Query 005627
Match_columns 687
No_of_seqs 231 out of 1242
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 02:53:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005627.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005627hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h6za3 d.142.1.5 (A:1-405) Py 100.0 3.2E-37 2.3E-41 334.5 12.0 268 370-686 3-366 (405)
2 d1vbga3 d.142.1.5 (A:3-382) Py 100.0 3E-35 2.2E-39 316.3 -5.9 274 380-686 18-340 (380)
3 d1kbla3 d.142.1.5 (A:2-376) Py 100.0 1.4E-34 9.9E-39 309.3 -5.5 283 371-686 2-338 (375)
4 d1zyma2 c.8.1.2 (A:3-21,A:145- 97.8 7.3E-06 5.3E-10 73.3 5.3 99 237-341 4-106 (124)
5 d1h6za2 c.8.1.1 (A:406-537) Py 96.4 0.0016 1.2E-07 58.2 5.6 73 236-312 18-93 (132)
6 d1vbga2 c.8.1.1 (A:383-517) Py 96.2 0.0017 1.3E-07 58.2 4.4 73 236-312 17-92 (135)
7 d1kbla2 c.8.1.1 (A:377-509) Py 95.8 0.0018 1.3E-07 57.9 2.7 75 236-313 20-97 (133)
8 d2hi6a1 c.8.2.3 (A:1-132) Hypo 93.4 0.11 8E-06 45.9 8.2 96 236-338 6-129 (132)
9 d1a9xa6 d.142.1.2 (A:677-935) 28.4 25 0.0018 33.2 4.8 37 649-685 130-168 (259)
10 d2di0a1 a.5.2.4 (A:8-70) Activ 19.4 55 0.004 24.4 4.0 53 9-75 2-54 (63)
No 1
>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00 E-value=3.2e-37 Score=334.47 Aligned_cols=268 Identities=18% Similarity=0.197 Sum_probs=178.3
Q ss_pred CceeeeCC----CCCC---CCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhcc-chhHHHHHHHHHhhhC--
Q 005627 370 GKYAVSVE----DFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISRLYKFIN-- 439 (687)
Q Consensus 370 ~~~vl~l~----e~~~---~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~~-~~~l~~~l~~l~~~~~-- 439 (687)
.+|+++|+ +.+. ++||||++||++|.+ .|++||+|||||+.+|++|++.|. ++.+++.|......++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~---~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~ 79 (405)
T d1h6za3 3 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 79 (405)
T ss_dssp CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCcccCCcchHhhccHHHHHHHHHHH---CcCCCCCCEEehHHHHHHHHHcCCCcHHHHHHHHHHHHhhhHH
Confidence 46899996 5443 589999999999988 699999999999999999998862 3445444433221110
Q ss_pred ----CCCh-------------HHH--------------HHHHHHHHcCCCCHHHHHHHHHHHHh------cCCC------
Q 005627 440 ----GGDL-------------SKL--------------QEIQEAVLQMSAPLSLIYELKNKMRS------SGMP------ 476 (687)
Q Consensus 440 ----~~d~-------------~~l--------------~~ir~~I~~~~lP~el~~~L~~a~rS------sg~~------ 476 (687)
.++. ... ...+.+.....-++.........+.. .+.+
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 159 (405)
T d1h6za3 80 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 159 (405)
T ss_dssp HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred hhhhhccccchhhhhcccccchhhhhhhhhhhhhhhhhhhHHHHHHhcccchhhHHHHHHHHHHhhcccccccchhHHHH
Confidence 0000 000 11222222222222222222111100 0000
Q ss_pred -----------------------------------CCCC----ccHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCC--
Q 005627 477 -----------------------------------WPGD----EGWNLAWRSIKKVWASKWNERAFISCRKANLNHDN-- 515 (687)
Q Consensus 477 -----------------------------------~aG~----~~~e~l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~-- 515 (687)
..|. .+++++..+|+.||+|+|++||..||..++++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~ 239 (405)
T d1h6za3 160 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGT 239 (405)
T ss_dssp TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCC
T ss_pred HHHHHHHhccccccccCcHHHHHHHHHHHHHhhhhhcCCcccccchHHhHHHHHHHHhhhcCchHHHHHHhcCccchhhh
Confidence 0111 14789999999999999999999999999999742
Q ss_pred --cceeEEEEeecCCceeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceEEEecCCCCCCccccccccccccC
Q 005627 516 --LCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 593 (687)
Q Consensus 516 --~~MAVLVQemV~a~~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~~~ 593 (687)
..|+|++|+|+.+..+||+||.||.+|+.+.+.+++++|+|+.+|+|.. +|+.|..++.... . +
T Consensus 240 ~~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~-~~~~~~~~~~~~~---~-----~----- 305 (405)
T d1h6za3 240 AVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLRW---A-----K----- 305 (405)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCS-CCEESSHHHHHHH---H-----T-----
T ss_pred hheeeeeeecccccccccccccccCCCCCCCceeeEecccCcceeeccCcc-CCceeeeecccch---h-----h-----
Confidence 3455555556667789999999999999999999999999999999987 7776654442210 0 0
Q ss_pred CCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEE
Q 005627 594 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 673 (687)
Q Consensus 594 ~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEwai 673 (687)
. .++ . ......++...+.+++++ +++|+++|.+||++||+|||||||+
T Consensus 306 -~-------------------~~~------~-~~~~~~~~~~~~~l~~e~-----~~~La~l~~~iE~~fg~PqDIEWAi 353 (405)
T d1h6za3 306 -A-------------------HGV------G-EEERRKRYPSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEFTV 353 (405)
T ss_dssp -T-------------------SSC------C-HHHHHHHSCCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred -c-------------------ccc------c-eecccccccchhhcCHHH-----HHHHHHHHHHHHHHcCCCcceEEEE
Confidence 0 000 0 000001112223345554 7899999999999999999999999
Q ss_pred ECCeEEEEeeccC
Q 005627 674 KDGLIYVVQARPQ 686 (687)
Q Consensus 674 ~~g~L~IlQsRP~ 686 (687)
++|+|||||+||.
T Consensus 354 ~dg~L~ILQaRPv 366 (405)
T d1h6za3 354 QDGRLWLLQCRNG 366 (405)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEccCC
Confidence 9999999999995
No 2
>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]}
Probab=99.97 E-value=3e-35 Score=316.28 Aligned_cols=274 Identities=14% Similarity=0.090 Sum_probs=163.9
Q ss_pred CCCCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhcc--chhHHHHHHHHHhhhCC------CC---------
Q 005627 380 TPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI--NKDIANKISRLYKFING------GD--------- 442 (687)
Q Consensus 380 ~~~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~~--~~~l~~~l~~l~~~~~~------~d--------- 442 (687)
+.++||||++||++|.+ .|||||+|||||+.+|++||++|. +.+|++.|....+.+.. .+
T Consensus 18 ~~~lvGGK~AnLgel~~---~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~~~~~~~~~~~~~~~ 94 (380)
T d1vbga3 18 MKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMGATLGDPQRPLLLSV 94 (380)
T ss_dssp CTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHTCBTTCSSSBCCEEE
T ss_pred hHhhCcHHHHHHHHHHH---CcCCCCCCEEeeHHHHHHHHHcCccccHHHHHHHHHHHHHHHHhhcccccccccchhhcc
Confidence 35799999999999988 699999999999999999999862 34677776654322210 00
Q ss_pred ----hH------------HHHHHHHHHHcCCCCHHHHHHHHHHHHhc-CCCCCCCc-----------cHHHHHHHHHHHH
Q 005627 443 ----LS------------KLQEIQEAVLQMSAPLSLIYELKNKMRSS-GMPWPGDE-----------GWNLAWRSIKKVW 494 (687)
Q Consensus 443 ----~~------------~l~~ir~~I~~~~lP~el~~~L~~a~rSs-g~~~aG~~-----------~~e~l~~AIk~VW 494 (687)
.. .+.............+++...-...+.++ .....+.. .......+++.+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (380)
T d1vbga3 95 RSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEHMKESKGLKNDTDLT 174 (380)
T ss_dssp ECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTCSSGGGCC
T ss_pred cccchhhhhHhHHHHHhcccchHHHHHHhhccccchHhhhhhhhhhccchhcccchhhhHHHHHHHHHHhhcchhhhhcc
Confidence 00 00000111111111111111110000000 00111211 0122233444455
Q ss_pred hcCCChH----HHHHHHHcCCCCCCcceeEEEEeecCCceeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceE
Q 005627 495 ASKWNER----AFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSF 570 (687)
Q Consensus 495 AS~f~~R----A~~yR~~~Gi~~~~~~MAVLVQemV~a~~SGVlfT~nP~tg~~~~i~iea~~GLGE~lVsG~~G~p~~f 570 (687)
+|.|+.+ +..|+..+|.+ ..|+|++|.|+.++.+||+||.||.+++.+.+.|+++||+|+.+|+|.. .++.|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~Glg~~vv~g~~-~~~~~ 250 (380)
T d1vbga3 175 ASDLKELVGQYKEVYLSAKGEP---FPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVNVQCMVF-GNMGN 250 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSC---CCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEEEEECCC-SCSST
T ss_pred HHHhhhHHHHHHHHhhhhcCCc---cccchHHHHHHhhhheeecccCCcccccccceeeccccccceeeeeeee-cCCCc
Confidence 5555544 44555555544 4689999999999999999999999999999999999999999999886 56554
Q ss_pred EEecCCCCCCccccccccccccCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHH
Q 005627 571 VTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFS 650 (687)
Q Consensus 571 ~v~k~~~~~~~vl~~~sk~i~~~~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~~~l~d~~~r~~~l~ 650 (687)
.+.+..... . ...++.+ +....+.....+. .+ ....+.+. +....++++|++ ++
T Consensus 251 ~~~~~~~~~---~---~~~~g~~-~~~~~~~~~~~~~-------~~-~~~~~~~~------~~~~~~~l~~~~-----~~ 304 (380)
T d1vbga3 251 TSGTGVLFT---R---NPNTGEK-KLYGEFLVNAQGE-------DV-VAGIRTPE------DLDAMKNLMPQA-----YD 304 (380)
T ss_dssp TCEEEEEES---S---CTTTCCS-SCEEEEEESSCHH-------HH-HHTSCCCE------ETHHHHHHCHHH-----HH
T ss_pred EecCccccc---c---ccccCcc-eeeeeeccccccc-------cc-cceeeccc------ccchhhhcCHHH-----HH
Confidence 443322110 0 1111111 1111111110000 01 01111111 124557888876 78
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEEECCeEEEEeeccC
Q 005627 651 KIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 686 (687)
Q Consensus 651 ~La~lg~~IE~~fG~PQDIEwai~~g~L~IlQsRP~ 686 (687)
+|++++.+||+|||+|||||||+++|+|||||+||.
T Consensus 305 ~La~l~~~iE~~yg~PqDIEWA~~dg~L~ILQaRPv 340 (380)
T d1vbga3 305 ELVENCNILESHYKEMQDIEFTVQENRLWMLQCRTG 340 (380)
T ss_dssp HHHHHHHHHHHHHCSCEEEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCcceeEEEEECCEEEEEEccCC
Confidence 999999999999999999999999999999999995
No 3
>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}
Probab=99.97 E-value=1.4e-34 Score=309.33 Aligned_cols=283 Identities=12% Similarity=0.055 Sum_probs=172.8
Q ss_pred ceeeeCCCCCC---CCcCHHhHhHHHHhhhCCCCccCCCceeeCHHHHHHHHHhcc--chhHHHHHHHHHhhhCC----C
Q 005627 371 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI--NKDIANKISRLYKFING----G 441 (687)
Q Consensus 371 ~~vl~l~e~~~---~~vG~KAanLa~L~~~~p~~~~VP~GfvIpf~af~~~L~~~~--~~~l~~~l~~l~~~~~~----~ 441 (687)
+||+||+|.+. ++||||++||++|.+ .|||||+|||||+.+|++||+.|. ..++.+.|......++. .
T Consensus 2 k~v~~f~e~~~~d~~lvGGK~AnLgel~~---~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~~l~~l~~~~~~~ 78 (375)
T d1kbla3 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (375)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CEEEECCCCCchhhhcCcHHHHHHHHHHH---CcCCCCCCEEecHHHHHHHHHhcccCcHHHHHHHHHHHHhhhhhcCcc
Confidence 79999999865 689999999999998 699999999999999999998862 24566665544322210 0
Q ss_pred --Ch-----------------H--------H-HHHHHHHHHcCCCCHHHHHHHH-HHHHhcC---CCCCCCccHHH----
Q 005627 442 --DL-----------------S--------K-LQEIQEAVLQMSAPLSLIYELK-NKMRSSG---MPWPGDEGWNL---- 485 (687)
Q Consensus 442 --d~-----------------~--------~-l~~ir~~I~~~~lP~el~~~L~-~a~rSsg---~~~aG~~~~e~---- 485 (687)
.. . . ..............++....-. ....+.. ...+. .....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~ 157 (375)
T d1kbla3 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPK-SHFEKIIDA 157 (375)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHH
T ss_pred ccccccchhhccccccccccchhhhhHhhhhccchhhhhHhhhccchhhhcccchhhhhhhhhhccchhh-hHHHHHHHh
Confidence 00 0 0 0001111111111111110000 0000000 00000 00111
Q ss_pred ---------HHHHHHHHHhcCCChHHHHHHHHcCCCCCCcceeEEEEeecCCceeEEEEecCCCCCCCCcEEEEeecCCc
Q 005627 486 ---------AWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLG 556 (687)
Q Consensus 486 ---------l~~AIk~VWAS~f~~RA~~yR~~~Gi~~~~~~MAVLVQemV~a~~SGVlfT~nP~tg~~~~i~iea~~GLG 556 (687)
....+..||+ +..+++.|+.+.+++.....|+|++|.|+.+..+||+||.||.+++.+.+.++.++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~~~~~~~i~~~~glg 235 (375)
T d1kbla3 158 MKEEKGVHFDTDLTADDLK--ELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTA 235 (375)
T ss_dssp HHHHTCCCSGGGCCHHHHH--HHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCE
T ss_pred hhhccchHHHHHhHHHHHH--HHHHHHHHHHHHhhcCCcccccceeeeeeeeeeeEEeccccccccccceeecccccccc
Confidence 1112233444 45677888888889888999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCceEEEecCCCCCCccccccccccccCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCC
Q 005627 557 ETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRD 636 (687)
Q Consensus 557 E~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~i~~~~~~~~i~~~dsngedle~~~g~Gl~~~vp~~~~~~~~~dy~~~ 636 (687)
+.+|+|.. .++.|.+.+.... +. ...++.+ +....+.....++ .+ +... ...-++.+.
T Consensus 236 ~~vv~~~~-~~~~~~~~~~~~~---~~---~~~~~~~-~~~~~~~~~~~~~-------~~----~~~~---~~~~~~~~~ 293 (375)
T d1kbla3 236 VNVQTMVF-GNKGETSGTGVAF---TR---NPSTGEK-GIYGEYLINAQGE-------DV----VAGV---RTPQPITQL 293 (375)
T ss_dssp EEEEECCC-TTSSTTCEEEEEE---EE---CTTTCCE-EEEEEEEESCCHH-------HH----HHTS---SCCEEGGGH
T ss_pred ceeecccc-cCCCccccccccc---cc---Ccccccc-ccccceeeccccc-------cc----ccce---ecccccccc
Confidence 99999876 4554444332110 00 1111111 0011111111000 00 0000 001112345
Q ss_pred CCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEEECCeEEEEeeccC
Q 005627 637 PMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 686 (687)
Q Consensus 637 ~~l~d~~~r~~~l~~La~lg~~IE~~fG~PQDIEwai~~g~L~IlQsRP~ 686 (687)
+++++++ +++|+++|.+||+|||+|||||||+++|+|||||+||.
T Consensus 294 ~~l~~~~-----~~eLa~~a~~iE~~yG~PqDIEWAi~dG~l~ILQaRPv 338 (375)
T d1kbla3 294 ENDMPDC-----YKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRNG 338 (375)
T ss_dssp HHHCHHH-----HHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEEC
T ss_pred hhcCcHH-----HHHHHHHHHHHHHHhCCcceeEEEEECCEEEEEEccCC
Confidence 6677765 78999999999999999999999999999999999996
No 4
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]}
Probab=97.82 E-value=7.3e-06 Score=73.31 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=68.4
Q ss_pred eeeceeEEEEEEEeccc-ccccccccCCCeEEEEecCCCccc--cC-CCceEEecCCCCCcchhhhhhhccCCceeEEec
Q 005627 237 VISPVEVCGFITSVNEL-ITLQNKVYRRPTIIIASRITGEEE--IP-VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCF 312 (687)
Q Consensus 237 ~ispg~a~G~l~~v~~l-~~~~~~~~~~p~Ill~~~~~G~Ee--Ip-~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~ 312 (687)
..|||.+.|+++++..- .+.. .+.+++||+++..+=.+- ++ ..+.||||..-. ..||.++.||.+|||.+.--
T Consensus 4 ~as~G~~~G~v~~~~~~~~~~~--~~~~~~ILV~~~l~P~~~~~l~~~~v~Giit~~Gg-~tSH~AIlAR~lgIP~vvg~ 80 (124)
T d1zyma2 4 LASPGIAFGKALLLKEKIIDLS--AIQDEVILVAADLTPSETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGT 80 (124)
T ss_dssp CSBCCCEEEEEEECCCCCCCGG--GCCSCEEEECSCCCHHHHHHSCGGGEEEEECSCCC-SSSHHHHHHHHHTCCEECCC
T ss_pred CCCCeEEEEEEEEECCcHHHHH--hCCCCEEEEEccCCHHHHhhhChhheEEEEEecCC-cccHHHHHHHHcCCCEEEEc
Confidence 56899999999887642 2322 346788999874332211 11 269999997665 99999999999999997643
Q ss_pred chHHHHHhHhcCCCeEEEEEcCCceEEee
Q 005627 313 DQNILRNLRLKEGKAVSIRLKSTNLIISD 341 (687)
Q Consensus 313 d~~~~~~l~~~~Gk~V~l~vs~~~~~~~~ 341 (687)
.. ..+.+ .+|+.|.+......+.+.+
T Consensus 81 ~~-~~~~i--~~g~~v~vDg~~G~v~~~P 106 (124)
T d1zyma2 81 GS-VTSQV--KNDDYLILDAVNNQVYVNP 106 (124)
T ss_dssp SC-HHHHC--CTTCEEEECCSSCCEEESC
T ss_pred cc-HHHHh--cCCCEEEEECCCCEEEECC
Confidence 31 23322 4899988877766666654
No 5
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]}
Probab=96.41 E-value=0.0016 Score=58.20 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=52.3
Q ss_pred eeeeceeEEEEEEE-ecccccccccccCCCeEEEEecCCCccccC--CCceEEecCCCCCcchhhhhhhccCCceeEEec
Q 005627 236 QVISPVEVCGFITS-VNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCF 312 (687)
Q Consensus 236 q~ispg~a~G~l~~-v~~l~~~~~~~~~~p~Ill~~~~~G~EeIp--~~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~ 312 (687)
...+||.+.|++++ ++...+... ..+..||++... --+.+| ..+.||||..-. .+||.++-||++|+|-+..-
T Consensus 18 ~~as~G~~~G~v~~~~~~~~~~~~--~~~~~ILV~~~t-~p~~~~~~~~a~givte~GG-~tSHaAivARelgiP~VvG~ 93 (132)
T d1h6za2 18 LAASPGAAVGQVVFDAESAKEWSG--RGKKVIMVRLET-SPEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSGC 93 (132)
T ss_dssp EEEESCEEEEEEESSHHHHHSTTT--TSCCEEEEESSC-CGGGCTTTTTSSEEEESSCC-TTCHHHHHHHHTTCCEEECC
T ss_pred ecCCCCeEEEEEEEechhHHHHhh--ccCCeEEEeccC-Cchhhhhhhhhccceecccc-cchHHHHHHhhcCCceEecc
Confidence 45799999999876 455444332 234557777643 333444 268999998877 89999999999999997643
No 6
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]}
Probab=96.17 E-value=0.0017 Score=58.24 Aligned_cols=73 Identities=19% Similarity=0.250 Sum_probs=51.8
Q ss_pred eeeeceeEEEEEEEecc-cccccccccCCCeEEEEecCCCccccCC--CceEEecCCCCCcchhhhhhhccCCceeEEec
Q 005627 236 QVISPVEVCGFITSVNE-LITLQNKVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFATCF 312 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~-l~~~~~~~~~~p~Ill~~~~~G~EeIp~--~V~gVit~~~~~~LSHv~vrARn~gVp~a~~~ 312 (687)
...|||.+.|+++++.+ ..+... ..+..||++...+ -+.+|- ...||||..-. .+||-++-||++|+|-+.--
T Consensus 17 ~~as~G~~~G~v~~~~~~~~~~~~--~~~g~ILV~~~t~-p~~~~~m~~a~gIVte~GG-~tSHaAivARelgiP~VvG~ 92 (135)
T d1vbga2 17 LPASPGAAVGQVVFTAEDAEAWHS--QGKAAILVRAETS-PEDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCVSGC 92 (135)
T ss_dssp EEEECSEEEEEEESSHHHHHHHHH--TTCCEEEEESCCC-TTSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEEECC
T ss_pred eccCCCeEEEEEEEEchhHHHhhh--ccCceEEEEccCC-HHHhhhhhheeEEEEecCC-ccchHHHHHHhcCCceEecc
Confidence 35699999999987643 333322 2445688877433 223331 58899998877 89999999999999996543
No 7
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]}
Probab=95.80 E-value=0.0018 Score=57.95 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=50.5
Q ss_pred eeeeceeEEEEEEEecccccccccccCCCeEEEEecCCCccccCC--CceEEecCCCCCcchhhhhhhccCCceeEE-ec
Q 005627 236 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CF 312 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~l~~~~~~~~~~p~Ill~~~~~G~EeIp~--~V~gVit~~~~~~LSHv~vrARn~gVp~a~-~~ 312 (687)
...|||.+.|+++++....+.. ....+..||+.. -.--+.+|. ...||||..-. ..||-++-||++|+|-+. |.
T Consensus 20 ~~aspG~a~G~v~~~~~~~~~~-~~~~~~~ILv~~-~t~p~~~~~~~~a~givte~GG-~tSHaAivaRelGiP~VvG~~ 96 (133)
T d1kbla2 20 LPASPGAAAGKVYFTADEAKAA-HEKGERVILVRL-ETSPEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCCVSGCG 96 (133)
T ss_dssp EEEECSEEEEEEESSHHHHHHH-HHTTCCEEEEES-SCCGGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEEEECCT
T ss_pred ccCCCCcEEEEEEEeehHHHHH-hccCCCeEEEec-cCCchhhhhhheeeEEEEecCc-ccccHHHhhhhcCccEEEecc
Confidence 5679999999998765333211 112334455554 233334442 57899998877 899999999999999954 44
Q ss_pred c
Q 005627 313 D 313 (687)
Q Consensus 313 d 313 (687)
+
T Consensus 97 ~ 97 (133)
T d1kbla2 97 E 97 (133)
T ss_dssp T
T ss_pred c
Confidence 4
No 8
>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.42 E-value=0.11 Score=45.88 Aligned_cols=96 Identities=13% Similarity=0.139 Sum_probs=63.6
Q ss_pred eeeeceeEEEEEEEeccc-c----------------cccccccCCCeEEEEecCCCccccCCCc-----------eEEec
Q 005627 236 QVISPVEVCGFITSVNEL-I----------------TLQNKVYRRPTIIIASRITGEEEIPVGV-----------VAVLT 287 (687)
Q Consensus 236 q~ispg~a~G~l~~v~~l-~----------------~~~~~~~~~p~Ill~~~~~G~EeIp~~V-----------~gVit 287 (687)
..+++|.+.|.+.+.+.- . +..+..+ .-+||++....|.-. |..| +|+|.
T Consensus 6 ~~i~~G~~~G~alv~~~p~Sf~ggvd~~tGii~~~h~l~g~~~-~gkILv~p~~~gSt~-~~~vl~~~~~~g~aPaA~I~ 83 (132)
T d2hi6a1 6 RAITRGRAEGEALVTKEYISFLGGIDKETGIVKEDCEIKGESV-AGRILVFPGGKGSTV-GSYVLLNLRKNGVAPKAIIN 83 (132)
T ss_dssp EESSCCEEEEEEEECCSCCCTTSCBCTTTCBBCSCSSSTTCBC-TTSEEEESCCSCCSS-CTTHHHHHHHHTCSCSEEEE
T ss_pred EEeeccEEEEEEEEECCCcccccccCCCccEEecCccccCccc-cCcEEEeecCCCCcc-hHHHHHHHHHcCCCcceEEE
Confidence 468999999998887642 1 1111112 345999987666543 3322 45554
Q ss_pred CCCCCcchhhhhhhccCCceeEEecchHHHHHhHhcCCCeEEEEEcCCceE
Q 005627 288 PDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLI 338 (687)
Q Consensus 288 ~~~~~~LSHv~vrARn~gVp~a~~~d~~~~~~l~~~~Gk~V~l~vs~~~~~ 338 (687)
.+.-..+||=++-|| +|.+...+.+..+.| .+|.+|++..+..-+.
T Consensus 84 ~~~~~il~~gaIvA~---iP~v~~~~~~~~~~l--~~Gd~V~vdg~~G~V~ 129 (132)
T d2hi6a1 84 KKTETIIAVGAAMAE---IPLVEVRDEKFFEAV--KTGDRVVVNADEGYVE 129 (132)
T ss_dssp SSCCHHHHHHHHHHT---CCEEECCCTHHHHHC--CTTSEEEEETTTTEEE
T ss_pred EcCCCccchhhhhcc---CceEEecCchHhhcc--cCCCEEEEECCCCEEE
Confidence 454559999999997 899999987766654 5899999876554443
No 9
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=28.39 E-value=25 Score=33.22 Aligned_cols=37 Identities=8% Similarity=0.155 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhcC--CCeeEEEEEECCeEEEEeecc
Q 005627 649 FSKIAETGKIIESLYG--YPQDIEGVLKDGLIYVVQARP 685 (687)
Q Consensus 649 l~~La~lg~~IE~~fG--~PQDIEwai~~g~L~IlQsRP 685 (687)
.+++.+.+.+|-+.+| .+--|||+++++++|++...|
T Consensus 130 ~~~l~~~a~kia~~l~~~G~~~vef~v~~~~~y~iEvNp 168 (259)
T d1a9xa6 130 QDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNP 168 (259)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEEECSSCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhhccceeEEEEEECCEEEEEEccc
Confidence 6889999999999987 589999999999999999876
No 10
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.37 E-value=55 Score=24.36 Aligned_cols=53 Identities=17% Similarity=0.209 Sum_probs=38.7
Q ss_pred ccccHHHHHHHHhcCCCccccCCCCCCchhHHHHHHHHHhhcCCCChhHHhHHHHHHhhhhcccccC
Q 005627 9 SGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGT 75 (687)
Q Consensus 9 ~g~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~l~~~~~~ 75 (687)
+|++|||.+..+. .+.| .+..| .+...|+| =+.|++.+.++++|- .|.|-++.
T Consensus 2 ~~vel~s~I~qV~------Dl~P--dLG~G---Fi~~~L~~-Y~~n~E~vI~~lLe~--~Lpp~L~~ 54 (63)
T d2di0a1 2 CGVELDSLISQVK------DLLP--DLGEG---FILACLEY-YHYDPEQVINNILEE--RLAPTLSQ 54 (63)
T ss_dssp SSHHHHHHHHHHH------HHCC--SSCHH---HHHHHHHH-TTTCHHHHHHHHHTT--CCCTTTTT
T ss_pred chhHHHHHHHHHH------HHcC--CCcHH---HHHHHHHH-hCCCHHHHHHHHHcc--CCCHHHHh
Confidence 6999999998844 2223 35556 77888888 466899999999994 47666654
Done!