BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005631
(687 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HZH|A Chain A, Crystal Structure Of The Chex-Chey-Bef3-Mg+2 Complex From
Borrelia Burgdorferi
Length = 157
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 20 VITEATNGLQAWKILEDLTNHIDLV-LTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSL 78
+I A +G +A ++ +ID+V L MP + G+ LS IM KN VIM+S+L
Sbjct: 63 IIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFD--KNARVIMISAL 120
Query: 79 DSMGLVFKCLSKGAVDFLVKPIRKNEL 105
LV CL KGA F+VKP+ + ++
Sbjct: 121 GKEQLVKDCLIKGAKTFIVKPLDRAKV 147
>pdb|2WB4|A Chain A, Activated Diguanylate Cyclase Pled In Complex With
C-Di-Gmp
pdb|2WB4|B Chain B, Activated Diguanylate Cyclase Pled In Complex With
C-Di-Gmp
Length = 459
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 42 DLVLTEVM-PCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L +VM P + G + K+ T +++PV+++++LD G + L GA DFL KPI
Sbjct: 48 DIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 41 IDLVLTEVMPC-LSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKP 99
+DLV+ G+ + + S + + LPV+ M D G + K L G D L +P
Sbjct: 196 VDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRP 255
Query: 100 IRKNEL 105
I EL
Sbjct: 256 IDPQEL 261
>pdb|1W25|A Chain A, Response Regulator Pled In Complex With C-digmp
pdb|1W25|B Chain B, Response Regulator Pled In Complex With C-digmp
pdb|2V0N|A Chain A, Activated Response Regulator Pled In Complex With C-Digmp
And Gtp-Alpha-S
pdb|2V0N|B Chain B, Activated Response Regulator Pled In Complex With C-Digmp
And Gtp-Alpha-S
Length = 459
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 42 DLVLTEVM-PCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L +VM P + G + K+ T +++PV+++++LD G + L GA DFL KPI
Sbjct: 47 DIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 106
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 41 IDLVLTEVMPC-LSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKP 99
+DLV+ G+ + + S + + LPV+ M D G + K L G D L +P
Sbjct: 195 VDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRP 254
Query: 100 IRKNEL 105
I EL
Sbjct: 255 IDPQEL 260
>pdb|3H1F|A Chain A, Crystal Structure Of Chey Mutant D53a Of Helicobacter
Pylori
Length = 129
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
+ EA +G++AW+ L+ + L+ MP ++G+ L+ K+ S K +P+IM+++
Sbjct: 33 VLEAEHGVEAWEKLDANADTKVLITAWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGG 92
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELK 106
V L G +++VKP LK
Sbjct: 93 KAEVITALKAGVNNYIVKPFTPQVLK 118
>pdb|3GWG|A Chain A, Crystal Structure Of Chey Of Helicobacter Pylori
pdb|3H1E|A Chain A, Crystal Structure Of Mg(2+) And Beh(3)(-)-Bound Chey Of
Heli Pylori
Length = 129
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
+ EA +G++AW+ L+ + L+ MP ++G+ L+ K+ S K +P+IM+++
Sbjct: 33 VLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGG 92
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELK 106
V L G +++VKP LK
Sbjct: 93 KAEVITALKAGVNNYIVKPFTPQVLK 118
>pdb|3H1G|A Chain A, Crystal Structure Of Chey Mutant T84a Of Helicobacter
Pylori
Length = 129
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
+ EA +G++AW+ L+ + L+ MP ++G+ L+ K+ S K +P+IM+++
Sbjct: 33 VLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGG 92
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELK 106
V L G +++VKP LK
Sbjct: 93 KAEVITALKAGVNNYIVKPFTPQVLK 118
>pdb|3F7A|A Chain A, Structure Of Orthorhombic Crystal Form Of Pseudomonas
Aeruginosa Rssb
pdb|3F7A|B Chain B, Structure Of Orthorhombic Crystal Form Of Pseudomonas
Aeruginosa Rssb
Length = 394
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ +A NGLQ +I E + DLV+ ++ P + G+ L+ +I +T P+I++S
Sbjct: 32 VLQALNGLQGLQIFE--SEQPDLVICDLRXPQIDGLELIRRI--RQTASETPIIVLSGAG 87
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRC 116
M + L GA D+L+KP+ E + +H RR
Sbjct: 88 VMSDAVEALRLGAADYLIKPL---EDLAVLEHSVRRA 121
>pdb|1U0S|Y Chain Y, Chemotaxis Kinase Chea P2 Domain In Complex With Response
Regulator Chey From The Thermophile Thermotoga Maritima
Length = 118
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 19 KVITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSL 78
+V EATNG +A + ++L I + + MP ++G+ + +IM K N +I+ S++
Sbjct: 27 EVAGEATNGREAVEKYKELKPDI-VTMDITMPEMNGIDAIKEIM--KIDPNAKIIVCSAM 83
Query: 79 DSMGLVFKCLSKGAVDFLVKPIRKNEL 105
+V + + GA DF+VKP + + +
Sbjct: 84 GQQAMVIEAIKAGAKDFIVKPFQPSRV 110
>pdb|3TMY|A Chain A, Chey From Thermotoga Maritima (Mn-Iii)
pdb|3TMY|B Chain B, Chey From Thermotoga Maritima (Mn-Iii)
pdb|4TMY|A Chain A, Chey From Thermotoga Maritima (mg-iv)
pdb|4TMY|B Chain B, Chey From Thermotoga Maritima (mg-iv)
pdb|1TMY|A Chain A, Chey From Thermotoga Maritima (Apo-I)
pdb|2TMY|A Chain A, Chey From Thermotoga Maritima (Apo-Ii)
Length = 120
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 19 KVITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSL 78
+V EATNG +A + ++L I + + MP ++G+ + +IM K N +I+ S++
Sbjct: 28 EVAGEATNGREAVEKYKELKPDI-VTMDITMPEMNGIDAIKEIM--KIDPNAKIIVCSAM 84
Query: 79 DSMGLVFKCLSKGAVDFLVKPIRKNEL 105
+V + + GA DF+VKP + + +
Sbjct: 85 GQQAMVIEAIKAGAKDFIVKPFQPSRV 111
>pdb|1QMP|A Chain A, Phosphorylated Aspartate In The Crystal Structure Of The
Sporulation Response Regulator, Spo0a
pdb|1QMP|B Chain B, Phosphorylated Aspartate In The Crystal Structure Of The
Sporulation Response Regulator, Spo0a
pdb|1QMP|C Chain C, Phosphorylated Aspartate In The Crystal Structure Of The
Sporulation Response Regulator, Spo0a
pdb|1QMP|D Chain D, Phosphorylated Aspartate In The Crystal Structure Of The
Sporulation Response Regulator, Spo0a
Length = 130
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 18 MKVITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKI---MSHKTRKNLPVIM 74
M+VI A NG ++LE+ I L+L +MP L G+A+L +I H+ VIM
Sbjct: 28 MEVIGTAYNGQDCLQMLEEKRPDI-LLLXIIMPHLDGLAVLERIRAGFEHQPN----VIM 82
Query: 75 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 112
+++ + K + GA F++KP +++NL H+
Sbjct: 83 LTAFGQEDVTKKAVELGASYFILKPF---DMENLAHHI 117
>pdb|3EQ2|A Chain A, Structure Of Hexagonal Crystal Form Of Pseudomonas
Aeruginosa Rssb
pdb|3EQ2|B Chain B, Structure Of Hexagonal Crystal Form Of Pseudomonas
Aeruginosa Rssb
Length = 394
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ +A NGLQ +I E + DLV+ ++ P + G+ L+ +I +T P+I++S
Sbjct: 32 VLQALNGLQGLQIFE--SEQPDLVICDLRXPQIDGLELIRRI--RQTASETPIIVLSGAG 87
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRC 116
+ L GA D+L+KP+ E + +H RR
Sbjct: 88 VXSDAVEALRLGAADYLIKPL---EDLAVLEHSVRRA 121
>pdb|1DZ3|A Chain A, Domain-Swapping In The Sporulation Response Regulator
Spo0a
Length = 130
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 18 MKVITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKI---MSHKTRKNLPVIM 74
M+VI A NG ++LE+ I L+L +MP L G+A+L +I H+ VIM
Sbjct: 28 MEVIGTAYNGQDCLQMLEEKRPDI-LLLDIIMPHLDGLAVLERIRAGFEHQPN----VIM 82
Query: 75 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 112
+++ + K + GA F++KP +++NL H+
Sbjct: 83 LTAFGQEDVTKKAVELGASYFILKPF---DMENLAHHI 117
>pdb|3TO5|A Chain A, High Resolution Structure Of Chey3 From Vibrio Cholerae
Length = 134
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
EA +GL A +L+ D V+T+ MP + G+ LL I + + K+LPV+M+++
Sbjct: 42 EADDGLTALPMLK--KGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 115
+ + G ++VKP LK ++ R
Sbjct: 100 EQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFER 133
>pdb|3T8Y|A Chain A, Crystal Structure Of The Response Regulator Domain Of
Thermotoga Maritima Cheb
pdb|3T8Y|B Chain B, Crystal Structure Of The Response Regulator Domain Of
Thermotoga Maritima Cheb
Length = 164
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 18 MKVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMS 76
MKV+ A +GL+A + +L D++ ++ MP L+G+ L IM + VIM+S
Sbjct: 51 MKVVGFAKDGLEAVEKAIELKP--DVITMDIEMPNLNGIEALKLIMKKAPTR---VIMVS 105
Query: 77 SLDSMG--LVFKCLSKGAVDFLVKP 99
SL G + + L GAVDF+ KP
Sbjct: 106 SLTEEGAAITIEALRNGAVDFITKP 130
>pdb|1A2O|A Chain A, Structural Basis For Methylesterase Cheb Regulation By A
Phosphorylation-Activated Domain
pdb|1A2O|B Chain B, Structural Basis For Methylesterase Cheb Regulation By A
Phosphorylation-Activated Domain
Length = 349
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 18 MKVITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSS 77
M+++ A + L A +++ + L L MP + G+ L K+M + +PV+M+SS
Sbjct: 29 MEMVATAPDPLVARDLIKKFNPDV-LTLDVEMPRMDGLDFLEKLMR---LRPMPVVMVSS 84
Query: 78 LDSMG--LVFKCLSKGAVDFLVKP---IRKNEL 105
L G + + L GA+DF+ KP IR+ L
Sbjct: 85 LTGKGSEVTLRALELGAIDFVTKPQLGIREGML 117
>pdb|3LUF|A Chain A, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3LUF|B Chain B, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|A Chain A, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|B Chain B, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
Length = 259
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVM-PCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ EA++ +A LE I LVL + P + G++L+ + +++ L +I +S D
Sbjct: 151 VHEASHAREALATLEQ-HPAIRLVLVDYYXPEIDGISLVRXLRERYSKQQLAIIGISVSD 209
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELK 106
GL + L +GA DFL +P EL+
Sbjct: 210 KRGLSARYLKQGANDFLNQPFEPEELQ 236
>pdb|1QKK|A Chain A, Crystal Structure Of The Receiver Domain And Linker Region
Of Dctd From Sinorhizobium Meliloti
Length = 155
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 13 FEIAVMKVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLP 71
F ++ TEA GL A + +V++++ MP + G+AL KI++ +LP
Sbjct: 28 FTVSSFASATEALAGLSA--------DFAGIVISDIRMPGMDGLALFRKILA--LDPDLP 77
Query: 72 VIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
+I+++ + + + + GA DF+ KP + L
Sbjct: 78 MILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 111
>pdb|1L5Y|A Chain A, Crystal Structure Of Mg2+ / Bef3-bound Receiver Domain Of
Sinorhizobium Meliloti Dctd
pdb|1L5Y|B Chain B, Crystal Structure Of Mg2+ / Bef3-bound Receiver Domain Of
Sinorhizobium Meliloti Dctd
pdb|1L5Z|A Chain A, Crystal Structure Of The E121k Substitution Of The
Receiver Domain Of Sinorhizobium Meliloti Dctd
Length = 155
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 13 FEIAVMKVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLP 71
F ++ TEA GL A + +V++++ MP + G+AL KI++ +LP
Sbjct: 28 FTVSSFASATEALAGLSA--------DFAGIVISDIRMPGMDGLALFRKILA--LDPDLP 77
Query: 72 VIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
+I+++ + + + + GA DF+ KP + L
Sbjct: 78 MILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 111
>pdb|3Q9S|A Chain A, Crystal Structure Of Rra(1-215) From Deinococcus
Radiodurans
Length = 249
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 24 ATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKN--LPVIMMSSLDS 80
A NGL K ED H DL+L ++ +P G ++ ++ RKN LP+I++++ D+
Sbjct: 70 AXNGL--IKARED---HPDLILLDLGLPDFDGGDVVQRL-----RKNSALPIIVLTARDT 119
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNEL 105
+ + L GA D+L+KP +EL
Sbjct: 120 VEEKVRLLGLGADDYLIKPFHPDEL 144
>pdb|3EOD|A Chain A, Crystal Structure Of N-Terminal Domain Of E. Coli Rssb
Length = 130
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 24 ATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMG 82
A +G+ A ++L T DL++ ++ MP ++G+ LL I + + PV+++S+ ++M
Sbjct: 37 AADGVDALELLGGFTP--DLMICDIAMPRMNGLKLLEHIRNRGDQT--PVLVISATENMA 92
Query: 83 LVFKCLSKGAVDFLVKPIRK-NELKNL 108
+ K L G D L+KP++ N L+ +
Sbjct: 93 DIAKALRLGVEDVLLKPVKDLNRLREM 119
>pdb|1DC7|A Chain A, Structure Of A Transiently Phosphorylated "switch" In
Bacterial Signal Transduction
Length = 124
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 42 DLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L+++ MP + G+ALL +I + LPVI+M++ + +GA D+L KP
Sbjct: 49 DVLLSDIRMPGMDGLALLKQI--KQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPF 106
Query: 101 RKNE 104
+E
Sbjct: 107 DIDE 110
>pdb|1J56|A Chain A, Minimized Average Structure Of Beryllofluoride-Activated
Ntrc Receiver Domain: Model Structure Incorporating
Active Site Contacts
pdb|1KRX|A Chain A, Solution Structure Of Beryllofluoride-Activated Ntrc
Receiver Domain: Model Structures Incorporating Active
Site Contacts
pdb|1NTR|A Chain A, Solution Structure Of The N-Terminal Receiver Domain Of
Ntrc
Length = 124
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 42 DLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L+++ MP + G+ALL +I + LPVI+M++ + +GA D+L KP
Sbjct: 49 DVLLSDIRMPGMDGLALLKQI--KQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPF 106
Query: 101 RKNE 104
+E
Sbjct: 107 DIDE 110
>pdb|1KRW|A Chain A, Solution Structure And Backbone Dynamics Of
Beryllofluoride- Activated Ntrc Receiver Domain
Length = 124
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 42 DLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L+++ MP + G+ALL +I + LPVI+M++ + +GA D+L KP
Sbjct: 49 DVLLSDIRMPGMDGLALLKQI--KQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPF 106
Query: 101 RKNE 104
+E
Sbjct: 107 DIDE 110
>pdb|3JTE|A Chain A, Crystal Structure Of Response Regulator Receiver Domain
Protein From Clostridium Thermocellum
Length = 143
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 13 FEIAVMKVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLP 71
EI +V+T A++ + +I + N ID+V+T++ MP LSG+ +L +I K ++
Sbjct: 23 LEIDGNEVLT-ASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREI--KKITPHMA 79
Query: 72 VIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
VI+++ + + +GA ++L KP+ +L
Sbjct: 80 VIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDL 113
>pdb|2JB9|A Chain A, Phob Response Regulator Receiver Domain Constitutively-
Active Double Mutant D10a And D53e.
pdb|2JB9|B Chain B, Phob Response Regulator Receiver Domain Constitutively-
Active Double Mutant D10a And D53e
Length = 127
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 42 DLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
DL+L E ++P SG+ + + +++PV+M+++ + L GA D++ KP
Sbjct: 48 DLILLEWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPF 107
Query: 101 RKNELKNLWQHVWRR 115
EL + V RR
Sbjct: 108 SPKELVARIKAVMRR 122
>pdb|1DC8|A Chain A, Structure Of A Transiently Phosphorylated "switch" In
Bacterial Signal Transduction
Length = 124
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 42 DLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
D++L+ + MP + G+ALL +I + LPVI+M++ + +GA D+L KP
Sbjct: 49 DVLLSXIRMPGMDGLALLKQI--KQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPF 106
Query: 101 RKNE 104
+E
Sbjct: 107 DIDE 110
>pdb|2ZAY|A Chain A, Crystal Structure Of Response Regulator From
Desulfuromonas Acetoxidans
pdb|2ZAY|B Chain B, Crystal Structure Of Response Regulator From
Desulfuromonas Acetoxidans
Length = 147
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
I + N ++A + + H L++TE MP +SG+ L + + + ++PVI +S
Sbjct: 35 IIQCGNAIEAVPVA--VKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA 92
Query: 80 SMGLVFKCLSKGAVDFLVKPI 100
+ + L G +DF+ KP+
Sbjct: 93 TAKEEAQLLDMGFIDFIAKPV 113
>pdb|3GT7|A Chain A, Crystal Structure Of Signal Receiver Domain Of Signal
Transduction Histidine Kinase From Syntrophus
Aciditrophicus
Length = 154
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 26 NGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLV 84
NG +A + L DL++++V MP + G AL + + +PVI+++ L V
Sbjct: 39 NGREAVRFLS--LTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDV 96
Query: 85 FKCLSKGAVDFLVKPIR 101
+ L GA DF+ KP +
Sbjct: 97 VRSLECGADDFITKPCK 113
>pdb|3T6K|A Chain A, Crystal Structure Of A Hypothetical Response Regulator
(Caur_3799) From Chloroflexus Aurantiacus J-10-Fl At
1.86 A Resolution
pdb|3T6K|B Chain B, Crystal Structure Of A Hypothetical Response Regulator
(Caur_3799) From Chloroflexus Aurantiacus J-10-Fl At
1.86 A Resolution
Length = 136
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 43 LVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRK 102
L+ ++P + G L ++ H K LP++ +++ + GA D+L KP
Sbjct: 52 LICDVLLPGIDGYTLCKRVRQHPLTKTLPILXLTAQGDISAKIAGFEAGANDYLAKPFEP 111
Query: 103 NEL 105
EL
Sbjct: 112 QEL 114
>pdb|1S8N|A Chain A, Crystal Structure Of Rv1626 From Mycobacterium
Tuberculosis
pdb|1SD5|A Chain A, Crystal Structure Of Rv1626
Length = 205
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 19 KVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSS 77
+++ EA +G +A ++ E + DLV+ +V MP G+ S+I S ++ P++++++
Sbjct: 39 EIVGEAGDGQEAVELAE--LHKPDLVIMDVKMPRRDGIDAASEIAS---KRIAPIVVLTA 93
Query: 78 LDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
LV + GA+ +LVKP ++L
Sbjct: 94 FSQRDLVERARDAGAMAYLVKPFSISDL 121
>pdb|1B00|A Chain A, Phob Receiver Domain From Escherichia Coli
pdb|1B00|B Chain B, Phob Receiver Domain From Escherichia Coli
pdb|2IYN|A Chain A, The Co-Factor-Induced Pre-Active Conformation In Phob
pdb|2IYN|B Chain B, The Co-Factor-Induced Pre-Active Conformation In Phob
pdb|2IYN|C Chain C, The Co-Factor-Induced Pre-Active Conformation In Phob
Length = 127
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 42 DLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
DL+L + ++P SG+ + + +++PV+M+++ + L GA D++ KP
Sbjct: 48 DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPF 107
Query: 101 RKNELKNLWQHVWRR 115
EL + V RR
Sbjct: 108 SPKELVARIKAVMRR 122
>pdb|1ZES|A Chain A, Bef3- Activated Phob Receiver Domain
pdb|1ZES|B Chain B, Bef3- Activated Phob Receiver Domain
pdb|1ZES|C Chain C, Bef3- Activated Phob Receiver Domain
Length = 125
Score = 35.8 bits (81), Expect = 0.090, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 42 DLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
DL+L + ++P SG+ + + +++PV+M+++ + L GA D++ KP
Sbjct: 48 DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPF 107
Query: 101 RKNELKNLWQHVWRR 115
EL + V RR
Sbjct: 108 SPKELVARIKAVMRR 122
>pdb|3EUL|A Chain A, Structure Of The Signal Receiver Domain Of The Putative
Response Regulator Narl From Mycobacterium Tuberculosis
pdb|3EUL|B Chain B, Structure Of The Signal Receiver Domain Of The Putative
Response Regulator Narl From Mycobacterium Tuberculosis
pdb|3EUL|C Chain C, Structure Of The Signal Receiver Domain Of The Putative
Response Regulator Narl From Mycobacterium Tuberculosis
pdb|3EUL|D Chain D, Structure Of The Signal Receiver Domain Of The Putative
Response Regulator Narl From Mycobacterium Tuberculosis
Length = 152
Score = 35.4 bits (80), Expect = 0.098, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 18 MKVITEATNGLQAWKILEDLTNHI-DLVLTEV-MPCLSGVALLSKIMSHKTRKNLP--VI 73
+ V+ EA +G A LE + H+ D+ L + MP + G + + + S++ LP V+
Sbjct: 41 VNVVGEADDGAAA---LELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYE----LPTRVL 93
Query: 74 MMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
++S+ D +V++ L +GA FL+K + E+
Sbjct: 94 LISAHDEPAIVYQALQQGAAGFLLKDSTRTEI 125
>pdb|3GL9|A Chain A, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
pdb|3GL9|B Chain B, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
pdb|3GL9|C Chain C, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
pdb|3GL9|D Chain D, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
Length = 122
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
+ EA NG A + L + T + +VL +MP + G +L K+ + K +PVI++++
Sbjct: 29 VIEAENGQIALEKLSEFTPDL-IVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 112
LS GA + KP ++ +H+
Sbjct: 88 EEDESLALSLGARKVMRKPFSPSQFIEEVKHL 119
>pdb|3DGE|C Chain C, Structure Of A Histidine Kinase-response Regulator Complex
Reveals Insights Into Two-component Signaling And A
Novel Cis- Autophosphorylation Mechanism
pdb|3DGE|D Chain D, Structure Of A Histidine Kinase-response Regulator Complex
Reveals Insights Into Two-component Signaling And A
Novel Cis- Autophosphorylation Mechanism
pdb|3DGF|C Chain C, Structure Of A Histidine Kinase-Response Regulator Complex
Reveals Insights Into Two-Component Signaling And A
Novel Cis- Autophosphorylation Mechanism
Length = 122
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
+ EA NG A + L + T + +VL +MP + G +L K+ + K +PVI++++
Sbjct: 29 VIEAENGQIALEKLSEFTPDL-IVLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 112
LS GA + KP ++ +H+
Sbjct: 88 EEDESLALSLGARKVMRKPFSPSQFIEEVKHL 119
>pdb|1PUX|A Chain A, Nmr Solution Structure Of Bef3-Activated Spo0f, 20
Conformers
pdb|1FSP|A Chain A, Nmr Solution Structure Of Bacillus Subtilis Spo0f Protein,
20 Structures
pdb|1NAT|A Chain A, Crystal Structure Of Spoof From Bacillus Subtilis
pdb|2FSP|A Chain A, Nmr Solution Structure Of Bacillus Subtilis Spo0f Protein,
Minimized Average Structure
Length = 124
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRMKV--IDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 88 DMIQESKELGALTHFAKPFDIDEIRD 113
>pdb|1F51|E Chain E, A Transient Interaction Between Two Phosphorelay Proteins
Trapped In A Crystal Lattice Reveals The Mechanism Of
Molecular Recognition And Phosphotransfer In Singal
Transduction
pdb|1F51|F Chain F, A Transient Interaction Between Two Phosphorelay Proteins
Trapped In A Crystal Lattice Reveals The Mechanism Of
Molecular Recognition And Phosphotransfer In Singal
Transduction
pdb|1F51|G Chain G, A Transient Interaction Between Two Phosphorelay Proteins
Trapped In A Crystal Lattice Reveals The Mechanism Of
Molecular Recognition And Phosphotransfer In Singal
Transduction
pdb|1F51|H Chain H, A Transient Interaction Between Two Phosphorelay Proteins
Trapped In A Crystal Lattice Reveals The Mechanism Of
Molecular Recognition And Phosphotransfer In Singal
Transduction
Length = 119
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 30 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRMKV--IDENIRVIIMTAYGEL 85
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 86 DMIQESKELGALTHFAKPFDIDEIRD 111
>pdb|3Q15|C Chain C, Crystal Structure Of Raph Complexed With Spo0f
pdb|3Q15|D Chain D, Crystal Structure Of Raph Complexed With Spo0f
Length = 126
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 34 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRM--KVIDENIRVIIMTAYGEL 89
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 90 DMIQESKELGALTHFAKPFDIDEIRD 115
>pdb|1D5W|A Chain A, Phosphorylated Fixj Receiver Domain
pdb|1D5W|B Chain B, Phosphorylated Fixj Receiver Domain
pdb|1D5W|C Chain C, Phosphorylated Fixj Receiver Domain
Length = 126
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 36 DLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDF 95
D+ N + LV MP +SGV LL + K N+P I+++ + + + + GAVDF
Sbjct: 45 DVRNGV-LVTXLRMPDMSGVELLRNLGDLKI--NIPSIVITGHGDVPMAVEAMKAGAVDF 101
Query: 96 LVKP 99
+ KP
Sbjct: 102 IEKP 105
>pdb|1SRR|A Chain A, Crystal Structure Of A Phosphatase Resistant Mutant Of
Sporulation Response Regulator Spo0f From Bacillus
Subtilis
pdb|1SRR|B Chain B, Crystal Structure Of A Phosphatase Resistant Mutant Of
Sporulation Response Regulator Spo0f From Bacillus
Subtilis
pdb|1SRR|C Chain C, Crystal Structure Of A Phosphatase Resistant Mutant Of
Sporulation Response Regulator Spo0f From Bacillus
Subtilis
pdb|1PEY|A Chain A, Crystal Structure Of The Response Regulator Spo0f
Complexed With Mn2+
pdb|1PEY|B Chain B, Crystal Structure Of The Response Regulator Spo0f
Complexed With Mn2+
pdb|1PEY|C Chain C, Crystal Structure Of The Response Regulator Spo0f
Complexed With Mn2+
Length = 124
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRM--KVIDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 88 DMIQESKELGALTHFAKPFDIDEIRD 113
>pdb|2JVI|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response
Regulator Spo0f Mutant H101a From Bacillus Subtilis
Length = 132
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRMKV--IDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 88 DMIQESKELGALTAFAKPFDIDEIRD 113
>pdb|3BRE|A Chain A, Crystal Structure Of P.Aeruginosa Pa3702
pdb|3BRE|B Chain B, Crystal Structure Of P.Aeruginosa Pa3702
Length = 358
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 25 TNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLV 84
N ++ IL+DL VMP + G+ LL+ + +++P+I++S+ + +
Sbjct: 59 ANQIKPTVILQDL----------VMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVK 108
Query: 85 FKCLSKGAVDFLVK 98
+ GA D+LVK
Sbjct: 109 SAAFAAGANDYLVK 122
>pdb|3I5A|A Chain A, Crystal Structure Of Full-Length Wpsr From Pseudomonas
Syringae
Length = 334
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 33 ILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGA 92
IL+DL VMP L G+ L+ + S+ +++P+I++S+ + + + GA
Sbjct: 65 ILQDL----------VMPGLDGLTLVREYRSNPLTRDIPIIVLSTKEDPLIKSAAFAAGA 114
Query: 93 VDFLVK 98
D+LVK
Sbjct: 115 NDYLVK 120
>pdb|1DBW|A Chain A, Crystal Structure Of Fixj-N
pdb|1DBW|B Chain B, Crystal Structure Of Fixj-N
pdb|1DCK|A Chain A, Structure Of Unphosphorylated Fixj-N Complexed With Mn2+
pdb|1DCK|B Chain B, Structure Of Unphosphorylated Fixj-N Complexed With Mn2+
pdb|1DCM|A Chain A, Structure Of Unphosphorylated Fixj-N With An Atypical
Conformer (Monomer A)
pdb|1DCM|B Chain B, Structure Of Unphosphorylated Fixj-N With An Atypical
Conformer (Monomer A)
Length = 126
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 36 DLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDF 95
D+ N + LV MP +SGV LL + K N+P I+++ + + + + GAVDF
Sbjct: 45 DVRNGV-LVTDLRMPDMSGVELLRNLGDLKI--NIPSIVITGHGDVPMAVEAMKAGAVDF 101
Query: 96 LVKP 99
+ KP
Sbjct: 102 IEKP 105
>pdb|1YIO|A Chain A, Crystallographic Structure Of Response Regulator Styr From
Pseudomonas Fluorescens
pdb|1ZN2|A Chain A, Low Resolution Structure Of Response Regulator Styr
Length = 208
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 40 HIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKP 99
H LVL MP +SG+ L ++ + +P++ +++ + + + + GA++FL KP
Sbjct: 49 HGCLVLDMRMPGMSGIELQEQLTA--ISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKP 106
Query: 100 IRKNEL 105
+ L
Sbjct: 107 FEEQAL 112
>pdb|3LUA|A Chain A, Crystal Structure Of A Signal Receiver Domain Of Two
Component Signal Transduction (Histidine Kinase) From
Clostridium Thermocellum
Length = 140
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPC-LSGVALLSKIMSHKTRKNLPVIMMSSLDS 80
E N + + I +DL + I L++ ++ P G+ +LS I ++ N PVI+ + D+
Sbjct: 34 EVENLKKFYSIFKDL-DSITLIIXDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDN 92
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCH 117
G L D+++KP L+N + V + C
Sbjct: 93 PGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKICQ 129
>pdb|3F7N|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89l
Complexed With Bef3- And Mn2+
pdb|3F7N|B Chain B, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89l
Complexed With Bef3- And Mn2+
Length = 128
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ EA +G+ A L+ V+++ +MP + G+ LL I + LPV+M+++L
Sbjct: 32 VEEAEDGVDALNKLQ--AGGYGFVISDWMMPNMDGLELLKTIRADGAMSALPVLMVTALA 89
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 115
+ GA ++VKP L+ ++ +
Sbjct: 90 KKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>pdb|1YS6|A Chain A, Crystal Structure Of The Response Regulatory Protein Prra
From Mycobacterium Tuberculosis
pdb|1YS6|B Chain B, Crystal Structure Of The Response Regulatory Protein Prra
From Mycobacterium Tuberculosis
pdb|1YS7|A Chain A, Crystal Structure Of The Response Regulator Protein Prra
Comlexed With Mg2+
pdb|1YS7|B Chain B, Crystal Structure Of The Response Regulator Protein Prra
Comlexed With Mg2+
Length = 233
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 13 FEIAVMKVITEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLP 71
FE+A A +G +A + + N D ++ ++ MP L GV++++ + + ++P
Sbjct: 32 FEVA------TAVDGAEALRSATE--NRPDAIVLDINMPVLDGVSVVTALRAMD--NDVP 81
Query: 72 VIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 115
V ++S+ S+ L GA D+LVKP EL + + RR
Sbjct: 82 VCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>pdb|2FTK|E Chain E, Berylloflouride Spo0f Complex With Spo0b
pdb|2FTK|F Chain F, Berylloflouride Spo0f Complex With Spo0b
pdb|2FTK|G Chain G, Berylloflouride Spo0f Complex With Spo0b
pdb|2FTK|H Chain H, Berylloflouride Spo0f Complex With Spo0b
Length = 124
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL + +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLXMKIPGMDGIEILKRM--KVIDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 88 DMIQESKELGALTHFAKPFDIDEIRD 113
>pdb|2JVJ|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response
Regulator Spo0f Mutant I90a From Bacillus Subtilis
Length = 132
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ +L ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEILKRMKV--IDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
+ + GA+ KP +E+++
Sbjct: 88 DMAQESKELGALTHFAKPFDIDEIRD 113
>pdb|3NNN|A Chain A, Bef3 Activated Drrd Receiver Domain
pdb|3NNN|B Chain B, Bef3 Activated Drrd Receiver Domain
Length = 122
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 37 LTNHIDLVLTEVM-PCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDF 95
L D+V+ ++M P G +L + ++ N PV+M+++L + K L+ GA D+
Sbjct: 43 LNEPFDVVILDIMLPVHDGWEILKSM--RESGVNTPVLMLTALSDVEYRVKGLNMGADDY 100
Query: 96 LVKPIRKNEL 105
L KP EL
Sbjct: 101 LPKPFDLREL 110
>pdb|2JBA|A Chain A, Phob Response Regulator Receiver Domain Constitutively-
Active Double Mutant D53a And Y102c
Length = 127
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 43 LVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRK 102
++L ++P SG+ + + +++PV+M+++ + L GA D + KP
Sbjct: 50 ILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDCITKPFSP 109
Query: 103 NELKNLWQHVWRR 115
EL + V RR
Sbjct: 110 KELVARIKAVMRR 122
>pdb|2JVK|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response
Regulator Spo0f Mutant L66a From Bacillus Subtilis
Length = 132
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 23 EATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSM 81
+A NGLQA I+ DLVL ++ +P + G+ + ++ +N+ VI+M++ +
Sbjct: 32 QAANGLQALDIVT--KERPDLVLLDMKIPGMDGIEIAKRMKV--IDENIRVIIMTAYGEL 87
Query: 82 GLVFKCLSKGAVDFLVKPIRKNELKN 107
++ + GA+ KP +E+++
Sbjct: 88 DMIQESKELGALTHFAKPFDIDEIRD 113
>pdb|2JBA|B Chain B, Phob Response Regulator Receiver Domain Constitutively-
Active Double Mutant D53a And Y102c
Length = 127
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 43 LVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRK 102
++L ++P SG+ + + +++PV+M+++ + L GA D + KP
Sbjct: 50 ILLAWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDCITKPFSP 109
Query: 103 NELKNLWQHVWRR 115
EL + V RR
Sbjct: 110 KELVARIKAVMRR 122
>pdb|1OXB|B Chain B, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P2(1)2(1)2(1)
pdb|1OXK|B Chain B, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
pdb|1OXK|D Chain D, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
pdb|1OXK|F Chain F, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
pdb|1OXK|H Chain H, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
pdb|1OXK|J Chain J, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
pdb|1OXK|L Chain L, Complex Between Ypd1 And Sln1 Response Regulator Domain In
Space Group P3(2)
Length = 134
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 21 ITEATNGLQAWKILEDLTN---HIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMS 76
I A +G +A+ +++LT+ + +++ +V MP + G+ L +K++ P++ ++
Sbjct: 29 IELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGL-LSTKMIRRDLGYTSPIVALT 87
Query: 77 SLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLW 109
+ + +CL G FL KPI++ +LK +
Sbjct: 88 AFADDSNIKECLESGMNGFLSKPIKRPKLKTIL 120
>pdb|3N53|A Chain A, Crystal Structure Of A Response Regulator Receiver
Modulated Diguanylate Cyclase From Pelobacter
Carbinolicus
pdb|3N53|B Chain B, Crystal Structure Of A Response Regulator Receiver
Modulated Diguanylate Cyclase From Pelobacter
Carbinolicus
Length = 140
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 60 KIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
K+ K KN+P+I++ S + + L GA D+L KP +N+L
Sbjct: 67 KLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDL 112
>pdb|2R25|B Chain B, Complex Of Ypd1 And Sln1-R1 With Bound Mg2+ And Bef3-
Length = 133
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 21 ITEATNGLQAWKILEDLTN---HIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMS 76
I A +G +A+ +++LT+ + +++ +V MP + G+ L +K++ P++ ++
Sbjct: 30 IELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGL-LSTKMIRRDLGYTSPIVALT 88
Query: 77 SLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLW 109
+ + +CL G FL KPI++ +LK +
Sbjct: 89 AFADDSNIKECLESGMNGFLSKPIKRPKLKTIL 121
>pdb|3CFY|A Chain A, Crystal Structure Of Signal Receiver Domain Of Putative
Luxo Repressor Protein From Vibrio Parahaemolyticus
Length = 137
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 43 LVLTEVMPCLSGVALLSKIMSHKTRKNLP--VIMMSSLDSMGLVFKCLSKGAVDFLVKPI 100
++L +P +SG +L I + ++P VI+ ++ S+ L + KGA DFL KPI
Sbjct: 52 IILDLKLPDMSGEDVLDWI----NQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPI 107
Query: 101 RKNELK 106
+ LK
Sbjct: 108 NADRLK 113
>pdb|3FGZ|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89r
Complexed With Bef3- And Mn2+
pdb|3FGZ|B Chain B, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89r
Complexed With Bef3- And Mn2+
Length = 128
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ EA +G+ A L+ V+++ +MP + G+ LL I + LPV+M+++
Sbjct: 32 VEEAEDGVDALNKLQ--AGGYGFVISDWMMPNMDGLELLKTIRADGAMSALPVLMVTARA 89
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 115
+ GA ++VKP L+ ++ +
Sbjct: 90 KKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>pdb|3NHZ|A Chain A, Structure Of N-Terminal Domain Of Mtra
pdb|3NHZ|B Chain B, Structure Of N-Terminal Domain Of Mtra
pdb|3NHZ|C Chain C, Structure Of N-Terminal Domain Of Mtra
pdb|3NHZ|D Chain D, Structure Of N-Terminal Domain Of Mtra
Length = 125
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 20 VITEATNGLQAWKILEDLTNHIDLVLTEVM-PCLSGVALLSKIMSHKTRKNLPVIMMSSL 78
VI + T L A + L DLVL ++M P ++G+ + + + +P++M+++
Sbjct: 34 VIGDGTQALTAVRELRP-----DLVLLDLMLPGMNGIDVCRVL---RADSGVPIVMLTAK 85
Query: 79 DSMGLVFKCLSKGAVDFLVKPIRKNE 104
V L GA D+++KP + E
Sbjct: 86 TDTVDVVLGLESGADDYIMKPFKPKE 111
>pdb|3I09|A Chain A, Crystal Structure Of A Periplasmic Binding Protein
(Bma2936) From Burkholderia Mallei At 1.80 A Resolution
pdb|3I09|B Chain B, Crystal Structure Of A Periplasmic Binding Protein
(Bma2936) From Burkholderia Mallei At 1.80 A Resolution
Length = 375
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 262 PIKLVGTKKTNRLDLGSSKLSEQIDRGQLDL 292
PI++V N+ D+ +SK E DRG LDL
Sbjct: 44 PIEVVYADHQNKADIAASKAREWXDRGGLDL 74
>pdb|3OLX|A Chain A, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88s-Bef3-Mn Complex
pdb|3OLX|B Chain B, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88s-Bef3-Mn Complex
Length = 129
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M++S + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTSEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|3RVN|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89y
pdb|3RVN|B Chain B, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89y
pdb|3RVO|A Chain A, Structure Of Chey-Mn2+ Complex With Substitutions At 59
And 89: N59d E89y
Length = 132
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 63 MPNMDGLELLKTIRADGAMSALPVLMVTAYAKKENIIAAAQAGASGYVVKPFTAATLEEK 122
Query: 109 WQHVWRR 115
++ +
Sbjct: 123 LNKIFEK 129
>pdb|2PKX|A Chain A, E.Coli Response Regulator Phop Receiver Domain
pdb|2PKX|B Chain B, E.Coli Response Regulator Phop Receiver Domain
pdb|2PL1|A Chain A, Berrylium Fluoride Activated Receiver Domain Of E.Coli
Phop
Length = 121
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 37 LTNHI-DLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVD 94
L HI D+ + ++ +P G++L+ + S+ +LP++++++ +S + LS GA D
Sbjct: 40 LNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADD 97
Query: 95 FLVKPIRKNELKNLWQHVWRR 115
++ KP E+ Q + RR
Sbjct: 98 YVTKPFHIEEVXARXQALXRR 118
>pdb|3FFW|A Chain A, Crystal Structure Of Chey Triple Mutant F14q, N59k, E89y
Complexed With Bef3- And Mn2+
pdb|3FFW|B Chain B, Crystal Structure Of Chey Triple Mutant F14q, N59k, E89y
Complexed With Bef3- And Mn2+
Length = 128
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 21 ITEATNGLQAWKILEDLTNHIDLVLTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLD 79
+ EA +G+ A L+ V+++ MP + G+ LL I + LPV+M+++
Sbjct: 32 VEEAEDGVDALNKLQ--AGGYGFVISDWKMPNMDGLELLKTIRADGAMSALPVLMVTAYA 89
Query: 80 SMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 115
+ GA ++VKP L+ ++ +
Sbjct: 90 KKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>pdb|2CHY|A Chain A, Three-Dimensional Structure Of Chey, The Response
Regulator Of Bacterial Chemotaxis
Length = 128
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|2QR3|A Chain A, Crystal Structure Of The N-Terminal Signal Receiver Domain
Of Two- Component System Response Regulator From
Bacteroides Fragilis
Length = 140
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 68 KNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 105
++LPV++ ++ + L + + +GA DF+VKP +L
Sbjct: 79 RDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQKL 116
>pdb|2FKA|A Chain A, Crystal Structure Of Mg(2+) And Bef(3)(-)-Bound Chey In
Complex With Chez(200-214) Solved From A F432 Crystal
Grown In Caps (Ph 10.5)
pdb|2FLK|A Chain A, Crystal Structure Of Chey In Complex With Chez(200-214)
Solved From A F432 Crystal Grown In Caps (Ph 10.5)
pdb|2FLW|A Chain A, Crystal Structure Of Mg2+ And Bef3- Ound Chey In Complex
With Chez 200-214 Solved From A F432 Crystal Grown In
Hepes (ph 7.5)
pdb|2FMF|A Chain A, Crystal Structure Of Chey In Complex With Chez 200-214
Solved From A F432 Crystal Grown In Hepes (ph 7.5)
pdb|2FMH|A Chain A, Crystal Structure Of Mg2+ And Bef3- Bound Chey In Complex
With Chez 200-214 Solved From A F432 Crystal Grown In
Tris (Ph 8.4)
pdb|2FMI|A Chain A, Crystal Structure Of Chey In Complex With Chez 200-214
Solved From A F432 Crystal Grown In Tris (Ph 8.4)
pdb|2FMK|A Chain A, Crystal Structure Of Mg2+ And Bef3- Bound Chey In Complex
With Chez 200-214 Solved From A P2(1)2(1)2 Crystal Grown
In Mes (Ph 6.0)
Length = 129
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1D4Z|A Chain A, Crystal Structure Of Chey-95iv, A Hyperactive Chey Mutant
Length = 128
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ V GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENVIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|2CHE|A Chain A, Structure Of The Mg2+-Bound Form Of Chey And Mechanism Of
Phosphoryl Transfer In Bacterial Chemotaxis
pdb|2CHF|A Chain A, Structure Of The Mg2+-Bound Form Of Chey And The Mechanism
Of Phosphoryl Transfer In Bacterial Chemotaxis
pdb|2PL9|A Chain A, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
pdb|2PL9|B Chain B, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
pdb|2PL9|C Chain C, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
pdb|2PMC|A Chain A, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
pdb|2PMC|B Chain B, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
pdb|2PMC|C Chain C, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
pdb|2PMC|D Chain D, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
Length = 128
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|3RVJ|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89q
pdb|3RVJ|B Chain B, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89q
pdb|3RVK|A Chain A, Structure Of The Chey-Mn2+ Complex With Substitutions At
59 And 89: N59d E89q
Length = 132
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 63 MPNMDGLELLKTIRADGAMSALPVLMVTAQAKKENIIAAAQAGASGYVVKPFTAATLEEK 122
Query: 109 WQHVWRR 115
++ +
Sbjct: 123 LNKIFEK 129
>pdb|2QXY|A Chain A, Crystal Structure Of A Response Regulator From Thermotoga
Maritima
pdb|2QXY|B Chain B, Crystal Structure Of A Response Regulator From Thermotoga
Maritima
Length = 142
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 24 ATNGLQAWKILEDLTNHIDLVLTEVMPCLSGVALLSKIMSHKTRKNLP---VIMMSSLDS 80
A N +A+ L IDLV +V + L+ +I R+ P V ++S+
Sbjct: 34 AKNEQEAFTFLR--REKIDLVFVDVFEGEESLNLIRRI-----REEFPDTKVAVLSAYVD 86
Query: 81 MGLVFKCLSKGAVDFLVKPIRKNEL 105
L+ + GAVD+++KP R + L
Sbjct: 87 KDLIINSVKAGAVDYILKPFRLDYL 111
>pdb|3RVL|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89r
pdb|3RVL|B Chain B, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89r
pdb|3RVM|A Chain A, Structure Of The Chey-Mn2+ Complex With Substitutions At
59 And 89: N59d And E89r
pdb|3RVR|A Chain A, Structure Of The Cheyn59dE89R MOLYBDATE COMPLEX
pdb|3RVR|B Chain B, Structure Of The Cheyn59dE89R MOLYBDATE COMPLEX
pdb|3RVS|A Chain A, Structure Of The Cheyn59dE89R TUNGSTATE COMPLEX
pdb|3RVS|B Chain B, Structure Of The Cheyn59dE89R TUNGSTATE COMPLEX
Length = 132
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 63 MPNMDGLELLKTIRADGAMSALPVLMVTARAKKENIIAAAQAGASGYVVKPFTAATLEEK 122
Query: 109 WQHVWRR 115
++ +
Sbjct: 123 LNKIFEK 129
>pdb|1JBE|A Chain A, 1.08 A Structure Of Apo-Chey Reveals Meta-Active
Conformation
Length = 128
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|3HEB|A Chain A, Crystal Structure Of Response Regulator Receiver Domain
From Rhodospirillum Rubrum
pdb|3HEB|B Chain B, Crystal Structure Of Response Regulator Receiver Domain
From Rhodospirillum Rubrum
Length = 152
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 43 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIR 101
LVL ++ +P +G+ +L + + + PV+++++ D + +C GA ++ KP+
Sbjct: 62 LVLLDLNLPDXTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVN 121
Query: 102 KNELKN 107
N
Sbjct: 122 YENFAN 127
>pdb|3RVP|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89k
pdb|3RVP|B Chain B, Structure Of The Chey-Bef3 Complex With Substitutions At
59 And 89: N59d And E89k
pdb|3RVQ|A Chain A, Structure Of The Chey-Mn2+ Complex With Substitutions At
59 And 89: N59d E89k
Length = 132
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 63 MPNMDGLELLKTIRADGAMSALPVLMVTAKAKKENIIAAAQAGASGYVVKPFTAATLEEK 122
Query: 109 WQHVWRR 115
++ +
Sbjct: 123 LNKIFEK 129
>pdb|3OLW|A Chain A, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88t-Bef3-Mn Complex
pdb|3OLW|B Chain B, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88t-Bef3-Mn Complex
Length = 129
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTTEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1MIH|A Chain A, A Role For Chey Glu 89 In Chez-Mediated Dephosphorylation
Of The E. Coli Chemotaxis Response Regulator Chey
pdb|1MIH|B Chain B, A Role For Chey Glu 89 In Chez-Mediated Dephosphorylation
Of The E. Coli Chemotaxis Response Regulator Chey
Length = 129
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1ZDM|A Chain A, Crystal Structure Of Activated Chey Bound To Xe
pdb|1ZDM|B Chain B, Crystal Structure Of Activated Chey Bound To Xe
Length = 129
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1E6L|A Chain A, Two-Component Signal Transduction System D13a Mutant Of
Chey
Length = 127
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 58 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 117
Query: 109 WQHVWRR 115
++ +
Sbjct: 118 LNKIFEK 124
>pdb|1C4W|A Chain A, 1.9 A Structure Of A-Thiophosphonate Modified Chey D57c
Length = 128
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|3FFT|A Chain A, Crystal Structure Of Chey Double Mutant F14e, E89r
Complexed With Bef3- And Mn2+
pdb|3FFT|B Chain B, Crystal Structure Of Chey Double Mutant F14e, E89r
Complexed With Bef3- And Mn2+
Length = 128
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTARAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1CEY|A Chain A, Assignments, Secondary Structure, Global Fold, And
Dynamics Of Chemotaxis Y Protein Using Three-And
Four-Dimensional Heteronuclear (13c,15n) Nmr
Spectroscopy
Length = 128
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1EAY|A Chain A, Chey-Binding (P2) Domain Of Chea In Complex With Chey From
Escherichia Coli
pdb|1EAY|B Chain B, Chey-Binding (P2) Domain Of Chea In Complex With Chey From
Escherichia Coli
pdb|1A0O|A Chain A, Chey-Binding Domain Of Chea In Complex With Chey
pdb|1A0O|C Chain C, Chey-Binding Domain Of Chea In Complex With Chey
pdb|1A0O|E Chain E, Chey-Binding Domain Of Chea In Complex With Chey
pdb|1A0O|G Chain G, Chey-Binding Domain Of Chea In Complex With Chey
pdb|1BDJ|A Chain A, Complex Structure Of Hpt Domain And Chey
pdb|1F4V|A Chain A, Crystal Structure Of Activated Chey Bound To The
N-Terminus Of Flim
pdb|1F4V|B Chain B, Crystal Structure Of Activated Chey Bound To The
N-Terminus Of Flim
pdb|1F4V|C Chain C, Crystal Structure Of Activated Chey Bound To The
N-Terminus Of Flim
pdb|1FFG|A Chain A, Chey-Binding Domain Of Chea In Complex With Chey At 2.1 A
Resolution
pdb|1FFG|C Chain C, Chey-Binding Domain Of Chea In Complex With Chey At 2.1 A
Resolution
pdb|1FFS|A Chain A, Chey-Binding Domain Of Chea In Complex With Chey From
Crystals Soaked In Acetyl Phosphate
pdb|1FFS|C Chain C, Chey-Binding Domain Of Chea In Complex With Chey From
Crystals Soaked In Acetyl Phosphate
pdb|1FFW|A Chain A, Chey-Binding Domain Of Chea In Complex With Chey With A
Bound Imido Diphosphate
pdb|1FFW|C Chain C, Chey-Binding Domain Of Chea In Complex With Chey With A
Bound Imido Diphosphate
pdb|1FQW|A Chain A, Crystal Structure Of Activated Chey
pdb|1FQW|B Chain B, Crystal Structure Of Activated Chey
pdb|2B1J|A Chain A, Crystal Structure Of Unphosphorylated Chey Bound To The N-
Terminus Of Flim
pdb|2B1J|B Chain B, Crystal Structure Of Unphosphorylated Chey Bound To The N-
Terminus Of Flim
pdb|1CHN|A Chain A, Magnesium Binding To The Bacterial Chemotaxis Protein Chey
Results In Large Conformational Changes Involving Its
Functional Surface
pdb|3CHY|A Chain A, Crystal Structure Of Escherichia Coli Chey Refined At 1.7-
Angstrom Resolution
pdb|2LP4|Y Chain Y, Solution Structure Of P1-CheyP2 COMPLEX IN BACTERIAL
CHEMOTAXIS
Length = 128
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1DJM|A Chain A, Solution Structure Of Bef3-Activated Chey From Escherichia
Coli
pdb|1KMI|Y Chain Y, Crystal Structure Of An E.Coli Chemotaxis Protein, Chez
Length = 129
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|3OO0|A Chain A, Structure Of Apo Chey A113p
pdb|3OO0|B Chain B, Structure Of Apo Chey A113p
pdb|3OO1|A Chain A, Structure Of E. Coli Chey Mutant A113p In The Absence Of
Sulfate
pdb|3OO1|B Chain B, Structure Of E. Coli Chey Mutant A113p In The Absence Of
Sulfate
Length = 129
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTPATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1EHC|A Chain A, Structure Of Signal Transduction Protein Chey
Length = 128
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|3MYY|A Chain A, Structure Of E. Coli Chey Mutant A113p Bound To Beryllium
Fluoride
pdb|3MYY|B Chain B, Structure Of E. Coli Chey Mutant A113p Bound To Beryllium
Fluoride
Length = 128
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTPATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1E6M|A Chain A, Two-Component Signal Transduction System D57a Mutant Of
Chey
Length = 128
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1E6K|A Chain A, Two-Component Signal Transduction System D12a Mutant Of
Chey
Length = 130
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 61 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 120
Query: 109 WQHVWRR 115
++ +
Sbjct: 121 LNKIFEK 127
>pdb|3FFX|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59r, E89h
Complexed With Bef3- And Mn2+
pdb|3FFX|B Chain B, Crystal Structure Of Chey Triple Mutant F14e, N59r, E89h
Complexed With Bef3- And Mn2+
Length = 128
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAHAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1YMV|A Chain A, Signal Transduction Protein Chey Mutant With Phe 14
Replaced By Gly, Ser 15 Replaced By Gly, And Met 17
Replaced By Gly
Length = 129
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1YMU|A Chain A, Signal Transduction Protein Chey Mutant With Met 17
Replaced By Gly (M17g)
pdb|1YMU|B Chain B, Signal Transduction Protein Chey Mutant With Met 17
Replaced By Gly (M17g)
Length = 130
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 61 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 120
Query: 109 WQHVWRR 115
++ +
Sbjct: 121 LNKIFEK 127
>pdb|1HEY|A Chain A, Investigating The Structural Determinants Of The P21-Like
Triphosphate And Mg2+ Binding Site
Length = 128
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 59 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118
Query: 109 WQHVWRR 115
++ +
Sbjct: 119 LNKIFEK 125
>pdb|1CYE|A Chain A, Three Dimensional Structure Of Chemotactic Che Y Protein
In Aqueous Solution By Nuclear Magnetic Resonance
Methods
Length = 129
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 60 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 119
Query: 109 WQHVWRR 115
++ +
Sbjct: 120 LNKIFEK 126
>pdb|1AB5|A Chain A, Structure Of Chey Mutant F14n, V21t
pdb|1AB5|B Chain B, Structure Of Chey Mutant F14n, V21t
Length = 125
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
MP + G+ LL I + LPV+M+++ + GA ++VKP L+
Sbjct: 56 MPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 115
Query: 109 WQHVWRR 115
++ +
Sbjct: 116 LNKIFEK 122
>pdb|1K66|A Chain A, Crystal Structure Of The Cyanobacterial Phytochrome
Response Regulator, Rcpb
pdb|1K66|B Chain B, Crystal Structure Of The Cyanobacterial Phytochrome
Response Regulator, Rcpb
Length = 149
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 49 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 108
+P G +L +I + K +PV++M++ + + C S ++VKP+ + L
Sbjct: 72 LPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTET 131
Query: 109 WQ 110
Q
Sbjct: 132 VQ 133
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.126 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,999,179
Number of Sequences: 62578
Number of extensions: 549635
Number of successful extensions: 926
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 861
Number of HSP's gapped (non-prelim): 106
length of query: 687
length of database: 14,973,337
effective HSP length: 105
effective length of query: 582
effective length of database: 8,402,647
effective search space: 4890340554
effective search space used: 4890340554
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)