~-~-~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~V 467 (873)
T 1kbl_A 392 GSALPASPGAAAGKVYF-T-ADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCCV 467 (873)
T ss_dssp EECEEEECSEEEEEEES-S-HHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEEE
T ss_pred ccCccccCceEEEEEEE-c-HHHHHHhhccCCCEEEEECCCC-HHHHHHHHhccEEEecCCC-CccHHHHHHhHcCCCEE
Confidence 34567899999999854 2 222111 113567788886432 22233 158899998776 89999999999999986
Q ss_pred E-ecchHHHH--------HhH-hcCCCeEEEEEcCCceEEe
Q 005627 310 T-CFDQNILR--------NLR-LKEGKAVSIRLKSTNLIIS 340 (687)
Q Consensus 310 ~-~~d~~~~~--------~l~-~~~Gk~V~l~vs~~~~~~~ 340 (687)
. |.+.. ++ ... -.+|..|.+.-+.+.+...
T Consensus 468 vG~~~~~-i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g 507 (873)
T 1kbl_A 468 SGCGEIK-INEEAKTFELGGHTFAEGDYISLDGSTGKIYKG 507 (873)
T ss_dssp ECCTTCE-EETTTTEEEETTEEEETTCEEEEETTTCEEEES
T ss_pred EcCCCce-ecccccEEEeCCeeecCCCEEEEECCCCEEEEC
Confidence 5 44421 00 011 2468888876665444443
No 12
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=93.67 E-value=0.06 Score=64.18 Aligned_cols=77 Identities=19% Similarity=0.259 Sum_probs=53.5
Q ss_pred CCceeeeceeEEEEEEEeccccccccc-ccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeE
Q 005627 233 GCWQVISPVEVCGFITSVNELITLQNK-VYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFA 309 (687)
Q Consensus 233 ~~wq~ispg~a~G~l~~v~~l~~~~~~-~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a 309 (687)
..=..+|||.++|++++ ..++.... ...+|.||++...+ -+++| ..+.||||..-. ..||.+|.||++|||-+
T Consensus 421 ~~G~~aspG~a~G~v~~--~~~~a~~~~~~ge~~ILV~~~t~-P~d~~~m~~a~GIvT~~GG-~TSHaAIvAR~lGiPaV 496 (913)
T 1h6z_A 421 GRGLAASPGAAVGQVVF--DAESAKEWSGRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCV 496 (913)
T ss_dssp EECEEEESCEEEEEEES--SHHHHHSTTTTSCCEEEEESSCC-GGGCTTTTTSSEEEESSCC-TTCHHHHHHHHTTCCEE
T ss_pred ccceecCCceEEEEEEE--CHHHHHHHHhcCCCEEEEECCCC-HHHHHhHHhceEEEEcCCC-cccHHHHHHHhcCCCEE
Confidence 34466899999999764 22222211 23566788886443 44455 269999998877 88999999999999976
Q ss_pred E-ecc
Q 005627 310 T-CFD 313 (687)
Q Consensus 310 ~-~~d 313 (687)
. |.+
T Consensus 497 vG~~~ 501 (913)
T 1h6z_A 497 SGCGD 501 (913)
T ss_dssp ECCTT
T ss_pred ECCcc
Confidence 5 444
No 13
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=93.60 E-value=0.37 Score=54.79 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=51.1
Q ss_pred CCCeEEEEecCCCccccC----CCceEEecCCCCCcchhhhhhhccCCceeEEecchHHHHHhHhcCCCeEEEEEcCCce
Q 005627 262 RRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNL 337 (687)
Q Consensus 262 ~~p~Ill~~~~~G~EeIp----~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~d~~~~~~l~~~~Gk~V~l~vs~~~~ 337 (687)
.+|.||+++..+ -++++ ..+.||||..-. ..||.++.||++|||-+.--. +....+ .+|..|.+.-..+.+
T Consensus 155 ~~~~ILVa~~l~-P~~~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvg~~-~~~~~~--~~G~~v~vDg~~G~V 229 (572)
T 2wqd_A 155 DESVVIVGNDLT-PSDTAQLNKEFVQGFATNIGG-RTSASAIMSRSLEIPAIVGTK-SITQEV--KQGDMIIVDGLNGDV 229 (572)
T ss_dssp SCCEEEEESCCC-HHHHTTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCS-SHHHHC--CTTCEEEEETTTTEE
T ss_pred CCCEEEEEcCCC-HHHHHhhChhceeEEEEcCCC-cccHHHHHHHHcCCCEEEech-hHHhhC--CCCCEEEEECCCCEE
Confidence 567888886433 11222 149999997766 899999999999999865332 122222 479999987766555
Q ss_pred EEeec
Q 005627 338 IISDI 342 (687)
Q Consensus 338 ~~~~~ 342 (687)
.+.+.
T Consensus 230 ~~~p~ 234 (572)
T 2wqd_A 230 IVNPT 234 (572)
T ss_dssp EESCC
T ss_pred EeCCc
Confidence 55443
No 14
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=93.53 E-value=0.34 Score=55.21 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=51.3
Q ss_pred cCCCeEEEEecCCCccccC----CCceEEecCCCCCcchhhhhhhccCCceeEE-ecchHHHHHhHhcCCCeEEEEEcCC
Q 005627 261 YRRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CFDQNILRNLRLKEGKAVSIRLKST 335 (687)
Q Consensus 261 ~~~p~Ill~~~~~G~EeIp----~~V~gVit~~~~~~LSHv~vrARn~gVp~a~-~~d~~~~~~l~~~~Gk~V~l~vs~~ 335 (687)
..+|.||+++..+= ++++ ..+.||||..-. ..||.++.||++|||-+. |.+ ....+ .+|+.|.+.-+.+
T Consensus 152 ~~~~~ILVa~~l~P-s~~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvG~~~--~~~~~--~~G~~v~vDg~~G 225 (575)
T 2hwg_A 152 IQDEVILVAADLTP-SETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS--VTSQV--KNDDYLILDAVNN 225 (575)
T ss_dssp CCSCEEEEESCCCH-HHHHTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCSC--HHHHC--CTTCEEEEETTTT
T ss_pred CCCCEEEEEcCCCH-HHHHHhCccceeEEEEcCCC-cccHHHHHHHHCCCCEEEcchh--HHhhC--CCCCEEEEECCCC
Confidence 35678888864331 1111 148999997766 899999999999999755 333 22222 4799999877665
Q ss_pred ceEEeec
Q 005627 336 NLIISDI 342 (687)
Q Consensus 336 ~~~~~~~ 342 (687)
.+.+.+.
T Consensus 226 ~V~~~p~ 232 (575)
T 2hwg_A 226 QVYVNPT 232 (575)
T ss_dssp EEEESCC
T ss_pred EEEeCCc
Confidence 5555443
No 15
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=91.03 E-value=0.13 Score=61.77 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=50.3
Q ss_pred ceeeeceeEEEEEEEe-cccccccccccCCCeEEEEecCCCccccCC--CceEEecCCCCCcchhhhhhhccCCceeEE-
Q 005627 235 WQVISPVEVCGFITSV-NELITLQNKVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT- 310 (687)
Q Consensus 235 wq~ispg~a~G~l~~v-~~l~~~~~~~~~~p~Ill~~~~~G~EeIp~--~V~gVit~~~~~~LSHv~vrARn~gVp~a~- 310 (687)
=-..|||.++|++++. ++..+.. ...++.||+.+. +--+++|- -..||||..=+ .-||.+|.||.+|||-+.
T Consensus 423 Gl~aspG~a~G~v~~~~~~~~~~~--~~~~g~ILV~~~-T~Pd~~p~M~~a~gIvT~~GG-~TSHAAIvAR~LGIPaVVG 498 (913)
T 2x0s_A 423 GLAASPGAAVGQVVFDAESAKEWS--GRGKKVIMVRLE-TSPEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSG 498 (913)
T ss_dssp CEEEESSEEEEEEESSHHHHHHHT--TTTCCEEEEESS-CCTTSHHHHTTSSEEEESSCC-TTCHHHHHHHTTTCCEEEC
T ss_pred ccccCCccceeeEEechhHHHHHh--hCCCceEEEcCC-CCHHHHHHHHHHHHHHHHccC-CCChHHHHHHHcCCCeecC
Confidence 4567999999998653 3333221 123455666653 22233331 58899998877 889999999999999854
Q ss_pred ecc
Q 005627 311 CFD 313 (687)
Q Consensus 311 ~~d 313 (687)
|.|
T Consensus 499 ~~~ 501 (913)
T 2x0s_A 499 CGD 501 (913)
T ss_dssp CTT
T ss_pred cch
Confidence 544
Done!