Query 005629
Match_columns 687
No_of_seqs 236 out of 484
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 02:56:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qsf_A RAD4, DNA repair protei 100.0 5.5E-88 1.9E-92 755.2 26.7 356 147-687 6-416 (533)
2 1x3z_A Peptide: N-glycanase; h 99.9 5.9E-27 2E-31 247.1 17.3 109 486-607 211-319 (335)
3 2f4m_A Peptide N-glycanase; gl 99.9 1.2E-21 4.2E-26 204.8 17.7 108 486-605 170-279 (295)
4 3isr_A Transglutaminase-like e 95.6 0.012 4.1E-07 61.6 5.8 82 199-291 122-203 (293)
5 3kd4_A Putative protease; stru 93.0 0.083 2.8E-06 59.0 5.4 84 200-291 225-309 (506)
6 1ex0_A Coagulation factor XIII 85.7 1.1 3.6E-05 52.3 6.9 37 258-294 299-339 (731)
7 1vjj_A Protein-glutamine gluta 85.0 1 3.5E-05 52.2 6.2 28 267-294 270-297 (692)
8 1g0d_A Protein-glutamine gamma 84.1 0.71 2.4E-05 53.4 4.5 28 267-294 270-297 (695)
9 2q3z_A Transglutaminase 2; tra 82.2 0.71 2.4E-05 53.5 3.5 28 266-293 274-301 (687)
10 3isr_A Transglutaminase-like e 49.5 8.6 0.00029 39.9 3.0 22 484-510 213-234 (293)
11 3d9w_A Putative acetyltransfer 24.3 46 0.0016 34.4 3.5 24 268-291 81-104 (293)
12 3lnb_A N-acetyltransferase fam 22.8 52 0.0018 34.5 3.5 33 259-291 88-121 (309)
13 2ija_A Arylamine N-acetyltrans 21.6 53 0.0018 33.8 3.3 34 258-291 61-95 (295)
14 2bsz_A Arylamine N-acetyltrans 21.5 54 0.0018 33.6 3.3 24 268-291 72-95 (278)
15 1e2t_A NAT, N-hydroxyarylamine 21.2 60 0.0021 33.3 3.6 34 258-291 60-94 (284)
16 1w5r_A Arylamine N-acetyltrans 20.9 57 0.0019 33.4 3.3 33 259-291 62-95 (278)
17 1w4t_A Arylamine N-acetyltrans 20.7 60 0.0021 33.6 3.5 34 258-291 81-115 (299)
18 2vfb_A Arylamine N-acetyltrans 20.6 58 0.002 33.3 3.3 33 259-291 59-92 (280)
No 1
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A*
Probab=100.00 E-value=5.5e-88 Score=755.24 Aligned_cols=356 Identities=21% Similarity=0.353 Sum_probs=284.8
Q ss_pred CCCCCeEEEEecCCc--cc--cccccccCHHHHHHHHHHHHHHHHHHHHhhHHHHhhcCcHHHHHHHhhcCchhhhcccC
Q 005629 147 SDIKGVTIEFDAADS--VT--KKPVRRASAEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISE 222 (687)
Q Consensus 147 ~~~~~leI~l~~~~~--~k--K~~~RR~s~~eKe~r~~~HKvHLLCLLah~~~RN~wcnd~~lqa~llSlLP~~~~~~~~ 222 (687)
.+.++|+|||+.+.. .+ ++..+.+|++||++|+++|||||||||+||++||+||||++||++|+|+||.++.+.++
T Consensus 6 ~~~~~l~itl~~~~~~~~~~~~~~kk~~S~~ER~~R~~~Hk~hvl~LL~H~~~RN~W~nD~~lq~~L~sllP~~i~~~l~ 85 (533)
T 2qsf_A 6 AGVEDISVEIKPSSKRNSDARRTSRNVCSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEKVFELLH 85 (533)
T ss_dssp ---------------------CCCTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHGGGSCHHHHHHTS
T ss_pred CCCCCeEEEecCCccccchhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhCCHHHHHhhC
Confidence 356889999998632 21 12223489999999999999999999999999999999999999999999999976654
Q ss_pred cc----------hhhHhhhhHHHHHhhhceeeccCCC---ccc----------------ch--HHHHHHHHHHhcCCHHH
Q 005629 223 VS----------KLTANALSPIVSWFHDNFHVRSSVS---TRR----------------SF--HSDLAHALESREGTPEE 271 (687)
Q Consensus 223 ~~----------~~~~~~L~~L~~Wf~~~F~vt~~~~---~~~----------------~~--~~~l~~~l~~~~GSrD~ 271 (687)
+. +.++++|++|+.||+.+|+|+++.. ... .+ ..+|+.+|++++||+|+
T Consensus 86 p~~~~~~~~~~~~~~~~~Lk~L~~ww~~~F~it~p~~~~g~~~~~w~e~~~~~~~~~~f~~~~~~~f~~~~~~~~Gs~d~ 165 (533)
T 2qsf_A 86 PQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNEGLYMRTWKEIEMSANNKRKFKTLKRSDFLRAVSKGHGDPDI 165 (533)
T ss_dssp CCCCSSCTHHHHHHHHHHHHHHHHHHHHHCCEECCCSSCTTSCCCHHHHHHTTTTCCCEECCCHHHHHHHHHHTEECHHH
T ss_pred cCCCccccccchHHHHHHHHHHHHHHHhhEEEcCCccCCCccccCccccchhhccccccccccHHHHHHHHHhcCCChhH
Confidence 31 1246899999999999999998621 110 01 36899999999999999
Q ss_pred HHHHHHHHHHhcCCceeEEEeeccccCCcccccccCCCCCCCCCCCCccCCCCccccCccccccCCCCcccccccccccc
Q 005629 272 IAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCE 351 (687)
Q Consensus 272 gAqLF~ALLRALgL~aRLV~SLqpl~lk~~~~k~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~p~k~~~~~~~~~~~~ 351 (687)
+||||||||||||++||||+||||++|.+. +.. .++
T Consensus 166 ~AqlF~aLlRalG~~aRlV~SLqP~~f~~~--k~~----------------------------~~~-------------- 201 (533)
T 2qsf_A 166 SVQGFVAMLRACNVNARLIMSCQPPDFTNM--KID----------------------------TSL-------------- 201 (533)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECCCCTTCC--BSC----------------------------CCC--------------
T ss_pred HHHHHHHHHHHCCCceEEEecccccccccc--ccc----------------------------cCc--------------
Confidence 999999999999999999999999998862 100 000
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCccccCCCcccCCCcchhhhhhccCChHHHHHHHHHhhhccc
Q 005629 352 TSSKGSPECKYSSPKSNNTQSKKSPVSCELSSGNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 431 (687)
Q Consensus 352 ~~~~~~~~~~~~~~k~~~~~s~~~~~s~~~~~~~~~~~~~~~~~s~~e~~~s~~~~~~~rR~g~~~fe~q~~~al~~t~~ 431 (687)
.+ ...
T Consensus 202 -------------~k----------------------------------~~~---------------------------- 206 (533)
T 2qsf_A 202 -------------NG----------------------------------NNA---------------------------- 206 (533)
T ss_dssp -------------C-------------------------------------C----------------------------
T ss_pred -------------cc----------------------------------CCc----------------------------
Confidence 00 000
Q ss_pred cccCCcccccccccCCCCCCccccccccccccCCCCccccCcccccCCCCCCCCceEEEEEeCcCCCCCceEEEecccC-
Q 005629 432 ATSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANA- 510 (687)
Q Consensus 432 ~~~~s~~~~~~~~~~~~~~~~~~~k~~kk~~~~~s~~~~~~~s~~~~~~~~~~P~fW~EV~~~~~~~~~kWI~VDpv~~- 510 (687)
.+.++.||+||+|||++. .++||||||+++
T Consensus 207 ----------------------------------------------~~~~~~~P~~W~EV~s~~---~~rWi~VDp~~~~ 237 (533)
T 2qsf_A 207 ----------------------------------------------YKDMVKYPIFWCEVWDKF---SKKWITVDPVNLK 237 (533)
T ss_dssp ----------------------------------------------HHHHTTSCSEEEEEEETT---TTEEEEEESSSSC
T ss_pred ----------------------------------------------cccccCCCeEEEEEEEcC---CCeEEEEeccccc
Confidence 011235899999999986 489999999985
Q ss_pred cc---ccchhhHHhH--hhcCCCeeEEEEEcCCC-cccchhhhhhhhhh-hccccCC-----HHHHHHHHHHhhccccCC
Q 005629 511 II---DGEQKVEAAA--AACKTSLRYIVAFAGCG-AKDVTRRYCMKWYR-IASKRVN-----SAWWDAVLAPLRELESGA 578 (687)
Q Consensus 511 ~V---~~~~~~Ep~~--~~~~~~m~YVVAfd~dG-akDVT~RY~~~~~~-~~r~Rv~-----~~Ww~~~L~~~~~~~~~~ 578 (687)
+| +.+..|||.. ..+.++|+|||||++|| |+|||+||+.+|.. +++.|+. +.||.++|+.|+++
T Consensus 238 ~id~~~~~~~~Ep~~~~~~~~~~m~YViAf~~d~~~kDVT~RY~~~~~~k~rr~Ri~~~~~~~~W~~~~L~~~~~~---- 313 (533)
T 2qsf_A 238 TIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRITKDDFGEKWFRKVITALHHR---- 313 (533)
T ss_dssp EEECCSSCCTTSCCSTTTTSSCCCCEEEEECTTCCEEECHHHHCTTCCCCCGGGSGGGSHHHHHHHHHHHHHHCCS----
T ss_pred cccccccccccccccccccccCceeEEEEEcCCCceEecchhhhhchhhhhheeeecCCcchHHHHHHHHHHHhcC----
Confidence 44 3577899864 24679999999999987 99999999999984 4556764 78999999999863
Q ss_pred CCCCcccccccCccccccChhHHHHHHHHhccCCCCCChhhhhcCchhHhhhhhhcccccCCCCCcceeecc-------e
Q 005629 579 TGDLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSG-------H 651 (687)
Q Consensus 579 ~~~~~i~a~~~~~~~~~rD~~Ed~eL~~~~~~epmP~ti~~fKnHP~YvLeRhL~r~E~I~P~a~~~G~~~g-------E 651 (687)
..+.+|..||.||+.+..+||||+|+++|||||+|||||||++||+|||+++++|+|+| |
T Consensus 314 -------------~~~~~d~~Ed~el~~~~~~e~~P~s~~~fK~HP~yvLer~L~k~E~i~P~a~~~g~~~~~~k~~~~E 380 (533)
T 2qsf_A 314 -------------KRTKIDDYEDQYFFQRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVL 380 (533)
T ss_dssp -------------CCCHHHHHHHHHHHHHHHHSCCCSSTGGGTTCSSEEEGGGSCTTEEECTTCCCSEEEECCSTTCCEE
T ss_pred -------------CccccchhHHHHHHHHHhcCCCCccHHHHcCCcHhhhhhhhccceeeCCCCceeeEEecCcCCCccc
Confidence 23577899999999999999999999999999999999999999999999999999987 9
Q ss_pred eeeecCCccccccHHHHHHhccccCCCCeeeccccC
Q 005629 652 AVYPRSCVQTLKTKERWLREALQVKANEVPVKVCSG 687 (687)
Q Consensus 652 ~VY~R~dV~~LkS~e~W~k~GR~VK~gE~P~K~Vkg 687 (687)
+||+|+||++|||+++|+++||+||+||+|||+||+
T Consensus 381 ~VY~R~~V~~l~S~e~W~~~gR~vk~ge~P~K~v~~ 416 (533)
T 2qsf_A 381 KVYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKR 416 (533)
T ss_dssp EEEEGGGEEECBCHHHHHTTTEEECSSCCCSEEECC
T ss_pred ceeehhhhheeecHHHHHHcCCccCCCCeeeeEEec
Confidence 999999999999999999999999999999999975
No 2
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=99.94 E-value=5.9e-27 Score=247.09 Aligned_cols=109 Identities=19% Similarity=0.305 Sum_probs=89.0
Q ss_pred ceEEEEEeCcCCCCCceEEEecccCccccchhhHHhHhhcCCCeeEEEEEcCCCcccchhhhhhhhhhhccccCCHHHHH
Q 005629 486 LYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWD 565 (687)
Q Consensus 486 ~fW~EV~~~~~~~~~kWI~VDpv~~~V~~~~~~Ep~~~~~~~~m~YVVAfd~dGakDVT~RY~~~~~~~~r~Rv~~~Ww~ 565 (687)
++|+|||++.. ++||+|||+++++++|..||+ .|.++|+|||||+.|||+|||+||+.+ ..++|.|+++.||.
T Consensus 211 H~W~EV~~~~~---~rWv~vDp~~~~id~P~~ye~---gw~k~msYVIAFs~dgv~DVT~RY~~~-~~lrR~rv~e~wl~ 283 (335)
T 1x3z_A 211 HVWCEYFSNFL---NRWVHVDSCEQSFDQPYIYSI---NWNKKMSYCIAFGKDGVVDVSKRYILQ-NELPRDQIKEEDLK 283 (335)
T ss_dssp EEEEEEEETTT---TEEEEEETTTTEESCTHHHHT---TSCCCBCCEEEEETTEEEECHHHHCSS-SBCCCCSSCHHHHH
T ss_pred cEEEEEEECCC---CCEEEECCCCCccCCCceeec---CCCCceEEEEEEcCCCCEECHHHhCcC-CccccccCCHHHHH
Confidence 49999999863 799999999999999998875 578999999999999999999999999 66667899999999
Q ss_pred HHHHHhhccccCCCCCCcccccccCccccccChhHHHHHHHH
Q 005629 566 AVLAPLRELESGATGDLNVESSAKDSFVADRNSLEDMELETR 607 (687)
Q Consensus 566 ~~L~~~~~~~~~~~~~~~i~a~~~~~~~~~rD~~Ed~eL~~~ 607 (687)
.+|..|++...... +.+.+..+..||..|+.||...
T Consensus 284 ~~L~~l~~~~r~~~------s~~e~~~L~~Rd~~E~~EL~~~ 319 (335)
T 1x3z_A 284 FLCQFITKRLRYSL------NDDEIYQLACRDEQEQIELIRG 319 (335)
T ss_dssp HHHHHHHHHHHTTS------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC------CHHHHHHHHHhHHHHHHHhhcc
Confidence 99999986432110 1112344678899999998743
No 3
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=99.87 E-value=1.2e-21 Score=204.75 Aligned_cols=108 Identities=25% Similarity=0.394 Sum_probs=84.5
Q ss_pred ceEEEEEeCcCCCCCceEEEecccCccccchhhHHhHhhcCCCeeEEEEEcCCCcccchhhhhhhhhhh--ccccCCHHH
Q 005629 486 LYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKWYRI--ASKRVNSAW 563 (687)
Q Consensus 486 ~fW~EV~~~~~~~~~kWI~VDpv~~~V~~~~~~Ep~~~~~~~~m~YVVAfd~dGakDVT~RY~~~~~~~--~r~Rv~~~W 563 (687)
+.|+|||+++. +.||+|||..++++.+..+++ .+.+.|+|||||+.|||+|||.||+.+|..+ +|.|+++.|
T Consensus 170 HaW~Evy~~g~---~gWv~~Dpt~~~~~~p~~~e~---gwgr~lsYViAf~~D~a~DVT~RY~~~~~~~~~rR~~v~e~w 243 (295)
T 2f4m_A 170 HVWTEVYSPSQ---QRWLHCDACEDVCDKPLLYEI---GWGKKLSYIIAFSKDEVVDVTWRYSCKHDEVMSRRTKVKEEL 243 (295)
T ss_dssp EEEEEEEETTT---TEEEEEETTTTEESCGGGTTT---TSCCCCCCEEEECSSCEEECGGGGCSCHHHHHHHCCSSCHHH
T ss_pred EEEEEEEECCC---CeEEEEeCCcCccCCCceEee---ccCCCceEEEEECCccCccchhhcccchHHHHhhccCCCHHH
Confidence 49999999863 699999999999988888765 4678999999999999999999999999875 456889999
Q ss_pred HHHHHHHhhccccCCCCCCcccccccCccccccChhHHHHHH
Q 005629 564 WDAVLAPLRELESGATGDLNVESSAKDSFVADRNSLEDMELE 605 (687)
Q Consensus 564 w~~~L~~~~~~~~~~~~~~~i~a~~~~~~~~~rD~~Ed~eL~ 605 (687)
|..+|..|+...... + +.+.+..+..||..|..||.
T Consensus 244 l~~~l~~l~~~~r~~-----~-s~~e~~~l~~Rd~~E~~el~ 279 (295)
T 2f4m_A 244 LRETINGLNKQRQLS-----L-SESRRKELLQRIIVELVEFI 279 (295)
T ss_dssp HHHHHHHHHHHHHTT-----S-CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcc-----C-CHHHHHHHHHhHHHHHHHhc
Confidence 999999998643211 0 11122334566666776665
No 4
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=95.58 E-value=0.012 Score=61.59 Aligned_cols=82 Identities=20% Similarity=0.348 Sum_probs=56.6
Q ss_pred hcCcHHHHHHHhhcCchhhhcccCcchhhHhhhhHHHHHhhhceeeccCCCcccchHHHHHHHHHHhcCCHHHHHHHHHH
Q 005629 199 VCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSDLAHALESREGTPEEIAALSVA 278 (687)
Q Consensus 199 wcnd~~lqa~llSlLP~~~~~~~~~~~~~~~~L~~L~~Wf~~~F~vt~~~~~~~~~~~~l~~~l~~~~GSrD~gAqLF~A 278 (687)
.|..+.|++...++.... .-....+..|..|++++|+-........ ..-..+++.+.|.=...|+||++
T Consensus 122 ~~~~d~i~~~A~~~~~~~--------~~~~~~~~ai~~~v~~~~~Y~~~~~~~~---~~a~~~l~~~~G~C~d~A~l~va 190 (293)
T 3isr_A 122 YCQSDKLQKLAYKEFGKI--------ENVYSKVLAITDWIYNNVEYISGSTNSQ---TSAFDTITERAGVCRDFAHLGIA 190 (293)
T ss_dssp TBCGGGSHHHHHHHHTTC--------CSHHHHHHHHHHHHHHHSEECTTSCCTT---CCHHHHHHHCEECHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhccC--------CCHHHHHHHHHHHHHhhcEEeccCCCCC---CCHHHhhcCCcEehHHHHHHHHH
Confidence 455555666665543211 1123567789999999998765322111 11235778899999999999999
Q ss_pred HHHhcCCceeEEE
Q 005629 279 LFRALKLTTRFVS 291 (687)
Q Consensus 279 LLRALgL~aRLV~ 291 (687)
|||++||.||+|.
T Consensus 191 l~Ra~GIPAR~Vs 203 (293)
T 3isr_A 191 LCRALSIPARYFT 203 (293)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCCEEEEE
Confidence 9999999999995
No 5
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=93.00 E-value=0.083 Score=59.04 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=59.3
Q ss_pred cCcHHHHHHHhhcCchhhhcccCcchhhHhhhhHHHHHhhhceeeccCCCcccch-HHHHHHHHHHhcCCHHHHHHHHHH
Q 005629 200 CDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSF-HSDLAHALESREGTPEEIAALSVA 278 (687)
Q Consensus 200 cnd~~lqa~llSlLP~~~~~~~~~~~~~~~~L~~L~~Wf~~~F~vt~~~~~~~~~-~~~l~~~l~~~~GSrD~gAqLF~A 278 (687)
..++.|++.+..+.-. .. -....++.+..|.+.+++-..-.....++ ......+++.+.|+=-..|+||+|
T Consensus 225 ~~~~~i~~~a~~l~~~-----~~---~~~ek~~~iy~~V~~~i~y~~~~~~~~g~~~~~a~~vl~~~~G~C~d~a~Ll~A 296 (506)
T 3kd4_A 225 SQGYESKTFAQFLTDK-----SG---NEQEKVNIIRDHILNNLSTCPIPMAMTGYTVRDIDTVLRSAYGTPLEIAQLLNV 296 (506)
T ss_dssp SCCHHHHHHHHHHHSS-----CS---SHHHHHHHHHHHHHHHCEECCCCGGGGTTCCCCHHHHHHHTEECHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHhccEecceecccCCCCCCCHHHHHHhCCcchHHHHHHHHH
Confidence 6688898888776521 11 12244567889999988865321111111 113457889999999999999999
Q ss_pred HHHhcCCceeEEE
Q 005629 279 LFRALKLTTRFVS 291 (687)
Q Consensus 279 LLRALgL~aRLV~ 291 (687)
||||+|++||+|+
T Consensus 297 llRa~GIpA~~v~ 309 (506)
T 3kd4_A 297 MLNAAGIPSEVLA 309 (506)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCCcEEEE
Confidence 9999999999996
No 6
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=85.72 E-value=1.1 Score=52.32 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=29.4
Q ss_pred HHHHHHHhc----CCHHHHHHHHHHHHHhcCCceeEEEeec
Q 005629 258 LAHALESRE----GTPEEIAALSVALFRALKLTTRFVSILD 294 (687)
Q Consensus 258 l~~~l~~~~----GSrD~gAqLF~ALLRALgL~aRLV~SLq 294 (687)
|++-++..+ |-=.+.|++||.|||+||++||+|...+
T Consensus 299 l~~~~~~~~PV~~G~C~~fA~v~~~~lR~lGIPaRvVtgy~ 339 (731)
T 1ex0_A 299 LLEYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYF 339 (731)
T ss_dssp HHHHHHHTSCEEEECHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHhcCCccceeeehhHHHHHHHHHHhCCCCeeEEcccc
Confidence 344444445 8889999999999999999999997443
No 7
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=84.96 E-value=1 Score=52.23 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHHHHhcCCceeEEEeec
Q 005629 267 GTPEEIAALSVALFRALKLTTRFVSILD 294 (687)
Q Consensus 267 GSrD~gAqLF~ALLRALgL~aRLV~SLq 294 (687)
|-=.+.|++||+|||+||++||+|...+
T Consensus 270 G~C~~fA~~~~~~lR~lGIPaR~Vtgy~ 297 (692)
T 1vjj_A 270 GQCWVFAGTLNTALRSLGIPSRVITNFN 297 (692)
T ss_dssp ECHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred eeeHHHHHHHHHHHHhCCCCeeEEcccc
Confidence 7788999999999999999999998664
No 8
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=84.08 E-value=0.71 Score=53.43 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHHHHHhcCCceeEEEeec
Q 005629 267 GTPEEIAALSVALFRALKLTTRFVSILD 294 (687)
Q Consensus 267 GSrD~gAqLF~ALLRALgL~aRLV~SLq 294 (687)
|-=.+.|++||+|||+||++||+|...+
T Consensus 270 G~C~~fA~v~~t~lR~lGIPaR~Vtgy~ 297 (695)
T 1g0d_A 270 GQCWVFAAVACTVLRCLGIPTRPITNFA 297 (695)
T ss_dssp ECHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred eeeHHHHHHHHHHHHhCCCCeeEEcccc
Confidence 8889999999999999999999998664
No 9
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=82.16 E-value=0.71 Score=53.49 Aligned_cols=28 Identities=29% Similarity=0.336 Sum_probs=25.5
Q ss_pred cCCHHHHHHHHHHHHHhcCCceeEEEee
Q 005629 266 EGTPEEIAALSVALFRALKLTTRFVSIL 293 (687)
Q Consensus 266 ~GSrD~gAqLF~ALLRALgL~aRLV~SL 293 (687)
.|.=...|++|++|||+||++||+|...
T Consensus 274 ~G~C~dfA~~~~~llRalGIPAR~VsGy 301 (687)
T 2q3z_A 274 YGQCWVFAAVACTVLRCLGIPTRVVTNY 301 (687)
T ss_dssp EECHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred eeehHHHHHHHHHHHHhCCCCcEEEeec
Confidence 5888899999999999999999999744
No 10
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=49.52 E-value=8.6 Score=39.94 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=19.0
Q ss_pred CCceEEEEEeCcCCCCCceEEEecccC
Q 005629 484 APLYWAEVYCSGENLTGKWVHVDAANA 510 (687)
Q Consensus 484 ~P~fW~EV~~~~~~~~~kWI~VDpv~~ 510 (687)
..+-|+|||.+ +.||.+||..+
T Consensus 213 ~~HAW~Evyl~-----ggWv~~DpT~~ 234 (293)
T 3isr_A 213 DFHACFEAYIG-----GNWIIFDATRL 234 (293)
T ss_dssp CEEEEEEEEET-----TEEEEECTTCC
T ss_pred CeEEEEEEEEC-----CcEEEEECCCC
Confidence 46899999996 48999999975
No 11
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=24.31 E-value=46 Score=34.36 Aligned_cols=24 Identities=21% Similarity=-0.022 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 268 TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 268 SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
===|...||.++||+||+.++++.
T Consensus 81 yC~ElN~Lf~~~L~~LGF~V~~~~ 104 (293)
T 3d9w_A 81 YCYENAGLFAAALERLGFGVTGHT 104 (293)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCeEEEEE
Confidence 335788999999999999999985
No 12
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=22.76 E-value=52 Score=34.46 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=25.1
Q ss_pred HHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 259 AHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 259 ~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
.+.+.+..| ==-|...||.++||+||+.++++.
T Consensus 88 ~KiV~~~RGGyC~ElN~lf~~~L~~lGf~v~~~~ 121 (309)
T 3lnb_A 88 EKLLIQKRGGLCYELNSLLYYFLMDCGFQVYKVA 121 (309)
T ss_dssp HHHTTTCCCBCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCcchHHHHHHHHHHHHHcCCeEEEEe
Confidence 444433333 446789999999999999999995
No 13
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=21.63 E-value=53 Score=33.81 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=25.6
Q ss_pred HHHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 258 LAHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 258 l~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
+.+.+.+..| ===|...||.++||+||++++++.
T Consensus 61 ~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~ 95 (295)
T 2ija_A 61 FDQVVRRNRGGWCLQVNHLLYWALTTIGFETTMLG 95 (295)
T ss_dssp HHHHHTTCCCBCHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHhcCCCcEEhHHHHHHHHHHHHHcCCcEEEEE
Confidence 3444444444 446789999999999999999985
No 14
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=21.53 E-value=54 Score=33.57 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 268 TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 268 SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
===|...||.++||+||+.++++.
T Consensus 72 yC~ElN~Lf~~~L~~LGF~V~~~~ 95 (278)
T 2bsz_A 72 YCFEHNLLFMHALKALGFEVGGLA 95 (278)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ehHHHHHHHHHHHHHCCCeEEEEE
Confidence 445789999999999999999985
No 15
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=21.18 E-value=60 Score=33.28 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=25.3
Q ss_pred HHHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 258 LAHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 258 l~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
+.+.+.+..| ===|...||.++||+||++++++.
T Consensus 60 ~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~ 94 (284)
T 1e2t_A 60 EEKLLYARRGGYCFELNGLFERALRDIGFNVRSLL 94 (284)
T ss_dssp HHHHTTTCCCBCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhcCCCcEEhHHHHHHHHHHHHHCCCeEEEEE
Confidence 3344433333 445789999999999999999985
No 16
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=20.92 E-value=57 Score=33.38 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=24.7
Q ss_pred HHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 259 AHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 259 ~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
.+.+.+..| ===|...||.++||+||++++++.
T Consensus 62 ~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~ 95 (278)
T 1w5r_A 62 AKLVDRRRGGYQYEHNGLLGYVLEELGFEVERLS 95 (278)
T ss_dssp HHHTTTCCCBCHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhcCCCceehHHHHHHHHHHHHHcCCeEEEEE
Confidence 344433333 445789999999999999999985
No 17
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=20.70 E-value=60 Score=33.62 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=25.5
Q ss_pred HHHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 258 LAHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 258 l~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
+.+.+.+..| ==-|...||.++||+||++++++.
T Consensus 81 ~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~l~ 115 (299)
T 1w4t_A 81 FAKVVEGSRGGYCFELNSLFARLLLALGYELELLV 115 (299)
T ss_dssp HHHHTTTTCCBCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHhcCCCcchHhHHHHHHHHHHHcCCeEEEEE
Confidence 3444433334 446789999999999999999985
No 18
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=20.61 E-value=58 Score=33.34 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=24.7
Q ss_pred HHHHHHhcC-CHHHHHHHHHHHHHhcCCceeEEE
Q 005629 259 AHALESREG-TPEEIAALSVALFRALKLTTRFVS 291 (687)
Q Consensus 259 ~~~l~~~~G-SrD~gAqLF~ALLRALgL~aRLV~ 291 (687)
.+.+.+..| ===|...||.++||+||++++++.
T Consensus 59 ~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~ 92 (280)
T 2vfb_A 59 DKLVDRRRGGYCYEHNGLIGYVLAELGYRVRRLA 92 (280)
T ss_dssp HHHTTTCCCBCHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhcCCCceEhHHHHHHHHHHHHHCCCeEEEEE
Confidence 344433333 445789999999999999999985
Done!